+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium fournieri
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cfou00010]
D CFOUR_07665 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CFOUR_03245 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFOUR_04900 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CFOUR_04015 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CFOUR_10520 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFOUR_09865 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFOUR_06090 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CFOUR_03575 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFOUR_06100 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFOUR_10515 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CFOUR_06095 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CFOUR_01065 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFOUR_08220 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFOUR_07335 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFOUR_07940 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CFOUR_07750 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_04485 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CFOUR_09900 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CFOUR_09980 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CFOUR_09090 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFOUR_06560 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CFOUR_10210 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CFOUR_01760 bglF1; PTS system beta-glucoside-specific EIIBCA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:cfou00020]
D CFOUR_03145 gltA1; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CFOUR_05935 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CFOUR_02225 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CFOUR_04400 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_09220 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CFOUR_00985 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CFOUR_00990 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CFOUR_00980 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CFOUR_04000 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CFOUR_08670 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFOUR_07030 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CFOUR_02355 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CFOUR_10210 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CFOUR_07940 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CFOUR_07750 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cfou00030]
D CFOUR_03245 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFOUR_06070 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CFOUR_06080 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CFOUR_05650 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CFOUR_06150 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CFOUR_06060 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CFOUR_06065 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CFOUR_08785 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CFOUR_08485 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CFOUR_09090 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFOUR_03730 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CFOUR_10520 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFOUR_09865 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFOUR_04015 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CFOUR_04900 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cfou00040]
D CFOUR_08120 tuaD1; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFOUR_10115 tuaD2; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFOUR_03385 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_08095 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_06150 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:cfou00051]
D CFOUR_02540 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CFOUR_02530 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CFOUR_02510 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CFOUR_04900 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CFOUR_04015 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CFOUR_10520 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFOUR_09865 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFOUR_06090 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CFOUR_07755 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CFOUR_08785 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cfou00052]
D CFOUR_07880 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CFOUR_01205 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_06610 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_08090 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_03385 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_08095 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_09090 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFOUR_07665 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CFOUR_10390 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CFOUR_04900 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CFOUR_04350 bfrA; Beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
D CFOUR_08120 tuaD1; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFOUR_10115 tuaD2; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:cfou00500]
D CFOUR_04350 bfrA; Beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CFOUR_03385 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_08095 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_04360 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CFOUR_04750 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CFOUR_07290 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CFOUR_08400 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CFOUR_04755 glgE; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D CFOUR_04355 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CFOUR_01760 bglF1; PTS system beta-glucoside-specific EIIBCA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CFOUR_07395 glgX; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D CFOUR_07410 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D CFOUR_09410 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CFOUR_09420 otsB; Trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CFOUR_09090 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFOUR_07665 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CFOUR_03245 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cfou00520]
D CFOUR_10155 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CFOUR_01760 bglF1; PTS system beta-glucoside-specific EIIBCA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CFOUR_06695 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CFOUR_01755 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFOUR_01960 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CFOUR_03735 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CFOUR_09145 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CFOUR_01030 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CFOUR_08185 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CFOUR_08180 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CFOUR_07665 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CFOUR_06560 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CFOUR_09090 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFOUR_03385 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_08095 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_08120 tuaD1; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFOUR_10115 tuaD2; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFOUR_03590 wbiB; dTDP-L-rhamnose 4-epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D CFOUR_07880 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CFOUR_01205 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_06610 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_08090 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_10390 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CFOUR_03245 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFOUR_02540 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CFOUR_02530 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CFOUR_02510 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CFOUR_04360 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cfou00620]
D CFOUR_07940 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CFOUR_07750 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_05675 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CFOUR_09900 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CFOUR_09830 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CFOUR_09835 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CFOUR_07335 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFOUR_02910 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CFOUR_02915 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CFOUR_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_03530 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_07230 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CFOUR_09980 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CFOUR_09220 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CFOUR_04485 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CFOUR_09945 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CFOUR_03075 putative FAD-linked oxidoreductase K18930 dld; D-lactate dehydrogenase
D CFOUR_06355 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CFOUR_02905 cfiA; 2-oxoglutarate carboxylase large subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CFOUR_02355 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CFOUR_08670 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFOUR_07030 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CFOUR_04000 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CFOUR_10210 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_00665 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cfou00630]
D CFOUR_08670 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFOUR_03145 gltA1; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CFOUR_05935 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_03530 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_02430 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CFOUR_02425 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CFOUR_00155 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CFOUR_02450 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D CFOUR_07910 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CFOUR_07800 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_07865 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_03960 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFOUR_07760 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CFOUR_07765 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_07770 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CFOUR_07270 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CFOUR_04400 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:cfou00640]
D CFOUR_09830 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CFOUR_09835 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_05675 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CFOUR_10955 acuI; Acrylyl-CoA reductase AcuI K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CFOUR_02910 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CFOUR_02915 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CFOUR_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_03530 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_11030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CFOUR_02430 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CFOUR_02425 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CFOUR_04485 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CFOUR_04640 gldA; Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:cfou00650]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_05575 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CFOUR_00985 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CFOUR_00990 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CFOUR_00980 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CFOUR_11030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CFOUR_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_06905 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_07970 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11020 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11025 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_09220 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CFOUR_05675 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CFOUR_02990 scoA; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CFOUR_02985 scoB; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CFOUR_11015 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CFOUR_04960 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CFOUR_02465 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CFOUR_08350 gutB; Sorbitol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:cfou00660]
D CFOUR_11015 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CFOUR_04960 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CFOUR_02465 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CFOUR_05120 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CFOUR_05125 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CFOUR_04995 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cfou00562]
D CFOUR_08505 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D CFOUR_07355 impA; putative inositol 1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CFOUR_06090 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cfou00190]
D CFOUR_05680 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CFOUR_00985 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CFOUR_00990 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CFOUR_00980 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CFOUR_07690 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CFOUR_07685 qcrB; Menaquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D CFOUR_07695 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D CFOUR_06055 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CFOUR_07705 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CFOUR_07700 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CFOUR_09000 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CFOUR_07710 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CFOUR_06045 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CFOUR_04705 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CFOUR_04715 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CFOUR_04710 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CFOUR_04700 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CFOUR_04720 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CFOUR_04685 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CFOUR_04695 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CFOUR_04690 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CFOUR_09595 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CFOUR_03550 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CFOUR_09690 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cfou00710]
D CFOUR_06095 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CFOUR_03575 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFOUR_06100 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFOUR_10515 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CFOUR_10520 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFOUR_09865 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFOUR_04015 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CFOUR_06060 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CFOUR_08785 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CFOUR_06090 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CFOUR_06150 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CFOUR_06065 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CFOUR_08670 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cfou00720]
D CFOUR_02355 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CFOUR_08670 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFOUR_04000 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CFOUR_00985 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CFOUR_00990 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CFOUR_00980 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_02225 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CFOUR_05935 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CFOUR_02910 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CFOUR_02915 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CFOUR_05815 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CFOUR_02175 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CFOUR_00130 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CFOUR_09835 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CFOUR_09830 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:cfou00680]
D CFOUR_03960 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFOUR_08220 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFOUR_08670 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFOUR_07755 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CFOUR_10520 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFOUR_09865 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFOUR_04015 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CFOUR_04900 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CFOUR_09830 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CFOUR_09835 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CFOUR_01065 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFOUR_04990 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CFOUR_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:cfou00910]
D CFOUR_03685 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CFOUR_07265 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CFOUR_07800 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_07865 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_09490 cynT; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cfou00920]
D CFOUR_10010 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CFOUR_10015 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CFOUR_03210 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CFOUR_06950 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CFOUR_10020 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CFOUR_10030 sir; Sulfite reductase [ferredoxin] K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D CFOUR_02375 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFOUR_09890 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFOUR_09160 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CFOUR_09155 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CFOUR_02210 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CFOUR_08800 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cfou00061]
D CFOUR_02910 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CFOUR_02915 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CFOUR_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_03530 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_07960 acyl carrier protein K02078 acpP; acyl carrier protein
D CFOUR_01035 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_01040 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_08395 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cfou00071]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_01035 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_01040 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_08395 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_09900 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cfou00561]
D CFOUR_07270 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CFOUR_07755 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CFOUR_04640 gldA; Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CFOUR_10400 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CFOUR_05470 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D CFOUR_07660 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CFOUR_05050 fbpC1; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CFOUR_10285 fbpC3; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CFOUR_03590 wbiB; dTDP-L-rhamnose 4-epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:cfou00564]
D CFOUR_05145 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CFOUR_07660 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CFOUR_08505 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D CFOUR_10620 glpQ1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CFOUR_10625 glpQ2; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CFOUR_07090 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CFOUR_06810 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CFOUR_09780 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D CFOUR_08505 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cfou00230]
D CFOUR_09090 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFOUR_03730 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CFOUR_09295 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CFOUR_09375 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CFOUR_03280 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CFOUR_09840 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CFOUR_09310 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CFOUR_09320 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CFOUR_09315 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CFOUR_09290 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CFOUR_02470 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CFOUR_02475 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CFOUR_09360 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CFOUR_09370 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CFOUR_03285 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CFOUR_06380 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CFOUR_04115 yhcR1; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_06370 yhcR2; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_07965 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_07540 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CFOUR_04440 rihA1; Pyrimidine-specific ribonucleoside hydrolase RihA K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D CFOUR_07995 rihB; Pyrimidine-specific ribonucleoside hydrolase RihB K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D CFOUR_09580 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CFOUR_02055 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CFOUR_02060 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CFOUR_08640 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CFOUR_08950 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CFOUR_02070 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CFOUR_05945 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CFOUR_06205 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CFOUR_09015 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CFOUR_09005 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CFOUR_08290 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CFOUR_06375 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CFOUR_01085 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CFOUR_08195 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CFOUR_00880 cyaB; Adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CFOUR_09845 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CFOUR_00280 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CFOUR_01855 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CFOUR_06440 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D CFOUR_10010 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CFOUR_10015 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cfou00240]
D CFOUR_06220 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CFOUR_06225 carA1; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CFOUR_06235 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CFOUR_06230 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CFOUR_05855 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CFOUR_09880 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CFOUR_06215 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CFOUR_07105 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CFOUR_08640 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CFOUR_02420 yceF; Maf-like protein YceF K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CFOUR_05540 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CFOUR_04115 yhcR1; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_06370 yhcR2; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_07965 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_07995 rihB; Pyrimidine-specific ribonucleoside hydrolase RihB K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D CFOUR_02320 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CFOUR_06240 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CFOUR_10125 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CFOUR_09015 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CFOUR_09005 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CFOUR_02555 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CFOUR_06545 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CFOUR_03205 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CFOUR_06860 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CFOUR_11000 Putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cfou00250]
D CFOUR_07500 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CFOUR_07715 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CFOUR_10090 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CFOUR_05825 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CFOUR_05415 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFOUR_05420 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CFOUR_09845 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CFOUR_09370 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CFOUR_06235 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CFOUR_11030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CFOUR_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_06905 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_07970 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11020 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11025 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_07265 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CFOUR_06640 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CFOUR_07800 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_07865 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_06220 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CFOUR_06225 carA1; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CFOUR_09315 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CFOUR_01755 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFOUR_09295 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cfou00260]
D CFOUR_00675 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CFOUR_00680 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CFOUR_04625 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CFOUR_04630 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CFOUR_07850 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CFOUR_03960 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFOUR_07270 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CFOUR_01065 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFOUR_04990 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CFOUR_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CFOUR_07760 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CFOUR_07765 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_07770 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CFOUR_06345 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CFOUR_07435 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CFOUR_11230 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CFOUR_11225 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cfou00270]
D CFOUR_09160 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CFOUR_09155 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CFOUR_08445 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CFOUR_00135 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CFOUR_06190 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CFOUR_09995 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CFOUR_07540 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CFOUR_03910 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CFOUR_00675 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CFOUR_00680 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CFOUR_04625 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CFOUR_02210 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CFOUR_08800 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CFOUR_02215 metZ; O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CFOUR_07735 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFOUR_02375 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFOUR_09890 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFOUR_04485 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CFOUR_08670 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFOUR_06345 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CFOUR_04990 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CFOUR_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cfou00280]
D CFOUR_07735 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_03530 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CFOUR_02430 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CFOUR_02425 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CFOUR_11030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CFOUR_02990 scoA; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CFOUR_02985 scoB; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cfou00290]
D CFOUR_07435 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CFOUR_05120 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CFOUR_05125 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CFOUR_04995 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CFOUR_11015 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CFOUR_04960 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CFOUR_04965 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CFOUR_04945 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CFOUR_07735 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFOUR_10090 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CFOUR_00665 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cfou00300]
D CFOUR_04625 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CFOUR_00675 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CFOUR_00680 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CFOUR_06855 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CFOUR_06865 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CFOUR_04295 dapD1; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CFOUR_04310 dapD2; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CFOUR_05400 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CFOUR_04315 dapE2; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CFOUR_06715 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CFOUR_04620 lysA1; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CFOUR_05110 lysA3; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CFOUR_07585 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFOUR_07580 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cfou00310]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_11030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CFOUR_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_06905 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_07970 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11020 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11025 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cfou00220]
D CFOUR_05405 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CFOUR_05415 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFOUR_05420 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CFOUR_09315 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CFOUR_07800 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_07865 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_06220 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CFOUR_06225 carA1; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CFOUR_07265 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CFOUR_10090 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CFOUR_05390 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CFOUR_09770 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D CFOUR_05395 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CFOUR_05385 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CFOUR_05400 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cfou00330]
D CFOUR_01095 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CFOUR_06640 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CFOUR_08610 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CFOUR_08600 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:cfou00340]
D CFOUR_07360 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CFOUR_03715 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_10990 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_04490 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CFOUR_10580 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CFOUR_10585 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CFOUR_10590 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CFOUR_10570 hutG; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:cfou00350]
D CFOUR_03715 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_10990 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_09900 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CFOUR_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_06905 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_07970 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11020 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11025 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_03695 Ureidoglycolate lyase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism [PATH:cfou00360]
D CFOUR_03725 paaI; Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D CFOUR_05575 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CFOUR_03715 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_10990 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cfou00380]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_00155 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CFOUR_02450 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cfou00400]
D CFOUR_07645 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CFOUR_06285 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CFOUR_06280 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CFOUR_06290 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CFOUR_02610 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CFOUR_06295 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CFOUR_11205 trpE2; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CFOUR_11210 phnB; Anthranilate synthase component 2, pyocyanine specific K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CFOUR_11215 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CFOUR_07345 trpC1; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CFOUR_11220 trpC2; Tryptophan biosynthesis protein TrpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D CFOUR_11230 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CFOUR_11225 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CFOUR_03255 Intracellular chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D CFOUR_00545 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CFOUR_10445 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CFOUR_03715 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_10990 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cfou00410]
D CFOUR_11030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CFOUR_09535 panC1; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CFOUR_09910 panC2; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CFOUR_11000 Putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:cfou00430]
D CFOUR_09835 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CFOUR_09830 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cfou00450]
D CFOUR_08800 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CFOUR_08445 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CFOUR_00135 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CFOUR_06005 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CFOUR_11310 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CFOUR_10010 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CFOUR_10015 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CFOUR_03455 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cfou00460]
D CFOUR_07500 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CFOUR_03960 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cfou00470]
D CFOUR_01990 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFOUR_05150 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CFOUR_09315 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CFOUR_08965 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CFOUR_07570 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CFOUR_06715 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CFOUR_04620 lysA1; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CFOUR_05110 lysA3; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cfou00480]
D CFOUR_03540 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CFOUR_09745 ybdK2; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CFOUR_07740 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CFOUR_08795 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CFOUR_02225 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CFOUR_05650 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CFOUR_06070 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cfou00515]
D CFOUR_03430 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cfou00514]
D CFOUR_03430 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cfou00542]
D CFOUR_04675 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cfou00541]
D CFOUR_03385 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_08095 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFOUR_01205 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_06610 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_08090 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFOUR_10390 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CFOUR_08120 tuaD1; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFOUR_10115 tuaD2; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFOUR_00925 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CFOUR_00935 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CFOUR_00930 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D CFOUR_02540 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CFOUR_02530 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CFOUR_03735 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CFOUR_08185 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CFOUR_08180 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:cfou00550]
D CFOUR_09145 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CFOUR_01030 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CFOUR_07555 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CFOUR_07570 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CFOUR_07585 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFOUR_05150 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CFOUR_07580 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CFOUR_08325 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CFOUR_05845 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFOUR_07575 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CFOUR_07560 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CFOUR_07590 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CFOUR_00180 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CFOUR_02295 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CFOUR_09590 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CFOUR_00650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CFOUR_00645 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cfou00552]
D CFOUR_05845 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFOUR_04675 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cfou00543]
D CFOUR_04675 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CFOUR_09160 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cfou00730]
D CFOUR_02885 thiC; Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CFOUR_01765 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CFOUR_04775 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFOUR_02835 thiO; Glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D CFOUR_06530 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CFOUR_02825 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CFOUR_02840 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CFOUR_05160 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CFOUR_02605 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CFOUR_01855 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cfou00740]
D CFOUR_06135 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CFOUR_06145 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CFOUR_06130 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CFOUR_06140 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CFOUR_06925 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:cfou00750]
D CFOUR_04170 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CFOUR_08345 pdxY; Pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CFOUR_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CFOUR_07850 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CFOUR_05780 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cfou00760]
D CFOUR_08985 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CFOUR_04115 yhcR1; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_06370 yhcR2; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_07965 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CFOUR_08585 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CFOUR_02690 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CFOUR_09035 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CFOUR_06805 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CFOUR_08910 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CFOUR_07010 cobB2; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CFOUR_05485 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CFOUR_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_06905 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_07970 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11020 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFOUR_11025 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cfou00770]
D CFOUR_11015 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CFOUR_04960 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CFOUR_04965 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CFOUR_04945 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CFOUR_09905 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CFOUR_09535 panC1; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CFOUR_09910 panC2; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CFOUR_03955 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CFOUR_06195 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CFOUR_05185 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CFOUR_05285 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CFOUR_07735 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFOUR_11000 Putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:cfou00780]
D CFOUR_06755 bioW; 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D CFOUR_06750 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CFOUR_03650 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CFOUR_03655 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CFOUR_02240 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CFOUR_02455 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cfou00785]
D CFOUR_07775 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CFOUR_07780 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_07940 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CFOUR_07750 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CFOUR_04400 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CFOUR_07760 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CFOUR_07765 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CFOUR_07770 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cfou00790]
D CFOUR_09570 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CFOUR_00595 pld1; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CFOUR_05095 pld2; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CFOUR_09560 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CFOUR_09555 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CFOUR_04325 folP1; Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CFOUR_09565 folP2; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CFOUR_03200 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CFOUR_08660 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CFOUR_06135 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CFOUR_07300 trpE1; Anthranilate synthase component 1 K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D CFOUR_09275 dat; D-alanine aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CFOUR_03390 moeA; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cfou00670]
D CFOUR_03200 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CFOUR_05815 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CFOUR_02175 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CFOUR_03960 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFOUR_03280 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CFOUR_03285 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CFOUR_06160 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CFOUR_07765 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CFOUR_03205 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CFOUR_06860 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CFOUR_00130 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cfou00860]
D CFOUR_00590 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_05035 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_01120 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CFOUR_01175 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CFOUR_01135 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CFOUR_01125 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CFOUR_01155 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CFOUR_01160 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CFOUR_05920 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CFOUR_06515 putative heme peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D CFOUR_01130 nasF; Uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CFOUR_07020 sumT; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CFOUR_06055 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CFOUR_06045 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CFOUR_07730 cobU; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CFOUR_07895 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CFOUR_10475 copA1; Copper resistance protein A precursor K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cfou00130]
D CFOUR_01455 ubiE; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CFOUR_05020 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CFOUR_01415 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CFOUR_01400 catB; Muconate cycloisomerase 1 K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CFOUR_01345 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CFOUR_01390 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CFOUR_01265 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cfou00900]
D CFOUR_06530 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CFOUR_07075 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CFOUR_09460 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CFOUR_03485 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CFOUR_09455 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CFOUR_07065 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CFOUR_04035 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_07625 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CFOUR_03950 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CFOUR_08325 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CFOUR_06060 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cfou00523]
D CFOUR_00925 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CFOUR_00935 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CFOUR_00930 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CFOUR_05020 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CFOUR_00935 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cfou00332]
D CFOUR_08610 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CFOUR_08600 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cfou00261]
D CFOUR_10010 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CFOUR_10015 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CFOUR_00675 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CFOUR_00680 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CFOUR_06855 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CFOUR_06865 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cfou00521]
D CFOUR_07665 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CFOUR_09090 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFOUR_07355 impA; putative inositol 1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CFOUR_00925 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CFOUR_00935 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CFOUR_00930 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CFOUR_07665 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cfou00525]
D CFOUR_00925 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CFOUR_00935 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cfou00401]
D CFOUR_00545 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CFOUR_03715 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_10990 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CFOUR_11205 trpE2; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CFOUR_11210 phnB; Anthranilate synthase component 2, pyocyanine specific K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:cfou00998]
D CFOUR_07960 acyl carrier protein K02078 acpP; acyl carrier protein
D CFOUR_05080 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites
D CFOUR_06190 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D CFOUR_05080 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cfou00362]
D CFOUR_08685 catD1; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CFOUR_10310 catD2; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CFOUR_05575 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D CFOUR_07230 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cfou00625]
D CFOUR_09900 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:cfou00633]
D CFOUR_08895 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cfou00626]
D CFOUR_09900 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cfou03020]
D CFOUR_01605 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CFOUR_01610 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CFOUR_01890 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CFOUR_06200 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CFOUR_03045 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cfou03010]
D CFOUR_05280 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CFOUR_07120 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CFOUR_01730 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CFOUR_01885 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CFOUR_01835 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CFOUR_10820 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CFOUR_01645 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CFOUR_01820 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CFOUR_01950 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CFOUR_01695 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CFOUR_01880 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CFOUR_01640 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CFOUR_01875 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CFOUR_03315 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CFOUR_06915 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CFOUR_07200 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CFOUR_01745 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CFOUR_03310 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D CFOUR_01720 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CFOUR_08535 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CFOUR_01505 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CFOUR_01715 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CFOUR_01700 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CFOUR_01705 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CFOUR_01795 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CFOUR_01825 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CFOUR_01555 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CFOUR_10810 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CFOUR_01550 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CFOUR_01500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CFOUR_01945 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CFOUR_01785 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CFOUR_01845 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CFOUR_01735 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CFOUR_01895 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CFOUR_01830 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CFOUR_07165 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CFOUR_05340 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CFOUR_08625 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CFOUR_01725 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CFOUR_01710 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CFOUR_01790 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CFOUR_03705 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CFOUR_08620 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CFOUR_03325 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CFOUR_01740 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CFOUR_01840 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CFOUR_03335 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CFOUR_03340 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CFOUR_03320 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D CFOUR_11355 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CFOUR_05335 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CFOUR_09030 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cfou00970]
D CFOUR_00590 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_05035 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_04890 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CFOUR_04925 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CFOUR_04885 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CFOUR_06315 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CFOUR_06330 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CFOUR_08310 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CFOUR_06445 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CFOUR_10420 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CFOUR_09435 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFOUR_03455 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CFOUR_06160 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CFOUR_08665 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CFOUR_10975 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CFOUR_07515 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CFOUR_09525 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CFOUR_04615 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CFOUR_06985 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CFOUR_06350 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CFOUR_05375 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CFOUR_05380 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CFOUR_05445 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CFOUR_02275 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cfou03060]
D CFOUR_01850 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CFOUR_01490 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CFOUR_06085 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CFOUR_06395 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CFOUR_06390 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CFOUR_11340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFOUR_02585 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFOUR_05600 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFOUR_07210 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CFOUR_07215 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CFOUR_08285 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CFOUR_05745 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CFOUR_04380 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CFOUR_05740 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CFOUR_07160 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CFOUR_07485 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cfou04122]
D CFOUR_04775 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFOUR_02375 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFOUR_09890 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFOUR_04830 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CFOUR_02820 moeZ; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CFOUR_02830 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
D CFOUR_05795 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:cfou03018]
D CFOUR_08630 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CFOUR_08220 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFOUR_06910 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CFOUR_04515 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CFOUR_10790 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CFOUR_04655 hypothetical protein K03628 rho; transcription termination factor Rho
D CFOUR_06850 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CFOUR_09975 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFOUR_02030 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_09705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_03550 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CFOUR_09690 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CFOUR_11285 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cfou03030]
D CFOUR_00655 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_03500 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_04850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_05010 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_07400 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_07455 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFOUR_00625 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFOUR_00885 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFOUR_08550 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFOUR_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFOUR_10780 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CFOUR_08245 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CFOUR_02750 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CFOUR_08840 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_10815 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_07895 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CFOUR_07155 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CFOUR_05270 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFOUR_04855 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cfou03410]
D CFOUR_00790 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CFOUR_05165 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CFOUR_09495 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CFOUR_03555 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CFOUR_07245 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CFOUR_03230 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CFOUR_03415 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CFOUR_04905 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CFOUR_02230 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CFOUR_09775 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CFOUR_05270 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFOUR_04855 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cfou03420]
D CFOUR_03770 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CFOUR_05325 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CFOUR_07330 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CFOUR_05295 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CFOUR_06120 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CFOUR_02680 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_02695 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_03260 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_05270 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFOUR_04855 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CFOUR_03045 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cfou03430]
D CFOUR_02680 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_02695 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_03260 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_04030 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CFOUR_04025 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CFOUR_02750 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CFOUR_08840 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_10815 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_07455 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFOUR_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFOUR_00625 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFOUR_08550 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFOUR_00885 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFOUR_00655 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_03500 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_04850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_05010 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_07400 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_04855 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cfou03440]
D CFOUR_02750 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CFOUR_08840 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_10815 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CFOUR_08330 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CFOUR_00635 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CFOUR_06765 recombinase A K03553 recA; recombination protein RecA
D CFOUR_05270 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFOUR_06405 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CFOUR_06400 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CFOUR_06410 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CFOUR_05175 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CFOUR_11185 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CFOUR_07455 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFOUR_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFOUR_00625 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFOUR_08550 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFOUR_00885 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFOUR_00655 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_03500 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_04850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_05010 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_07400 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_06170 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cfou03250]
D CFOUR_00145 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cfou02010]
D CFOUR_02190 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CFOUR_05055 fbpA3; Fe(3+)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CFOUR_02195 molybdate ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D CFOUR_05060 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D CFOUR_02185 potA1; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CFOUR_05065 potA2; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CFOUR_10600 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CFOUR_10610 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CFOUR_10605 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CFOUR_10595 sugC; Trehalose import ATP-binding protein SugC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CFOUR_09255 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CFOUR_09245 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CFOUR_09240 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CFOUR_09235 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CFOUR_02145 metQ1; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CFOUR_02150 metQ2; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CFOUR_02135 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D CFOUR_02140 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CFOUR_04235 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K13889 gsiB; glutathione transport system substrate-binding protein
D CFOUR_04230 dppB; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein
D CFOUR_04225 dppC; Dipeptide transport system permease protein DppC K13891 gsiD; glutathione transport system permease protein
D CFOUR_04220 oppD; Oligopeptide transport ATP-binding protein OppD K13892 gsiA; glutathione transport system ATP-binding protein
D CFOUR_10320 iron-enterobactin transporter periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CFOUR_10335 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein
D CFOUR_10330 fepG; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D CFOUR_10325 yusV2; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CFOUR_01445 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein
D CFOUR_01435 mntB1; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein
D CFOUR_01440 yusV1; putative siderophore transport system ATP-binding protein YusV K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CFOUR_06775 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CFOUR_06785 bioN; Energy-coupling factor transporter transmembrane protein BioN K16783 bioN; biotin transport system permease protein
D CFOUR_06780 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CFOUR_04210 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D CFOUR_04455 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D CFOUR_00460 tagG1; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D CFOUR_00455 tagH1; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CFOUR_08150 tagG2; Teichoic acid translocation permease protein TagG K09692 tagG; teichoic acid transport system permease protein
D CFOUR_08155 tagH2; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CFOUR_10910 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D CFOUR_10905 ytrE3; ABC transporter ATP-binding protein YtrE K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CFOUR_04795 ABC-2 family transporter protein K20460 nukE; lantibiotic transport system permease protein
D CFOUR_04790 ABC-2 family transporter protein K20461 nukG; lantibiotic transport system permease protein
D CFOUR_04800 drrA1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K20459 nukF; lantibiotic transport system ATP-binding protein
D CFOUR_01375 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CFOUR_01370 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein
D CFOUR_02950 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CFOUR_02945 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CFOUR_10070 yheI2; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CFOUR_10075 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CFOUR_01250 yheS1; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cfou02060]
D CFOUR_09515 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CFOUR_06685 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CFOUR_01760 bglF1; PTS system beta-glucoside-specific EIIBCA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CFOUR_09520 bglF2; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:cfou03070]
D CFOUR_06395 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CFOUR_06390 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CFOUR_01490 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CFOUR_06085 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CFOUR_01850 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CFOUR_11340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFOUR_02585 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFOUR_05600 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFOUR_07215 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CFOUR_07210 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CFOUR_05745 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CFOUR_04380 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CFOUR_05740 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cfou02020]
D CFOUR_00595 pld1; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CFOUR_05095 pld2; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CFOUR_01070 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CFOUR_01075 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CFOUR_09255 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CFOUR_05240 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CFOUR_05245 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CFOUR_05225 kdpA; Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CFOUR_05230 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CFOUR_05235 kdpC; Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CFOUR_06045 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CFOUR_03350 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CFOUR_03345 mprA1; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D CFOUR_03355 htrB; Serine protease Do-like HtrB K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CFOUR_02565 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CFOUR_02560 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CFOUR_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CFOUR_01445 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein
D CFOUR_01440 yusV1; putative siderophore transport system ATP-binding protein YusV K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CFOUR_01435 mntB1; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein
D CFOUR_04095 cusS; Sensor kinase CusS K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CFOUR_01370 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein
D CFOUR_01375 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CFOUR_07175 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CFOUR_00825 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CFOUR_00830 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D CFOUR_07800 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_07865 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_00780 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CFOUR_07915 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CFOUR_08185 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CFOUR_08180 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cfou02024]
D CFOUR_03910 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CFOUR_11205 trpE2; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CFOUR_11210 phnB; Anthranilate synthase component 2, pyocyanine specific K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CFOUR_07645 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CFOUR_05245 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CFOUR_01035 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_01040 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_08395 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_00780 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CFOUR_06145 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CFOUR_02920 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CFOUR_07980 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CFOUR_06385 Bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFOUR_08465 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFOUR_08470 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CFOUR_08475 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CFOUR_08480 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CFOUR_11340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFOUR_01490 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CFOUR_06085 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CFOUR_01850 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CFOUR_02585 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFOUR_05600 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFOUR_07215 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CFOUR_07210 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CFOUR_08505 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D CFOUR_01370 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein
D CFOUR_01375 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CFOUR_06565 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CFOUR_08220 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cfou01501]
D CFOUR_10155 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CFOUR_07590 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cfou01502]
D CFOUR_04095 cusS; Sensor kinase CusS K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CFOUR_05150 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CFOUR_01990 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFOUR_07580 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CFOUR_07575 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CFOUR_07560 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cfou01503]
D CFOUR_11320 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CFOUR_00145 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cfou01000]
C 01001 Protein kinases [BR:cfou01001]
D CFOUR_09815 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D CFOUR_00170 pknB; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CFOUR_00175 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CFOUR_07640 pknL; Serine/threonine-protein kinase PknL K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D CFOUR_01070 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CFOUR_05240 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CFOUR_03350 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CFOUR_02565 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CFOUR_04095 cusS; Sensor kinase CusS K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CFOUR_09385 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cfou01009]
D CFOUR_00190 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cfou01002]
D CFOUR_07485 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CFOUR_02070 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CFOUR_05945 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CFOUR_07675 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CFOUR_09295 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CFOUR_01755 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFOUR_07715 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CFOUR_09990 yraA2; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D CFOUR_09675 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CFOUR_10685 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CFOUR_04005 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D CFOUR_03775 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D CFOUR_08525 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D CFOUR_10460 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D CFOUR_08795 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CFOUR_08420 dcp; Peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CFOUR_00380 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CFOUR_07740 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CFOUR_04315 dapE2; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CFOUR_09710 dapE3; Succinyl-diaminopimelate desuccinylase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D CFOUR_01860 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CFOUR_07055 map; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CFOUR_09575 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CFOUR_04910 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D CFOUR_03355 htrB; Serine protease Do-like HtrB K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CFOUR_01915 Thermophilic serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CFOUR_00950 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D CFOUR_09355 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CFOUR_02295 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CFOUR_09590 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CFOUR_08695 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CFOUR_08700 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CFOUR_02715 lon; Lon protease K07177 K07177; Lon-like protease
D CFOUR_06675 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CFOUR_07160 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:cfou01003]
D CFOUR_05705 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CFOUR_03430 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D CFOUR_06425 pimA1; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D CFOUR_07670 pimB; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D CFOUR_01425 mgtA1; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D CFOUR_04355 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CFOUR_04675 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CFOUR_07630 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CFOUR_06030 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CFOUR_00390 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D CFOUR_00395 aftA; Arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D CFOUR_10290 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CFOUR_06505 Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D CFOUR_10165 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D CFOUR_01905 hypothetical protein K22902 K22902; D-galactosaminyltransferase
D CFOUR_00445 glfT1; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D CFOUR_10305 glfT2; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D CFOUR_02505 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D CFOUR_09410 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CFOUR_04330 gpgS; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cfou01005]
D CFOUR_04675 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cfou01011]
D CFOUR_09145 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CFOUR_01030 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CFOUR_07555 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CFOUR_07570 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CFOUR_07585 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFOUR_05150 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CFOUR_01990 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFOUR_08965 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CFOUR_07575 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CFOUR_07560 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CFOUR_05845 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFOUR_11300 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CFOUR_07590 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CFOUR_00180 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CFOUR_02295 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CFOUR_09590 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CFOUR_07675 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CFOUR_09675 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CFOUR_10685 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CFOUR_06305 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CFOUR_11320 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cfou01004]
D CFOUR_10260 ppsA; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13
D CFOUR_01035 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_01040 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_08395 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_10265 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32
D CFOUR_07660 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cfou01006]
D CFOUR_07625 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CFOUR_03950 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CFOUR_08325 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CFOUR_06720 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CFOUR_01265 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CFOUR_06055 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CFOUR_10295 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:cfou01007]
D CFOUR_00590 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_05035 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_05445 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CFOUR_02275 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CFOUR_09435 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFOUR_04615 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CFOUR_03455 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CFOUR_07515 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CFOUR_08665 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CFOUR_10975 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CFOUR_09525 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CFOUR_06330 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CFOUR_06350 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CFOUR_08310 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CFOUR_10420 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CFOUR_06985 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CFOUR_06445 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CFOUR_06315 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CFOUR_05375 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CFOUR_05380 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CFOUR_10090 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CFOUR_03715 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_10990 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFOUR_06750 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CFOUR_08445 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CFOUR_05400 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CFOUR_11030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CFOUR_03650 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CFOUR_01175 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CFOUR_07735 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFOUR_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cfou00194]
D CFOUR_04720 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CFOUR_04715 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CFOUR_04710 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CFOUR_04705 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CFOUR_04700 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CFOUR_04695 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CFOUR_04690 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CFOUR_04685 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cfou03000]
D CFOUR_06655 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CFOUR_06680 srlR; Glucitol operon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CFOUR_10425 dasR; HTH-type transcriptional repressor DasR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CFOUR_08460 yvoA; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator
D CFOUR_05785 gabR; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CFOUR_07390 tetR; Tetracycline repressor protein class H K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D CFOUR_05940 acnR; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D CFOUR_09150 transcriptional regulator MalT K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D CFOUR_09960 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CFOUR_08320 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CFOUR_02995 pcaR; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CFOUR_00780 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CFOUR_01285 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CFOUR_02285 cmtR1; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D CFOUR_04580 cmtR2; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D CFOUR_08315 smtB; HTH-type transcriptional repressor SmtB K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D CFOUR_06800 clgR; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D CFOUR_06605 dtxR; Diphtheria toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D CFOUR_01430 ideR; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CFOUR_02455 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CFOUR_05255 anaerobic benzoate catabolism transcriptional regulator K07729 K07729; putative transcriptional regulator
D CFOUR_03070 Helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D CFOUR_06640 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CFOUR_00760 whiB1; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CFOUR_02035 whiB2; Redox-responsive transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CFOUR_02515 whmD; Transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CFOUR_02640 whiB3; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CFOUR_04815 csoR1; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CFOUR_10540 csoR2; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CFOUR_11325 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CFOUR_09465 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CFOUR_05410 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CFOUR_08380 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CFOUR_06240 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CFOUR_11280 hypothetical protein K07735 algH; putative transcriptional regulator
D CFOUR_06665 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D CFOUR_07605 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cfou03021]
D CFOUR_03045 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CFOUR_01890 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CFOUR_01605 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CFOUR_01610 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CFOUR_06200 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CFOUR_06565 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D CFOUR_06600 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CFOUR_00690 sigC; ECF RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFOUR_02040 sigD; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFOUR_02625 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFOUR_04370 sigE; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFOUR_11305 sigM; ECF RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFOUR_06970 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D CFOUR_06265 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CFOUR_01495 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D CFOUR_03930 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CFOUR_04655 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cfou03019]
D CFOUR_08630 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CFOUR_07250 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CFOUR_06850 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CFOUR_08250 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CFOUR_08880 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CFOUR_04515 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CFOUR_10790 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CFOUR_08220 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFOUR_06910 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CFOUR_04655 hypothetical protein K03628 rho; transcription termination factor Rho
D CFOUR_09975 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFOUR_02030 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_09705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_03550 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CFOUR_09690 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CFOUR_11285 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CFOUR_06115 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D CFOUR_05735 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D CFOUR_06660 hrpB2; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D CFOUR_00340 hrpB1; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cfou03011]
D CFOUR_05280 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CFOUR_07120 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CFOUR_01730 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CFOUR_01885 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CFOUR_01835 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CFOUR_10820 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CFOUR_01645 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CFOUR_01820 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CFOUR_01950 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CFOUR_01695 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CFOUR_01880 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CFOUR_01640 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CFOUR_01875 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CFOUR_03315 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CFOUR_06915 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CFOUR_07200 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CFOUR_01745 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CFOUR_03310 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D CFOUR_01720 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CFOUR_08535 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CFOUR_01505 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CFOUR_01715 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CFOUR_01700 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CFOUR_01705 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CFOUR_01795 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CFOUR_01825 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CFOUR_10810 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CFOUR_01550 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CFOUR_01500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CFOUR_01555 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CFOUR_01945 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CFOUR_01785 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CFOUR_01845 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CFOUR_01735 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CFOUR_01895 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CFOUR_01830 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CFOUR_07165 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CFOUR_05340 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CFOUR_08625 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CFOUR_01725 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CFOUR_01710 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CFOUR_01790 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CFOUR_08620 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CFOUR_03325 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CFOUR_01740 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CFOUR_01840 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CFOUR_03335 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CFOUR_03340 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CFOUR_03320 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D CFOUR_11355 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CFOUR_05335 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CFOUR_09030 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D CFOUR_03705 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:cfou03009]
D CFOUR_07250 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CFOUR_08880 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CFOUR_08335 era; GTPase Era K03595 era; GTPase
D CFOUR_08615 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D CFOUR_06970 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D CFOUR_06265 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CFOUR_01495 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D CFOUR_03480 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CFOUR_06155 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CFOUR_07015 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D CFOUR_05180 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CFOUR_08370 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CFOUR_11335 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CFOUR_07600 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CFOUR_03435 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CFOUR_05480 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CFOUR_04345 rlmAII; 23S rRNA (guanine(748)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CFOUR_09430 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CFOUR_07085 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CFOUR_10710 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CFOUR_05535 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CFOUR_07480 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CFOUR_02010 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CFOUR_07185 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D CFOUR_08630 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CFOUR_06310 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CFOUR_04515 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CFOUR_02605 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CFOUR_05545 der; GTPase Der K03977 engA; GTPase
D CFOUR_06700 hflX; GTPase HflX K03665 hflX; GTPase
D CFOUR_04670 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CFOUR_06375 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CFOUR_06955 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CFOUR_06975 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D CFOUR_00365 ribosome-associated protein K14761 rlbA; ribosome-associated protein
D CFOUR_08580 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D CFOUR_08360 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D CFOUR_04055 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D CFOUR_07255 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cfou03016]
D CFOUR_08250 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CFOUR_00590 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_05035 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_06985 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CFOUR_07515 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CFOUR_10975 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CFOUR_03455 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CFOUR_04615 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CFOUR_09525 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CFOUR_06330 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CFOUR_06315 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CFOUR_08310 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CFOUR_06445 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CFOUR_10420 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CFOUR_09435 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFOUR_08665 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CFOUR_06350 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CFOUR_05375 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CFOUR_05380 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CFOUR_05445 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CFOUR_02275 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CFOUR_06595 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CFOUR_05800 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D CFOUR_10215 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CFOUR_01900 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CFOUR_06930 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CFOUR_04775 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFOUR_04670 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CFOUR_06720 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CFOUR_03210 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CFOUR_11350 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CFOUR_08955 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CFOUR_06525 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CFOUR_00345 2',5' RNA ligase family K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CFOUR_02620 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CFOUR_00555 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CFOUR_06745 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CFOUR_07180 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CFOUR_02170 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CFOUR_05365 Putative TrmH family tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CFOUR_10710 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CFOUR_04830 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CFOUR_09280 putative global regulator K06980 ygfZ; tRNA-modifying protein YgfZ
D CFOUR_00575 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CFOUR_09585 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CFOUR_02005 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CFOUR_02015 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CFOUR_01995 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CFOUR_06910 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cfou03012]
D CFOUR_06960 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CFOUR_05330 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CFOUR_07115 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CFOUR_01655 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CFOUR_01650 fusA; Elongation factor G K02355 fusA; elongation factor G
D CFOUR_04660 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CFOUR_07095 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D CFOUR_04665 prmC1; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CFOUR_03680 pth1; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CFOUR_03700 pth2; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CFOUR_01870 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CFOUR_06270 efp; Elongation factor P K02356 efp; elongation factor P
D CFOUR_02890 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CFOUR_03665 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D CFOUR_04070 arfB; Peptidyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:cfou03110]
D CFOUR_09915 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CFOUR_09510 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CFOUR_08680 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CFOUR_09975 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFOUR_02030 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_09705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_08375 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CFOUR_09965 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CFOUR_09970 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CFOUR_07420 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D CFOUR_02025 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CFOUR_09575 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CFOUR_04685 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CFOUR_06455 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CFOUR_01915 Thermophilic serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CFOUR_00145 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CFOUR_06360 Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CFOUR_10755 trxC; Putative thioredoxin-2 K03671 TXN; thioredoxin
D CFOUR_11315 Thioredoxin C-1 K03671 TXN; thioredoxin
D CFOUR_04745 Thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:cfou04131]
D CFOUR_08640 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CFOUR_08285 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CFOUR_10520 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFOUR_03575 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFOUR_06100 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFOUR_01065 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFOUR_07335 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:cfou04121]
D CFOUR_05765 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cfou03051]
D CFOUR_05795 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D CFOUR_05760 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D CFOUR_05755 hypothetical protein K13572 pafB; proteasome accessory factor B
D CFOUR_05750 hypothetical protein K13573 pafC; proteasome accessory factor C
D CFOUR_05770 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cfou03032]
D CFOUR_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CFOUR_10780 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CFOUR_08245 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CFOUR_02750 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CFOUR_08840 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_10815 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_07455 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFOUR_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFOUR_08550 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFOUR_00885 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFOUR_00655 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_03500 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_04850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_05010 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_07400 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_00625 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFOUR_07895 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CFOUR_07155 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CFOUR_05270 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFOUR_04855 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CFOUR_00055 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CFOUR_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CFOUR_00870 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cfou03036]
D CFOUR_07250 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CFOUR_10520 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFOUR_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CFOUR_07220 smc2; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D CFOUR_05525 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CFOUR_05530 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CFOUR_08215 Septum formation initiator K05589 ftsB; cell division protein FtsB
D CFOUR_02945 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CFOUR_07590 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CFOUR_06830 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CFOUR_07550 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CFOUR_07565 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CFOUR_02950 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CFOUR_07545 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CFOUR_11320 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CFOUR_07530 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D CFOUR_05520 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CFOUR_11330 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CFOUR_11325 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CFOUR_11335 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CFOUR_07130 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CFOUR_05510 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CFOUR_04385 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CFOUR_06105 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cfou03400]
D CFOUR_09045 ogt; Methylated-DNA--protein-cysteine methyltransferase, constitutive K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CFOUR_03905 phrB; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CFOUR_05165 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CFOUR_03555 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CFOUR_09495 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CFOUR_00790 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CFOUR_03045 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CFOUR_04480 nudG; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CFOUR_09800 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CFOUR_06545 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CFOUR_00355 alkB; Alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D CFOUR_04905 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CFOUR_03415 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CFOUR_07245 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CFOUR_03230 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CFOUR_02230 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CFOUR_09775 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CFOUR_04855 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CFOUR_05270 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFOUR_05325 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CFOUR_07330 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CFOUR_05295 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CFOUR_06120 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CFOUR_02680 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_02695 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_03260 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFOUR_01605 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CFOUR_01610 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CFOUR_01890 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CFOUR_06200 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CFOUR_03770 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CFOUR_04030 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CFOUR_04025 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CFOUR_07455 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFOUR_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFOUR_08550 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFOUR_00885 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFOUR_00655 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_03500 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_04850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_05010 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_07400 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFOUR_00625 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFOUR_02750 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CFOUR_08840 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_10815 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_06765 recombinase A K03553 recA; recombination protein RecA
D CFOUR_06405 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CFOUR_06400 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CFOUR_06410 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CFOUR_06170 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CFOUR_09475 hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D CFOUR_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CFOUR_05175 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CFOUR_11185 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CFOUR_08330 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CFOUR_00635 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CFOUR_05490 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CFOUR_02435 addA; ATP-dependent helicase/nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CFOUR_00055 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CFOUR_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CFOUR_00870 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CFOUR_10790 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CFOUR_07505 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CFOUR_06675 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CFOUR_02115 DNA polymerase IV K14161 imuB; protein ImuB
D CFOUR_02155 dnaE1; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CFOUR_06760 recX; Regulatory protein RecX K03565 recX; regulatory protein
D CFOUR_08990 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CFOUR_03215 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CFOUR_05140 mutT1; Putative mutator protein MutT4 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D CFOUR_05505 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D CFOUR_09015 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CFOUR_09005 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CFOUR_06950 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cfou03029]
D CFOUR_06960 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CFOUR_05330 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CFOUR_07115 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CFOUR_01655 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CFOUR_01650 fusA; Elongation factor G K02355 fusA; elongation factor G
D CFOUR_08335 era; GTPase Era K03595 era; GTPase
D CFOUR_05445 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CFOUR_10975 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CFOUR_06330 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CFOUR_08310 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CFOUR_04615 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CFOUR_04890 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CFOUR_04925 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CFOUR_04885 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CFOUR_02750 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CFOUR_08840 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_10815 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFOUR_09975 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFOUR_09970 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CFOUR_02030 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_09705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_02025 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CFOUR_08375 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CFOUR_09965 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CFOUR_04775 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFOUR_04385 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CFOUR_06055 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CFOUR_06045 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CFOUR_11340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cfou02000]
D CFOUR_10070 yheI2; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CFOUR_10075 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CFOUR_04405 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CFOUR_08435 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CFOUR_05870 yheH; putative multidrug resistance ABC transporter ATP-binding/permease protein YheH K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D CFOUR_01250 yheS1; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
D CFOUR_03505 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CFOUR_05875 yheI1; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K02021 ABC.MR; putative ABC transport system ATP-binding protein
D CFOUR_02190 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CFOUR_05055 fbpA3; Fe(3+)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CFOUR_02195 molybdate ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D CFOUR_05060 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D CFOUR_02185 potA1; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CFOUR_05065 potA2; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CFOUR_10600 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CFOUR_10610 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CFOUR_10605 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CFOUR_10595 sugC; Trehalose import ATP-binding protein SugC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CFOUR_01245 D-ribose transporter subunit RbsB K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CFOUR_01240 rbsC; Ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein
D CFOUR_01235 mglA; Galactose/methyl galactoside import ATP-binding protein MglA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFOUR_09255 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CFOUR_09245 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CFOUR_09240 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CFOUR_09235 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CFOUR_02145 metQ1; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CFOUR_02150 metQ2; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CFOUR_02135 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D CFOUR_02140 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CFOUR_03440 Bacterial extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFOUR_05205 glnH1; Glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFOUR_09810 glnH2; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFOUR_05200 yecS; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein
D CFOUR_05195 glnQ; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CFOUR_04235 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K13889 gsiB; glutathione transport system substrate-binding protein
D CFOUR_04230 dppB; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein
D CFOUR_04225 dppC; Dipeptide transport system permease protein DppC K13891 gsiD; glutathione transport system permease protein
D CFOUR_04220 oppD; Oligopeptide transport ATP-binding protein OppD K13892 gsiA; glutathione transport system ATP-binding protein
D CFOUR_06385 Bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFOUR_08465 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFOUR_08470 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CFOUR_08475 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CFOUR_08480 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CFOUR_10320 iron-enterobactin transporter periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CFOUR_10335 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein
D CFOUR_10330 fepG; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D CFOUR_10325 yusV2; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CFOUR_03015 feuC; Iron-uptake system permease protein FeuC K25283 yclO; iron-siderophore transport system permease protein
D CFOUR_03010 feuB; Iron-uptake system permease protein FeuB K25284 yclN; iron-siderophore transport system permease protein
D CFOUR_03020 fhuC1; Iron(3+)-hydroxamate import ATP-binding protein FhuC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CFOUR_03005 yclQ; putative ABC transporter solute-binding protein YclQ precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CFOUR_04145 corrinoid ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CFOUR_04140 hmuU; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D CFOUR_04135 fhuC2; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CFOUR_04760 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CFOUR_01445 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein
D CFOUR_01435 mntB1; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein
D CFOUR_01440 yusV1; putative siderophore transport system ATP-binding protein YusV K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CFOUR_01535 mntB2; Manganese transport system membrane protein MntB K09819 ABC.MN.P; manganese/iron transport system permease protein
D CFOUR_01530 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D CFOUR_06775 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CFOUR_06785 bioN; Energy-coupling factor transporter transmembrane protein BioN K16783 bioN; biotin transport system permease protein
D CFOUR_06780 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CFOUR_04450 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D CFOUR_04210 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D CFOUR_04455 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D CFOUR_04205 ykoD1; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CFOUR_04200 ykoE; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein
D CFOUR_09330 mtsA; Metal ABC transporter substrate-binding lipoprotein precursor K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CFOUR_09340 znuB; High-affinity zinc uptake system membrane protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D CFOUR_09335 putative ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D CFOUR_00460 tagG1; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D CFOUR_00455 tagH1; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CFOUR_08150 tagG2; Teichoic acid translocation permease protein TagG K09692 tagG; teichoic acid transport system permease protein
D CFOUR_08155 tagH2; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CFOUR_04800 drrA1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K20459 nukF; lantibiotic transport system ATP-binding protein
D CFOUR_04795 ABC-2 family transporter protein K20460 nukE; lantibiotic transport system permease protein
D CFOUR_04790 ABC-2 family transporter protein K20461 nukG; lantibiotic transport system permease protein
D CFOUR_01375 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CFOUR_01370 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein
D CFOUR_10910 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D CFOUR_10905 ytrE3; ABC transporter ATP-binding protein YtrE K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CFOUR_02950 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CFOUR_02945 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CFOUR_03055 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CFOUR_06040 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CFOUR_09790 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CFOUR_02255 ytrB; ABC transporter ATP-binding protein YtrB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFOUR_03060 ybhF; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFOUR_06035 drrA2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFOUR_09795 yxlF2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFOUR_10055 drrA3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFOUR_10735 drrA4; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFOUR_07460 macB; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D CFOUR_09120 ytrF; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D CFOUR_00410 ytrE1; ABC transporter ATP-binding protein YtrE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CFOUR_03490 ytrE2; ABC transporter ATP-binding protein YtrE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CFOUR_07465 lolD; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CFOUR_09125 bceA; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CFOUR_06010 hypothetical protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CFOUR_11240 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CFOUR_01405 sdcS; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D CFOUR_06945 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D CFOUR_00225 qacA1; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D CFOUR_02765 stp; Multidrug resistance protein stp K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D CFOUR_05215 yfmO; Multidrug efflux protein YfmO K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D CFOUR_10645 ynfM; Inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D CFOUR_09515 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CFOUR_06685 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CFOUR_01760 bglF1; PTS system beta-glucoside-specific EIIBCA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CFOUR_09520 bglF2; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CFOUR_02685 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel
D CFOUR_04645 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D CFOUR_05430 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D CFOUR_03370 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CFOUR_08805 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel
D CFOUR_00520 Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D CFOUR_05660 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D CFOUR_05635 tlyC1; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFOUR_05640 tlyC2; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFOUR_08355 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFOUR_04300 gabP1; GABA permease K16237 aroP; aromatic amino acid permease
D CFOUR_04305 gabP2; GABA permease K16237 aroP; aromatic amino acid permease
D CFOUR_00330 arcD; Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CFOUR_04975 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CFOUR_09210 zupT; Zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D CFOUR_10225 ydfJ3; Membrane protein YdfJ K20470 mmpL3; trehalose monomycolate/heme transporter
D CFOUR_02920 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CFOUR_07980 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CFOUR_05820 dcuA; Anaerobic C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CFOUR_07175 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CFOUR_04610 lutP; L-lactate permease K03303 lutP; lactate permease
D CFOUR_04535 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter
D CFOUR_03165 actP1; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D CFOUR_09920 hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family
D CFOUR_10385 nhaK; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CFOUR_01275 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D CFOUR_01280 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein
D CFOUR_03120 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D CFOUR_10985 sdaC1; Serine transporter K03837 sdaC; serine transporter
D CFOUR_10995 sdaC2; Serine transporter K03837 sdaC; serine transporter
D CFOUR_11060 sdaC3; Serine transporter K03837 sdaC; serine transporter
D CFOUR_08285 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CFOUR_03330 Arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D CFOUR_01290 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter
D CFOUR_10930 dcuD; Putative cryptic C4-dicarboxylate transporter DcuD K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D CFOUR_00720 mrpA1; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CFOUR_09715 mrpA2; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CFOUR_00715 mnhC1; Na(+)/H(+) antiporter subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CFOUR_09720 mrpC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CFOUR_00710 mrpD1; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CFOUR_09725 mrpD2; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CFOUR_00705 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CFOUR_09730 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CFOUR_00700 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CFOUR_09735 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CFOUR_00695 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CFOUR_09740 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CFOUR_11300 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CFOUR_01260 Membrane transport protein K13936 mdcF; malonate transporter and related proteins
D CFOUR_08545 rhtC1; Threonine efflux protein K05835 rhtC; threonine efflux protein
D CFOUR_11075 rhtC2; Threonine efflux protein K05835 rhtC; threonine efflux protein
D CFOUR_11275 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump
D CFOUR_11270 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D CFOUR_00585 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CFOUR_07805 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D CFOUR_07565 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CFOUR_08500 hypothetical protein K07224 efeO; iron uptake system component EfeO
D CFOUR_08495 efeB; Deferrochelatase/peroxidase EfeB precursor K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D CFOUR_02905 cfiA; 2-oxoglutarate carboxylase large subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CFOUR_01190 Cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D CFOUR_10230 hypothetical protein K20468 K20468; putative heme transporter
D CFOUR_06460 hypothetical protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cfou02044]
D CFOUR_00825 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CFOUR_00830 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D CFOUR_07525 YGGT family protein K02221 yggT; YggT family protein
D CFOUR_08565 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D CFOUR_01925 eccCa1; ESX-1 secretion system protein EccCa1 K27086 eccC; ESX secretion system protein EccC
D CFOUR_01920 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D CFOUR_01915 Thermophilic serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CFOUR_01940 esxA; 6 kDa early secretory antigenic target K14956 esx; ESAT-6 family protein
D CFOUR_01935 WXG domain conatining protein K14956 esx; ESAT-6 family protein
D CFOUR_02585 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFOUR_05600 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFOUR_06395 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CFOUR_01490 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CFOUR_06390 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CFOUR_06085 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CFOUR_01850 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CFOUR_07210 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CFOUR_07215 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CFOUR_11340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFOUR_05745 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CFOUR_04380 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CFOUR_05740 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cfou02042]
D CFOUR_05635 tlyC1; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFOUR_05640 tlyC2; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFOUR_08355 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFOUR_03190 hemeolysin-III related K11068 hlyIII; hemolysin III
D CFOUR_08505 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:cfou02022]
D CFOUR_01070 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CFOUR_01075 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CFOUR_05240 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CFOUR_05245 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CFOUR_03350 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CFOUR_03345 mprA1; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D CFOUR_02565 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CFOUR_02560 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CFOUR_04095 cusS; Sensor kinase CusS K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CFOUR_09385 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFOUR_09390 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:cfou02035]
D CFOUR_00825 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cfou04812]
D CFOUR_07545 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CFOUR_05520 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CFOUR_11330 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CFOUR_11325 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cfou04147]
D CFOUR_10520 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFOUR_08220 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFOUR_03575 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFOUR_06100 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFOUR_06095 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CFOUR_07335 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFOUR_00145 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CFOUR_02030 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_09705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFOUR_09975 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFOUR_03245 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFOUR_02055 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CFOUR_02060 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CFOUR_01655 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CFOUR_04485 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CFOUR_11240 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CFOUR_01035 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_01040 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_08395 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFOUR_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFOUR_01855 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CFOUR_06380 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CFOUR_05420 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CFOUR_05415 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFOUR_07880 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CFOUR_04750 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CFOUR_10400 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CFOUR_07800 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_07865 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CFOUR_01135 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CFOUR_04990 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CFOUR_03285 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CFOUR_00970 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFOUR_08730 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CFOUR_06070 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CFOUR_06090 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CFOUR_01065 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cfou02048]
D CFOUR_10370 hsdR; Type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CFOUR_10360 hsdM; Type I restriction enzyme M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CFOUR_04155 mcrB; 5-methylcytosine-specific restriction enzyme B K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CFOUR_04150 5-methylcytosine-specific restriction enzyme subunit McrC K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D CFOUR_03050 parD1; Antitoxin ParD1 K07746 parD1_3_4; antitoxin ParD1/3/4
D CFOUR_08205 doc; Toxin Doc K07341 doc; death on curing protein
D CFOUR_07545 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CFOUR_00590 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_05035 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFOUR_04775 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cfou01504]
D CFOUR_01250 yheS1; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
D CFOUR_00225 qacA1; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D CFOUR_04095 cusS; Sensor kinase CusS K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CFOUR_00900 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D CFOUR_00420 novJ; Short-chain reductase protein NovJ K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D CFOUR_00425 dprE1; putative decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CFOUR_01460 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D CFOUR_02340 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CFOUR_06050 qorA; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CFOUR_07040 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D CFOUR_10635 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CFOUR_06510 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CFOUR_06450 efeN; putative deferrochelatase/peroxidase EfeN precursor K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D CFOUR_08925 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CFOUR_06645 ahpD; Alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D CFOUR_06650 Alkyl hydroperoxide reductase subunit C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D CFOUR_04090 yfeX; putative deferrochelatase/peroxidase YfeX K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CFOUR_00245 hmp; Flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D CFOUR_03250 mhuD; Heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D CFOUR_00600 ftnA; Ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CFOUR_10035 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CFOUR_03195 mrx1; Mycoredoxin 1 K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D CFOUR_05665 pflA; Pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CFOUR_05685 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CFOUR_10240 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CFOUR_09260 mshD3; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D CFOUR_05710 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CFOUR_10170 oatA2; O-acetyltransferase OatA K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D CFOUR_03110 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CFOUR_01050 mshA; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D CFOUR_07340 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CFOUR_05170 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CFOUR_07860 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CFOUR_01295 arsC1; Arsenate-mycothiol transferase ArsC1 K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D CFOUR_04415 pnbA; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CFOUR_10270 Cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D CFOUR_08830 acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CFOUR_08575 gpgP; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D CFOUR_03470 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CFOUR_04730 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D CFOUR_04180 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D CFOUR_06165 def1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CFOUR_09760 def2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CFOUR_04260 mshB; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D CFOUR_06175 pgdA; Peptidoglycan-N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CFOUR_03940 mca; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D CFOUR_09930 ramA; (R)-stereoselective amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CFOUR_10880 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CFOUR_05840 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D CFOUR_10255 accD2; putative propionyl-CoA carboxylase beta chain 5 K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-]
D CFOUR_04820 copB1; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CFOUR_10505 copB2; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CFOUR_02280 zosA; Zinc-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CFOUR_04605 lutA; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CFOUR_04600 lutB; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CFOUR_04595 lutC; Lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CFOUR_01800 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D CFOUR_06000 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D CFOUR_08725 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CFOUR_08875 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K27306 cmrA; mycolic acid reductase
C 99984 Nucleotide metabolism
D CFOUR_09020 Putative NrdI-like protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D CFOUR_07535 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CFOUR_03095 rpfA; Resuscitation-promoting factor RpfA precursor K21687 rpfA; resuscitation-promoting factor RpfA
D CFOUR_03475 rpf2; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB
D CFOUR_00915 Undecaprenyl-phosphate mannosyltransferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
D CFOUR_02495 abgT1; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
D CFOUR_08030 abgT2; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D CFOUR_09425 Alpha/beta hydrolase family protein K03932 lpqC; polyhydroxybutyrate depolymerase
C 99999 Others
D CFOUR_03420 mhqP; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CFOUR_00860 cspA1; putative cold shock protein A K03704 cspA; cold shock protein
D CFOUR_03100 cspA2; Major cold shock protein CspA K03704 cspA; cold shock protein
D CFOUR_07170 hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CFOUR_08980 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CFOUR_08705 tig; Trigger factor K03545 tig; trigger factor
D CFOUR_02955 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CFOUR_09025 nrdH; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D CFOUR_07140 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D CFOUR_01195 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D CFOUR_04045 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CFOUR_07145 hypothetical protein K07460 yraN; putative endonuclease
D CFOUR_05810 PD-(D/E)XK nuclease superfamily protein K07465 K07465; putative RecB family exonuclease
D CFOUR_07135 hypothetical protein K04096 smf; DNA processing protein
D CFOUR_06320 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CFOUR_03845 hypothetical protein K06919 K06919; putative DNA primase/helicase
D CFOUR_02785 Transposase, Mutator family K07493 K07493; putative transposase
D CFOUR_02790 Transposase, Mutator family K07493 K07493; putative transposase
D CFOUR_03375 SAF domain protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CFOUR_06795 PspA/IM30 family protein K03969 pspA; phage shock protein A
D CFOUR_00630 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CFOUR_04495 proY; Proline-specific permease ProY K03293 TC.AAT; amino acid transporter, AAT family
D CFOUR_05775 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CFOUR_11055 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CFOUR_07235 alsT1; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CFOUR_09095 alsT2; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CFOUR_10560 alsT3; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CFOUR_08450 brnQ; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CFOUR_02805 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D CFOUR_08275 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein
D CFOUR_04250 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CFOUR_05955 hypothetical protein K07166 K07166; ACT domain-containing protein
D CFOUR_08365 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CFOUR_05005 D-arabinose 5-phosphate isomerase K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D CFOUR_04780 acm1; Lysozyme M1 precursor K07273 acm; lysozyme
D CFOUR_00910 hypothetical protein K09153 K09153; small membrane protein
C 99994 Others
D CFOUR_09230 hypothetical protein K02039 phoU; phosphate transport system protein
D CFOUR_10885 czcO; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CFOUR_02865 yjcF; putative N-acetyltransferase YjcF K02348 elaA; ElaA protein
D CFOUR_00855 putative ATP-dependent helicase Lhr K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D CFOUR_08810 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin
D CFOUR_00570 ydfJ1; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D CFOUR_03620 ydfJ2; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D CFOUR_06020 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CFOUR_06015 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CFOUR_02290 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein
D CFOUR_03640 hypothetical protein K07058 K07058; membrane protein
D CFOUR_10670 hypothetical protein K07146 K07146; UPF0176 protein
D CFOUR_10865 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D CFOUR_00110 ABC-2 family transporter protein K01421 yhgE; putative membrane protein
D CFOUR_05100 ABC-2 family transporter protein K01421 yhgE; putative membrane protein
D CFOUR_05105 smc1; Chromosome partition protein Smc K01421 yhgE; putative membrane protein
D CFOUR_10945 yidH; Inner membrane protein YidH K00389 yidH; putative membrane protein
D CFOUR_02165 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
D CFOUR_05590 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D CFOUR_10220 hypothetical protein K06860 K06860; putative heme uptake system protein
D CFOUR_05190 Sulfite exporter TauE/SafE K06867 K06867; uncharacterized protein
D CFOUR_08390 hypothetical protein K06867 K06867; uncharacterized protein
D CFOUR_09165 hypothetical protein K06975 K06975; uncharacterized protein
D CFOUR_09345 hypothetical protein K06986 K06986; uncharacterized protein
D CFOUR_00370 Glyoxalase-like domain protein K06996 K06996; uncharacterized protein
D CFOUR_09325 flagellar hook protein FlgE K07004 K07004; uncharacterized protein
D CFOUR_06335 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D CFOUR_06245 Epimerase family protein K07071 K07071; uncharacterized protein
D CFOUR_10000 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D CFOUR_01750 hypothetical protein K07093 K07093; uncharacterized protein
D CFOUR_00745 phosphodiesterase YaeI K07098 K07098; uncharacterized protein
D CFOUR_00320 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D CFOUR_00325 hypothetical protein K07120 K07120; uncharacterized protein
D CFOUR_07900 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein
D CFOUR_11345 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D CFOUR_05615 hypothetical protein K08999 K08999; uncharacterized protein
D CFOUR_08200 hypothetical protein K09009 K09009; uncharacterized protein
D CFOUR_00750 Yqey-like protein K09117 K09117; uncharacterized protein
D CFOUR_02730 hypothetical protein K09118 K09118; uncharacterized protein
D CFOUR_04240 hypothetical protein K09146 K09146; uncharacterized protein
D CFOUR_05960 hypothetical protein K09157 K09157; uncharacterized protein
D CFOUR_02160 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D CFOUR_06815 YciI-like protein K09780 K09780; uncharacterized protein
D CFOUR_04195 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein
D CFOUR_05440 hypothetical protein K09791 K09791; uncharacterized protein
D CFOUR_06990 hypothetical protein K09861 K09861; uncharacterized protein
D CFOUR_06965 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024