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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Colletotrichum higginsianum</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        CH63R_05837 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        CH63R_09421 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        CH63R_10230 RNA polymerase Rpb3/RpoA insert domain-containing protein	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        CH63R_04218 DNA-directed RNA polymerase ii subunit rpb11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        CH63R_11826 RNA polymerase Rpb4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        CH63R_00572 RNA polymerase ii subunit 7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        CH63R_03494 DNA-directed RNA polymerase subunit	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        CH63R_04754 RNA polymerase Rpb5 domain-containing protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CH63R_02766 RNA polymerase Rpb6	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        CH63R_07700 RNA polymerase Rpb8	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        CH63R_00031 DNA directed RNA polymerase	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        CH63R_05723 DNA-directed RNA polymerases n 8 kDa subunit superfamily	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        CH63R_05711 Transcription factor IIA	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        CH63R_04807 Transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        CH63R_00213 Transcription factor TFIIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        CH63R_14405 Tata-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CH63R_14060 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CH63R_05772 Transcription initiation factor TFIID subunit 1	K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48] 
E        CH63R_05910 Transcription initiation factor tfiid 127kd subunit	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        CH63R_13040 WD repeat domain-containing protein	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        CH63R_03704 TATA box binding protein associated factor	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        CH63R_00583 Transcription initiation factor tfiid subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        CH63R_09445 Bromodomain associated protein	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        CH63R_05803 Transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        CH63R_10968 Transcription initiation factor TFIID 23-30kDa subunit	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        CH63R_03602 Transcription initiation factor tfiid subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        CH63R_01336 Transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        CH63R_12913 Transcription initiation factor IID	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        CH63R_01955 YEATS family protein	K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit 
D      TFIIE
E        CH63R_08039 Transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        CH63R_04952 Transcription initiation factor IIF subunit alpha	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        CH63R_01104 Transcription initiation factor IIF	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        CH63R_12675 TFIIH p62 subunit domain-containing protein	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        CH63R_12869 Tfiih basal transcription factor complex p47 subunit	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        CH63R_10058 Transcription factor tfb4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        CH63R_06700 transcription factor tfb2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        CH63R_02963 DNA repair helicase rad25	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        CH63R_12824 DNA repair helicase rad15	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        CH63R_08926 Transcription factor TFIIH complex subunit Tfb5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        CH63R_04402 Serine threonine-protein kinase	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        CH63R_06050 CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        CH63R_13432 Cyclin ccl1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        CH63R_06659 MED6 mediator sub complex component	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        CH63R_05968 RNA polymerase II mediator complex component Med8	K15130 MED8; mediator of RNA polymerase II transcription subunit 8, fungi type 
E        CH63R_07579 RNA polymerase II mediator complex component SRB4	K15134 SRB4; mediator of RNA polymerase II transcription subunit 17, fungi type 
E        CH63R_12596 RNA polymerase ii mediator complex subunit	K15136 SRB5; mediator of RNA polymerase II transcription subunit 18, fungi type 
D      Middle
E        CH63R_04458 Mediator complex subunit Med5	K15147 MED5; mediator of RNA polymerase II transcription subunit 5 
E        CH63R_08444 RNA polymerase ii mediator complex protein	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        CH63R_02773 transcription factor subunit Med10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        CH63R_04562 RNA polymerase II transcription mediator	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        CH63R_07146 RNA polymerase II transcription subunit 31 mediator	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        CH63R_11749 RNA polymerase II Mediator complex subunit Sin4	K15160 SIN4; mediator of RNA polymerase II transcription subunit 16, fungi type 
D      CDK-module
E        CH63R_08565 Serine threonine-protein kinase ssn3	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        CH63R_12618 RNA polymerase II holoenzyme cyclin-like subunit	K15161 CCNC; cyclin-C 
E        CH63R_09928 Transcription mediator subunit Med12	K15163 SRB8; mediator of RNA polymerase II transcription subunit 12, fungi type 
E        CH63R_08089 hypothetical protein	K15165 SSN2; mediator of RNA polymerase II transcription subunit 13, fungi type 
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        CH63R_05857 Histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        CH63R_04182 FAT domain-containing protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        CH63R_04701 Spt3	K11313 SUPT3H; transcription initiation protein SPT3 
E        CH63R_06844 Spt3	K11313 SUPT3H; transcription initiation protein SPT3 
E        CH63R_01240 Transcriptional activator spt7	K11359 SPT7; transcriptional activator SPT7 
E        CH63R_07663 Transcription factor SPT8	K11360 SPT8; transcriptional activator SPT8 
E        CH63R_10772 uncharacterized protein	K11361 SPT20; transcription factor SPT20 
E        CH63R_09007 Transcriptional co-activator	K11362 HFI1; transcriptional coactivator HFI1/ADA1 
E        CH63R_13889 Saga complex subunit	K11314 TADA2A; transcriptional adapter 2-alpha 
E        CH63R_05786 Histone acetyltransferase subunit 3	K11315 TADA3; transcriptional adapter 3 
E        CH63R_05910 Transcription initiation factor tfiid 127kd subunit	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        CH63R_13040 WD repeat domain-containing protein	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        CH63R_03704 TATA box binding protein associated factor	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        CH63R_00583 Transcription initiation factor tfiid subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        CH63R_05803 Transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        CH63R_10968 Transcription initiation factor TFIID 23-30kDa subunit	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        CH63R_01336 Transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        CH63R_08557 SAGA-associated factor 29	K11364 SGF29; SAGA-associated factor 29 
E        CH63R_02569 Nuclear protein Ataxin-7	K11365 SGF73; SAGA-associated factor 73 
E        CH63R_11747 SNF2 super family protein	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        CH63R_11918 Ubiquitin carboxyl-terminal hydrolase	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        CH63R_02752 Pre-mRNA-splicing factor rse-1	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        CH63R_02314 Snf5/smarcb1/ini1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        CH63R_04512 SWIRM domain-containing protein	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        CH63R_12844 SWIB/MDM2 domain-containing protein	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
D      SWI/SNF complex
E        CH63R_12113 Arid/bright DNA binding domain-containing protein	K11771 SWI1; SWI/SNF chromatin-remodeling complex subunit SWI1 
E        CH63R_02904 SNF2 super family protein	K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] 
E        CH63R_02314 Snf5/smarcb1/ini1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        CH63R_04579 Chromatin remodeling complex subunit	K11768 ARP9; actin-related protein 9 
E        CH63R_01955 YEATS family protein	K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit 
D      RSC complex
E        CH63R_11926 Chromatin structure-remodeling complex protein RSC2	K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2 
E        CH63R_00214 Chromatin remodeling complex subunit	K11761 NPL6; chromatin structure-remodeling complex protein RSC7 
E        CH63R_08098 Arid/bright DNA binding domain-containing protein	K11763 RSC9; chromatin structure-remodeling complex subunit RSC9 
E        CH63R_04579 Chromatin remodeling complex subunit	K11768 ARP9; actin-related protein 9 
E        CH63R_00188 Snf5/smarcb1/ini1	K11770 SFH1; chromatin structure-remodeling complex subunit SFH1 
E        CH63R_02904 SNF2 super family protein	K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] 
D      Others
E        CH63R_08881 transcriptional Coactivator p15	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
C    Other transcription-related factors
D      Transcription elongation factors
E        CH63R_05780 Transcription elongation factor S-II	K03145 TFIIS; transcription elongation factor S-II 
E        CH63R_04415 Transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        CH63R_14182 Transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        CH63R_08979 Transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        CH63R_12749 mRNA cleavage factor complex component pcf11	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        CH63R_05827 CPSF A subunit region	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        CH63R_10390 Endoribonuclease YSH1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        CH63R_06055 Zinc finger ccch type domain containing protein	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        CH63R_02723 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CH63R_05692 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CH63R_11631 mRNA cleavage and polyadenylation specificity factor complex subunit	K06100 SYMPK; symplekin 
E        CH63R_05979 RNA polymerase II subunit A domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        CH63R_04228 Hla class iii protein dom3z	K14845 RAI1; RAT1-interacting protein 
E        CH63R_12982 Duf618 domain protein	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        CH63R_12652 Rpb7-binding protein seb1	K15560 NRD1; protein NRD1 
E        CH63R_07394 helicase sen1	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        CH63R_03493 Peptidyl-prolyl cis-trans isomerase ssp-1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        CH63R_02955 RNA polymerase ii-paf1	K15174 PAF1; RNA polymerase II-associated factor 1 
E        CH63R_04706 Cdc73 family RNA pol II accessory factor	K15175 CDC73; parafibromin 
E        CH63R_02260 Tetratricopeptide	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        CH63R_00817 Lipid acyl hydrolase	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        CH63R_09137 Plus-3 domain-containing protein	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        CH63R_05728 Com1 regulatory protein	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Little elongation complex (LEC)
E        CH63R_05728 Com1 regulatory protein	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Brd4/P-TEFb complex
D      BUR kinase complex
E        CH63R_04431 Serine threonine-protein kinase bur-1	K15562 BUR1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23] 
E        CH63R_00611 Cyclin-K	K15563 BUR2; protein BUR2 
D      CTDK-I complex
E        CH63R_04135 Ctd kinase subunit alpha	K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23] 
E        CH63R_13701 C-type cyclin	K15564 CTK2; CTD kinase subunit beta 
E        CH63R_02676 CTD kinase subunit gamma	K15565 CTK3; CTD kinase subunit gamma 
D      7SK RNP complex
D      DBIRD complex
D      Others
E        CH63R_02925 SNF2 family domain-containing protein	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        CH63R_07345 TATA-binding protein-associated phosphoprotein	K21751 DR1; down-regulator of transcription 1 
E        CH63R_02264 Histone-like transcription factor and archaeal histone	K21752 DRAP1; Dr1-associated corepressor 
E        CH63R_01733 FCP1-like phosphatase	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        CH63R_05881 NLI interacting factor-like phosphatase	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        CH63R_07653 Transcription factor like protein	K17498 SPN1; transcription factor SPN1 
E        CH63R_01234 Transcription factor	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        CH63R_04841 Rtr1/RPAP2 family protein	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        CH63R_02631 WD domain-containing protein	K06666 TUP1; general transcriptional corepressor TUP1 
E        CH63R_10244 Tetratricopeptide	K06665 SSN6; general transcriptional corepressor CYC8 
E        CH63R_07550 SRF-type transcription factor	K12412 MCM1; pheromone receptor transcription factor 
E        CH63R_04811 ATP binding protein	K24104 GPN; GPN-loop GTPase 
E        CH63R_11681 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        CH63R_00032 ATP binding protein	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        CH63R_09457 DNA-directed RNA polymerase	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        CH63R_12934 DNA-directed RNA polymerase	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        CH63R_00419 RNA polymerase Rpb3/RpoA insert domain-containing protein	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        CH63R_02350 DNA-directed RNA polymerase i and iii 14 kDa polypeptide	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        CH63R_12671 RNA polymerase III subunit RPC82	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        CH63R_04453 RNA polymerase III RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        CH63R_13594 DNA-directed RNA polymerase III complex subunit Rpc37	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        CH63R_05528 RNA polymerase Rpc34 subunit	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        CH63R_05201 DNA-directed RNA polymerase III subunit	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        CH63R_11674 RNA polymerase III subunit Rpc25	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        CH63R_10156 RNA polymerase III subunit C17	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
D      Pol I, II, III common subunits
E        CH63R_04754 RNA polymerase Rpb5 domain-containing protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CH63R_02766 RNA polymerase Rpb6	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        CH63R_07700 RNA polymerase Rpb8	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        CH63R_00031 DNA directed RNA polymerase	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        CH63R_05723 DNA-directed RNA polymerases n 8 kDa subunit superfamily	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        CH63R_02765 C2H2 transcription factor	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        CH63R_14405 Tata-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CH63R_14060 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CH63R_00015 Brf1-like TBP-binding domain-containing protein	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        CH63R_03032 myb-like DNA-binding domain-containing protein	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        CH63R_02592 RNA polymerase III transcription factor tfiiic	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        CH63R_04055 RNA polymerase iii transcription factor	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
D      TFIIIC, fungi type
E        CH63R_04055 RNA polymerase iii transcription factor	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        CH63R_02592 RNA polymerase III transcription factor tfiiic	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        CH63R_11430 Transcription factor tfiiic complex subunit	K15205 TFC6; transcription factor C subunit 6 
E        CH63R_02839 Phosphoglycerate mutase	K15206 TFC7; transcription factor C subunit 7 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
E        CH63R_09322 Repressor of RNA polymerase III transcription MAF1	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        CH63R_01094 DNA-directed RNA polymerase	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        CH63R_00419 RNA polymerase Rpb3/RpoA insert domain-containing protein	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        CH63R_02350 DNA-directed RNA polymerase i and iii 14 kDa polypeptide	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        CH63R_02243 A49-like RNA polymerase I associated factor	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        CH63R_08570 RNA polymerase Rpb7-like domain-containing protein	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        CH63R_13980 DNA-directed RNA polymerase subunit	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        CH63R_04754 RNA polymerase Rpb5 domain-containing protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CH63R_02766 RNA polymerase Rpb6	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        CH63R_07700 RNA polymerase Rpb8	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        CH63R_00031 DNA directed RNA polymerase	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        CH63R_05723 DNA-directed RNA polymerases n 8 kDa subunit superfamily	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        CH63R_14405 Tata-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CH63R_14060 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
E        CH63R_00840 RNA polymerase I specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        CH63R_04556 DNA-binding protein	K15217 RRN5; RNA polymerase I-specific transcription initiation factor RRN5 
E        CH63R_12654 Duf1000 domain containing protein	K15218 RRN6; RNA polymerase I-specific transcription initiation factor RRN6 
E        CH63R_04548 Forms a complex with the other RRN protein RRN6 and RRN11	K15219 RRN7; RNA polymerase I-specific transcription initiation factor RRN7 
E        CH63R_04532 hypothetical protein	K15222 RRN11; RNA polymerase I-specific transcription initiation factor RRN11 
E        CH63R_11048 DEK C terminal domain-containing protein	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        CH63R_04415 Transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        CH63R_14182 Transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        CH63R_09352 SNF2 super family protein	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
E        CH63R_04135 Ctd kinase subunit alpha	K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23] 
E        CH63R_13701 C-type cyclin	K15564 CTK2; CTD kinase subunit beta 
E        CH63R_02676 CTD kinase subunit gamma	K15565 CTK3; CTD kinase subunit gamma 
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        CH63R_00213 Transcription factor TFIIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
D      TFS
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#Last updated: April 9, 2024