+D GENES KO #

  KEGG Orthology (KO) - Chlamydia felis Fe/C-56

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cfe00010] D CF0280 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CF0395 pfkA2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CF0393 pfkA1; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CF0509 dhnA; 1,6-fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CF0695 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CF0890 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CF0943 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CF0110 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CF0051 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CF0336 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CF0529 pdhA; pyruvate dehydrogenase E1 alpha chain K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CF0530 pdhB; pyruvate dehydrogenase E1 beta chain K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CF0531 pdhC; pyruvate dehydrogenase E2 dihydrolipoamide S-acetyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CF0098 pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cfe00020] D CF0587 sucA; oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CF0586 sucB1; 2-oxoglutarate dehydrogenase dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CF0789 sucB2; 2-oxoglutarate dehydrogenase dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CF0230 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CF0229 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CF0045 sdhA; subunit of succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CF0046 sdhB; subunit of succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CF0044 sdhC; subunit of succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CF0267 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CF0282 mdhC; malate dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CF0098 pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CF0529 pdhA; pyruvate dehydrogenase E1 alpha chain K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CF0530 pdhB; pyruvate dehydrogenase E1 beta chain K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CF0531 pdhC; pyruvate dehydrogenase E2 dihydrolipoamide S-acetyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cfe00030] D CF0280 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CF0468 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CF0469 devB; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CF0576 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CF0457 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CF0141 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CF0322 talA; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CF0371 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CF0433 kprS; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CF0509 dhnA; 1,6-fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CF0395 pfkA2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CF0393 pfkA1; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D CF0457 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cfe00051] D CF0662 mrsA2; phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CF0395 pfkA2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CF0393 pfkA1; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CF0509 dhnA; 1,6-fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CF0695 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D CF0395 pfkA2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:cfe00500] D CF0873 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CF0193 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CF0740 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CF0532 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CF0551 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CF0600 glgX; glycogen hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D CF0280 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cfe00520] D CF0225 glmS; glucosamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CF0224 mrsA1; phosphoglucomutase/phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CF0004 glmU; UDP-GlcNAc pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CF0103 uap; UDP-N-acetylglucosamine pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D CF0836 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CF0241 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CF0280 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CF0662 mrsA2; phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CF0873 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cfe00620] D CF0529 pdhA; pyruvate dehydrogenase E1 alpha chain K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CF0530 pdhB; pyruvate dehydrogenase E1 beta chain K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CF0531 pdhC; pyruvate dehydrogenase E2 dihydrolipoamide S-acetyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CF0336 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CF0628 accA; acetyl-coenzyme A carboxylase carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CF0455 accB; acetyl-coenzyme A carboxylase carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CF0454 accC; acetyl-coenzyme A carboxylase carboxyl transferase A subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CF0660 accD; acetyl-coenzyme A carboxylase carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CF0282 mdhC; malate dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CF0267 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CF0098 pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cfe00630] D CF0282 mdhC; malate dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CF0782 glyA; serine/glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CF0648 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:cfe00640] D CF0679 pdhAB; oxoisovalerate dehydrogenase alpha-beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CF0628 accA; acetyl-coenzyme A carboxylase carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CF0455 accB; acetyl-coenzyme A carboxylase carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CF0454 accC; acetyl-coenzyme A carboxylase carboxyl transferase A subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CF0660 accD; acetyl-coenzyme A carboxylase carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CF0229 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CF0230 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D CF0045 sdhA; subunit of succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CF0046 sdhB; subunit of succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CF0044 sdhC; subunit of succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit C 00660 C5-Branched dibasic acid metabolism D CF0229 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CF0230 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D CF0695 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cfe00190] D CF0045 sdhA; subunit of succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CF0046 sdhB; subunit of succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CF0044 sdhC; subunit of succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CF0341 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CF0342 cydB; cytochrome D oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CF0327 atpA; V-type ATP synthase alpha chain K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CF0328 atpB; V-type ATP synthase beta chain K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CF0329 atpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CF0325 atpE; V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CF0330 atpI; V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CF0331 atpK; V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CF0165 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cfe00680] D CF0782 glyA; serine/glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CF0051 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CF0282 mdhC; malate dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CF0509 dhnA; 1,6-fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CF0395 pfkA2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CF0110 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:cfe00920] D CF0167 cysQ; sulfite synthesis/inositol-1-monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CF0813 cysJ; sulfite reductase flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cfe00061] D CF0628 accA; acetyl-coenzyme A carboxylase carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CF0455 accB; acetyl-coenzyme A carboxylase carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CF0454 accC; acetyl-coenzyme A carboxylase carboxyl transferase A subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CF0660 accD; acetyl-coenzyme A carboxylase carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CF0520 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D CF0522 fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CF0523 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CF0163 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CF0521 fabG1; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CF0299 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CF0917 fabZ; 3R-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CF0620 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cfe00561] D CF0204 plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CF0208 plsX; phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CF0168 sga; sn-glycerol-3-p acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CF0834 plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:cfe00564] D CF0102 gpdA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CF0204 plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CF0168 sga; sn-glycerol-3-p acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CF0834 plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CF0832 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CF0235 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CF0087 psdD; phosphatidylserine decarboxylase precursor K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CF0192 pgsA2; CDP-diacylglycerol/glycerol-3-P phosphatydyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CF0881 pgsA1; CDP-diacylglycerol/glycerol-3-P phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cfe00230] D CF0433 kprS; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CF0488 surE; stationary-phase survival acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D BAE81357.1 CF0585; conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CF0427 imdH; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CF0885 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CF0031 hamA; yggv family hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CF0428 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CF0358 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CF0237 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CF0238 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CF0142 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CF0474 adk2; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CF0265 adk1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:cfe00240] D CF0874 pyrF; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CF0961 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CF0885 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BAE81461.1 CF0689; conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CF0407 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CF0833 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CF0488 surE; stationary-phase survival acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CF0603 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CF0237 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CF0238 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CF0500 tdk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CF0659 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cfe00250] D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CF0225 glmS; glucosamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:cfe00260] D CF0305 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D CF0304 asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CF0782 glyA; serine/glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CF0110 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CF0648 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CF0235 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CF0435 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CF0436 trpB1; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cfe00270] D BAE81357.1 CF0585; conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CF0305 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D CF0304 asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CF0282 mdhC; malate dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:cfe00280] D CF0166 gdhA; glutamate/leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D CF0679 pdhAB; oxoisovalerate dehydrogenase alpha-beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cfe00290] D CF0166 gdhA; glutamate/leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:cfe00300] D CF0305 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D CF0304 asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CF0306 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CF0303 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CF0780 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CF0757 aspC; aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CF0632 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CF0147 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cfe00310] D CF0586 sucB1; 2-oxoglutarate dehydrogenase dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CF0789 sucB2; 2-oxoglutarate dehydrogenase dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:cfe00330] D CF0286 ebp04; hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:cfe00380] D CF0434 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D CF0586 sucB1; 2-oxoglutarate dehydrogenase dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CF0789 sucB2; 2-oxoglutarate dehydrogenase dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cfe00400] D CF0748 aroG1; 2-dehydro-3-deoxyphosphooctonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CF0290 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CF0289 aroE; shikimate biosynthesis protein subunit K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D CF0292 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CF0293 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CF0291 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CF0439 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CF0438 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CF0435 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CF0436 trpB1; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D CF0744 phnP2; metal dependent hydrolase of the beta-lactamase superfamily I K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:cfe00450] D CF0951 csdB; selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CF0539 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CF0360 metG; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D CF0782 glyA; serine/glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cfe00470] D CF0153 mudD; MurC/ddl bifunctional enzyme K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CF0149 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CF0780 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:cfe00480] D CF0597 pepA; cytosol leucyl aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CF0576 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CF0468 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:cfe00540] D CF0916 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CF0918 lpxC; UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CF0527 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CF0221 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CF0791 ycaH; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CF0788 kpsF; sugar-phosphate isomerase-like protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CF0985 aroG2; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CF0408 kdtA2; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CF0392 kdtA1; 3-deoxy-manno-octulosonate cytidylyltransferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CF0338 htrB; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cfe00541] D CF0662 mrsA2; phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CF0004 glmU; UDP-GlcNAc pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cfe00550] D CF0836 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CF0241 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CF0153 mudD; MurC/ddl bifunctional enzyme K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CF0149 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CF0632 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CF0147 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CF0831 yaeS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CF0148 mraY; UDP-N-acetylmuramyl pentapeptide phosphotransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CF0152 murG; N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CF0634 ftsI2; cell division related penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CF0937 dacF; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cfe00730] D CF0607 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0109 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0699 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CF0803 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CF0804 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CF0474 adk2; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CF0265 adk1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cfe00740] D CF0119 ribA; riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CF0118 ribD; riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CF0120 ribE; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CF0794 ribC; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CF0545 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CF0803 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CF0490 ubiD; aromatic amino acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:cfe00760] D CF0488 surE; stationary-phase survival acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:cfe00770] D CF0877 yacE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CF0538 acpS; holo-acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:cfe00780] D CF0163 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CF0521 fabG1; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CF0299 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CF0917 fabZ; 3R-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CF0620 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CF0297 bioF2; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CF0170 bioF1; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CF0295 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CF0296 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CF0298 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CF0113 birA; biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cfe00785] D CF0080 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CF0884 lplA1; lipoate protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CF0651 lplA2; lipoate protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CF0529 pdhA; pyruvate dehydrogenase E1 alpha chain K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CF0530 pdhB; pyruvate dehydrogenase E1 beta chain K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CF0531 pdhC; pyruvate dehydrogenase E2 dihydrolipoamide S-acetyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CF0587 sucA; oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CF0586 sucB1; 2-oxoglutarate dehydrogenase dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CF0789 sucB2; 2-oxoglutarate dehydrogenase dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CF0679 pdhAB; oxoisovalerate dehydrogenase alpha-beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CF0648 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cfe00790] D CF0013 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CF0014 folP; folate synthesis bifunctional protein K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D CF0015 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CF0016 oxr1; oxidoreductase K22099 folC2; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CF0119 ribA; riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CF0437 trpF; N-(5'-phosphoribosyl) anthranilate isomerase K22100 trpF; 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one isomerase/dehydratase [EC:4.2.1.160] C 00670 One carbon pool by folate [PATH:cfe00670] D CF0015 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CF0559 folD; bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CF0782 glyA; serine/glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CF0915 fmt; methionyl tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CF0019 ygfA; formyltetrahydrofolate cycloligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cfe00860] D CF0824 gltX; glutamyl tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CF0977 hemA; glutamyl tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CF0374 gsa; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CF1005 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CF0666 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D BAE81555.1 CF0783; conserved hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CF0138 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CF0137 hemN1; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CF0136 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CF0869 hemZ; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cfe00130] D CF0491 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CF0490 ubiD; aromatic amino acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CF0778 rrm9; tRNA/rRNA methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D BAE81548.1 CF0776; conserved hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D CF0159 oxr4; thiamine biosynthesis enzyme ThiH K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cfe00900] D CF0699 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CF0566 yaeM; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CF0845 yacM; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CF0199 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CF0812 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CF0584 gcpE; 1-hydroxy-2-methyl-2-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CF0272 lytB; penicillin tolerance metalloproteinase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CF0490 ubiD; aromatic amino acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CF0003 ispA; geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CF0831 yaeS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CF0141 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:cfe00261] D CF0305 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D CF0304 asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CF0306 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CF0303 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CF0522 fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CF0521 fabG1; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CF0299 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CF0620 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CF0520 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CF0289 aroE; shikimate biosynthesis protein subunit K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D CF0553 oxr2; oxidoreductase K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D CF0490 ubiD; aromatic amino acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cfe03020] D CF0320 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CF0321 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CF0892 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cfe03010] D CF0540 rps1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CF0959 rps2; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CF0907 rps3; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CF0995 rps4; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CF0897 rps5; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CF0196 rps6; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CF0816 rps7; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CF0900 rps8; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CF0476 rps9; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CF0814 rps10; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CF0893 rps11; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CF0817 rps12; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CF0894 rps13; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CF0181 rps14; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CF0253 rps15; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CF0354 rps16; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CF0904 rps17; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CF0197 rps18; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CF0909 rps19; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CF0009 rps20; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CF0681 rps21; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CF0317 rpl1; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CF0910 rpl2; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CF0913 rpl3; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CF0912 rpl4; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CF0901 rpl5; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CF0899 rpl6; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CF0198 rpl9; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CF0318 rpl10; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CF0316 rpl11; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CF0477 rpl13; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CF0903 rpl14; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CF0896 rpl15; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CF0906 rpl16; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CF0891 rpl17; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CF0898 rpl18; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CF0356 rpl19; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CF0245 rpl20; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CF0810 rpl21; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CF0908 rpl22; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CF0911 rpl23; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CF0902 rpl24; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CF0194 rpl25; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CF0809 rpl27; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CF0552 rpl28; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CF0905 rpl29; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CF0350 rpl31; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CF0207 rpl32; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CF0179 rpl34; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CF0244 rpl35; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CF0180 rpl36; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CF16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CF23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CF5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cfe00970] D CFtRNA38 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CFtRNA16 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CFtRNA37 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CFtRNA23 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CFtRNA28 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CFtRNA02 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CFtRNA13 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CFtRNA21 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CFtRNA05 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CFtRNA06 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CFtRNA34 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CFtRNA33 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CFtRNA03 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CFtRNA04 tRNA-His K14226 tRNA-His; tRNA His D CFtRNA17 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CFtRNA09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA29 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA35 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CFtRNA10 tRNA-Met K14230 tRNA-Met; tRNA Met D CFtRNA15 tRNA-Met K14230 tRNA-Met; tRNA Met D CFtRNA14 tRNA-Met K14230 tRNA-Met; tRNA Met D CFtRNA26 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CFtRNA01 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CFtRNA22 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CFtRNA08 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CFtRNA25 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CFtRNA30 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CFtRNA24 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CFtRNA36 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CFtRNA11 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CFtRNA19 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CFtRNA12 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CFtRNA18 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CFtRNA07 tRNA-Val K14237 tRNA-Val; tRNA Val D CFtRNA20 tRNA-Val K14237 tRNA-Val; tRNA Val D CF0824 gltX; glutamyl tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CF0715 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CF0714 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CF0716 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CF0140 alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CF0927 aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CF0191 glyQ; glycyl tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CF0057 thrS; threoninyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CF0117 serS; seryl tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CF0175 cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CF0360 metG; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CF0915 fmt; methionyl tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CF0333 valS; valyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CF0391 leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CF0347 ileS; isoleucyl tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CF0174 lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CF0835 argS; arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CF0762 proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CF0928 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CF0246 pheS; phenylalaninyl tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CF0860 pheT; phenylalaninyl tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CF0577 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CF0053 trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cfe03060] D CF0895 secY; preprotein translocase SecY chain K03076 secY; preprotein translocase subunit SecY D CF0314 secE; preprotein translocase SecE chain K03073 secE; preprotein translocase subunit SecE D BAE81465.1 CF0693; conserved hypothetical protein K03075 secG; preprotein translocase subunit SecG D CF0828 secDF; protein export proteins SecD/SecF fusion K12257 secDF; SecD/SecF fusion protein D CF0131 yajC; preprotein translocase K03210 yajC; preprotein translocase subunit YajC D CF0535 imp1; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CF0089 secA1; preprotein translocase secA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CF0353 ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CF0228 ftsY; cell division related signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D CF0348 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CF0797 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cfe04122] D CF0607 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0109 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0653 rrm8; tRNA/rRNA methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:cfe03018] D CF0051 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CF0252 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CF0766 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CF0876 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CF0395 pfkA2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CF0765 dnaK; heat shock protein HSP70 cofactor K04043 dnaK; molecular chaperone DnaK D CF0365 groL3; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0033 groL1; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0092 pcnB1; poly (A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CF0222 pcnB2; Poly (A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cfe03030] D CF0921 dnaQ2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0624 dnaQ1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0931 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CF0671 dnaX2; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CF0499 dnaX1; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BAE81366.1 CF0594; conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CF0562 dnaN; DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CF0882 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BAE81780.1 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CF0186 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CF0598 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CF0357 rnhB1; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CF0709 rnhB2; ribonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CF0387 dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cfe03410] D CF0085 nth; enodnuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CF0029 ung; DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CF0616 mutY; adenine/guanine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CF0767 mag; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CF0993 mviN; virulence factor mviN K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CF0827 recJ; Mg-dependent 5'-3' ssDNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CF0387 dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cfe03420] D CF0139 mfd; transcription-repair coupling factor-superfamily II helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CF0335 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CF0052 uvrB; excision nuclease helicase subunit B K03702 uvrB; excinuclease ABC subunit B D CF0184 uvrC; excinuclease ABC complex nuclease subunit C K03703 uvrC; excinuclease ABC subunit C D CF0028 uvrD; DNA/RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CF0387 dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cfe03430] D CF0185 mutS; DNAmismatch repair ATPases K03555 mutS; DNA mismatch repair protein MutS D CF0063 mutL; methyl-directed DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D CF0028 uvrD; DNA/RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CF0696 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CF0697 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CF0827 recJ; Mg-dependent 5'-3' ssDNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CF0598 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CF0931 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CF0562 dnaN; DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CF0671 dnaX2; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CF0499 dnaX1; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BAE81366.1 CF0594; conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CF0921 dnaQ2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0624 dnaQ1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0387 dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cfe03440] D CF0827 recJ; Mg-dependent 5'-3' ssDNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CF0598 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CF0563 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF D BAE81627.1 CF0855; conserved hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D CF0524 recR; recombination and repair K06187 recR; recombination protein RecR D CF0018 recA; mediator of ATP dependent DNA homologous recombination K03553 recA; recombination protein RecA D CF0886 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D CF0602 ruvB; holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CF0887 ruvC; holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CF0999 recB; ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D BAE81770.1 CF0997; conserved hypothetical protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CF0361 recD2; ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CF0007 recD1; ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CF0931 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CF0562 dnaN; DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CF0671 dnaX2; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CF0499 dnaX1; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BAE81366.1 CF0594; conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CF0921 dnaQ2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0624 dnaQ1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0171 priA; replication factor Y superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus D CF0203 ide2; insulinase family metalloproteinase K01408 IDE; insulysin [EC:3.4.24.56] D CF0202 ide1; insulinase family metalloproteinase K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cfe02010] D BAE81149.1 CF0377; hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CF0375 abc1; ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CF0376 abc2; ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CF0746 artJ; ABC transporter of amino acids K09996 artJ; arginine transport system substrate-binding protein D CF0464 glnP; ABC transporter of amino acids K17077 artQ; arginine/lysine/histidine transport system permease protein D CF0463 glnQ; ABC transporter of amino acids K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CF0505 omp05; outer membrane protein K02073 metQ; D-methionine transport system substrate-binding protein D CF0506 app; ABC transporter K02072 metI; D-methionine transport system permease protein D CF0507 dppF2; ABC transporter of dipeptides K02071 metN; D-methionine transport system ATP-binding protein D CF0467 oppA3; ABC transporter/periplasmic oligopeptide binding lipoprotein component K15580 oppA; oligopeptide transport system substrate-binding protein D CF0402 oppB2; ABC transporter of peptides K15581 oppB; oligopeptide transport system permease protein D CF0401 oppC2; ABC transporter of peptides K15582 oppC; oligopeptide transport system permease protein D CF0399 oppF; ABC transporter of peptides K15583 oppD; oligopeptide transport system ATP-binding protein D CF0400 oppD; ABC transporter of peptides K10823 oppF; oligopeptide transport system ATP-binding protein D CF0805 adhS2; ABC transporter/periplasmic Mn/Zn-binding protein K09815 znuA; zinc transport system substrate-binding protein D CF0807 yebI; ABC transporter of metals K09816 znuB; zinc transport system permease protein D CF0806 yebM; ABC transporter of metals K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D BAE81342.1 CF0571; conserved hypothetical protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CF0568 ytgC; ABC transporter of metals K11708 troC; manganese/zinc/iron transport system permease protein D CF0567 ytgD; ABC transporter of metals K11709 troD; manganese/zinc/iron transport system permease protein D CF0569 ytgB1; ABC transporter of metals K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CF0309 bioY; biotin synthase K03523 bioY; biotin transport system substrate-specific component D CF0481 abc1; ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein D CF0480 ycfV; ABC transporter of lipoproteins K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D BAE81021.1 CF0249; conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D BAE81020.1 CF0248; conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D CF0987 yhbG; ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:cfe02060] D CF0673 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CF0674 ptsH; phosphotransferase system histidine-containing protein HPr K02784 ptsH; phosphocarrier protein HPr D CF0657 ptsN1; phosphotransferase system mannitol/fructose-specific Pts IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CF0658 ptsN2; phosphotransferase system mannitol/fructose-specific Pts IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cfe03070] D CF0965 yscC; type III secretion general secretion pathway protein D K03219 yscC; type III secretion protein C D CF0549 lcrE; low calcium response protein E K04058 yscW; type III secretion protein W D CF0079 fliF1; type III secretion flagellar biosynthesis M-ring protein K03222 yscJ; type III secretion protein J D CF0076 fliP; type III secretion flagellar biosynthesis inner membrane protein K03226 yscR; type III secretion protein R D CF0075 fliQ; type III secretion flagellar biosynthesis inner membrane protein K03227 yscS; type III secretion protein S D CF0074 fliR; type III secretion flagellar biosynthesis inner membrane protein K03228 yscT; type III secretion protein T D CF0547 yscU; type III secretory flagellar biosynthesis Yop translocation protein U K03229 yscU; type III secretion protein U D CF0548 lcrD; type III secretory flagellar biosynthesis K03230 yscV; type III secretion protein V D CF0970 fliI1; type III secretory flagellar biosynthesis ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CF0077 fliO; type III secretion flagellar biosynthesis translocase K03223 yscL; type III secretion protein L D CF0066 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D CF0068 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D CF0067 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CF0828 secDF; protein export proteins SecD/SecF fusion K12257 secDF; SecD/SecF fusion protein D CF0314 secE; preprotein translocase SecE chain K03073 secE; preprotein translocase subunit SecE D BAE81465.1 CF0693; conserved hypothetical protein K03075 secG; preprotein translocase subunit SecG D CF0895 secY; preprotein translocase SecY chain K03076 secY; preprotein translocase subunit SecY D CF0131 yajC; preprotein translocase K03210 yajC; preprotein translocase subunit YajC D CF0535 imp1; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CF0089 secA1; preprotein translocase secA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CF0228 ftsY; cell division related signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D CF0353 ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:cfe02020] D CF0231 htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CF0579 rpoF; DNA-directed RNA polymerase sigma 28 K02405 fliA; RNA polymerase sigma factor FliA D CF0639 dnaA2; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CF0534 dnaA1; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CF0930 uhpC; hexosphosphate transport K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CF0850 atoS; nitrogen regulation two-component sensor histidine kinase ntrB K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CF0852 atoC; nitrogen regulation two-component transcription regulatory protein K07714 atoC; two-component system, NtrC family, response regulator AtoC D CF0027 rpoN; DNA-directed RNA polymerase sigma 54 K03092 rpoN; RNA polymerase sigma-54 factor D CF0519 cpkR; cAMP-dependent protein kinase regulatory chain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CF0341 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CF0342 cydB; cytochrome D oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cfe02024] D CF0510 xasA; amino acid antiporter K20265 gadC; glutamate:GABA antiporter D CF0519 cpkR; cAMP-dependent protein kinase regulatory chain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CF0118 ribD; riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CF0467 oppA3; ABC transporter/periplasmic oligopeptide binding lipoprotein component K15580 oppA; oligopeptide transport system substrate-binding protein D CF0402 oppB2; ABC transporter of peptides K15581 oppB; oligopeptide transport system permease protein D CF0401 oppC2; ABC transporter of peptides K15582 oppC; oligopeptide transport system permease protein D CF0399 oppF; ABC transporter of peptides K15583 oppD; oligopeptide transport system ATP-binding protein D CF0400 oppD; ABC transporter of peptides K10823 oppF; oligopeptide transport system ATP-binding protein D CF0403 oppA2; ABC transporter/periplasmic oligopeptide binding lipoprotein component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CF0404 oppA5; ABC transporter/periplasmic oligopeptide binding lipoprotein component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CF0405 oppA4; ABC transporter/periplasmic oligopeptide binding lipoprotein component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CF0865 oppA1; ABC transporter periplasmic oligopeptide binding lipoprotein component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CF0864 oppB1; ABC transporter of peptides K02033 ABC.PE.P; peptide/nickel transport system permease protein D CF0863 oppC1; ABC transporter of peptides K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CF0946 dppD; ABC transporter of dipeptides K02031 ddpD; peptide/nickel transport system ATP-binding protein D CF0947 dppF1; ABC transporter of dipeptides K02032 ddpF; peptide/nickel transport system ATP-binding protein D CF0535 imp1; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CF0828 secDF; protein export proteins SecD/SecF fusion K12257 secDF; SecD/SecF fusion protein D CF0314 secE; preprotein translocase SecE chain K03073 secE; preprotein translocase subunit SecE D BAE81465.1 CF0693; conserved hypothetical protein K03075 secG; preprotein translocase subunit SecG D CF0895 secY; preprotein translocase SecY chain K03076 secY; preprotein translocase subunit SecY D CF0131 yajC; preprotein translocase K03210 yajC; preprotein translocase subunit YajC D CF0089 secA1; preprotein translocase secA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CF0228 ftsY; cell division related signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D CF0353 ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D CF0967 fliN; type III secretion flagellar motor switch domain K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:cfe02040] D CF0107 fliF2; type III secretion flagellar biosynthesis M-ring protein K02409 fliF; flagellar M-ring protein FliF D CF0106 fliH; type III secretory flagellar biosynthesis K02411 fliH; flagellar assembly protein FliH D CF0105 fliI2; type III secretory flagellar biosynthesis ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CF0967 fliN; type III secretion flagellar motor switch domain K02417 fliN; flagellar motor switch protein FliN D CF0580 flhA; type III secretory flagellar biosynthesis K02400 flhA; flagellar biosynthesis protein FlhA D CF0012 rpoD; DNA-directed RNA polymerase sigma 70 K03086 rpoD; RNA polymerase primary sigma factor D CF0027 rpoN; DNA-directed RNA polymerase sigma 54 K03092 rpoN; RNA polymerase sigma-54 factor D CF0579 rpoF; DNA-directed RNA polymerase sigma 28 K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CF0051 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cfe01501] D CF0467 oppA3; ABC transporter/periplasmic oligopeptide binding lipoprotein component K15580 oppA; oligopeptide transport system substrate-binding protein D CF0402 oppB2; ABC transporter of peptides K15581 oppB; oligopeptide transport system permease protein D CF0401 oppC2; ABC transporter of peptides K15582 oppC; oligopeptide transport system permease protein D CF0399 oppF; ABC transporter of peptides K15583 oppD; oligopeptide transport system ATP-binding protein D CF0400 oppD; ABC transporter of peptides K10823 oppF; oligopeptide transport system ATP-binding protein D CF0634 ftsI2; cell division related penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cfe01502] D CF0153 mudD; MurC/ddl bifunctional enzyme K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CF0147 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CF0148 mraY; UDP-N-acetylmuramyl pentapeptide phosphotransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CF0152 murG; N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cfe01503] D CF0631 ami1; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CF0231 htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CF0916 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cfe01000] C 01001 Protein kinases [BR:cfe01001] D CF0334 pkn1; serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CF0935 rsbW; regulator of sigma subunit-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CF0850 atoS; nitrogen regulation two-component sensor histidine kinase ntrB K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cfe01009] D CF0395 pfkA2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CF0608 pp2C; PP2C-like serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cfe01002] D CF0797 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CF0428 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CF0225 glmS; glucosamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BAE81386.1 CF0614; conserved hypothetical protein K07052 K07052; CAAX protease family protein D CF0367 pepF; oligopeptidase F/B K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D CF0203 ide2; insulinase family metalloproteinase K01408 IDE; insulysin [EC:3.4.24.56] D CF0202 ide1; insulinase family metalloproteinase K01408 IDE; insulysin [EC:3.4.24.56] D CF0233 ide3; insulinase family metalloproteinase K06972 PITRM1; presequence protease [EC:3.4.24.-] D CF0597 pepA; cytosol leucyl aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CF0262 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CF0064 pepP; aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CF0251 ftsH; cell division related ATP-dependent zinc proteinase Clp K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CF0565 yaeL; membrane-associated Zn-dependent proteases K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CF0231 htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CF0937 dacF; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CF0094 clpP2; ATP-dependent Clp endopeptidase, ATP-binding proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CF0781 clpP1; ATP-dependent Clp endopeptidase ATP-binding proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CF0684 lon; lon/ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CF0348 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CF0819 tsp; cell division related penicillin-binding proteinase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:cfe01003] D CF0193 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cfe01005] D CF0916 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CF0221 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CF0918 lpxC; UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CF0527 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CF0791 ycaH; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CF0338 htrB; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CF0392 kdtA1; 3-deoxy-manno-octulosonate cytidylyltransferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CF0985 aroG2; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CF0408 kdtA2; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CF0788 kpsF; sugar-phosphate isomerase-like protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cfe01011] D CF0836 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CF0241 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CF0153 mudD; MurC/ddl bifunctional enzyme K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CF0149 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CF0632 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CF0148 mraY; UDP-N-acetylmuramyl pentapeptide phosphotransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CF0152 murG; N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CF0994 nfo; endonuclease IV K03980 murJ; putative peptidoglycan lipid II flippase D CF0634 ftsI2; cell division related penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CF0937 dacF; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CF0631 ami1; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cfe01004] D CF0522 fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CF0523 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CF0163 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CF0521 fabG1; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CF0299 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CF0917 fabZ; 3R-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CF0620 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CF0204 plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CF0208 plsX; phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CF0168 sga; sn-glycerol-3-p acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CF0834 plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cfe01006] D CF0003 ispA; geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CF0831 yaeS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CF0158 miaA; tRNA delta 2-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CF0491 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:cfe01007] D CF0824 gltX; glutamyl tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CF0577 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CF0053 trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CF0175 cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CF0835 argS; arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CF0360 metG; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CF0347 ileS; isoleucyl tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CF0333 valS; valyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CF0391 leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CF0174 lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CF0927 aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CF0928 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CF0117 serS; seryl tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CF0762 proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CF0057 thrS; threoninyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CF0140 alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CF0246 pheS; phenylalaninyl tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CF0860 pheT; phenylalaninyl tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CF1001 tyrB; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CF0757 aspC; aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CF0297 bioF2; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CF0170 bioF1; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CF0295 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CF0374 gsa; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cfe03000] D CF0519 cpkR; cAMP-dependent protein kinase regulatory chain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CF0113 birA; biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CF0440 trpR; transcription factor/trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D CF0948 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CF0465 argR; transciption factor/arginine operon repressor K03402 argR; transcriptional regulator of arginine metabolism D CF0763 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D CF0373 yqgE; transcription regulator K07735 algH; putative transcriptional regulator D CF0796 dksA; dnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D BAE81567.1 CF0795; conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:cfe03021] D CF0892 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CF0320 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CF0321 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CF0012 rpoD; DNA-directed RNA polymerase sigma 70 K03086 rpoD; RNA polymerase primary sigma factor D CF0027 rpoN; DNA-directed RNA polymerase sigma 54 K03092 rpoN; RNA polymerase sigma-54 factor D CF0579 rpoF; DNA-directed RNA polymerase sigma 28 K02405 fliA; RNA polymerase sigma factor FliA D CF0541 nusA; N utilization protein A K02600 nusA; transcription termination/antitermination protein NusA D CF0242 nusB; N utilization protein B K03625 nusB; transcription antitermination protein NusB D CF0315 nusG; transcription antitermination K02601 nusG; transcription termination/antitermination protein NusG D CF0050 rbsU; sigma regulatory RsbW antagonist K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D CF0773 rsbV1; anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist D CF0935 rsbW; regulator of sigma subunit-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CF0796 dksA; dnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D CF0876 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cfe03019] D CF0205 cafE; ribonuclease G/E K08301 rng; ribonuclease G [EC:3.1.26.-] D CF0664 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CF0766 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CF0051 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CF0252 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CF0876 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CF0395 pfkA2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta chain K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CF0765 dnaK; heat shock protein HSP70 cofactor K04043 dnaK; molecular chaperone DnaK D CF0365 groL3; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0033 groL1; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0092 pcnB1; poly (A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CF0222 pcnB2; Poly (A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:cfe03011] D CF0540 rps1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CF0959 rps2; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CF0907 rps3; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CF0995 rps4; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CF0897 rps5; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CF0196 rps6; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CF0816 rps7; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CF0900 rps8; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CF0476 rps9; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CF0814 rps10; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CF0893 rps11; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CF0817 rps12; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CF0894 rps13; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CF0181 rps14; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CF0253 rps15; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CF0354 rps16; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CF0904 rps17; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CF0197 rps18; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CF0909 rps19; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CF0009 rps20; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CF0681 rps21; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CF0317 rpl1; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CF0910 rpl2; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CF0913 rpl3; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CF0912 rpl4; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CF0901 rpl5; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CF0899 rpl6; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CF0198 rpl9; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CF0318 rpl10; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CF0316 rpl11; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CF0477 rpl13; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CF0903 rpl14; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CF0896 rpl15; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CF0906 rpl16; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CF0891 rpl17; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CF0898 rpl18; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CF0356 rpl19; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CF0245 rpl20; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CF0810 rpl21; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CF0908 rpl22; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CF0911 rpl23; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CF0902 rpl24; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CF0809 rpl27; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CF0552 rpl28; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CF0905 rpl29; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CF0350 rpl31; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CF0207 rpl32; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CF0179 rpl34; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CF0244 rpl35; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CF0180 rpl36; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CF0194 rpl25; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CF5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CF16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CF23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cfe03009] D CF0664 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CF0808 yhbZ; GTP-binding protein, GTP1 K03979 obgE; GTPase [EC:3.6.5.-] D CF0796 dksA; dnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D CF0541 nusA; N utilization protein A K02600 nusA; transcription termination/antitermination protein NusA D CF0242 nusB; N utilization protein B K03625 nusB; transcription antitermination protein NusB D CF0315 nusG; transcription antitermination K02601 nusG; transcription termination/antitermination protein NusG D CF0700 kgsA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CF0939 rrm14; tRNA/rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CF0871 rrm12; tRNA/rRNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CF0636 rrm7; tRNA/rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CF0593 rrm6; tRNA/rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CF0793 rrm11; tRNA/rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CF0111 rsuB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CF0617 rsuC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CF0982 rsuD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BAE81254.1 CF0482; conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CF0205 cafE; ribonuclease G/E K08301 rng; ribonuclease G [EC:3.1.26.-] D BAE81178.1 CF0406; conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CF0091 engA; GTP-binding GTPase K03977 engA; GTPase D CF0743 hflX; GTP-binding protein K03665 hflX; GTPase D CF0496 ywlC; translation factor SUA5 family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CF0543 rbfA; ribosome binding factor A K02834 rbfA; ribosome-binding factor A D CF0162 ybeB; chloroplast development gene iojAP superfamily K09710 ybeB; ribosome-associated protein D BAE81543.1 CF0771; conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D CF0546 ychF; GTP binding protein K06942 ychF; ribosome-binding ATPase D BAE80978.1 CF0206; conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cfe03016] D CF0686 atsA; metal-dependent hydrolase of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CF0824 gltX; glutamyl tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CF0762 proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CF0347 ileS; isoleucyl tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CF0391 leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CF0360 metG; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CF0835 argS; arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CF0174 lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CF0927 aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CF0140 alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CF0057 thrS; threoninyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CF0117 serS; seryl tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CF0175 cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CF0333 valS; valyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CF0928 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CF0246 pheS; phenylalaninyl tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CF0860 pheT; phenylalaninyl tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CF0577 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CF0053 trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CF0753 ycfF; bis (5'-nucleosyl)-tetraphosphatase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CF0239 rrm2; tRNA/rRNA methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CF0846 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CF0544 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CF0607 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0109 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0496 ywlC; translation factor SUA5 family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CF0158 miaA; tRNA delta 2-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CF0086 thdF; tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CF0883 gidA; glucose inhibited division protein NAD/FAD-dependent oxidoreductase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CF0167 cysQ; sulfite synthesis/inositol-1-monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CF0178 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CF0191 glyQ; glycyl tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CF0254 yfhC; cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CF0024 oxr3; dehydrogenases K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D BAE81514.1 CF0742; conserved hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D CF0355 rrm5; tRNA/rRNA methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CF0925 rrm13; tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CF0792 rrm10; tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CF0653 rrm8; tRNA/rRNA methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CF0487 ydaO; PP-loop type ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CF0419 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CF0250 mesJ; PP-loop superfamily ATPase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CF0466 gcp2; o-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D BAE81694.1 CF0922; hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CF0766 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CF0252 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cfe03012] D CF0542 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CF0243 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CF0960 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CF0313 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D CF0815 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G D CF0351 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1 D CF0962 rrf; ribosome recycling factor K02838 frr; ribosome recycling factor D CF0352 rrm4; tRNA/rRNA methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CF0195 pth; tRNA hydrolase peptidyl K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CF0312 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CF0143 efp2; translation elongation factor P2 K02356 efp; elongation factor P D CF0456 efp1; translation elongation factor P1 K02356 efp; elongation factor P D BAE81613.1 CF0842; hypothetical protein K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:cfe03110] D CF0378 clpB1; ATP-dependent Clp endopeptidase ATP-binding chain B K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CF0652 clpB2; ATP-dependent Clp endopeptidase ATP-binding chain B K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CF0093 clpX; ATP-dependent Clp endopeptidase ATP-binding, ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CF0765 dnaK; heat shock protein HSP70 cofactor K04043 dnaK; molecular chaperone DnaK D CF0365 groL3; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0033 groL1; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0680 dnaJ; heat shock protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D CF0764 grpE; heat shock protein HSP70 cofactor K03687 GRPE; molecular chaperone GrpE D CF0366 groS; heat shock protein HSP10 subunit K04078 groES; chaperonin GroES D CF0231 htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CF0251 ftsH; cell division related ATP-dependent zinc proteinase Clp K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CF0924 trxA3; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cfe04131] D CF0885 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CF0890 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CF0110 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CF0336 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:cfe03032] D CF0630 himD; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta D CF0639 dnaA2; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CF0534 dnaA1; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CF0882 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BAE81780.1 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CF0186 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CF0598 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CF0931 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CF0562 dnaN; DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BAE81366.1 CF0594; conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CF0921 dnaQ2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0624 dnaQ1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0671 dnaX2; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CF0499 dnaX1; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CF0357 rnhB1; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CF0709 rnhB2; ribonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CF0387 dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CF0979 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CF0501 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CF0978 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CF0502 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CF0025 topA; DNA topoisomerase I-fused to SWI domain K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cfe03036] D CF0664 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CF0630 himD; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta D CF0639 dnaA2; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CF0534 dnaA1; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CF0634 ftsI2; cell division related penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CF0127 ftsK; cell division related Stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CF0151 ftsW; cell division related rod shape-determining membrane protein K03588 ftsW; cell division protein FtsW D CF0631 ami1; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CF0097 mreB; HSP70 class molecular chaperones K03569 mreB; rod shape-determining protein MreB and related proteins D CF0114 rodA; cell division related rod shape-determining membrane protein K05837 rodA; rod shape determining protein RodA D CF0056 parA; chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D BAE81784.1 pCF07; ParA family protein K03496 parA; chromosome partitioning protein D CF0948 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CF0883 gidA; glucose inhibited division protein NAD/FAD-dependent oxidoreductase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CF0687 xerC; integrase/recombinase K03733 xerC; integrase/recombinase XerC D CF0279 xerD; integrase/recombinase K04763 xerD; integrase/recombinase XerD D BAE81779.1 pCF02; integrase K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:cfe03400] D CF0862 ada; methylated-DNA--protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CF0029 ung; DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CF0767 mag; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CF0616 mutY; adenine/guanine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CF0085 nth; enodnuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CF0659 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CF0993 mviN; virulence factor mviN K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CF0827 recJ; Mg-dependent 5'-3' ssDNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CF0387 dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CF0335 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CF0052 uvrB; excision nuclease helicase subunit B K03702 uvrB; excinuclease ABC subunit B D CF0184 uvrC; excinuclease ABC complex nuclease subunit C K03703 uvrC; excinuclease ABC subunit C D CF0028 uvrD; DNA/RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CF0320 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CF0321 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CF0892 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CF0139 mfd; transcription-repair coupling factor-superfamily II helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CF0185 mutS; DNAmismatch repair ATPases K03555 mutS; DNA mismatch repair protein MutS D CF0063 mutL; methyl-directed DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D CF0696 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CF0697 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CF0931 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CF0562 dnaN; DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BAE81366.1 CF0594; conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CF0921 dnaQ2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0624 dnaQ1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CF0671 dnaX2; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CF0499 dnaX1; DNA polymerase III gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CF0598 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CF0999 recB; ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D BAE81770.1 CF0997; conserved hypothetical protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CF0361 recD2; ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CF0007 recD1; ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CF0018 recA; mediator of ATP dependent DNA homologous recombination K03553 recA; recombination protein RecA D CF0886 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D CF0602 ruvB; holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CF0887 ruvC; holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CF0171 priA; replication factor Y superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CF0665 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms D CF0563 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF D BAE81627.1 CF0855; conserved hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D CF0524 recR; recombination and repair K06187 recR; recombination protein RecR D CF0979 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CF0501 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CF0978 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CF0502 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CF0025 topA; DNA topoisomerase I-fused to SWI domain K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CF0630 himD; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta D CF0237 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CF0238 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cfe03029] D CF0542 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CF0243 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CF0960 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CF0313 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D CF0815 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G D CF0577 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CF0391 leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CF0927 aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CF0835 argS; arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CF0715 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CF0714 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CF0716 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CF0598 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CF0525 omp06; outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D CF0765 dnaK; heat shock protein HSP70 cofactor K04043 dnaK; molecular chaperone DnaK D CF0764 grpE; heat shock protein HSP70 cofactor K03687 GRPE; molecular chaperone GrpE D CF0365 groL3; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0033 groL1; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0366 groS; heat shock protein HSP10 subunit K04078 groES; chaperonin GroES D CF0680 dnaJ; heat shock protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D CF0607 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0109 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0535 imp1; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cfe02000] D CF0266 yzeB; ABC transporter K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CF0411 tauB; ABC transporter of Nitrate and Fe K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D BAE81149.1 CF0377; hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CF0375 abc1; ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CF0376 abc2; ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CF0746 artJ; ABC transporter of amino acids K09996 artJ; arginine transport system substrate-binding protein D CF0464 glnP; ABC transporter of amino acids K17077 artQ; arginine/lysine/histidine transport system permease protein D CF0463 glnQ; ABC transporter of amino acids K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CF0505 omp05; outer membrane protein K02073 metQ; D-methionine transport system substrate-binding protein D CF0506 app; ABC transporter K02072 metI; D-methionine transport system permease protein D CF0507 dppF2; ABC transporter of dipeptides K02071 metN; D-methionine transport system ATP-binding protein D CF0870 fliY; ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CF0467 oppA3; ABC transporter/periplasmic oligopeptide binding lipoprotein component K15580 oppA; oligopeptide transport system substrate-binding protein D CF0402 oppB2; ABC transporter of peptides K15581 oppB; oligopeptide transport system permease protein D CF0401 oppC2; ABC transporter of peptides K15582 oppC; oligopeptide transport system permease protein D CF0399 oppF; ABC transporter of peptides K15583 oppD; oligopeptide transport system ATP-binding protein D CF0400 oppD; ABC transporter of peptides K10823 oppF; oligopeptide transport system ATP-binding protein D CF0403 oppA2; ABC transporter/periplasmic oligopeptide binding lipoprotein component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CF0404 oppA5; ABC transporter/periplasmic oligopeptide binding lipoprotein component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CF0405 oppA4; ABC transporter/periplasmic oligopeptide binding lipoprotein component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CF0865 oppA1; ABC transporter periplasmic oligopeptide binding lipoprotein component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CF0864 oppB1; ABC transporter of peptides K02033 ABC.PE.P; peptide/nickel transport system permease protein D CF0863 oppC1; ABC transporter of peptides K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CF0946 dppD; ABC transporter of dipeptides K02031 ddpD; peptide/nickel transport system ATP-binding protein D CF0947 dppF1; ABC transporter of dipeptides K02032 ddpF; peptide/nickel transport system ATP-binding protein D CF0805 adhS2; ABC transporter/periplasmic Mn/Zn-binding protein K09815 znuA; zinc transport system substrate-binding protein D CF0807 yebI; ABC transporter of metals K09816 znuB; zinc transport system permease protein D CF0806 yebM; ABC transporter of metals K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D BAE81342.1 CF0571; conserved hypothetical protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CF0568 ytgC; ABC transporter of metals K11708 troC; manganese/zinc/iron transport system permease protein D CF0567 ytgD; ABC transporter of metals K11709 troD; manganese/zinc/iron transport system permease protein D CF0569 ytgB1; ABC transporter of metals K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CF0309 bioY; biotin synthase K03523 bioY; biotin transport system substrate-specific component D BAE81021.1 CF0249; conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D BAE81020.1 CF0248; conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D CF0987 yhbG; ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CF0481 abc1; ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein D CF0480 ycfV; ABC transporter of lipoproteins K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CF0953 sufC; ABC transporter K09013 sufC; Fe-S cluster assembly ATP-binding protein D CF0930 uhpC; hexosphosphate transport K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CF0673 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CF0674 ptsH; phosphotransferase system histidine-containing protein HPr K02784 ptsH; phosphocarrier protein HPr D CF0657 ptsN1; phosphotransferase system mannitol/fructose-specific Pts IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CF0658 ptsN2; phosphotransferase system mannitol/fructose-specific Pts IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CF0511 mgtE; Mg++ transporter K06213 mgtE; magnesium transporter D CF0040 exbD; energy transducer K03559 exbD; biopolymer transport protein ExbD D CF0041 tolQ; biopolymer transport proteins K03562 tolQ; biopolymer transport protein TolQ D CF0606 tlyC2; hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D CF0772 tlyC3; hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D CF0605 tlyC1; hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D CF0958 omp17; outer membrane protein OmpA K03162 ompA; major outer membrane protein D CF0101 omp03; outer membrane protein ompB K08719 K08719; outer membrane protein B D CF0525 omp06; outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D CF0285 arcD; amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease D CF0510 xasA; amino acid antiporter K20265 gadC; glutamate:GABA antiporter D CF0226 tyrP; tyrosine transport K03834 tyrP; tyrosine-specific transport protein D CF0268 ychM; sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D CF0994 nfo; endonuclease IV K03980 murJ; putative peptidoglycan lipid II flippase D BAE81073.1 CF0301; hypothetical protein K09125 yhhQ; queuosine precursor transporter D BAE81192.1 CF0420; conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter D CF0151 ftsW; cell division related rod shape-determining membrane protein K03588 ftsW; cell division protein FtsW D CF0037 omp01; outer membrane protein K03640 pal; peptidoglycan-associated lipoprotein D CF0038 tolB; tolB protein precursor K03641 tolB; TolB protein C 02044 Secretion system [BR:cfe02044] D CF0066 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D CF0067 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CF0068 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D CF0023 ylmG; integral membrane protein K02221 yggT; YggT family protein D CF0965 yscC; type III secretion general secretion pathway protein D K03219 yscC; type III secretion protein C D CF0079 fliF1; type III secretion flagellar biosynthesis M-ring protein K03222 yscJ; type III secretion protein J D CF0077 fliO; type III secretion flagellar biosynthesis translocase K03223 yscL; type III secretion protein L D CF0970 fliI1; type III secretory flagellar biosynthesis ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CF0076 fliP; type III secretion flagellar biosynthesis inner membrane protein K03226 yscR; type III secretion protein R D CF0075 fliQ; type III secretion flagellar biosynthesis inner membrane protein K03227 yscS; type III secretion protein S D CF0074 fliR; type III secretion flagellar biosynthesis inner membrane protein K03228 yscT; type III secretion protein T D CF0547 yscU; type III secretory flagellar biosynthesis Yop translocation protein U K03229 yscU; type III secretion protein U D CF0548 lcrD; type III secretory flagellar biosynthesis K03230 yscV; type III secretion protein V D CF0549 lcrE; low calcium response protein E K04058 yscW; type III secretion protein W D CF0580 flhA; type III secretory flagellar biosynthesis K02400 flhA; flagellar biosynthesis protein FlhA D CF0107 fliF2; type III secretion flagellar biosynthesis M-ring protein K02409 fliF; flagellar M-ring protein FliF D CF0106 fliH; type III secretory flagellar biosynthesis K02411 fliH; flagellar assembly protein FliH D CF0105 fliI2; type III secretory flagellar biosynthesis ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CF0967 fliN; type III secretion flagellar motor switch domain K02417 fliN; flagellar motor switch protein FliN D CF0089 secA1; preprotein translocase secA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CF0828 secDF; protein export proteins SecD/SecF fusion K12257 secDF; SecD/SecF fusion protein D CF0314 secE; preprotein translocase SecE chain K03073 secE; preprotein translocase subunit SecE D BAE81465.1 CF0693; conserved hypothetical protein K03075 secG; preprotein translocase subunit SecG D CF0895 secY; preprotein translocase SecY chain K03076 secY; preprotein translocase subunit SecY D CF0353 ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CF0228 ftsY; cell division related signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D CF0131 yajC; preprotein translocase K03210 yajC; preprotein translocase subunit YajC D CF0535 imp1; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cfe02042] D CF0606 tlyC2; hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D CF0772 tlyC3; hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D CF0605 tlyC1; hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:cfe02022] D CF0850 atoS; nitrogen regulation two-component sensor histidine kinase ntrB K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CF0852 atoC; nitrogen regulation two-component transcription regulatory protein K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:cfe02035] D CF0106 fliH; type III secretory flagellar biosynthesis K02411 fliH; flagellar assembly protein FliH D CF0105 fliI2; type III secretory flagellar biosynthesis ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CF0580 flhA; type III secretory flagellar biosynthesis K02400 flhA; flagellar biosynthesis protein FlhA D CF0967 fliN; type III secretion flagellar motor switch domain K02417 fliN; flagellar motor switch protein FliN D CF0107 fliF2; type III secretion flagellar biosynthesis M-ring protein K02409 fliF; flagellar M-ring protein FliF D CF0579 rpoF; DNA-directed RNA polymerase sigma 28 K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cfe04812] D CF0097 mreB; HSP70 class molecular chaperones K03569 mreB; rod shape-determining protein MreB and related proteins D CF0056 parA; chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D BAE81784.1 pCF07; ParA family protein K03496 parA; chromosome partitioning protein D CF0948 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cfe04147] D CF0051 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CF0890 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CF0943 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CF0336 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CF0034 ahpC; thio-specific antioxidant peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CF0365 groL3; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0033 groL1; heat shock protein HSP60 subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CF0765 dnaK; heat shock protein HSP70 cofactor K04043 dnaK; molecular chaperone DnaK D CF0280 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CF0427 imdH; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CF0313 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D CF0753 ycfF; bis (5'-nucleosyl)-tetraphosphatase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CF0474 adk2; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CF0265 adk1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CF0740 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CF1005 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CF0081 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CF0468 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CF0695 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CF0110 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cfe02048] D CF0097 mreB; HSP70 class molecular chaperones K03569 mreB; rod shape-determining protein MreB and related proteins D CF0824 gltX; glutamyl tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CF0607 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CF0109 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cfe03100] D CFtRNA38 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CFtRNA16 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CFtRNA37 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CFtRNA23 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CFtRNA28 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CFtRNA02 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CFtRNA13 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CFtRNA21 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CFtRNA05 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CFtRNA06 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CFtRNA34 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CFtRNA33 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CFtRNA03 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CFtRNA04 tRNA-His K14226 tRNA-His; tRNA His D CFtRNA17 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CFtRNA09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA29 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CFtRNA35 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CFtRNA10 tRNA-Met K14230 tRNA-Met; tRNA Met D CFtRNA15 tRNA-Met K14230 tRNA-Met; tRNA Met D CFtRNA14 tRNA-Met K14230 tRNA-Met; tRNA Met D CFtRNA26 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CFtRNA01 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CFtRNA22 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CFtRNA08 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CFtRNA25 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CFtRNA30 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CFtRNA24 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CFtRNA36 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CFtRNA11 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CFtRNA19 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CFtRNA12 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CFtRNA18 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CFtRNA07 tRNA-Val K14237 tRNA-Val; tRNA Val D CFtRNA20 tRNA-Val K14237 tRNA-Val; tRNA Val D CF16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CF23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CF5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CF0017 pqqC; coenzyme PQQ synthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D CF0173 dsbD1; thioredoxin/thiol-disulfide isomerase K01829 dsbH; disulfide reductase [EC:1.8.-.-] D CF0919 lnt; apolipoprotein N-acetyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CF0536 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CF0560 yojL; thiamine biosynthesis lipoprotein apbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D BAE81112.1 CF0340; conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CF0964 karG; ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D CF0670 imp2; inner membrane protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D CF0043 yabD; deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CF0692 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CF0926 mip; FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D CF1004 nqrA; Na (+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D CF0642 nqrB; Na (+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D CF0643 nqrC; Na (+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CF0644 nqrD; Na (+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D CF0645 nqrE; Na (+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D CF0130 nqrF; Na (+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D CF0115 zntA; cadmium/zinc cation transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CF0108 nifU; NifU-related protein K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D CF0498 ses; serine esterase esterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D BAE81735.1 CF0963; conserved hypothetical protein K19411 mcsA; protein arginine kinase activator D CF0095 tigA; FKBP-type peptidyl-prolyl cis-trans isomerase K03545 tig; trigger factor D CF0561 smpB; ssrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D CF0234 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D CF0281 ltuA; late transcription unit A protein K08274 ltuA; late transcription unit A protein D CF0557 ltuB; late transcription unit B protein K08275 ltuB; late transcription unit B protein D CF0672 ebp; hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CF0573 adt1; ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D CF0880 adt2; ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D CF0944 ygo; phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D CF0750 panF; sodium/proline, sodium/panthothenate symporters K03307 TC.SSS; solute:Na+ symporter, SSS family D CF0515 sdt; sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CF0790 gltT; glutamate symporter K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D CF0123 dagA1; D-alanine/glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CF0798 dagA2; D-alanine/glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CF0084 brnQ; branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CF0396 ybhI; dicarboxylase translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CF0345 phoH; ATPase K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D CF0526 omp07; outer membrane protein/ompH K06142 hlpA; outer membrane protein C 99994 Others D CF0155 cutA; periplasmic divalent cation tolerance protein CutA1 K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D CF0952 sufB; ABC transporter integral membrane protein K09015 sufD; Fe-S cluster assembly protein SufD D CF0460 rbn; tRNA-processing ribonuclease BN K07058 K07058; membrane protein D BAE81549.1 CF0777; conserved hypothetical protein K07081 K07081; putative periplasmic solute-binding protein D BAE81397.1 CF0625; conserved hypothetical protein K07083 K07083; putative periplasmic solute-binding protein D BAE81768.1 CF0996; conserved hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D CF0702 trxA2; thioredoxin K06888 K06888; uncharacterized protein D CF0394 hhl; acyltransferase K06889 K06889; uncharacterized protein D BAE81162.1 CF0390; conserved hypothetical protein K06889 K06889; uncharacterized protein D CF0227 yccA; transport permease K06890 K06890; uncharacterized protein D CF0154 nab1; nucleic acid binding protein K06960 K06960; uncharacterized protein D CF0983 nab2; nucleic acid binding protein K06960 K06960; uncharacterized protein D CF0954 ynhE; ABC transporter K07033 K07033; uncharacterized protein D CF0486 secA2; preprotein translocase secA subunit K07039 K07039; uncharacterized protein D CF0844 pph1; phosphohydrolase K07098 K07098; uncharacterized protein D BAE81644.1 CF0872; conserved hypothetical protein K07099 K07099; uncharacterized protein D CF0125 set; SET domain protein K07117 K07117; uncharacterized protein D CF0787 ebp12; hypothetical protein K07164 K07164; uncharacterized protein D BAE81630.1 CF0858; conserved hypothetical protein K08998 K08998; uncharacterized protein D BAE81144.1 CF0372; conserved hypothetical protein K08999 K08999; uncharacterized protein D BAE81531.1 CF0759; conserved hypothetical protein K09131 K09131; uncharacterized protein D BAE81489.1 CF0717; conserved hypothetical protein K09779 K09779; uncharacterized protein D CF0945 ebp17; hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 30, 2024