+E	Transcription factors	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Factors - Cellvibrio sp. KY-GH-1</h2>
%<!-- w=600, -->
!
A<b>Eukaryotic type</b>
B  Basic leucine zipper (bZIP)
C    AP-1(-like) components, Jun
C    AP-1(-like) components, Fos
C    AP-1(-like) components, Maf
C    AP-1(-like) components, NF-E2
C    AP-1(-like) components, Fungal regulators
C    AP-1(-like) components, CRE-BP/ATF
C    CREB
C    C/EBP-like factors
C    bZIP/PAR
C    Plant bZIP factors
C    ZIP only
B  Basic helix-loop-helix (bHLH)
C    Ubiquitous (class A) factors
C    Myogenic transcription factors
C    Achaete-Scute
C    Tal/Twist/Atonal/Hen, Lymphoid factors
C    Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C    Tal/Twist/Atonal/Hen, HEN
C    Tal/Twist/Atonal/Hen, Mesp
C    Tal/Twist/Atonal/Hen, Atonal
C    Tal/Twist/Atonal/Hen, Pancreatic factors
C    Hairy, Hairy/E(SPL)
C    Hairy, Fungal regulators
C    Factors with PAS domain
C    Yabby
C    INO
C    HLH domain only
B  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C    Ubiquitous bHLH-ZIP factors
C    Cell cycle controlling factors, Myc
C    Cell cycle controlling factors, Mad/Max
C    Other bHLH-ZIP factors
B  Other basic domains
C    NF-1
C    RF-X
C    AP-2 (bHSH)
B  Zinc finger
C    Cys4 thyroid hormone receptor-like
C    Cys4 hepatocyte nuclear factor 4-like
C    Cys4 estrogen receptor-like
C    Cys4 nerve growth factor IB-like
C    Cys4 Fushi tarazu-F1-like
C    Cys4 germ cell nuclear factor
C    Cys4 Knirps/DAX1-like
C    Cys4 GATA-factors
C    Cys2His2 SP/KLF family and related proteins
C    Cys2His2 GLI-like
C    Cys2His2 Snail
C    Cys2His2 BTB-ZF factors
C    Cys2His2 BED
C    Cys2His2 PRDM
C    Cys2His2 metabolic regulators in fungi
C    Cys2His2 others
C    Cys2HisCys zinc factors
C    Cys3His zinc factors
C    Cys2CysHis zinc factors
C    CXXC CpG-binding proteins
D      D0C16_05655 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      D0C16_17705 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
C    Cys6 metabolic regulators in fungi
C    Other zinc fingers
B  Helix-turn-helix
C    Homeo domain ANTP: HOXL
C    Homeo domain ANTP: NKL
C    Homeo domain Paired-related
C    Homeo domain LIM
C    Homeo domain POU
C    Homeo domain SINE
C    Homeo domain ZF
C    Homeo domain CUT
C    Homeo domain PROS
C    Homeo domain TALE
C    Homeo domain other
C    Fork head/winged helix developmental regulators
C    Fork head/winged helix tissue-specific regulators
C    Fork head/winged helix cell cycle-controlling factors, E2F
C    Fork head/winged helix cell cycle-controlling factors, DP
C    Fork head/winged helix other regulators
C    Heat shock factors
C    Tryptophan clusters Myb, Myb-factors
C    Tryptophan clusters Myb, Myb-like factors
C    Tryptophan clusters Ets-type
C    Tryptophan clusters interferon-regulating factors
C    TEA domain
C    ARID
B  beta-Scaffold factors with minor groove contacts
C    RHR (Rel homology region) Rel/Ankyrin
C    RHR (Rel homology region) Ankyrin only
C    RHR (Rel homology region) NF-AT
C    STAT
C    p53
C    MADS-box regulators of differentiation, MEF-2
C    MADS-box regulators of differentiation, Homeotic genes
C    MADS-box regulators of differentiation, Yeast regulators
C    MADS-box responders to external signals
C    SAND domain-containing proteins
C    TATA-binding proteins
C    HMG SOX
C    HMG TCF-1
C    HMG2-related
C    UBF
C    Other HMG box factors
C    Heteromeric CCAAT factors
C    Grainyhead
C    Cold-shock domain factors, DbpA-like
C    Cold-shock domain factors, YB-1/DbpB-like
C    Cold-shock domain factors, FRG Y2-like
C    Runt
C    MYRF
B  Other transcription factors
C    HMGI(Y)
C    NUPR
E        Line #4
C    Pocket domain Rb
C    Pocket domain CBP
C    T-box
C    DMRT
C    LRRFIP
C    TCP
C    AP2/ERF
C    WRKY
C    LOB
C    Copper-fist proteins fungal regulators
C    Others
#
A<b>Prokaryotic type</b>
B  Helix-turn-helix
C    AraC family
D      D0C16_14755 AraC family transcriptional regulator	K13652 K13652; AraC family transcriptional regulator 
D      D0C16_20735 AraC family transcriptional regulator	K13653 K13653; AraC family transcriptional regulator 
D      D0C16_06265 methylated-DNA--[protein]-cysteine S-methyltransferase	K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] 
C    LysR family
D      D0C16_19510 ilvY; HTH-type transcriptional activator IlvY	K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC 
D      D0C16_07520 LysR family transcriptional regulator	K03576 metR; LysR family transcriptional regulator, regulator for metE and metH 
D      D0C16_13110 hydrogen peroxide-inducible genes activator	K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator 
D      D0C16_16155 hydrogen peroxide-inducible genes activator	K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator 
D      D0C16_02800 cysB; HTH-type transcriptional regulator CysB	K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator 
D      D0C16_10945 LysR family transcriptional regulator	K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator 
C    DeoR family
C    LacI family
D      D0C16_05135 LacI family DNA-binding transcriptional regulator	K02529 galR; LacI family transcriptional regulator, galactose operon repressor 
D      D0C16_10820 LacI family DNA-binding transcriptional regulator	K02529 galR; LacI family transcriptional regulator, galactose operon repressor 
D      D0C16_14200 LacI family DNA-binding transcriptional regulator	K02529 galR; LacI family transcriptional regulator, galactose operon repressor 
D      D0C16_14125 transcriptional regulator CytR	K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG 
D      D0C16_18780 LacI family transcriptional regulator	K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG 
D      D0C16_20830 transcriptional regulator CytR	K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG 
D      D0C16_11990 LacI family DNA-binding transcriptional regulator	K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor 
C    GntR family
C    TetR/AcrR family
D      D0C16_04980 TetR/AcrR family transcriptional regulator	K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor 
D      D0C16_16260 slmA; nucleoid occlusion factor SlmA	K05501 slmA; TetR/AcrR family transcriptional regulator 
D      D0C16_22635 TetR/AcrR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon 
D      D0C16_23850 TetR/AcrR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon 
D      D0C16_16905 TetR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon 
D      D0C16_20015 TetR/AcrR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon 
D      D0C16_20970 TetR/AcrR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon 
D      D0C16_21915 TetR/AcrR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon 
D      D0C16_22080 TetR/AcrR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon 
C    Lrp/AsnC family
D      D0C16_16870 Lrp/AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein 
D      D0C16_04970 Lrp/AsnC family transcriptional regulator	K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator 
C    LuxR family
C    MarR family
C    MerR family
D      D0C16_00805 MerR family transcriptional regulator	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator 
D      D0C16_03520 cueR; Cu(I)-responsive transcriptional regulator	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator 
D      D0C16_02810 MerR family transcriptional regulator	K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator 
C    Fur family
D      D0C16_15400 ferric iron uptake transcriptional regulator	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator 
D      D0C16_16100 transcriptional repressor	K09823 zur; Fur family transcriptional regulator, zinc uptake regulator 
C    IclR family
C    CRP/FNR family
D      D0C16_23310 cAMP-activated global transcriptional regulator CRP	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein 
D      D0C16_11685 cyclic nucleotide-binding domain-containing protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein 
D      D0C16_14610 cyclic nucleotide-binding domain-containing protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein 
D      D0C16_20040 Crp/Fnr family transcriptional regulator	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein 
D      D0C16_06920 fumarate/nitrate reduction transcriptional regulator Fnr	K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein 
C    Rrf2 family
D      D0C16_05270 iscR; Fe-S cluster assembly transcriptional regulator IscR	K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor 
D      D0C16_04485 Rrf2 family transcriptional regulator	K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor 
C    ArsR family
D      D0C16_08110 ArsR family transcriptional regulator	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor 
D      D0C16_17540 ArsR family transcriptional regulator	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor 
D      D0C16_08115 arsenate reductase ArsC	K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] 
D      D0C16_08880 transcriptional regulator	K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator 
C    XRE family
C    PadR family
D      D0C16_24030 PadR family transcriptional regulator	K10947 K10947; PadR family transcriptional regulator 
C    Other families
D      D0C16_18900 MurR/RpiR family transcriptional regulator	K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator 
D      D0C16_23750 BlaI/MecI/CopY family transcriptional regulator	K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor 
D      D0C16_22295 BlaI/MecI/CopY family transcriptional regulator	K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor 
D      D0C16_11290 BlaI/MecI/CopY family transcriptional regulator	K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor 
D      D0C16_19560 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] 
D      D0C16_22700 DNA-binding transcriptional regulator Fis	K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein 
D      D0C16_02635 sigma-54-dependent Fis family transcriptional regulator	K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein 
D      D0C16_16925 PAS domain S-box protein	K12146 hyfR; hydrogenase-4 transcriptional activator 
D      D0C16_16675 norR; nitric oxide reductase transcriptional regulator NorR	K12266 norR; anaerobic nitric oxide reductase transcription regulator 
D      D0C16_01280 PAS domain S-box protein	K15836 fhlA; formate hydrogenlyase transcriptional activator 
D      D0C16_14945 LysR family transcriptional regulator	K02019 modE; molybdate transport system regulatory protein 
D      D0C16_07380 helix-turn-helix domain-containing protein	K07726 K07726; putative transcriptional regulator 
D      D0C16_10455 helix-turn-helix domain-containing protein	K07726 K07726; putative transcriptional regulator 
D      D0C16_17735 helix-turn-helix domain-containing protein	K07726 K07726; putative transcriptional regulator 
D      D0C16_20260 helix-turn-helix domain-containing protein	K07726 K07726; putative transcriptional regulator 
D      D0C16_17745 transcriptional regulator	K07727 K07727; putative transcriptional regulator 
B  Ribbon-helix-helix
C    CopG family
C    Other families
D      D0C16_22570 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] 
B  Other transcription factors
C    BglG family
C    Others
D      D0C16_16990 ParB/RepB/Spo0J family partition protein	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein 
D      D0C16_20255 PspC domain-containing protein	K03973 pspC; phage shock protein C 
D      D0C16_13185 nucleoside diphosphate kinase regulator	K06140 rnk; regulator of nucleoside diphosphate kinase 
D      D0C16_12550 AlpA family phage regulatory protein	K07733 alpA; prophage regulatory protein 
D      D0C16_03045 FMN-binding negative transcriptional regulator	K07734 paiB; transcriptional regulator 
D      D0C16_16455 YqgE/AlgH family protein	K07735 algH; putative transcriptional regulator 
D      D0C16_13695 dksA; RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor 
D      D0C16_09430 nrdR; transcriptional regulator NrdR	K07738 nrdR; transcriptional repressor NrdR 
D      D0C16_11020 AAA family ATPase	K14414 rtcR; transcriptional regulatory protein RtcR 
D      D0C16_11555 mraZ; transcriptional regulator MraZ	K03925 mraZ; transcriptional regulator MraZ 
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: June 7, 2024
#<br>Classification taken and modified from <a href="http://www.gene-regulation.com/pub/databases.html#transfac">TRANSFAC 7.0</a>