+D Transcription factors KO #

  Transcription Factors - Chryseobacterium gleum

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D NCTC11432_01368 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NCTC11432_02756 bspRIM; Modification methylase BspRI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Stork head/winged helix factors C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG TOX C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C NAC C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D NCTC11432_01323 chbR_2; Chb operon repressor K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D NCTC11432_03560 btr_11; Bacillibactin transport regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D NCTC11432_00523 araC_3; Arabinose operon regulatory protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D NCTC11432_00804 araC_5; Arabinose operon regulatory protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D NCTC11432_01662 btr_5; Bacillibactin transport regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D NCTC11432_01865 araC_7; Arabinose operon regulatory protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D NCTC11432_02050 rhaS_7; L-rhamnose operon regulatory protein rhaS K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D NCTC11432_02124 btr_8; Bacillibactin transport regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D NCTC11432_03396 btr_10; Bacillibactin transport regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D NCTC11432_00256 adaA_1; Methylphosphotriester-DNA--protein-cysteine S-methyltransferase K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D NCTC11432_05145 transcriptional activator RhaS K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D NCTC11432_00141 marA; Multiple antibiotic resistance protein marA K13652 K13652; AraC family transcriptional regulator D NCTC11432_00108 ada_1; Regulatory protein of adaptative response K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NCTC11432_02266 ada_2; Regulatory protein of adaptative response K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D NCTC11432_03780 gltR; HTH-type transcriptional regulator gltR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D NCTC11432_03002 oxyR; Morphology and auto-aggregation control protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NCTC11432_05300 cysL; CysJI operon transcriptional activator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D NCTC11432_03777 lacR; Lactose phosphotransferase system repressor K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor C LacI family D NCTC11432_01144 ccpA_2; Catabolite control protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor C GntR family D NCTC11432_00635 gabR_1; HTH-type transcriptional regulatory protein gabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D NCTC11432_00680 gabR_2; HTH-type transcriptional regulatory protein gabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family C Lrp/AsnC family D NCTC11432_02559 asnC_1; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D NCTC11432_04382 asnC_2; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D NCTC11432_00253 lrp_2; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NCTC11432_01826 lrp_3; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NCTC11432_05149 lrp_4; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D NCTC11432_00429 transcriptional regulator SlyA K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D NCTC11432_05252 ohrR_2; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family C Fur family D NCTC11432_00813 Ferric uptake regulator family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NCTC11432_02414 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NCTC11432_03712 zinc uptake transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NCTC11432_04174 Ferric uptake regulator family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NCTC11432_04854 Ferric uptake regulator family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family C CRP/FNR family D NCTC11432_00657 crp_3; cAMP regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NCTC11432_01809 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NCTC11432_02717 vfr_3; Cyclic AMP receptor-like protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NCTC11432_05208 vfr_4; Cyclic AMP receptor-like protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NCTC11432_03038 ntcA; Global nitrogen regulator K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator D NCTC11432_00151 fnr_1; Fumarate and nitrate reduction regulatory protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family C ArsR family D NCTC11432_01378 cadC_1; Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D NCTC11432_01482 cadC_2; Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D NCTC11432_04851 cadC_3; Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family D NCTC11432_01336 Predicted transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D NCTC11432_02454 Predicted transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator C PadR family D NCTC11432_01974 lineage-specific thermal regulator protein K10947 K10947; PadR family transcriptional regulator C Other families D NCTC11432_00853 ideR; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D NCTC11432_00373 copper transport repressor, CopY/TcrY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCTC11432_01053 mecI; Methicillin resistance regulatory protein mecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCTC11432_03149 blaI; Regulatory protein BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCTC11432_03586 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NCTC11432_01367 rghR; RapGH repressor K22299 rghR; HTH-type transcriptional regulator, competence development regulator D NCTC11432_01160 fhlA; Formate hydrogenlyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator D NCTC11432_05048 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D NCTC11432_04740 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCTC11432_02599 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D NCTC11432_02780 paiB; Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator D NCTC11432_02408 Uncharacterized ACR, COG1678 K07735 algH; putative transcriptional regulator D NCTC11432_02986 yocK; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor D NCTC11432_03206 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: September 16, 2025 #
Classification taken and modified from TRANSFAC 7.0