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Transcription Machinery - Chitinophaga filiformis
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E MYF79_08275 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E MYF79_08635 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E MYF79_08640 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Sigma factors
E MYF79_27010 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
E MYF79_06675 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
E MYF79_21945 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E MYF79_31410 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E MYF79_09495 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E MYF79_01725 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E MYF79_22675 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E MYF79_01015 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E MYF79_12910 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E MYF79_06800 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_05780 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_24420 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_09410 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_20685 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_24520 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_17650 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_29105 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_32020 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_28750 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_31800 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_07990 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_16690 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_30900 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_32050 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_22150 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_23310 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_22915 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_12430 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_17325 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_29395 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_13270 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_23005 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_11190 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_22780 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_04850 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_16210 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_20400 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_20865 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_23010 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_29340 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_14500 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_10820 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E MYF79_04240 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E MYF79_03270 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E MYF79_27060 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
E MYF79_08600 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E MYF79_19045 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E MYF79_19040 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS
E MYF79_19035 STAS domain-containing protein K17763 rsbR; rsbT co-antagonist protein RsbR
D Transcription elongation factors
E MYF79_06240 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E MYF79_04995 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
E MYF79_24775 hypothetical protein K19000 rof; Rho-binding antiterminator
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024