+D GENES KO
#
KEGG Orthology (KO) - Cytophaga hutchinsonii
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:chu00010]
D CHU_1875 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHU_0472 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHU_2773 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHU_1600 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D CHU_2896 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHU_1341 alf; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CHU_3060 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHU_3277 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHU_2987 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHU_0251 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHU_2229 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CHU_2250 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHU_3731 apgM; phosphoglycerate mutase (2,3-bisphosphoglycerate-independent phosphoglycerate mutase) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHU_3133 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHU_1400 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHU_3718 acoA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CHU_2680 adhB; pyruvate dehydrogenase E1 component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CHU_1755 pdhC; dihydrolipoyllysine-residue acetyltransferase (dihydrolipoamide S-acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1246 adhP; zinc-type alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CHU_2158 yahK; Zn-binding alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CHU_2982 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_2429 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_0656 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CHU_0909 possible haloacid dehalogenase-like hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D CHU_0998 pgm; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHU_0301 gapN; gyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
C 00020 Citrate cycle (TCA cycle) [PATH:chu00020]
D CHU_1275 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CHU_2223 acnA; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CHU_1228 icd; isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CHU_3362 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CHU_3361 sucB; 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHU_2527 pdhC; dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_2402 sucD; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHU_2240 sucC; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHU_2473 sdhA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHU_2474 frdB; succinate dehydrogenase, iron-sulfur subunit (fumarate reductase, iron-sulfur subunit) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHU_2472 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHU_3285 fumB; fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CHU_3664 fumC; fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CHU_3020 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHU_3718 acoA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CHU_2680 adhB; pyruvate dehydrogenase E1 component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CHU_1755 pdhC; dihydrolipoyllysine-residue acetyltransferase (dihydrolipoamide S-acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:chu00030]
D CHU_0472 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHU_1404 gnd; 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CHU_1605 rpe; ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase) K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CHU_1894 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHU_1895 tktC; transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHU_2529 talAB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CHU_3631 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CHU_0998 pgm; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHU_2422 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CHU_2627 prsA; ribose-phosphate diphosphokinase (phosphoribosylpyrophosphate synthetase) K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CHU_0301 gapN; gyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CHU_1661 gdh; glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D CHU_3561 pgl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CHU_1341 alf; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CHU_3060 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHU_2896 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHU_2773 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHU_1600 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:chu00040]
D CHU_3394 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHU_0901 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHU_1605 rpe; ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase) K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:chu00051]
D CHU_0353 CHU large protein; candidate b-mannanase, glycoside hydrolase family 26 protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D CHU_0785 yajF; N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CHU_0467 manA; mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CHU_3484 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CHU_0300 manC; mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CHU_0059 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CHU_0060 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CHU_2773 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHU_1600 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D CHU_2896 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHU_1341 alf; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CHU_3060 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHU_3277 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHU_3631 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:chu00052]
D CHU_0656 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CHU_0657 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CHU_2411 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHU_0850 rfbB; dTDP-glucose 4,6 dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHU_0998 pgm; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHU_1875 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHU_2773 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHU_1600 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D CHU_0803 malZ; a-glucosidase, glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:chu00053]
D CHU_3394 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHU_0901 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHU_3561 pgl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00500 Starch and sucrose metabolism [PATH:chu00500]
D CHU_0803 malZ; a-glucosidase, glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CHU_2268 bglX; b-glucosidase, glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_2273 bglX; candidate b-glucosidase, Glycoside Hydrolase Family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3784 bglX; candidate b-glucosidase, Glycoside Hydrolase Family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3577 bglX; b-glucosidase, glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3811 blgA; broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D CHU_1655 cel; non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_1842 cel; candidate retaining b-glycosidase, glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_2103 cel; endoglucanase, glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_1107 CHU large protein; endoglucanase, glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_1280 cel; non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_0778 glycosylhydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_1727 cel; endoglucanase-related protein, glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_2235 endoglucanase-related protein, glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_3836 glgA; glycogen synthase (UDP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D CHU_1581 glgA; candidate glycogen synthase, Glycosyltransferase Family 3 protein K00693 GYS; glycogen synthase [EC:2.4.1.11]
D CHU_1345 glgB; candidate glycogen branching enzyme, glycoside hydrolase family 13 protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CHU_0308 glgP; a-glucan phosphorylase, glycosyltransferase family 35 protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CHU_2409 amyA; a-amylase, glycoside hydrolase family 13 protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CHU_0801 a-amylase, glycoside hydrolase family 57 protein K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D CHU_2290 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CHU_2602 treC; maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D CHU_0400 otsA; trehalose 6-phosphate synthase / trehalose 6-phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D CHU_0998 pgm; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHU_1875 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHU_0472 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHU_0785 yajF; N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:chu00520]
D CHU_0470 nagZ; b-N-acetylglucosaminidase, glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CHU_1660 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CHU_0785 yajF; N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CHU_3838 glmS; glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHU_0658 glmU; UDP-N-acetylglucosamine pyrophosphorylase K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23]
D CHU_3065 glucokinase regulatory protein, sugar phosphate isomerase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D CHU_3273 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CHU_1552 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHU_2214 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHU_2775 wecB; UDP-N-acetyl glucosamine -2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CHU_0833 galE; UDP-galactose-4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D CHU_3392 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CHU_2766 UDP-N-acetylglucosamine 4; UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CHU_2760 polysaccharide biosynthesis protein; possible glycosyltransferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CHU_2761 kdsB; CMP-N-acetylneuraminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CHU_1875 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHU_0998 pgm; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHU_3394 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHU_0901 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHU_0657 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CHU_2411 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHU_0850 rfbB; dTDP-glucose 4,6 dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHU_0472 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHU_0467 manA; mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CHU_3484 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CHU_0300 manC; mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CHU_0059 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CHU_0060 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:chu00620]
D CHU_2982 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_2429 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_3718 acoA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CHU_2680 adhB; pyruvate dehydrogenase E1 component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CHU_1755 pdhC; dihydrolipoyllysine-residue acetyltransferase (dihydrolipoamide S-acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1246 adhP; zinc-type alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CHU_2158 yahK; Zn-binding alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CHU_1400 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHU_1517 accA; acetyl-CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHU_1623 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CHU_1622 accC; biotin carboxylase, subunit of acetyl CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHU_3281 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHU_2249 poxB; pyruvate dehydrogenase (cytochrome) K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CHU_2980 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D CHU_3235 ycbL; metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CHU_1354 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CHU_0027 maeB; allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CHU_3020 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHU_3285 fumB; fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CHU_3664 fumC; fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CHU_2855 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_3741 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:chu00630]
D CHU_2982 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_2429 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_3020 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHU_1275 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CHU_2223 acnA; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_2836 katE; catalase K03781 katE; catalase [EC:1.11.1.6]
D CHU_2502 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1734 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1735 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_3633 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHU_1021 gcvP; glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CHU_2824 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_0030 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHU_3078 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:chu00640]
D CHU_2982 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_2429 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_3183 dxs; 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1517 accA; acetyl-CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHU_1623 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CHU_1622 accC; biotin carboxylase, subunit of acetyl CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHU_3281 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHU_2240 sucC; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHU_2402 sucD; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHU_2347 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:chu00650]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_2019 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHU_3591 fadB; 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHU_0017 paaG; enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CHU_1071 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D CHU_2473 sdhA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHU_2474 frdB; succinate dehydrogenase, iron-sulfur subunit (fumarate reductase, iron-sulfur subunit) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHU_2472 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHU_0914 yneI; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CHU_1436 leuA; hydroxymethylglutaryl-CoA lyase like protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CHU_3746 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHU_1268 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:chu00660]
D CHU_3746 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHU_1268 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D CHU_2240 sucC; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHU_2402 sucD; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHU_3742 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CHU_3743 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CHU_3744 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:chu00562]
D CHU_3258 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CHU_3277 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:chu00190]
D CHU_1382 nuoA; NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CHU_0509 nuoI; NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CHU_1381 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CHU_1380 nuoC; NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CHU_0511 nuoC; NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CHU_0512 nuoD; NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CHU_1379 nuoD; NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CHU_1378 nuoE; NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CHU_1377 nuoF; NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CHU_1376 nuoG; NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CHU_1375 nuoH; NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CHU_2620 hyfC; NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CHU_1374 nuoI; NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CHU_1373 nuoJ; NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CHU_2618 nuoJ; NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CHU_1372 nuoK; NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CHU_2617 nuoK; NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CHU_1371 nuoL; NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CHU_2616 nuoL; NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CHU_1370 nuoM; NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CHU_2614 nuoM; NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CHU_1369 nuoN; NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CHU_0250 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CHU_2473 sdhA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHU_2474 frdB; succinate dehydrogenase, iron-sulfur subunit (fumarate reductase, iron-sulfur subunit) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHU_2472 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHU_2204 cox15; polyprenyltransferase (cytochrome oxidase assembly factor) K02257 COX10; heme o synthase [EC:2.5.1.141]
D CHU_2201 conserved hypothetical protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CHU_2202 cox3; cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CHU_2203 coxO; cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CHU_2206 coxN; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CHU_2207 ctaC; heme/copper-type cytochrome/quinol oxidase, subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CHU_2205 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CHU_1138 cyo; cytochrome c oxidase, cbb3-type K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHU_1140 cytC; cytochrome c, mono- and diheme variant K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CHU_0559 cyc; cytochrome c551/c552 K08738 CYC; cytochrome c
D CHU_0183 atpA; ATP synthase, subunit alpha (H(+)-transporting two-sector ATPase) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CHU_0336 atpD; ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CHU_0184 atpG; ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CHU_0182 atpH; ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CHU_0337 atpC; ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CHU_0179 atpB; ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CHU_0181 atpF; ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CHU_0180 atpE; ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CHU_3108 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CHU_1243 ipyR; inorganic pyrophosphatase (PPase) K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CHU_1414 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:chu00710]
D CHU_2229 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CHU_2987 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHU_0251 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHU_1341 alf; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CHU_3060 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHU_2896 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHU_1894 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHU_1895 tktC; transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHU_3631 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CHU_3277 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHU_1605 rpe; ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase) K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CHU_2529 talAB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CHU_2855 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CHU_0027 maeB; allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CHU_3020 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:chu00720]
D CHU_2855 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CHU_3020 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHU_3285 fumB; fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CHU_3664 fumC; fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CHU_2473 sdhA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHU_2474 frdB; succinate dehydrogenase, iron-sulfur subunit (fumarate reductase, iron-sulfur subunit) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHU_2472 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHU_2402 sucD; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHU_2240 sucC; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_1228 icd; isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CHU_2223 acnA; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CHU_1517 accA; acetyl-CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHU_1623 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CHU_1622 accC; biotin carboxylase, subunit of acetyl CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHU_3281 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHU_1716 folD; 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CHU_1435 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CHU_2982 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_2429 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:chu00680]
D CHU_1246 adhP; zinc-type alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CHU_3633 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHU_3133 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHU_2855 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CHU_3020 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHU_1341 alf; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CHU_3060 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHU_2896 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHU_2773 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHU_1600 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D CHU_0123 ykgE; Fe-S oxidoreductase, possible dehydrogenase subunit K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D CHU_2982 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_2429 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_2250 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHU_3731 apgM; phosphoglycerate mutase (2,3-bisphosphoglycerate-independent phosphoglycerate mutase) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHU_0996 serA; phosphoserine phosphatase and phosphoglycerate dehydrogenase (D-3-phosphoglycerate dehydrogenase) fusion K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHU_1630 ldhA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHU_2704 aspB; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CHU_0004 phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D CHU_2823 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:chu00910]
D CHU_1319 possible nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CHU_1969 nrtA; ABC-type nitrate/sulfonate/taurine/bicarbonate transporter, substrate binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CHU_1968 nrtB; nitrate ABC transporter, permease component K15577 nrtB; nitrate/nitrite transport system permease protein
D CHU_1967 msmK; ABC-type nitrate transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CHU_1966 nrtD; ABC type nitrate transporter, ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D CHU_1320 napA; periplasmic nitrate reductase/nitrite reductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D CHU_1332 nirB; assimilatory nitrite reductase (NAD(P)H) large subunit precursor K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D CHU_1331 nirD; assimilatory nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D CHU_2502 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1734 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1735 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_3776 gltB; glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CHU_3777 gltD; glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CHU_1041 cab; probable carbonate dehydratase (carbonic anhydrase) K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D CHU_0303 yadF; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D CHU_0526 conserved hypothetical protein; possible carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:chu00920]
D CHU_0635 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CHU_0636 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CHU_0637 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CHU_0638 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CHU_2395 conserved hypothetical protein, DHH family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CHU_3649 conserved hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CHU_0957 cysH; phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CHU_0561 soxC; sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D CHU_0560 soxD; sulfite oxidase cytochrome subunit K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D CHU_2637 cysI; sulfite reductase (NADPH) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D CHU_1816 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHU_0685 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHU_0136 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CHU_2639 metC; cystathionine beta-lyase/cystathionine gamma-synthase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:chu00061]
D CHU_1517 accA; acetyl-CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHU_1623 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CHU_1622 accC; biotin carboxylase, subunit of acetyl CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHU_3281 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHU_2116 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CHU_0385 dltC; acyl carrier protein K02078 acpP; acyl carrier protein
D CHU_1398 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CHU_2469 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHU_1896 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHU_1624 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHU_0390 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHU_1397 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHU_2863 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHU_2123 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_0327 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_1085 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_1091 hdhA; 7-alpha-hydroxysteroid dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_2110 fabZ; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHU_0969 fabA; 3-hydroxydecanoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHU_1037 lpxC; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CHU_3011 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CHU_3672 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CHU_1071 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D CHU_3595 fadD; long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:chu00071]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_3590 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHU_3591 fadB; 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHU_1408 caiA; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHU_3595 fadD; long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHU_1246 adhP; zinc-type alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:chu00561]
D CHU_2158 yahK; Zn-binding alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CHU_1625 plsX; phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CHU_3274 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHU_2690 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CHU_2828 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:chu00564]
D CHU_1307 gpsA; glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CHU_1004 glpD; homodimeric glycerol 3-phosphate dehydrogenase (quinone) K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CHU_3274 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHU_2690 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CHU_2828 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CHU_0769 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CHU_2752 ugpQ; glycerophosphodiester phosphodiesterase, cytosolic K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CHU_1005 ugpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CHU_3053 eutB; Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D CHU_3052 eutC; Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D CHU_0358 cdsA; phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CHU_3236 CDP-diacylglycerol-serine-O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CHU_0357 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CHU_1886 ymdC; possible cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:chu00565]
D CHU_0769 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D CHU_0769 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism [PATH:chu00591]
D CHU_0769 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CHU_3762 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D CHU_3764 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:chu00592]
D CHU_0769 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CHU_3590 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:chu01040]
D CHU_1595 fatty acid desaturase (stearoyl-CoA desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CHU_1686 fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CHU_1136 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:chu00230]
D CHU_0998 pgm; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHU_2422 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CHU_2627 prsA; ribose-phosphate diphosphokinase (phosphoribosylpyrophosphate synthetase) K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CHU_2612 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CHU_0296 purD; phosphoribosylamine--glycine ligase (phosphoribosylglycinamide synthetase) (GARS) K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CHU_3310 purN; formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CHU_1667 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CHU_0126 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CHU_3733 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CHU_3734 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CHU_1912 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CHU_1563 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CHU_3309 purH; IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHU_2005 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CHU_0932 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHU_1653 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CHU_0196 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CHU_3648 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHU_0116 yggV; xanthosine triphosphate pyrophosphatase, Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CHU_0934 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CHU_2684 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CHU_0599 gmk; guanylate kinase (GMP kinase) K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CHU_0451 nrdA; ribonucleoside diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CHU_0452 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CHU_2101 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CHU_2390 spoT; guanosine polyphosphate pyrophosphohydrolase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]
D CHU_1704 relA; GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CHU_1432 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CHU_0316 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CHU_0188 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CHU_1701 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHU_1998 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CHU_0068 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CHU_0637 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CHU_0635 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CHU_0636 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CHU_1261 ureC; urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CHU_1260 ureA; urea amidohydrolase (urease) gamma subunit and beta subunit fusion K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:chu00240]
D CHU_3278 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CHU_3134 carA; carbamoyl-phosphate synthetase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CHU_0084 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CHU_1793 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CHU_1007 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CHU_2701 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CHU_2669 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CHU_2698 orotidine 5' phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CHU_0577 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CHU_3648 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHU_1308 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CHU_2536 pyrG; CTP synthase (CTP synthetase) K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CHU_0086 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CHU_0115 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CHU_0932 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHU_0083 pyrR; uracil phosphoribosyltransferase; pyrimidine operon attenuation protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CHU_0488 pyrR; uracil phosphoribosyltransferase/pyrimidine operon attenuation protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CHU_2002 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CHU_0451 nrdA; ribonucleoside diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CHU_0452 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CHU_2215 dcdA; cytidine/deoxycytidylate deaminase (dCMP deaminase) K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CHU_0019 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CHU_1289 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:chu00250]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHU_0058 asnB; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHU_3693 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHU_3607 asnB; asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHU_0695 yafV; amidase-type enzyme K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CHU_2439 pntA; pyridine nucleotide transhydrogenase, alpha subunit K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CHU_1995 alaDH; L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CHU_3080 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHU_3088 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHU_1701 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHU_1563 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CHU_0084 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CHU_0914 yneI; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CHU_3776 gltB; glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CHU_3777 gltD; glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CHU_0703 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CHU_2502 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1734 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1735 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_3278 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CHU_3134 carA; carbamoyl-phosphate synthetase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CHU_1741 yneH; L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CHU_3838 glmS; glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHU_2612 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:chu00260]
D CHU_3721 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHU_0073 thrA; bifunctional protein: aspartokinase I; homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHU_0139 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHU_0074 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CHU_0075 thrC; L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CHU_3633 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHU_2250 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHU_3731 apgM; phosphoglycerate mutase (2,3-bisphosphoglycerate-independent phosphoglycerate mutase) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHU_0996 serA; phosphoserine phosphatase and phosphoglycerate dehydrogenase (D-3-phosphoglycerate dehydrogenase) fusion K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHU_1630 ldhA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHU_2704 aspB; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CHU_1310 kbl; 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CHU_1021 gcvP; glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CHU_2824 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_0030 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHU_3236 CDP-diacylglycerol-serine-O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CHU_0207 ilvA; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CHU_3297 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CHU_3296 trpB; tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CHU_0590 iscS; putative L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:chu00270]
D CHU_1816 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHU_0685 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHU_1433 metH; methionine synthase I, homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CHU_1434 metH; methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CHU_3320 metE; methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CHU_3400 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CHU_2004 pfs; methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CHU_1653 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CHU_0610 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHU_3479 yedO; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D CHU_3721 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHU_0073 thrA; bifunctional protein: aspartokinase I; homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHU_0139 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHU_0136 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CHU_0274 metC; O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CHU_2639 metC; cystathionine beta-lyase/cystathionine gamma-synthase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CHU_2817 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHU_3020 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CHU_0684 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D CHU_0996 serA; phosphoserine phosphatase and phosphoglycerate dehydrogenase (D-3-phosphoglycerate dehydrogenase) fusion K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHU_1630 ldhA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHU_2704 aspB; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:chu00280]
D CHU_2817 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHU_3183 dxs; 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3590 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHU_1436 leuA; hydroxymethylglutaryl-CoA lyase like protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:chu00290]
D CHU_0207 ilvA; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CHU_3742 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CHU_3743 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CHU_3744 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CHU_3746 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHU_1268 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D CHU_1149 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CHU_3745 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CHU_2817 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHU_3741 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:chu00300]
D CHU_3721 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHU_0073 thrA; bifunctional protein: aspartokinase I; homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHU_0139 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHU_1312 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CHU_2563 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CHU_2022 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CHU_3083 astC; aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHU_0127 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CHU_0765 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CHU_3289 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CHU_0708 transcriptional regulator with DNA-binding domain and aminotransferase domains K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CHU_2745 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHU_0699 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CHU_3724 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:chu00310]
D CHU_0053 dhaL; NAD+-dependent aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D CHU_3361 sucB; 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHU_2527 pdhC; dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1408 caiA; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_0914 yneI; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:chu00220]
D CHU_3080 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHU_3088 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHU_3637 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CHU_1261 ureC; urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CHU_1260 ureA; urea amidohydrolase (urease) gamma subunit and beta subunit fusion K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D CHU_1741 yneH; L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CHU_2502 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1734 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1735 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_3278 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CHU_3134 carA; carbamoyl-phosphate synthetase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHU_3086 argB; N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CHU_3081 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CHU_3083 astC; aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHU_3087 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:chu00330]
D CHU_1576 speA; arginine decarboxylase, biosynthetic K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CHU_0827 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CHU_2512 cnhA; carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CHU_3637 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CHU_0647 hemL; aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CHU_0937 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CHU_0720 pdh; proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D CHU_0703 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:chu00340]
D CHU_1862 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CHU_2337 hisI; histidine biosynthesis bifunctional protein: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CHU_1272 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CHU_1271 hisH; imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CHU_1273 hisF; imidazole glycerol phosphate synthase, subunit B K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CHU_1270 hisB; bifunctional protein: histidinol-phosphatase; imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CHU_1269 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHU_1861 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CHU_3062 hutG; formiminoglutamase-related protein K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:chu00350]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHU_1269 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHU_1246 adhP; zinc-type alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CHU_0914 yneI; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:chu00360]
D CHU_3025 phhA; Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CHU_2125 paaK; phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CHU_1564 paaE; phenylacetate-CoA oxygenase/reductase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D CHU_2019 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHU_1269 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:chu00380]
D CHU_1409 Tryptophan 2,3-dioxygenase apoenzyme K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D CHU_3380 kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D CHU_3381 iscS; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D CHU_3382 nbaC; 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D CHU_3361 sucB; 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHU_2527 pdhC; dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1408 caiA; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_2836 katE; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:chu00400]
D CHU_0718 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CHU_2703 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CHU_3226 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CHU_0717 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CHU_0369 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CHU_3290 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHU_3291 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CHU_3292 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CHU_3294 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CHU_3293 trpC; indole-3-glycerolphosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CHU_3297 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CHU_3296 trpB; tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CHU_0719 pheB; 3-deoxy-7-phosphoheptulonate synthase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D CHU_0764 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHU_1269 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHU_3025 phhA; Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:chu00410]
D CHU_3834 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CHU_3835 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
D CHU_2439 pntA; pyridine nucleotide transhydrogenase, alpha subunit K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CHU_1995 alaDH; L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D CHU_2787 phnP; metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:chu00450]
D CHU_1433 metH; methionine synthase I, homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CHU_1434 metH; methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CHU_3320 metE; methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CHU_0975 cysteine desulfurase / L-selenocysteine selenide-lyase (L-alanine-forming) K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CHU_1815 sufS; cysteine desulfurase / L-selenocysteine selenide-lyase (L-alanine-forming) K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CHU_1778 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CHU_0635 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CHU_0636 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CHU_2689 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:chu00460]
D CHU_2268 bglX; b-glucosidase, glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_2273 bglX; candidate b-glucosidase, Glycoside Hydrolase Family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3784 bglX; candidate b-glucosidase, Glycoside Hydrolase Family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3577 bglX; b-glucosidase, glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3811 blgA; broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D CHU_3633 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:chu00470]
D CHU_3724 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CHU_0924 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHU_1741 yneH; L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CHU_2624 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CHU_1088 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CHU_2741 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHU_2140 tfdD; mandelate racemase/muconate lactonizing enzyme family; possible chloromuconate cycloisomerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D CHU_1670 murI; L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D CHU_0127 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CHU_3289 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:chu00480]
D CHU_0576 pepN; membrane alanine aminopeptidase (aminopeptidase N) K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CHU_1228 icd; isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CHU_1404 gnd; 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CHU_1579 btuE; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:chu00540]
D CHU_1036 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acetyltransferase) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CHU_1037 lpxC; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CHU_1038 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CHU_0615 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CHU_1391 lpxB; lipid A disaccharide synthase, glycosyltransferase family 19 protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CHU_1804 lpxK; lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CHU_0298 sugar phosphate isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CHU_2589 kdsA; 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CHU_3312 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CHU_2845 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-3-deoxy-D-manno-octulosonate transferase) K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CHU_2726 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase, glycosyltransferase family 30 protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CHU_2280 htrB; lipid A biosynthesis lauroyl acyltransferase (heat shock protein) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CHU_1078 waaM; lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CHU_2237 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D CHU_0355 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CHU_0783 rfaE; D-alpha,beta-D-heptose 7-phosphate 1-kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D CHU_1575 hisB; D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CHU_3832 rfaE; D-beta-D-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D CHU_1387 rfaD; ADP-glyceromanno-heptose 6-epimerase precursor K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CHU_0602 lipid A core--O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:chu00541]
D CHU_2411 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHU_0850 rfbB; dTDP-glucose 4,6 dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHU_3394 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHU_0901 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CHU_3390 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHU_0020 rfbA; glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHU_3391 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_3393 rfbB; dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_0900 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_3843 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHU_0494 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CHU_3000 wecE; lipopolysaccharide biosynthesis protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D CHU_2998 acetyltransferase, GNAT family K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D CHU_0467 manA; mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CHU_3484 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CHU_0300 manC; mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CHU_0059 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CHU_0060 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CHU_2775 wecB; UDP-N-acetyl glucosamine -2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CHU_2766 UDP-N-acetylglucosamine 4; UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CHU_2760 polysaccharide biosynthesis protein; possible glycosyltransferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CHU_2761 kdsB; CMP-N-acetylneuraminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CHU_3392 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CHU_0833 galE; UDP-galactose-4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:chu00550]
D CHU_1552 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHU_2214 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHU_2738 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CHU_0924 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHU_2741 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHU_2745 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHU_0699 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CHU_3724 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CHU_2581 dgkA; diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D CHU_3411 uppS; undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHU_0949 bacA; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHU_1919 ybjG; membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHU_2742 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHU_2739 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CHU_1314 mtgA; candidate monofunctional peptidoglycan glycosyltransferase, Glycosyltransferase Family 51 protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CHU_1252 mrcA; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_3131 ponA; bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_0176 candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_1888 mrcA; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_1192 pbpC; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CHU_3305 mrdA; peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CHU_2746 ftsI; cell division protein, penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CHU_1364 dacB; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:chu00552]
D CHU_0949 bacA; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHU_1919 ybjG; membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:chu00543]
D CHU_0913 wca; a-glycosyltransferase-related protein, glycosyltransferase family 4 protein K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D CHU_0907 probable acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D CHU_2487 algI; alginate O-acetylation protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CHU_1816 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHU_0685 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:chu00730]
D CHU_0240 thiC; hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CHU_0241 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CHU_3485 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHU_0244 thiH; tyrosine lyase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CHU_3643 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CHU_0243 thiG; thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CHU_0242 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CHU_0246 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CHU_2521 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CHU_2727 yjeQ; ribosome-dependent GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CHU_0068 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:chu00740]
D CHU_0931 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CHU_0203 ribD; bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CHU_3720 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CHU_1926 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CHU_0947 ribF; bifunctional protein: riboflavin kinase; FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:chu00750]
D CHU_1775 pdxH; Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CHU_2704 aspB; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CHU_3403 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CHU_0075 thrC; L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:chu00760]
D CHU_3729 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CHU_0932 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHU_0598 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CHU_2417 glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CHU_2424 nadV; nicotinamide phosphoribosyl transferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D CHU_2345 npdA; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CHU_3408 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CHU_0914 yneI; aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:chu00770]
D CHU_3746 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHU_1268 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D CHU_1149 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CHU_3745 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CHU_3218 panB; ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CHU_3835 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CHU_3272 transcriptional regulator, Bvg accessory factor family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CHU_3015 coaBC; DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CHU_2667 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CHU_2441 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CHU_2126 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CHU_0758 conserved hypothetical protein; possible 4'-phosphopantetheinyl transferase family protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CHU_1590 conserved hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D CHU_2817 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHU_3834 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:chu00780]
D CHU_1397 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHU_2863 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHU_2123 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_0327 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_1085 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_1091 hdhA; 7-alpha-hydroxysteroid dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_2110 fabZ; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHU_0969 fabA; 3-hydroxydecanoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHU_3011 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CHU_2978 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CHU_2976 bioA; aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CHU_2977 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CHU_2466 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CHU_0611 birA; biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:chu00785]
D CHU_0466 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CHU_3189 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3718 acoA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CHU_2680 adhB; pyruvate dehydrogenase E1 component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CHU_1755 pdhC; dihydrolipoyllysine-residue acetyltransferase (dihydrolipoamide S-acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CHU_3362 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CHU_3361 sucB; 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHU_2527 pdhC; dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CHU_3183 dxs; 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CHU_1021 gcvP; glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CHU_2824 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHU_0030 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:chu00790]
D CHU_0955 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CHU_1059 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CHU_1333 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CHU_0761 folQ; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CHU_2468 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CHU_3223 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CHU_1569 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CHU_1542 folC; tetrahydrofolylpolyglutamate synthase (folylpolyglutamate synthetase) K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CHU_0931 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CHU_1808 pabB; p-aminobenzoate synthetase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CHU_1302 pabC; branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CHU_1390 ygcM; probable 6-pyruvoyltetrahydropterin synthase (6-pyruvoyl tetrahydrobiopterin) synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CHU_0956 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CHU_3388 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CHU_3025 phhA; Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CHU_1715 conserved hypothetical protein; possible organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CHU_1322 moaA; GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CHU_1330 moaC; GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CHU_1324 moaE; molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CHU_1329 moeA; molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CHU_1326 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:chu00670]
D CHU_1569 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CHU_1716 folD; 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CHU_3633 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHU_3310 purN; formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CHU_3309 purH; IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHU_1570 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CHU_2824 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHU_1433 metH; methionine synthase I, homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CHU_1434 metH; methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CHU_1289 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CHU_3078 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CHU_1435 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CHU_0687 ygfA; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:chu00860]
D CHU_3373 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CHU_0333 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CHU_0936 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CHU_0646 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CHU_0492 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CHU_0169 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CHU_0774 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CHU_1918 hemF; coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CHU_1144 hemN; O2-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D CHU_1574 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CHU_3490 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CHU_2636 cysG; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CHU_2635 cysG; precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CHU_2204 cox15; polyprenyltransferase (cytochrome oxidase assembly factor) K02257 COX10; heme o synthase [EC:2.5.1.141]
D CHU_2205 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CHU_2831 pduO; probable cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CHU_3739 yifB; magnesium chelatase, subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:chu00130]
D CHU_2710 ubiE; demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CHU_1758 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CHU_1759 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CHU_1877 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CHU_1897 menB; 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CHU_1757 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D CHU_0326 menA; 1,4-dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:chu00900]
D CHU_3643 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CHU_2996 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CHU_3100 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CHU_1210 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CHU_3180 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CHU_2192 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CHU_0087 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_0674 idi; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CHU_0461 ispA; geranyltranstransferase (farnesyl-diphosphate synthase) K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CHU_2276 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CHU_3411 uppS; undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHU_1393 Zn-dependent protease with chaperone function K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:chu00906]
D CHU_2038 crtZ; beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:chu00907]
D CHU_1436 leuA; hydroxymethylglutaryl-CoA lyase like protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CHU_3590 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CHU_1894 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHU_1895 tktC; transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:chu00523]
D CHU_3390 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHU_0020 rfbA; glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHU_3391 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_3393 rfbB; dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_0900 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_3843 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHU_0494 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CHU_1758 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CHU_3391 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_3393 rfbB; dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_0900 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:chu00946]
D CHU_2268 bglX; b-glucosidase, glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_2273 bglX; candidate b-glucosidase, Glycoside Hydrolase Family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3784 bglX; candidate b-glucosidase, Glycoside Hydrolase Family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3577 bglX; b-glucosidase, glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3811 blgA; broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:chu00261]
D CHU_0635 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CHU_0636 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CHU_3721 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHU_0073 thrA; bifunctional protein: aspartokinase I; homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CHU_0139 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHU_1312 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CHU_2563 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:chu00521]
D CHU_1875 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHU_0998 pgm; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CHU_3258 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CHU_3390 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHU_0020 rfbA; glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHU_3391 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_3393 rfbB; dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_0900 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_3843 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHU_0494 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CHU_1875 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:chu00525]
D CHU_3390 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHU_0020 rfbA; glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHU_3391 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_3393 rfbB; dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHU_0900 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:chu00401]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHU_1269 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CHU_3290 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHU_3291 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CHU_2469 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHU_2123 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_0327 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_1085 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_1091 hdhA; 7-alpha-hydroxysteroid dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_3011 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CHU_2116 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CHU_0385 dltC; acyl carrier protein K02078 acpP; acyl carrier protein
D CHU_1398 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:chu00999]
D CHU_3400 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CHU_2268 bglX; b-glucosidase, glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_2273 bglX; candidate b-glucosidase, Glycoside Hydrolase Family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3784 bglX; candidate b-glucosidase, Glycoside Hydrolase Family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3577 bglX; b-glucosidase, glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CHU_3811 blgA; broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:chu00362]
D CHU_3590 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHU_1584 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CHU_3591 fadB; 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHU_1408 caiA; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CHU_2019 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation [PATH:chu00364]
D CHU_0997 dienelactone hydrolase-related protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:chu00625]
D CHU_1246 adhP; zinc-type alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:chu00361]
D CHU_0997 dienelactone hydrolase-related protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:chu00623]
D CHU_0997 dienelactone hydrolase-related protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D CHU_1584 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:chu00633]
D CHU_3487 NADH:flavin oxidoreductase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D CHU_3590 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D CHU_1261 ureC; urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CHU_1260 ureA; urea amidohydrolase (urease) gamma subunit and beta subunit fusion K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00930 Caprolactam degradation
D CHU_3561 pgl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CHU_1584 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:chu00626]
D CHU_1246 adhP; zinc-type alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:chu03020]
D CHU_3169 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHU_3168 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHU_3136 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CHU_0356 conserved hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:chu03010]
D CHU_1951 rpsA; SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D CHU_3037 rpsB; SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D CHU_3156 rpsC; SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D CHU_3137 rpsD; SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D CHU_3145 rpsE; SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D CHU_2591 rpsF; SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D CHU_3165 rpsG; SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D CHU_3148 rpsH; SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D CHU_3038 rpsI; SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D CHU_3163 rpsJ; SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D CHU_3138 rpsK; SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D CHU_3166 rpsL; SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D CHU_3139 rpsM; SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D CHU_3149 rpsN; SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D CHU_1787 rpsO; SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D CHU_0117 rpsP; SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D CHU_3153 rpsQ; SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D CHU_2592 rpsR; SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D CHU_3158 rpsS; SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CHU_1851 rpsT; SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D CHU_3397 rpsU; SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CHU_3172 rplA; LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D CHU_3159 rplB; LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D CHU_3162 rplC; LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D CHU_3161 rplD; LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D CHU_3150 rplE; LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D CHU_3147 rplF; LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D CHU_3170 rplL; LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CHU_2593 rplI; LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D CHU_3171 rplJ; LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D CHU_3173 rplK; LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D CHU_3039 rplM; LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D CHU_3152 rplN; LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D CHU_3143 rplO; LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D CHU_3155 rplP; LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D CHU_3135 rplQ; LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D CHU_3146 rplR; LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D CHU_0120 rplS; LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D CHU_1645 rplT; LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D CHU_0453 rplU; LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D CHU_3157 rplV; LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D CHU_3160 rplW; LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D CHU_3151 rplX; LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D CHU_2626 rplY; LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D CHU_0454 rpmA; LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D CHU_0648 rpmB; LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D CHU_3154 rpmC; LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D CHU_3144 rpmD; LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D CHU_0489 rpmE; LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D CHU_1625a rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CHU_0649 rpmG; LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D CHU_0096 rpmH; LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D CHU_1644a rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CHU_r16S01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r16S02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r16S03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r23S01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHU_r23S03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHU_r23S02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHU_r5S01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHU_r5S03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHU_r5S02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:chu00970]
D CHU_tAla01 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHU_tAla02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHU_tArg01 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHU_tArg03 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHU_tArg04 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHU_tArg02 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHU_tAsn01 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CHU_tAsp01 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CHU_tCys01 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CHU_tGln01 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CHU_tGlu01 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CHU_tGlu02 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CHU_tGly02 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHU_tGly01 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHU_tHis01 tRNA-His K14226 tRNA-His; tRNA His
D CHU_tIle01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CHU_tLeu04 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHU_tLeu02 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHU_tLeu01 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHU_tLeu03 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHU_tLys01 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CHU_tLys02 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CHU_tMet02 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHU_tMet03 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHU_tMet01 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHU_tPhe01 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CHU_tPhe02 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CHU_tPro01 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHU_tPro02 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHU_tSer01 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHU_tSer02 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHU_tSer03 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHU_tThr03 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHU_tThr01 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHU_tThr02 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHU_tTrp01 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CHU_tTyr01 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CHU_tPseudo01 pseudogene K14236 tRNA-Tyr; tRNA Tyr
D CHU_tVal01 tRNA-Val K14237 tRNA-Val; tRNA Val
D CHU_3373 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CHU_0025 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CHU_2168 gatA; Asp-tRNAAsn/Glu-tRNAGln amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CHU_1447 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CHU_2829 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CHU_1446 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHU_0111 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHU_3176 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CHU_3489 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CHU_1643 thrS; threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHU_3604 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHU_3418 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHU_2689 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHU_1570 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CHU_2435 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHU_1287 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHU_3676 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHU_0741 lysU; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHU_1577 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHU_3228 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHU_2673 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHU_3247 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHU_1130 pheS; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHU_1536 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHU_1002 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:chu03060]
D CHU_3142 secY; protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CHU_3174a secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D CHU_1825 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D CHU_0113 secDF; protein translocase subunit secD / protein translocase subunit secF K12257 secDF; SecD/SecF fusion protein
D CHU_2443 yajC; protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CHU_2557 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHU_0128 secA; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHU_2754 ffh; signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHU_0651 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CHU_0024 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D CHU_1459 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D CHU_3632 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CHU_1460 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CHU_2564 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CHU_2565 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CHU_3677 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:chu04122]
D CHU_3485 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHU_1602 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHU_1324 moaE; molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CHU_1322 moaA; GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CHU_1323 hypothetical protein K03636 moaD; sulfur-carrier protein
D CHU_0245 thiF; thiamine biosynthesis protein (HesA/MoeB/ThiF family protein) K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CHU_1330 moaC; GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CHU_0239 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:chu03018]
D CHU_3133 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHU_1786 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CHU_1006 rhlE; possible ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1819 deaD; ATP-dependent RNA helicase protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_2570 rhlE; possible ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1885 rhlE; possible ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1455 rhlE; possible ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1658 DEAD box-related helicase (ATP-dependent RNA helicase) K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_0462 rnr; RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHU_1598 deaD; ATP-dependent RNA helicase (cold-shock DEAD-box protein A) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_3115 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_0655 dbpA; ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_0297 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHU_2232 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHU_3603 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CHU_1127 HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CHU_2773 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHU_3101 dnaK; chaperone protein (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D CHU_1828 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHU_1414 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:chu03030]
D CHU_1347 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_1680 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_0009 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_0094 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHU_1233 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHU_0491 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHU_1537 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHU_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHU_1349 dnaB; primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CHU_0927 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CHU_3685 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHU_2706 rnhA; RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CHU_2825 rnhB; RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CHU_1313 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:chu03410]
D CHU_3695 nth; DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CHU_2586 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CHU_3686 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CHU_1611 3mgh; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CHU_3497 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CHU_2061 xthA; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CHU_3668 recJ; exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHU_1313 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:chu03420]
D CHU_3453 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CHU_3698 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CHU_0158 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CHU_0008 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CHU_0175 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D CHU_1554 uvrD; ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHU_3266 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHU_1313 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:chu03430]
D CHU_0147 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CHU_2648 mutS; DNA-mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D CHU_0014 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CHU_1554 uvrD; ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHU_3266 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHU_3317 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CHU_3316 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CHU_3668 recJ; exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHU_3685 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHU_0094 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHU_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHU_1233 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHU_1537 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHU_0491 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHU_1347 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_1680 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_0009 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_1313 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:chu03440]
D CHU_3668 recJ; exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHU_3685 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHU_3717 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D CHU_3301 recO; DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CHU_1045 recR; recombination protein K06187 recR; recombination protein RecR
D CHU_3045 recA; DNA recombination protein K03553 recA; recombination protein RecA
D CHU_0028 ruvA; Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CHU_0373 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CHU_2183 ruvC; crossover junction endodeoxyribonuclease (Holliday junction nuclease) K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CHU_3682 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CHU_0094 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHU_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHU_1233 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHU_1537 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHU_0491 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHU_1347 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_1680 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_0009 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_2597 priA; primosomal protein N'(replication factor Y)(possible helicase) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:chu03450]
D CHU_2838 conserved hypothetical protein K10979 ku; DNA end-binding protein Ku
D CHU_2837 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:chu03250]
D CHU_1613 ppiA; peptidyl-prolyl cis-trans isomerase, cyclophilin-binding protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:chu02010]
D CHU_1969 nrtA; ABC-type nitrate/sulfonate/taurine/bicarbonate transporter, substrate binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CHU_1968 nrtB; nitrate ABC transporter, permease component K15577 nrtB; nitrate/nitrite transport system permease protein
D CHU_1967 msmK; ABC-type nitrate transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CHU_1966 nrtD; ABC type nitrate transporter, ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D CHU_3635 modF; possible ABC-type molybdenum transporter, ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D CHU_2984 ABC transporter, permease component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CHU_0751 ABC transporter-related permease with MCE domain K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CHU_2194 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CHU_2986 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CHU_2195 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CHU_2985 rsaD; ABC-type organic solvent transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CHU_3818 pstS; phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D CHU_3819 pstC; phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D CHU_3820 pstA; phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D CHU_3821 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CHU_2871 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CHU_1255 livG; amino acid/amide ABC transporter substrate-binding protein, HAAT family K11959 urtA; urea transport system substrate-binding protein
D CHU_1256 livH; amino acid/amide ABC transporter membrane protein 1, HAAT family K11960 urtB; urea transport system permease protein
D CHU_1257 livM; amino acid/amide ABC transporter membrane protein 2, HAAT family K11961 urtC; urea transport system permease protein
D CHU_1258 livG; urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D CHU_1259 livF; urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D CHU_2025 mtsA; Mn/Zn ABC transporter, substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CHU_2027 troC; Mn2+/Zn2+ ABC transporter, permease K11708 troC; manganese/zinc/iron transport system permease protein
D CHU_2028 mntD; Mn2+/Zn2+ ABC transporter, permease K11709 troD; manganese/zinc/iron transport system permease protein
D CHU_2026 Mn/Zn ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CHU_0847 polysaccharide ABC transporter, permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D CHU_0848 rgpD; polysaccharide ABC transporter, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CHU_1572 ABC transporter, permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CHU_3628 lipoprotein ABC transporter, permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CHU_2233 rsaD; ABC-type lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CHU_3245 ccmC; possible ABC transport permease, cytochrome c biogenesis K02195 ccmC; heme exporter protein C
D CHU_3246 ccmB; possible ABC transport permease, cytochrome c biogenesis K02194 ccmB; heme exporter protein B
D CHU_1788 conserved hypothetical protein; possible permease K07091 lptF; lipopolysaccharide export system permease protein
D CHU_1198 conserved hypothetical protein; possible permease K11720 lptG; lipopolysaccharide export system permease protein
D CHU_3669 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CHU_0951 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHU_2531 ftsE; cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CHU_0506 rsaD; ABC transporter, ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CHU_2448 rsaD; ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CHU_0313 rsaD; ABC transporter, ATP-binding/membrane-spanning protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:chu03070]
D CHU_2659 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D CHU_0113 secDF; protein translocase subunit secD / protein translocase subunit secF K12257 secDF; SecD/SecF fusion protein
D CHU_3174a secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D CHU_1825 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D CHU_3142 secY; protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CHU_2443 yajC; protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CHU_2557 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHU_0128 secA; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHU_0651 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CHU_2754 ffh; signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHU_0024 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D CHU_1459 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D CHU_3632 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CHU_1460 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CHU_0660 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:chu02020]
D CHU_3041 phoR; two-component sensor histidine kinase, phosphate regulation K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHU_3042 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CHU_3818 pstS; phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D CHU_1501 cusB; possible component of copper transport system K07798 cusB; membrane fusion protein, copper/silver efflux system
D CHU_1502 cusB; possible component of copper transport system K07798 cusB; membrane fusion protein, copper/silver efflux system
D CHU_1504 cusA; heavy metal efflux pump protein K07787 cusA; copper/silver efflux system protein
D CHU_1986 kdpD; sensor kinase for the kdp operon K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CHU_1982 kdpA; potassium-transporting ATPase, subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CHU_1983 kdpB; potassium-transporting ATPase, subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CHU_1984 kdpC; potassium-transporting ATPase, subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CHU_2205 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CHU_3008 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHU_0915 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CHU_3598 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CHU_3572 glnK; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CHU_2502 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1734 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1735 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_0334 sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D CHU_0362 zraR; two-component response regulator for zraP K07713 zraR; two-component system, NtrC family, response regulator HydG
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_3177 rpoN; RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D CHU_1987 covS; PAS/PAC sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CHU_2079 cheR; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHU_1237 chemotaxis response regulator (methyltransferase) K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D CHU_2078 cheB; protein-glutamate methylesterase (chemotaxis-specific methylesterase) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHU_1235 phytochrome-like protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D CHU_1741 yneH; L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CHU_0559 cyc; cytochrome c551/c552 K08738 CYC; cytochrome c
D CHU_1138 cyo; cytochrome c oxidase, cbb3-type K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D CHU_1140 cytC; cytochrome c, mono- and diheme variant K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CHU_2659 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D CHU_2882 yccZ; polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CHU_0845 wza; probable polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CHU_0879 wza; protein involved in gliding motility EpsA K01991 wza; polysaccharide biosynthesis/export protein
D CHU_3844 periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein
D CHU_2721 ptpA; protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CHU_2885 wzc; possible tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_0846 wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_0880 wzc; protein involved in gliding motility EpsB K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_2775 wecB; UDP-N-acetyl glucosamine -2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CHU_1655 cel; non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_1842 cel; candidate retaining b-glycosidase, glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_2103 cel; endoglucanase, glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_1107 CHU large protein; endoglucanase, glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_1280 cel; non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_0778 glycosylhydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_1727 cel; endoglucanase-related protein, glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_2235 endoglucanase-related protein, glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CHU_3562 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CHU_0262 RNA polymerase sigma factor (possible RNA polymerase sigma-24 factor) K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CHU_3563 Fe2+-dicitrate sensor, membrane component K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CHU_3637 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:chu02024]
D CHU_3290 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHU_3291 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CHU_2871 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CHU_3595 fadD; long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHU_0353 CHU large protein; candidate b-mannanase, glycoside hydrolase family 26 protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D CHU_0203 ribD; bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CHU_3699 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CHU_2861 outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D CHU_0539 cusC; outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CHU_3498 oppA; oligopeptide ABC transporter, solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CHU_3225 dppB; dipeptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CHU_2180 dppC; oligopeptide ABC transporter, permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CHU_0463 yliA; ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CHU_2557 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHU_0113 secDF; protein translocase subunit secD / protein translocase subunit secF K12257 secDF; SecD/SecF fusion protein
D CHU_3174a secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D CHU_1825 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D CHU_3142 secY; protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CHU_2443 yajC; protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CHU_0128 secA; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHU_0651 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CHU_2754 ffh; signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:chu02030]
D CHU_2078 cheB; protein-glutamate methylesterase (chemotaxis-specific methylesterase) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHU_1237 chemotaxis response regulator (methyltransferase) K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D CHU_2079 cheR; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHU_2629 ompA; outer membrane protein, OmpA family K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:chu02040]
D CHU_2629 ompA; outer membrane protein, OmpA family K02557 motB; chemotaxis protein MotB
D CHU_1785 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D CHU_3177 rpoN; RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CHU_3133 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:chu04980]
D CHU_2831 pduO; probable cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CHU_1433 metH; methionine synthase I, homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CHU_1434 metH; methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:chu01501]
D CHU_0470 nagZ; b-N-acetylglucosaminidase, glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CHU_0942 acrA; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_1145 yegM; possible membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2657 cation or acridine efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2808 membrane fusion protein; possible cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_1146 acrB; acriflavine resistance protein K18138 acrB; multidrug efflux pump
D CHU_2861 outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D CHU_0539 cusC; outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CHU_2659 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D CHU_1252 mrcA; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_3131 ponA; bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_0176 candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_1888 mrcA; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_3305 mrdA; peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CHU_2746 ftsI; cell division protein, penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CHU_1887 beta-lactamase class D K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:chu01502]
D CHU_0924 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHU_3724 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CHU_0699 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CHU_2742 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHU_2739 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:chu01503]
D CHU_0750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHU_1164 amiA; N-acetylmuramoyl-L-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHU_1613 ppiA; peptidyl-prolyl cis-trans isomerase, cyclophilin-binding protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CHU_0942 acrA; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_1145 yegM; possible membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2657 cation or acridine efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2808 membrane fusion protein; possible cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_1146 acrB; acriflavine resistance protein K18138 acrB; multidrug efflux pump
D CHU_2659 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D CHU_1036 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acetyltransferase) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:chu01000]
C 01001 Protein kinases [BR:chu01001]
D CHU_0923 conserved hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CHU_3781 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CHU_1217 anti-sigma regulatory factor; Ser/Thr protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D CHU_0193 conserved hypothetical protein (possible anti-sigma factor) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CHU_2885 wzc; possible tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_0846 wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_0880 wzc; protein involved in gliding motility EpsB K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_3041 phoR; two-component sensor histidine kinase, phosphate regulation K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHU_1986 kdpD; sensor kinase for the kdp operon K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CHU_0334 sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D CHU_1987 covS; PAS/PAC sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CHU_1235 phytochrome-like protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D CHU_1654 chromosome segregation ATPase; intracellular signaling protein K20971 ladS; two-component system, sensor histidine kinase LadS
D CHU_2267 conserved hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS
D CHU_3338 conserved hypothetical protein (predicted membrane-spanning protein) K20971 ladS; two-component system, sensor histidine kinase LadS
D CHU_1899 PAS/PAC sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D CHU_3541 cusS; sensor kinase of copper sensing two-component system K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:chu01009]
D CHU_0610 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHU_2773 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHU_0477 htpG; heat shock protein (chaperone Hsp90) K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:chu01002]
D CHU_3677 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CHU_0934 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CHU_1657 nlpC; cell wall-associated hydrolase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D CHU_1954 nlpC; lipoprotein; possible cell wall-associated hydrolase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D CHU_0057 nlpC; lipoprotein K13695 nlpC; probable lipoprotein NlpC
D CHU_2612 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CHU_3776 gltB; glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CHU_3838 glmS; glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHU_0058 asnB; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHU_3693 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHU_3607 asnB; asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHU_3765 conserved hypothetical protein; possible protease K05520 yhbO; deglycase [EC:3.5.1.124]
D CHU_1417 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D CHU_1418 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D CHU_0359 metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D CHU_2541 protease K07052 K07052; CAAX protease family protein
D CHU_0576 pepN; membrane alanine aminopeptidase (aminopeptidase N) K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CHU_1565 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CHU_1208 conserved hypothetical protein; possible metalloprotease K01400 nprE; bacillolysin [EC:3.4.24.28]
D CHU_3239 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D CHU_3141 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CHU_2358 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CHU_3034 pepP; aminopeptidase P, Metallo peptidase, MEROPS family M24B K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CHU_3417 possible leucine aminopeptidase K00683 QPCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CHU_0613 ftsH; membrane protease FtsH catalytic subunit K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D CHU_1393 Zn-dependent protease with chaperone function K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CHU_3529 htpX; Heat shock protein, Metallo peptidase, MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CHU_2995 yaeL; site-2 protease, Metallo peptidase, MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CHU_2611 membrane protein, with TPR repeat K24131 prsW; protease PrsW [EC:3.4.-.-]
D CHU_0532 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D CHU_2251 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D CHU_1809 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D CHU_1439 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D CHU_3321 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D CHU_1604 conserved hypothetical protein K17734 aprX; serine protease AprX [EC:3.4.21.-]
D CHU_1364 dacB; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CHU_1706 clpP; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CHU_2992 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CHU_3076 umuD; SOS response UmuD protein, Serine peptidase, MEROPS family S24 K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D CHU_1491 umuD; SOS response UmuD protein, Serine peptidase, MEROPS family S24 K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D CHU_2564 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CHU_2565 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CHU_0632 prc; C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CHU_0689 ctpA; C-terminal processing peptidase-3, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CHU_0098 prc; C-terminal processing peptidase-3, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CHU_2467 sppA; signal peptide peptidase A, Serine peptidase, MEROPS family S49 K04773 sppA; protease IV [EC:3.4.21.-]
D CHU_0015 rhomboid family membrane protein K07059 K07059; rhomboid family protein
D CHU_3416 carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CHU_1587 hslV; ATP dependent peptidase CodWX, CodW component, Threonine peptidase, MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CHU_1338 protease, U32 family K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D CHU_1193 conserved hypothetical protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:chu01003]
D CHU_1573 lgtD; b-glycosyltransferase, glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CHU_0569 conserved hypothetical protein, with TPR repeat K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D CHU_0894 a-glycosyltransferase, glycosyltransferase family 4 protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D CHU_1581 glgA; candidate glycogen synthase, Glycosyltransferase Family 3 protein K00693 GYS; glycogen synthase [EC:2.4.1.11]
D CHU_3836 glgA; glycogen synthase (UDP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D CHU_1314 mtgA; candidate monofunctional peptidoglycan glycosyltransferase, Glycosyltransferase Family 51 protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CHU_1192 pbpC; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CHU_1252 mrcA; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_3131 ponA; bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_0176 candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_1888 mrcA; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_0400 otsA; trehalose 6-phosphate synthase / trehalose 6-phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:chu01005]
D CHU_1036 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acetyltransferase) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CHU_1391 lpxB; lipid A disaccharide synthase, glycosyltransferase family 19 protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CHU_1037 lpxC; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CHU_1038 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CHU_0615 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CHU_1804 lpxK; lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CHU_2280 htrB; lipid A biosynthesis lauroyl acyltransferase (heat shock protein) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CHU_1078 waaM; lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CHU_2237 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D CHU_2726 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase, glycosyltransferase family 30 protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CHU_2589 kdsA; 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CHU_2845 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-3-deoxy-D-manno-octulosonate transferase) K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CHU_3312 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CHU_0298 sugar phosphate isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CHU_0783 rfaE; D-alpha,beta-D-heptose 7-phosphate 1-kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D CHU_3832 rfaE; D-beta-D-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D CHU_0602 lipid A core--O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D CHU_0355 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CHU_1575 hisB; D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CHU_1387 rfaD; ADP-glyceromanno-heptose 6-epimerase precursor K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CHU_2999 b-glycosyltransferase, glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CHU_2681 yfdH; candidate b-glycosyltransferase, Glycosyltransferase Family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:chu01011]
D CHU_1552 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHU_2214 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHU_2738 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CHU_0924 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHU_2741 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHU_2745 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHU_3724 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D CHU_2624 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CHU_1088 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CHU_3416 carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CHU_2742 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHU_2739 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CHU_0949 bacA; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHU_1919 ybjG; membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHU_1252 mrcA; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_3131 ponA; bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_0176 candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_1888 mrcA; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHU_1192 pbpC; candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, Glycosyltransferase Family 51 protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CHU_3305 mrdA; peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CHU_2746 ftsI; cell division protein, penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CHU_1364 dacB; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CHU_1314 mtgA; candidate monofunctional peptidoglycan glycosyltransferase, Glycosyltransferase Family 51 protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CHU_1417 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D CHU_1418 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D CHU_1657 nlpC; cell wall-associated hydrolase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D CHU_0026 mltD; peptidoglycan-binding lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CHU_3030 mltD; peptidoglycan lytic transglycosylase-related protein, glycoside hydrolase family 23 protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CHU_2792 peptidoglycan-binding lytic transglycosylase-related protein, glycoside hydrolase family 23 protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D CHU_1072 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CHU_0321 ygcC; aminodeoxychorismate lyase-like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CHU_2221 rlpA; rare lipoprotein A-like protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CHU_0750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHU_1164 amiA; N-acetylmuramoyl-L-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:chu01004]
D CHU_2469 fabD; [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHU_1896 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHU_1624 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHU_0390 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHU_1397 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHU_2863 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHU_2123 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_0327 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_1085 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_1091 hdhA; 7-alpha-hydroxysteroid dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHU_2110 fabZ; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHU_0969 fabA; 3-hydroxydecanoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHU_1037 lpxC; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CHU_3011 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CHU_3672 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CHU_1071 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D CHU_1949 conserved hypothetical protein K17362 ACOT13; acyl-coenzyme A thioesterase 13 [EC:3.1.2.-]
D CHU_0715 conserved hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D CHU_1595 fatty acid desaturase (stearoyl-CoA desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CHU_1686 fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CHU_1136 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CHU_3762 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D CHU_3764 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D CHU_2982 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_2429 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHU_3595 fadD; long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHU_1625 plsX; phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CHU_3274 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHU_2690 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CHU_2828 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:chu01006]
D CHU_0461 ispA; geranyltranstransferase (farnesyl-diphosphate synthase) K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CHU_2276 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CHU_3411 uppS; undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHU_2776 miaA; tRNA isopentenyltransferase (delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CHU_0326 menA; 1,4-dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CHU_2204 cox15; polyprenyltransferase (cytochrome oxidase assembly factor) K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:chu01007]
D CHU_3373 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CHU_1536 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHU_1002 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CHU_3418 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHU_1577 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHU_2689 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHU_3676 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHU_2435 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHU_1287 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHU_0741 lysU; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHU_0111 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHU_3176 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CHU_2673 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHU_3489 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CHU_3604 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHU_3228 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHU_1643 thrS; threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHU_1446 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHU_3247 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHU_1130 pheS; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHU_0784 aspB; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHU_0694 ybdL; 2-keto-4-methylthiobutyrate aminotransferase apoenzyme K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D CHU_0765 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CHU_1269 hisC; histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHU_1310 kbl; 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CHU_2978 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CHU_0647 hemL; aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CHU_3083 astC; aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHU_2976 bioA; aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CHU_0936 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CHU_2817 ilvE; branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHU_2704 aspB; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CHU_3000 wecE; lipopolysaccharide biosynthesis protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:chu00194]
D CHU_0337 atpC; ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CHU_0336 atpD; ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CHU_0184 atpG; ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CHU_0183 atpA; ATP synthase, subunit alpha (H(+)-transporting two-sector ATPase) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CHU_0182 atpH; ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CHU_0181 atpF; ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CHU_0180 atpE; ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CHU_0179 atpB; ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:chu03000]
D CHU_1989 transcriptional regulator, AraC family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D CHU_3253 yijO; transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHU_0702 pobR; transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CHU_3826 transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D CHU_2283 conserved hypothetical protein (possible transcriptional regulator) K13653 K13653; AraC family transcriptional regulator
D CHU_3799 ada; DNA-O6-methylguanine--protein-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CHU_3761 oxyR; redox-sensitive transcriptional activator OxyR, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CHU_0940 ycdC; transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D CHU_2862 envR; transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CHU_0252 ycfQ; transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CHU_0979 asnC; transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CHU_0065 lrp; transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHU_3319 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHU_3592 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CHU_1060 rmeD; probable transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D CHU_2032 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D CHU_1703 furR; ferric uptake regulator protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CHU_0706 arsR; transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CHU_0302 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CHU_1365 mntR; transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CHU_2024 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CHU_0611 birA; biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CHU_0810 ydcN; transcriptional regulator K07729 K07729; putative transcriptional regulator
D CHU_2561 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CHU_3626 greA; transcription elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D CHU_0083 pyrR; uracil phosphoribosyltransferase; pyrimidine operon attenuation protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CHU_0488 pyrR; uracil phosphoribosyltransferase/pyrimidine operon attenuation protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CHU_3512 transcriptional regulator K07734 paiB; transcriptional regulator
D CHU_1773 conserved hypothetical protein; possible transcriptional regulator K07735 algH; putative transcriptional regulator
D CHU_2749 conserved hypothetical protein, mraZ-like protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:chu03021]
D CHU_3136 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CHU_3169 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHU_3168 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHU_0356 conserved hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D CHU_1785 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D CHU_0346 rpoE; RNA polymerase, sigma-E factor; heat shock and oxidative stress K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHU_0543 RNA polymerase, ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHU_1195 rpoE; RNA polymerase sigma-24 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHU_2649 rpoE; RNA polymerase, sigma-E factor; heat shock and oxidative stress K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHU_2574 rpoE; RNA polymerase, sigma-E factor; heat shock and oxidative stress K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHU_3562 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CHU_0262 RNA polymerase sigma factor (possible RNA polymerase sigma-24 factor) K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CHU_3177 rpoN; RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D CHU_3421 nusA; transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA
D CHU_2447 nusB; antitermination factor K03625 nusB; transcription antitermination protein NusB
D CHU_3174 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D CHU_1217 anti-sigma regulatory factor; Ser/Thr protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D CHU_1218 possible negative regulator of sigma-B K17762 rsbS; rsbT antagonist protein RsbS
D CHU_1219 positive regulator of sigma-B K17763 rsbR; rsbT co-antagonist protein RsbR
D CHU_2179 rsbU; sigma factor regulation protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D CHU_0447 probable hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D CHU_1702 anti-anti-sigma regulatory factor K04749 rsbV; anti-sigma B factor antagonist
D CHU_0194 spoIIAA; anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D CHU_1913 spoIIA; anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K04749 rsbV; anti-sigma B factor antagonist
D CHU_0193 conserved hypothetical protein (possible anti-sigma factor) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CHU_1631 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CHU_3603 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:chu03019]
D CHU_3689 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CHU_1396 rnc; RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHU_1127 HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CHU_0462 rnr; RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHU_1006 rhlE; possible ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1819 deaD; ATP-dependent RNA helicase protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_2570 rhlE; possible ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1885 rhlE; possible ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1455 rhlE; possible ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1658 DEAD box-related helicase (ATP-dependent RNA helicase) K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CHU_1598 deaD; ATP-dependent RNA helicase (cold-shock DEAD-box protein A) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_3115 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_0655 dbpA; ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_0297 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHU_2232 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHU_3133 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHU_1786 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CHU_3603 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CHU_2773 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHU_3101 dnaK; chaperone protein (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D CHU_1828 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHU_1414 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CHU_3110 hrpB; ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
D CHU_2491 hrpA; ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:chu03011]
D CHU_1951 rpsA; SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D CHU_3037 rpsB; SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D CHU_3156 rpsC; SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D CHU_3137 rpsD; SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D CHU_3145 rpsE; SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D CHU_2591 rpsF; SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D CHU_3165 rpsG; SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D CHU_3148 rpsH; SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D CHU_3038 rpsI; SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D CHU_3163 rpsJ; SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D CHU_3138 rpsK; SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D CHU_3166 rpsL; SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D CHU_3139 rpsM; SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D CHU_3149 rpsN; SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D CHU_1787 rpsO; SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D CHU_0117 rpsP; SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D CHU_3153 rpsQ; SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D CHU_2592 rpsR; SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D CHU_3158 rpsS; SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CHU_1851 rpsT; SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D CHU_3397 rpsU; SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CHU_3172 rplA; LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D CHU_3159 rplB; LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D CHU_3162 rplC; LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D CHU_3161 rplD; LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D CHU_3150 rplE; LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D CHU_3147 rplF; LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D CHU_2593 rplI; LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D CHU_3171 rplJ; LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D CHU_3173 rplK; LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D CHU_3170 rplL; LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CHU_3039 rplM; LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D CHU_3152 rplN; LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D CHU_3143 rplO; LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D CHU_3155 rplP; LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D CHU_3135 rplQ; LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D CHU_3146 rplR; LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D CHU_0120 rplS; LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D CHU_1645 rplT; LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D CHU_0453 rplU; LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D CHU_3157 rplV; LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D CHU_3160 rplW; LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D CHU_3151 rplX; LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D CHU_0454 rpmA; LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D CHU_0648 rpmB; LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D CHU_3154 rpmC; LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D CHU_3144 rpmD; LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D CHU_0489 rpmE; LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D CHU_1625a rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CHU_0649 rpmG; LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D CHU_0096 rpmH; LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D CHU_1644a rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CHU_2626 rplY; LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D CHU_r5S01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHU_r5S03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHU_r5S02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHU_r16S01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r16S02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r16S03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r23S01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHU_r23S03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHU_r23S02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:chu03009]
D CHU_1396 rnc; RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHU_3074 era; GTP-binding protein K03595 era; GTPase
D CHU_0069 yhbZ; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D CHU_3421 nusA; transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA
D CHU_2447 nusB; antitermination factor K03625 nusB; transcription antitermination protein NusB
D CHU_3174 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D CHU_1628 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CHU_0186 sun; tRNA/rRNA cytosine-C5-methylase (sun family protein) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CHU_1597 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CHU_1194 gidB; 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CHU_2748 mraW; S-adenosylmethionine methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CHU_3387 yraL; methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CHU_3401 Tetrapyrrole-related methytransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CHU_0306 trmH; tRNA/rRNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CHU_0670 23S rRNA m(6)A-1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D CHU_2788 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CHU_3712 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CHU_0743 yccW; possible oxidoreductase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CHU_3255 RNA methylase family protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D CHU_3124 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CHU_2518 rumA; 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CHU_0734 rluD; ribosomal large subunit pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CHU_0143 rluB; pseudouridylate synthase (ribosomal large subunit pseudouridine synthase B) K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CHU_3040 rluA; pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CHU_3766 rluC; ribosomal pseudouridine synthase C, large subunit K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CHU_3219 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CHU_3480 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CHU_1012 RNA pseudouridylate synthase, small subunit K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D CHU_1834 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CHU_0118 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CHU_0653 yliG; SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CHU_3276 prmA; [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CHU_3689 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CHU_0692 possible Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CHU_1598 deaD; ATP-dependent RNA helicase (cold-shock DEAD-box protein A) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_3115 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_0655 dbpA; ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHU_2727 yjeQ; ribosome-dependent GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CHU_3073 engA; GTP-binding protein K03977 engA; GTPase
D CHU_3840 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D CHU_2418 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CHU_1704 relA; GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CHU_3629 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CHU_3420 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CHU_0612 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D CHU_3501 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D CHU_3399 conserved hypothetical protein; possible ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D CHU_2219 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
D CHU_1626 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:chu03016]
D CHU_1914 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CHU_2535 cca; tRNA adenylyltransferase (tRNA nucleotidyl transferase) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CHU_2904 conserved hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D CHU_3373 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CHU_3228 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHU_3676 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHU_1287 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHU_2689 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHU_1577 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHU_0741 lysU; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHU_0111 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHU_1446 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHU_3176 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CHU_3489 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CHU_1643 thrS; threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHU_3604 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHU_3418 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHU_2435 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHU_2673 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHU_3247 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHU_1130 pheS; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHU_1536 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHU_1002 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CHU_2815 dtd; D-Tyr-tRNATyr deacyclase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CHU_1632 ycfF; HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CHU_1543 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CHU_0483 truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CHU_0948 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CHU_3485 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHU_2418 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CHU_2776 miaA; tRNA isopentenyltransferase (delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CHU_2030 trmE; tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CHU_3502 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CHU_0638 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CHU_0097 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CHU_2545 kptA; RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D CHU_1845 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D CHU_0109 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CHU_0360 yhdG; tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CHU_1821 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CHU_1737 possible 2-methylthioadenine synthetase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CHU_0119 trmD; tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CHU_2705 SAM-dependent methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CHU_1916 tRNA and rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D CHU_0734 rluD; ribosomal large subunit pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CHU_1602 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHU_1835 conserved hypothetical protein; possible ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CHU_2522 scaffold protein for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D CHU_0762 iscA; Fe-S cluster formation protein K13628 iscA; iron-sulfur cluster assembly protein
D CHU_0627 miaE; hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D CHU_3055 queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CHU_3009 S-adenosylmethionine/tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CHU_1390 ygcM; probable 6-pyruvoyltetrahydropterin synthase (6-pyruvoyl tetrahydrobiopterin) synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CHU_0956 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CHU_1715 conserved hypothetical protein; possible organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CHU_0372 yjeS; iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CHU_1197 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CHU_3018 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CHU_0099 probable peptidase M22, glycoprotease family K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CHU_1957 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CHU_2440 yjeE; ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CHU_0462 rnr; RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHU_1786 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:chu03012]
D CHU_2854 translation initiation factor 1 (eIF-1/SUI1) K03113 EIF1; translation initiation factor 1
D CHU_3422 infB; bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D CHU_1644 infC; bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D CHU_1763 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CHU_2216 yheS; ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CHU_3036 tsf; translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D CHU_3175 tufB; translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CHU_3164 fusA; translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D CHU_3706 prfA; bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D CHU_0578 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CHU_0202 hemG; possible protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CHU_2625 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CHU_3140 infA; bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D CHU_1531 efp; translation elongation factor P (EF-P) K02356 efp; elongation factor P
D CHU_2499 efp; translation elongation factor P (EF-P) K02356 efp; elongation factor P
D CHU_2832 prfB; bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D CHU_1151 yaeJ; peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:chu03110]
D CHU_3123 clpB; heat shock protein with various ATPase domains K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CHU_1079 clpA; ATP-dependent Clp protease, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CHU_1707 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CHU_2990 hslU; ATP-dependent hsl protease, ATP-binding subunit (heat shock protein) K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CHU_0477 htpG; heat shock protein (chaperone Hsp90) K04079 HSP90A; molecular chaperone HtpG
D CHU_3101 dnaK; chaperone protein (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D CHU_2145 yegD; probable heat shock protein K04046 yegD; hypothetical chaperone protein
D CHU_1828 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHU_0071 dnaJ; molecular chaperone, heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D CHU_3803 dnaJ; chaperone protein, dnaJ family K05516 cbpA; curved DNA-binding protein
D CHU_0070 grpE; molecular chaperone, heat shock protein K03687 GRPE; molecular chaperone GrpE
D CHU_0233 hsp20; heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D CHU_1827 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CHU_0613 ftsH; membrane protease FtsH catalytic subunit K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D CHU_0179 atpB; ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CHU_1613 ppiA; peptidyl-prolyl cis-trans isomerase, cyclophilin-binding protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CHU_3268 peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CHU_3663 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CHU_1687 fklB; peptidyl-prolyl cis-trans isomerase (rotamase) K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D CHU_3430 slyD; peptidylprolyl isomerase (FKBP-type peptidyl-prolyl cis-trans isomerase) K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CHU_0191 surA; peptidyl-prolyl cis-trans isomerase (survival protein) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CHU_0192 possible peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CHU_0093 trxA; thioredoxin K03671 TXN; thioredoxin
D CHU_1353 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:chu04131]
D CHU_3648 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHU_2255 conserved hypothetical protein K07192 FLOT; flotillin
D CHU_1341 alf; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CHU_2987 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHU_0251 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHU_2250 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHU_1400 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHU_0477 htpG; heat shock protein (chaperone Hsp90) K04079 HSP90A; molecular chaperone HtpG
D CHU_2003 permease K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:chu04121]
D CHU_3510 superfamily I DNA and RNA helicase K10300 FBH1; F-box DNA helicase 1 [EC:5.6.2.4]
C 03051 Proteasome [BR:chu03051]
D CHU_0477 htpG; heat shock protein (chaperone Hsp90) K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:chu03032]
D CHU_2706 rnhA; RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CHU_2750 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CHU_3687 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHU_3008 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHU_1349 dnaB; primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CHU_0927 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CHU_3685 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHU_0094 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHU_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHU_1537 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHU_0491 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHU_1347 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_1680 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_0009 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_1233 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHU_2825 rnhB; RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CHU_1313 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CHU_1682 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CHU_1413 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CHU_1639 gyrA; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CHU_1614 gyrB; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CHU_2343 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHU_2291 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHU_3602 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:chu03036]
D CHU_1396 rnc; RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHU_1341 alf; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CHU_2255 conserved hypothetical protein K07192 FLOT; flotillin
D CHU_2750 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CHU_3687 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHU_3803 dnaJ; chaperone protein, dnaJ family K05516 cbpA; curved DNA-binding protein
D CHU_3008 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHU_2021 dps; DNA-binding protein; DPS family protein K04047 dps; starvation-inducible DNA-binding protein
D CHU_2076 dps; starvation-inducible DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D CHU_0065 lrp; transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHU_3319 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CHU_1592 smc; chromosome segregation protein, Smc family protein K03529 smc; chromosome segregation protein
D CHU_3644 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D CHU_0142 condensin subunit ScpB K06024 scpB; segregation and condensation protein B
D CHU_2736 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CHU_2531 ftsE; cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CHU_2746 ftsI; cell division protein, penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CHU_2700 ftsK; cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CHU_2737 cell division protein K03589 ftsQ; cell division protein FtsQ
D CHU_2740 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D CHU_0951 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHU_2735 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHU_1128 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D CHU_0750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHU_1164 amiA; N-acetylmuramoyl-L-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHU_0942 acrA; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_1145 yegM; possible membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2657 cation or acridine efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2808 membrane fusion protein; possible cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_0760 divIVA; cell division initiation protein K04074 divIVA; cell division initiation protein
D CHU_3308 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CHU_3307 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CHU_3304 mrdB; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D CHU_2560 soj; chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D CHU_2561 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CHU_1639 gyrA; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CHU_1614 gyrB; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CHU_3502 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CHU_1194 gidB; 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CHU_3398 xerC; integrase K03733 xerC; integrase/recombinase XerC
D CHU_2702 xerD; site-specific recombinase K04763 xerD; integrase/recombinase XerD
D CHU_0926 mrp; Mrp/Nbp35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CHU_2716 yihA; GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:chu03400]
D CHU_1958 phrB; deoxyribodipyrimidine photolyase (photoreactivating enzyme) K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CHU_2586 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CHU_1611 3mgh; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CHU_3686 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CHU_3695 nth; DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CHU_3099 mutT; mutator protein; oxidative damage repair protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CHU_2421 conserved hypothetical protein; possible NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CHU_2664 nudC; NUDIX hydrolase family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CHU_0019 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CHU_3799 ada; DNA-O6-methylguanine--protein-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CHU_1054 conserved hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D CHU_3497 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CHU_2061 xthA; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CHU_2314 recD; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D CHU_3668 recJ; exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHU_1313 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CHU_3698 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CHU_0158 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CHU_0008 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CHU_0175 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D CHU_1554 uvrD; ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHU_3266 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHU_3169 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHU_3168 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHU_3136 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CHU_0356 conserved hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D CHU_3453 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CHU_0147 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CHU_2648 mutS; DNA-mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D CHU_0014 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CHU_3317 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CHU_3316 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CHU_0094 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHU_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHU_1537 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHU_0491 DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHU_1347 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_1680 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_0009 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHU_1233 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHU_3685 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHU_3045 recA; DNA recombination protein K03553 recA; recombination protein RecA
D CHU_0028 ruvA; Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CHU_0373 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CHU_2183 ruvC; crossover junction endodeoxyribonuclease (Holliday junction nuclease) K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CHU_2597 priA; primosomal protein N'(replication factor Y)(possible helicase) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CHU_0040 ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50
D CHU_3614 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D CHU_3717 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D CHU_3682 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CHU_3301 recO; DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CHU_1045 recR; recombination protein K06187 recR; recombination protein RecR
D CHU_3012 recN; DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CHU_1283 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CHU_2838 conserved hypothetical protein K10979 ku; DNA end-binding protein Ku
D CHU_2837 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CHU_1682 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CHU_1413 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CHU_2343 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHU_2291 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHU_2750 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CHU_3687 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHU_0297 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHU_2232 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CHU_1679 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CHU_1492 umuC; nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D CHU_3075 umuC; nucleotidyltransferase/DNA polymerase involved in DNA repair/SOS mutagenesis and repair K03502 umuC; DNA polymerase V
D CHU_3076 umuD; SOS response UmuD protein, Serine peptidase, MEROPS family S24 K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D CHU_1491 umuD; SOS response UmuD protein, Serine peptidase, MEROPS family S24 K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D CHU_3722 recX; regulatory protein RecX K03565 recX; regulatory protein
D CHU_0081 DNA polymerase IV, family X K02347 polX; DNA polymerase (family X)
D CHU_3525 lhr; ATP dependent helicase, Lhr family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CHU_0451 nrdA; ribonucleoside diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CHU_0452 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CHU_2395 conserved hypothetical protein, DHH family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CHU_3649 conserved hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:chu03029]
D CHU_3422 infB; bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D CHU_1644 infC; bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D CHU_3036 tsf; translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D CHU_3175 tufB; translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CHU_3164 fusA; translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D CHU_3074 era; GTP-binding protein K03595 era; GTPase
D CHU_1536 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHU_1287 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHU_0111 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHU_3489 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CHU_1577 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHU_0025 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CHU_2168 gatA; Asp-tRNAAsn/Glu-tRNAGln amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CHU_1447 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CHU_2829 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CHU_3685 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHU_3412 yaeT; outer membrane protein; probable bacterial surface antigen K07277 SAM50; outer membrane protein insertion porin family
D CHU_1917 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D CHU_3101 dnaK; chaperone protein (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D CHU_0070 grpE; molecular chaperone, heat shock protein K03687 GRPE; molecular chaperone GrpE
D CHU_1828 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHU_1827 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CHU_0071 dnaJ; molecular chaperone, heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D CHU_3485 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHU_0926 mrp; Mrp/Nbp35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CHU_2204 cox15; polyprenyltransferase (cytochrome oxidase assembly factor) K02257 COX10; heme o synthase [EC:2.5.1.141]
D CHU_2205 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CHU_2557 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHU_2200 conserved hypothetical protein K07152 SCO1; protein SCO1
D CHU_3569 SPFH domain, Band 7 family protein K17080 PHB1; prohibitin 1
D CHU_0477 htpG; heat shock protein (chaperone Hsp90) K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:chu02000]
D CHU_0506 rsaD; ABC transporter, ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CHU_2448 rsaD; ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CHU_0313 rsaD; ABC transporter, ATP-binding/membrane-spanning protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CHU_2049 rsaD; ABC transporter, ATP-binding/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CHU_0800 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CHU_3635 modF; possible ABC-type molybdenum transporter, ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D CHU_1969 nrtA; ABC-type nitrate/sulfonate/taurine/bicarbonate transporter, substrate binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CHU_1968 nrtB; nitrate ABC transporter, permease component K15577 nrtB; nitrate/nitrite transport system permease protein
D CHU_1967 msmK; ABC-type nitrate transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CHU_1966 nrtD; ABC type nitrate transporter, ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D CHU_2984 ABC transporter, permease component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CHU_0751 ABC transporter-related permease with MCE domain K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CHU_2194 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CHU_2986 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CHU_2195 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CHU_2985 rsaD; ABC-type organic solvent transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CHU_3818 pstS; phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D CHU_3819 pstC; phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D CHU_3820 pstA; phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D CHU_3821 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CHU_2871 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CHU_1255 livG; amino acid/amide ABC transporter substrate-binding protein, HAAT family K11959 urtA; urea transport system substrate-binding protein
D CHU_1256 livH; amino acid/amide ABC transporter membrane protein 1, HAAT family K11960 urtB; urea transport system permease protein
D CHU_1257 livM; amino acid/amide ABC transporter membrane protein 2, HAAT family K11961 urtC; urea transport system permease protein
D CHU_1258 livG; urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D CHU_1259 livF; urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D CHU_3498 oppA; oligopeptide ABC transporter, solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CHU_3225 dppB; dipeptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CHU_2180 dppC; oligopeptide ABC transporter, permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CHU_0463 yliA; ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CHU_1388 yadT; iron ABC transporter, periplasmic-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CHU_1389 fecD; iron (III) ABC transporter, permease K02015 ABC.FEV.P; iron complex transport system permease protein
D CHU_1843 fecE; iron(III) ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CHU_2025 mtsA; Mn/Zn ABC transporter, substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CHU_2027 troC; Mn2+/Zn2+ ABC transporter, permease K11708 troC; manganese/zinc/iron transport system permease protein
D CHU_2028 mntD; Mn2+/Zn2+ ABC transporter, permease K11709 troD; manganese/zinc/iron transport system permease protein
D CHU_2026 Mn/Zn ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CHU_0847 polysaccharide ABC transporter, permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D CHU_0848 rgpD; polysaccharide ABC transporter, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CHU_1788 conserved hypothetical protein; possible permease K07091 lptF; lipopolysaccharide export system permease protein
D CHU_1198 conserved hypothetical protein; possible permease K11720 lptG; lipopolysaccharide export system permease protein
D CHU_3669 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CHU_1546 gldF; protein involved in gliding motility GldF K25151 gldF; gliding motility-associated transport system permease protein
D CHU_1545 gldA; protein involved in gliding motility GldA K25152 gldA; gliding motility-associated transport system ATP-binding protein
D CHU_1547 gldG; protein involved in gliding motility GldG K25153 gldG; gliding motility-associatede transport system auxiliary component
D CHU_1572 ABC transporter, permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CHU_3628 lipoprotein ABC transporter, permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CHU_2233 rsaD; ABC-type lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CHU_3245 ccmC; possible ABC transport permease, cytochrome c biogenesis K02195 ccmC; heme exporter protein C
D CHU_3246 ccmB; possible ABC transport permease, cytochrome c biogenesis K02194 ccmB; heme exporter protein B
D CHU_0951 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHU_2531 ftsE; cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CHU_0486 natB; ABC-type Na+ efflux pump, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHU_0386 ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHU_0485 natA; ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHU_0387 yadG; ABC transporter, ATP-binding protein; GldA-related gliding motility protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHU_1770 ybhF; ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHU_2646 ABC transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CHU_2644 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CHU_0977 sufC; Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CHU_0673 possible lipoprotein transmembrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CHU_0375 conserved hypothetical protein K14715 SLC39A9; solute carrier family 39 (zinc transporter), member 9
D CHU_0723 norM; multidrug resistance protein K26939 norM; MATE family, multidrug efflux pump
D CHU_1656 gluP; glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CHU_0773 fucP; fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CHU_0960 fucP; fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CHU_3606 fucP; fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CHU_1319 possible nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CHU_0266 yajR; tetracycline resistance protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CHU_2159 bcr; drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CHU_3723 permease of the major facilitator superfamily K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CHU_0367 possible permease K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CHU_2003 permease K06902 UMF1; MFS transporter, UMF1 family
D CHU_2640 kch; potassium channel protein K10716 kch; voltage-gated potassium channel
D CHU_3314 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family
D CHU_3571 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family
D CHU_0916 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family
D CHU_3599 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family
D CHU_2655 batA; BatA-like protein, aerotolerance-related protein K07114 yfbK; Ca-activated chloride channel homolog
D CHU_1908 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D CHU_3740 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D CHU_1961 mscL; mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CHU_2162 yjeP; probable periplasmic binding protein; possible mechanosensitive ion channel component K05802 mscK; potassium-dependent mechanosensitive channel
D CHU_3343 aefA; mechanosensitive ion channel protein K05802 mscK; potassium-dependent mechanosensitive channel
D CHU_1199 yggB; mechanosensitive ion channel component K03442 mscS; small conductance mechanosensitive channel
D CHU_1245 ion channel protein K03442 mscS; small conductance mechanosensitive channel
D CHU_1629 magnesium transporter, MgtE K06213 mgtE; magnesium transporter
D CHU_2629 ompA; outer membrane protein, OmpA family K02557 motB; chemotaxis protein MotB
D CHU_2018 exbB; outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CHU_3579 exbB; outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CHU_3580 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD
D CHU_3662 corA; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D CHU_1662 crcB; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D CHU_0993 conserved hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D CHU_0696 conserved hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D CHU_2382 conserved hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D CHU_1817 conserved hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D CHU_1506 cation-transporting ATPase K08364 merP; periplasmic mercuric ion binding protein
D CHU_1532 cation-transporting ATPase K08364 merP; periplasmic mercuric ion binding protein
D CHU_3324 conserved hypothetical protein K08364 merP; periplasmic mercuric ion binding protein
D CHU_3684 hemolysin-related protein; gliding motility protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CHU_1383 conserved hypothetical protein; possible transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CHU_0187 ompA; peptidoglycan-associated outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CHU_0217 ompA; outer membrane protein, porin F precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CHU_1585 outer membrane protein, OmpA family K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CHU_2436 yiaD; possible outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CHU_3521 fadL; long-chain fatty acid transport protein, outer membrane protein K06076 fadL; long-chain fatty acid transport protein
D CHU_0312 fecA; iron(III) dicitrate transport protein, outer membrane receptor K16091 fecA; Fe(3+) dicitrate transport protein
D CHU_1607 outer membrane protein, TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D CHU_0733 yncD; probable tonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHU_3709 conserved hypothetical protein; possible outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHU_0198 ybiL; probable outer membrane receptor for iron transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHU_0587 chuA; hemin uptake system outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CHU_0829 czcC; outer membrane protein; cation efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CHU_3231 outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CHU_1503 conserved hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CHU_2659 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D CHU_2861 outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D CHU_0539 cusC; outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CHU_2882 yccZ; polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CHU_0845 wza; probable polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CHU_0879 wza; protein involved in gliding motility EpsA K01991 wza; polysaccharide biosynthesis/export protein
D CHU_3844 periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein
D CHU_3412 yaeT; outer membrane protein; probable bacterial surface antigen K07277 SAM50; outer membrane protein insertion porin family
D CHU_1917 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D CHU_3017 TPR repeat protein K05807 bamD; outer membrane protein assembly factor BamD
D CHU_0166 outer membrane protein K07278 tamA; translocation and assembly module TamA
D CHU_1700 ybgR; possible cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CHU_0831 czcA; cation eflux protein K15726 czcA; heavy metal efflux system protein
D CHU_1512 cation efflux protein K15726 czcA; heavy metal efflux system protein
D CHU_0161 cusA; possible copper transport protein K15726 czcA; heavy metal efflux system protein
D CHU_1504 cusA; heavy metal efflux pump protein K07787 cusA; copper/silver efflux system protein
D CHU_1146 acrB; acriflavine resistance protein K18138 acrB; multidrug efflux pump
D CHU_2513 acrD; cation/multidrug efflux pump K18989 vexF; multidrug efflux pump
D CHU_0285 integral membrane protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CHU_3699 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CHU_3331 conserved hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D CHU_1403 gntT; high-affinity gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D CHU_1979 chaA; calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D CHU_1876 nhaA; sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family
D CHU_3839 nhaP; sodium/proton antiporter, CPA1 family K24163 nhaK; monovalent cation/hydrogen antiporter
D CHU_1841 cvrA; potassium/proton antiporter, CPA1 family K11105 cvrA; potassium/hydrogen antiporter
D CHU_1783 nhaP; sodium/proton antiporter, CPA1 family K03316 nhaP; Na+:H+ antiporter
D CHU_0626 sodium/proton antiporter, CPA1 family K03316 nhaP; Na+:H+ antiporter
D CHU_3068 kefB; Kef-type potassium/proton antiporter, CPA2 family K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D CHU_3069 yheR; Kef-type potassium/proton antiporter accessory protein, CPA2 family K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D CHU_0821 nhaA; transporter, CPA2 family K26735 KEA4_5_6; K+:H+ antiporter
D CHU_2633 napA; transporter, CPA2 family K26730 napA; Na+:H+ antiporter
D CHU_3520 transporter, CPA2 family K26731 CHX; K+:H+ antiporter
D CHU_3116 yadQ; chloride channel protein K03281 clcA; chloride channel protein, CIC family
D CHU_3423 chrA; chromate transporter, permease component K07240 chrA; chromate transporter
D CHU_2155 chrA; chromate transporter, permease component K07240 chrA; chromate transporter
D CHU_0671 ychM; sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D CHU_1516 arsenite efflux transporter K03325 ACR3; arsenite transporter
D CHU_3426 kup; low affinity potassium transport system K03549 kup; KUP system potassium uptake protein
D CHU_1915 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CHU_1290 integral membrane protein K22736 VIT; vacuolar iron transporter family protein
D CHU_1407 conserved hypothetical protein; possible MarC family, integral membrane protein K05595 marC; multiple antibiotic resistance protein
D CHU_2740 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D CHU_1244 conserved hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D CHU_2015 tonB; outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB
D CHU_0419 tonB-related protein K03832 tonB; periplasmic protein TonB
D CHU_2717 tonB-related protein K03832 tonB; periplasmic protein TonB
D CHU_0125 pal; outer membrane protein, peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D CHU_1429 tolB; tol biopolymer transport system, periplasmic protein K03641 tolB; TolB protein
D CHU_0830 czcB; cation eflux system protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CHU_1511 yegM; possible membrane-fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CHU_0162 cation efflux system protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CHU_1501 cusB; possible component of copper transport system K07798 cusB; membrane fusion protein, copper/silver efflux system
D CHU_1502 cusB; possible component of copper transport system K07798 cusB; membrane fusion protein, copper/silver efflux system
D CHU_0942 acrA; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_1145 yegM; possible membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2657 cation or acridine efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2808 membrane fusion protein; possible cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2514 acrB; cation efflux system protein/acriflavin resistance protein B family K18990 vexE; membrane fusion protein, multidrug efflux system
D CHU_2885 wzc; possible tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_0846 wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_0880 wzc; protein involved in gliding motility EpsB K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CHU_0554 RagB/SusD domain-containing protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHU_0547 conserved hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CHU_3725 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CHU_3726 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CHU_3242 ccmF; cytochrome c-type biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D CHU_3612 mgtC; MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:chu02044]
D CHU_2659 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D CHU_3196 gspE; type II general secretion pathway (GSP) E protein K02652 pilB; type IV pilus assembly protein PilB
D CHU_3199 gspF; type II general secretion pathway (GSP) F protein K02653 pilC; type IV pilus assembly protein PilC
D CHU_3195 gspD; type II general secretion pathway (GSP) D protein K02666 pilQ; type IV pilus assembly protein PilQ
D CHU_0496 conserved hypothetical protein; possible DNA uptake-related protein K02237 comEA; competence protein ComEA
D CHU_2215 dcdA; cytidine/deoxycytidylate deaminase (dCMP deaminase) K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CHU_2973 competence protein K02238 comEC; competence protein ComEC
D CHU_0660 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CHU_0128 secA; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHU_0113 secDF; protein translocase subunit secD / protein translocase subunit secF K12257 secDF; SecD/SecF fusion protein
D CHU_3174a secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D CHU_1825 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D CHU_3142 secY; protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CHU_2754 ffh; signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHU_0651 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CHU_2443 yajC; protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CHU_2557 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHU_0024 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D CHU_1459 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D CHU_3632 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CHU_1460 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:chu02042]
D CHU_3684 hemolysin-related protein; gliding motility protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CHU_1383 conserved hypothetical protein; possible transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:chu02022]
D CHU_3041 phoR; two-component sensor histidine kinase, phosphate regulation K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHU_3042 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CHU_1986 kdpD; sensor kinase for the kdp operon K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CHU_2881 zraR; response regulator of Zn/Pb responsive two-component regulatory system K02483 K02483; two-component system, OmpR family, response regulator
D CHU_0254 lytT; response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CHU_0334 sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D CHU_0362 zraR; two-component response regulator for zraP K07713 zraR; two-component system, NtrC family, response regulator HydG
D CHU_1987 covS; PAS/PAC sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D CHU_1981 atoC; two-component response regulator, sigma-54 related protein K02481 flgR; two-component system, NtrC family, response regulator
D CHU_2078 cheB; protein-glutamate methylesterase (chemotaxis-specific methylesterase) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHU_1237 chemotaxis response regulator (methyltransferase) K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D CHU_1235 phytochrome-like protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D CHU_1654 chromosome segregation ATPase; intracellular signaling protein K20971 ladS; two-component system, sensor histidine kinase LadS
D CHU_2267 conserved hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS
D CHU_3338 conserved hypothetical protein (predicted membrane-spanning protein) K20971 ladS; two-component system, sensor histidine kinase LadS
D CHU_1899 PAS/PAC sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D CHU_3541 cusS; sensor kinase of copper sensing two-component system K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:chu02035]
D CHU_2079 cheR; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHU_2078 cheB; protein-glutamate methylesterase (chemotaxis-specific methylesterase) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHU_1237 chemotaxis response regulator (methyltransferase) K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D CHU_2629 ompA; outer membrane protein, OmpA family K02557 motB; chemotaxis protein MotB
D CHU_3196 gspE; type II general secretion pathway (GSP) E protein K02652 pilB; type IV pilus assembly protein PilB
D CHU_3199 gspF; type II general secretion pathway (GSP) F protein K02653 pilC; type IV pilus assembly protein PilC
D CHU_3195 gspD; type II general secretion pathway (GSP) D protein K02666 pilQ; type IV pilus assembly protein PilQ
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:chu04812]
D CHU_3308 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CHU_2735 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHU_2736 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CHU_2560 soj; chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D CHU_2561 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:chu04147]
D CHU_0477 htpG; heat shock protein (chaperone Hsp90) K04079 HSP90A; molecular chaperone HtpG
D CHU_1341 alf; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CHU_3133 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHU_2987 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHU_0251 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHU_2229 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CHU_1400 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHU_1613 ppiA; peptidyl-prolyl cis-trans isomerase, cyclophilin-binding protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CHU_2724 ahpC; alkyl hydroperoxide reductase, subunit C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CHU_2255 conserved hypothetical protein K07192 FLOT; flotillin
D CHU_3569 SPFH domain, Band 7 family protein K17080 PHB1; prohibitin 1
D CHU_1828 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHU_3101 dnaK; chaperone protein (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D CHU_0472 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHU_3561 pgl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CHU_0196 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CHU_3175 tufB; translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CHU_1632 ycfF; HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CHU_0673 possible lipoprotein transmembrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CHU_3595 fadD; long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHU_1910 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHU_0610 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHU_0068 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CHU_2005 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CHU_3088 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHU_3080 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHU_2896 fbp; D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CHU_0657 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CHU_1345 glgB; candidate glycogen branching enzyme, glycoside hydrolase family 13 protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CHU_2502 glnA; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1734 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_1735 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHU_0646 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CHU_3388 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CHU_0996 serA; phosphoserine phosphatase and phosphoglycerate dehydrogenase (D-3-phosphoglycerate dehydrogenase) fusion K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHU_1630 ldhA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHU_3309 purH; IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHU_1393 Zn-dependent protease with chaperone function K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CHU_3360 lpdA; dihydrolipoyl dehydrogenanse K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1086 adhD; dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_3463 lpdA; pyridine nucleotide-disulfide-related oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHU_1360 fixB; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CHU_3277 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHU_2250 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CHU_0414 blc; outer membrane lipoprotein (lipocalin) K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:chu02048]
D CHU_2218 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CHU_2936 hsdR; restriction enzyme type I helicase subunit; type I restriction enzyme HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CHU_3349 hsdR; type I restriction-modification system R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CHU_3352 hsdS; type I site-specific deoxyribonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CHU_2939 hsdS; probable type I restriction-modification system K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CHU_3351 hsdS; type I site-specific deoxyribonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CHU_2941 restriction/modification methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CHU_3354 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CHU_0501 restriction endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CHU_0042 possible endonuclease K07448 mrr; restriction system protein
D CHU_3348 mrr; restriction endonuclease K07448 mrr; restriction system protein
D CHU_0745 chpA; probable growth inhibitor, PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CHU_3781 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CHU_0643 conserved hypothetical protein K07334 higB-1; toxin HigB-1
D CHU_0642 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1
D CHU_1010 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1
D CHU_2735 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHU_3308 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CHU_1639 gyrA; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CHU_1614 gyrB; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CHU_3373 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CHU_3485 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:chu04052]
D CHU_3254 acyl-CoA-binding protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
D CHU_2424 nadV; nicotinamide phosphoribosyl transferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:chu04090]
C 01504 Antimicrobial resistance genes [BR:chu01504]
D CHU_0641 acetyltransferase, GNAT family K03395 aac3-I; aminoglycoside 3-N-acetyltransferase I [EC:2.3.1.60]
D CHU_0266 yajR; tetracycline resistance protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CHU_3723 permease of the major facilitator superfamily K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CHU_2556 conserved hypothetical protein with multiple pentapeptide repeats K18555 qnr; fluoroquinolone resistance protein
D CHU_0942 acrA; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_1145 yegM; possible membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2657 cation or acridine efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_2808 membrane fusion protein; possible cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CHU_1146 acrB; acriflavine resistance protein K18138 acrB; multidrug efflux pump
D CHU_2861 outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D CHU_0539 cusC; outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CHU_2659 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:chu03100]
D CHU_tAla01 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHU_tAla02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHU_tArg01 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHU_tArg03 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHU_tArg04 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHU_tArg02 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHU_tAsn01 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CHU_tAsp01 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CHU_tCys01 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CHU_tGln01 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CHU_tGlu01 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CHU_tGlu02 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CHU_tGly02 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHU_tGly01 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHU_tHis01 tRNA-His K14226 tRNA-His; tRNA His
D CHU_tIle01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CHU_tLeu04 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHU_tLeu02 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHU_tLeu01 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHU_tLeu03 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHU_tLys01 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CHU_tLys02 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CHU_tMet02 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHU_tMet03 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHU_tMet01 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHU_tPhe01 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CHU_tPhe02 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CHU_tPro01 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHU_tPro02 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHU_tSer01 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHU_tSer02 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHU_tSer03 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHU_tThr03 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHU_tThr01 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHU_tThr02 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHU_tTrp01 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CHU_tTyr01 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CHU_tPseudo01 pseudogene K14236 tRNA-Tyr; tRNA Tyr
D CHU_tVal01 tRNA-Val K14237 tRNA-Val; tRNA Val
D CHU_r16S01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r16S02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r16S03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHU_r23S01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHU_r23S03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHU_r23S02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHU_r5S01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHU_r5S03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHU_r5S02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CHU_2989 short-chain alcohol dehydrogenase/reductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D CHU_2315 bcd; glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D CHU_1033 qor; NADPH:quinone reductase (quinone oxidoreductase) K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CHU_1649 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CHU_0754 msrB; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CHU_3118 yhjA; possible cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CHU_2275 yhjA; cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CHU_0523 ccpA; cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CHU_1893 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CHU_0565 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CHU_3537 tpx; thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CHU_3466 grx; 1-Cys peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CHU_2252 osmC; osmotically inducible protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CHU_3759 conserved hypothetical protein; possible alkylhydroperoxidase K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D CHU_3760 ahpC; peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D CHU_3010 pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CHU_2096 pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CHU_0340 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CHU_3130 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CHU_0592 alcA; lysine/ornithine N-monooxygenase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D CHU_0011 fatty acid hydroxylase K19703 FA2H; 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase [EC:1.14.18.6]
D CHU_0797 ftnA; ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2]
D CHU_1588 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CHU_0542 ptpA; protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CHU_1515 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CHU_1061 possible arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CHU_2258 yciK; possible oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D CHU_1928 pcm; L-isoaspartyl protein carboxyl methyltransferase (protein-L-isoaspartate(D-aspartate) O-methyltransferase) K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CHU_3085 argF; ornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D CHU_3257 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CHU_2143 ate; arginyl-tRNA:protein arginylyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D CHU_2891 a-glycosyltransferase-related protein, glycosyltransferase family 4 protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CHU_0012 a-glycosyltransferase-related protein, glycosyltransferase family 4 protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CHU_1939 homospermidine synthase (spermidine-specific) K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D CHU_2419 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CHU_3222 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CHU_2147 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CHU_2367 Appr-1-p processing enzyme family protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CHU_1238 CHU large protein; beta-xylosidase/endoglucanase K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D CHU_1073 ybgC; probable thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CHU_2119 possible thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CHU_0001 capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CHU_2342 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CHU_2173 Sec-independent protein translocase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CHU_1190 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CHU_3402 ybfF; probable esterase/lipase K01175 ybfF; esterase [EC:3.1.-.-]
D CHU_2105 xynT; xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D CHU_2042 CHU large protein, candidate xylanase, CBM9 module, Glycoside Hydrolase Family 5 protein K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136]
D CHU_2802 bglC; b-glycosidase, glycoside hydrolase family 16 protein K16559 exoK; endo-1,3-1,4-beta-glycanase ExoK [EC:3.2.1.-]
D CHU_0693 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CHU_2175 GlcNAc deacetylase-related protein, carbohydrate esterase family 4 protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CHU_1776 conserved hypothetical protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D CHU_3374 tdcF; endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CHU_0219 conserved hypothetical protein K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D CHU_1695 possible ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CHU_2136 yieN; MoxR-like ATPase, possible regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CHU_0153 conserved hypothetical protein; possible methanol dehydrogenase regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CHU_0190 moxR; methanol dehydrogenase regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CHU_0570 esterase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D CHU_2316 conserved hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D CHU_0573 probable sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CHU_1348 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D CHU_1499 copA; cation-transporting ATPase; possible copper-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CHU_1415 pacL; cation-transporting ATPase, calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CHU_1510 zntA; cation-transporting ATPase; possible zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CHU_1064 pacS; cation-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D CHU_1437 ykgE; oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CHU_1019 ykgF; possible ferrodoxin K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CHU_0614 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D CHU_0686 conserved hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D CHU_1359 fixA; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CHU_2533 gloA; lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein
D CHU_2661 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CHU_3771 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D CHU_3833 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D CHU_2408 esterase-related protein, carbohydrate esterase family 1 protein K03932 lpqC; polyhydroxybutyrate depolymerase
D CHU_0735 conserved hypothetical protein; possible flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D CHU_0672 conserved hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D CHU_2733 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D CHU_3092 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D CHU_0566 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D CHU_0972 conserved hypothetical protein K26958 brxA_B; bacilliredoxin
D CHU_3186 conserved hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CHU_0079 cspC; cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D CHU_2346 cspB; cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D CHU_2338 S1 RNA-binding domain protein K06959 tex; protein Tex
C 99974 Translation
D CHU_3425 ysh1; metallo-beta-lactamase superfamily protein K07576 K07576; metallo-beta-lactamase family protein
D CHU_3523 exonuclease of the beta-lactamase fold involved in RNA processing K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D CHU_1046 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CHU_1705 tig; peptidyl-prolyl cis-trans isomerase, trigger factor K03545 tig; trigger factor
D CHU_1262 ureF; urease accessory protein K03188 ureF; urease accessory protein
D CHU_1263 ureG; urease accessory protein K03189 ureG; urease accessory protein
D CHU_1264 ureH; urease accessory protein K03190 ureD; urease accessory protein
D CHU_1955 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CHU_0354 ch1I; magnesium chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D CHU_0970 probable proline hydroxylase K07394 K07394; SM-20-related protein
D CHU_3460 proteasome-type protease K07395 K07395; putative proteasome-type protease
D CHU_2600 proteasome-type protease K07395 K07395; putative proteasome-type protease
D CHU_3640 dsbC; protein-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase
D CHU_2638 conserved hypothetical protein K07397 yhfA; putative redox protein
D CHU_3187 conserved hypothetical protein K07397 yhfA; putative redox protein
D CHU_1082 OsmC-like family protein K07397 yhfA; putative redox protein
D CHU_2844 serine protease, ClpP class K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D CHU_1048 probable methylated DNA-protein cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D CHU_1153 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC
D CHU_1494 radC; DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC
D CHU_0465 conserved hypothetical protein K07460 yraN; putative endonuclease
D CHU_0210 conserved hypothetical protein K07461 K07461; putative endonuclease
D CHU_1444 dprA; DNA processing protein K04096 smf; DNA processing protein
D CHU_2405 ycaJ; ATPase, AAA family K07478 ycaJ; putative ATPase
D CHU_3057 transposase K07483 K07483; transposase
D CHU_3283 transposase K07483 K07483; transposase
D CHU_2539 tpn; transposase K07483 K07483; transposase
D CHU_2542 transposase K07483 K07483; transposase
D CHU_2171 tpn; transposase K07483 K07483; transposase
D CHU_2306 tpn; transposase K07483 K07483; transposase
D CHU_2323 tpn; transposase K07483 K07483; transposase
D CHU_3617 transposase K07483 K07483; transposase
D CHU_0379 tpn; transposase K07491 rayT; REP-associated tyrosine transposase
D CHU_3203 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D CHU_0236 tpn; transposase K07491 rayT; REP-associated tyrosine transposase
D CHU_0450 tpn; transposase K07491 rayT; REP-associated tyrosine transposase
D CHU_1441 transposase K07491 rayT; REP-associated tyrosine transposase
D CHU_1351 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D CHU_1352 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D CHU_2353 transposase K07491 rayT; REP-associated tyrosine transposase
D CHU_2239 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D CHU_3368 transposase K07491 rayT; REP-associated tyrosine transposase
D CHU_3056 tpn; transposase, IS3 family K07497 K07497; putative transposase
D CHU_3282 tpn; transposase, IS3 family K07497 K07497; putative transposase
D CHU_2538 tpn; transposase, IS3 family K07497 K07497; putative transposase
D CHU_2543 tpn; transposase, IS3 family K07497 K07497; putative transposase
D CHU_2169 tpn; transposase K07497 K07497; putative transposase
D CHU_2170 tpn; transposase K07497 K07497; putative transposase
D CHU_2305 tpn; transposase, IS3 family K07497 K07497; putative transposase
D CHU_2322 tpn; transposase, IS3 family K07497 K07497; putative transposase
D CHU_3616 tpn; transposase, IS3 family K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CHU_0499 conserved hypothetical protein K07504 K07504; predicted type IV restriction endonuclease
D CHU_2675 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D CHU_1053 phrB; deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific) K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CHU_3581 yeeF; amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CHU_1820 yeeF; amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CHU_0538 acrB; AcrB/AcrD family multidrug resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CHU_2658 yegN; multidrug efflux membrane fusion protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CHU_1599 ydgR; oligopeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CHU_0495 Na+ linked D-alanine glycine permease component K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D CHU_0691 conserved hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D CHU_2949 gcr; site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D CHU_0051 tnpX; site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D CHU_0023 yibP; possible membrane protein; possible peptidase, M23/M37 family K22719 envC; murein hydrolase activator
C 99993 Cell motility
D CHU_2333 conserved hypothetical protein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D CHU_2688 typA; GTP-binding elongation factor K06207 typA; GTP-binding protein
D CHU_1999 CBS-domain-containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D CHU_2971 phoH; phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CHU_2279 phoH-related protein K07175 phoH2; PhoH-like ATPase
D CHU_2278 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CHU_3467 conserved hypothetical protein K06142 hlpA; outer membrane protein
D CHU_3413 ompH; outer membrane protein, ompH family K06142 hlpA; outer membrane protein
D CHU_3414 ompH; outer membrane protein, ompH family K06142 hlpA; outer membrane protein
D CHU_3415 ompH; outer membrane protein, ompH family K06142 hlpA; outer membrane protein
D CHU_1832 outer membrane assembly protein K07289 asmA; AsmA protein
D CHU_2645 ydhJ; possible membrane protein K02005 ABC.CD.TX; HlyD family secretion protein
D CHU_2582 creD; inner membrane protein K06143 creD; inner membrane protein
D CHU_3243 conserved hypothetical protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
C 99994 Others
D CHU_3822 phoU; phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D CHU_2587 conserved hypothetical protein, apaG-like protein K06195 apaG; ApaG protein
D CHU_0665 heme transport/degradation factor K07225 hmuS; putative hemin transport protein
D CHU_0666 imelysin, Metallo peptidase, MEROPS family M75 K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CHU_3405 conserved hypothetical protein K03558 cvpA; membrane protein required for colicin V production
D CHU_0036 coiA; competence protein; transcription factor K06198 coiA; competence protein CoiA
D CHU_3785 metG; methionine--tRNA ligase (methionine tRNA synthetase) K06878 K06878; tRNA-binding protein
D CHU_3575 hemoglobin-like protein K06886 glbN; hemoglobin
D CHU_0704 yjjG; probable haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D CHU_0978 sufB; Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CHU_0976 sufD; Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CHU_3584 hypothetical protein K07038 K07038; inner membrane protein
D CHU_1074 conserved hypothetical protein K07058 K07058; membrane protein
D CHU_3548 rbn; probable ribonuclease K07058 K07058; membrane protein
D CHU_0974 Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D CHU_2691 conserved hypothetical protein K07146 K07146; UPF0176 protein
D CHU_2330 conserved hypothetical protein K04750 phnB; PhnB protein
D CHU_3318 possible transposase K04750 phnB; PhnB protein
D CHU_3528 lemA; LemA-like protein K03744 lemA; LemA protein
D CHU_3704 lemA; LemA protein K03744 lemA; LemA protein
D CHU_0005 dedA; integral membrane protein; possible DedA family protein K03975 dedA; membrane-associated protein
D CHU_1368 dedA; possible integral membrane protein K03975 dedA; membrane-associated protein
D CHU_2161 conserved hypothetical protein K00389 yidH; putative membrane protein
D CHU_2284 membrane protein K08972 K08972; putative membrane protein
D CHU_2199 conserved hypothetical protein K08976 K08976; putative membrane protein
D CHU_2566 conserved hypothetical protein K08984 yjdF; putative membrane protein
D CHU_3547 outer membrane protein K08995 K08995; putative membrane protein
D CHU_3550 outer membrane protein K08995 K08995; putative membrane protein
D CHU_2091 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D CHU_1339 phnA; alkylphosphonate uptake protein K06193 phnA; protein PhnA
D CHU_1294 conserved hypothetical protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D CHU_3702 conserved hypothetical protein K06872 K06872; uncharacterized protein
D CHU_3451 conserved hypothetical protein, with fibronectin domain K06882 K06882; uncharacterized protein
D CHU_1039 phosphohydrolase, HC superfamily K06885 K06885; uncharacterized protein
D CHU_2595 conserved hypothetical protein; thioredoxin domain K06888 K06888; uncharacterized protein
D CHU_2821 conserved hypothetical protein K06888 K06888; uncharacterized protein
D CHU_2450 hydrolase with alpha/beta fold K06889 K06889; uncharacterized protein
D CHU_1412 conserved hypothetical protein K06929 K06929; uncharacterized protein
D CHU_1066 conserved hypothetical protein with DNA-binding domain K06934 K06934; uncharacterized protein
D CHU_3526 ICC-like phosphoesterase K06953 K06953; uncharacterized protein
D CHU_3831 conserved hypothetical protein K06973 K06973; uncharacterized protein
D CHU_1921 lactoylglutathione lyase-related protein K06996 K06996; uncharacterized protein
D CHU_3675 membrane protein K07003 K07003; uncharacterized protein
D CHU_2108 conserved hypothetical protein; possible exporter K07003 K07003; uncharacterized protein
D CHU_1863 conserved hypothetical protein K07019 K07019; uncharacterized protein
D CHU_2266 conserved hypothetical protein K07028 K07028; uncharacterized protein
D CHU_1420 conserved hypothetical protein K07032 K07032; uncharacterized protein
D CHU_2327 conserved hypothetical protein; possible lactoylglutathione lyase K07032 K07032; uncharacterized protein
D CHU_1761 metalloprotease K07054 K07054; uncharacterized protein
D CHU_0156 possible sugar nucleotide epimerase K07071 K07071; uncharacterized protein
D CHU_2730 permease K07086 K07086; uncharacterized protein
D CHU_0200 ABC transporter, permease component K07090 K07090; uncharacterized protein
D CHU_0807 conserved hypothetical protein K07090 K07090; uncharacterized protein
D CHU_0567 possible transmembrane protein K07090 K07090; uncharacterized protein
D CHU_1325 conserved hypothetical protein (possible transporter) K07090 K07090; uncharacterized protein
D CHU_3386 phosphatase K07093 K07093; uncharacterized protein
D CHU_2672 conserved hypothetical protein K07095 K07095; uncharacterized protein
D CHU_0828 phosphohydrolase, MutT family K07098 K07098; uncharacterized protein
D CHU_0405 conserved hypothetical protein K07098 K07098; uncharacterized protein
D CHU_1028 conserved hypothetical protein K07112 K07112; uncharacterized protein
D CHU_1029 transporter component K07112 K07112; uncharacterized protein
D CHU_1535 conserved hypothetical protein K07117 K07117; uncharacterized protein
D CHU_2656 conserved hypothetical protein, with SET domain K07117 K07117; uncharacterized protein
D CHU_3621 ydfG; short-chain dehydrogenase K07124 K07124; uncharacterized protein
D CHU_2063 ucpA; short-chain dehydrogenase K07124 K07124; uncharacterized protein
D CHU_2064 probable oxidoreductase (probable short-chain dehydrogenase) K07124 K07124; uncharacterized protein
D CHU_1911 conserved hypothetical protein with multiple MORN variant repeat domains K07126 K07126; uncharacterized protein
D CHU_1411 probable NAD(FAD)-dependent dehydrogenase K07137 K07137; uncharacterized protein
D CHU_1806 conserved hypothetical protein K07164 K07164; uncharacterized protein
D CHU_2420 conserved hypothetical protein K08998 K08998; uncharacterized protein
D CHU_1361 conserved hypothetical protein K08999 K08999; uncharacterized protein
D CHU_2341 conserved hypothetical protein K08999 K08999; uncharacterized protein
D CHU_2835 conserved hypothetical protein K09003 K09003; uncharacterized protein
D CHU_1583 conserved hypothetical protein K09004 K09004; uncharacterized protein
D CHU_3404 conserved hypothetical protein K09117 K09117; uncharacterized protein
D CHU_1152 conserved hypothetical protein K09164 K09164; uncharacterized protein
D CHU_0378 conserved hypothetical protein K09166 K09166; uncharacterized protein
D CHU_1143 conserved hypothetical protein K09792 K09792; uncharacterized protein
D CHU_0966 hypothetical protein K09807 K09807; uncharacterized protein
D CHU_3582 conserved hypothetical protein K09807 K09807; uncharacterized protein
D CHU_1813 conserved hypothetical protein K00243 K00243; uncharacterized protein
D CHU_2334 conserved hypothetical protein K09859 K09859; uncharacterized protein
D CHU_0152 conserved hypothetical protein K09922 K09922; uncharacterized protein
D CHU_3093 conserved hypothetical protein K09929 K09929; uncharacterized protein
D CHU_3094 conserved hypothetical protein K09930 K09930; uncharacterized protein
D CHU_2608 conserved hypothetical protein K09946 K09946; uncharacterized protein
D CHU_2567 conserved hypothetical protein K09954 K09954; uncharacterized protein
D CHU_2340 conserved hypothetical protein K09973 K09973; uncharacterized protein
D CHU_0668 conserved hypothetical protein K07338 K07338; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024