+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Citrus x clementina (clementine)
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E CICLE_v10008689mg hypothetical protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E CICLE_v10031936mg hypothetical protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E CICLE_v10011182mg hypothetical protein K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E CICLE_v10008533mg hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
D Cap binding complex
E CICLE_v100142372m hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1
E CICLE_v10016365mg hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E CICLE_v10005929mg hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E CICLE_v10009459mg hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E CICLE_v10030915mg hypothetical protein K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E CICLE_v10030917mg hypothetical protein K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E CICLE_v10011737mg hypothetical protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E CICLE_v10014158mg hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E CICLE_v10010952mg hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E CICLE_v10004147mg hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E CICLE_v10004414mg hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E CICLE_v10000468mg hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E CICLE_v10000467mg hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E CICLE_v10015184mg hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E CICLE_v10014454mg hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E CICLE_v10004445mg hypothetical protein K15542 PFS2; polyadenylation factor subunit 2
E CICLE_v10003963mg hypothetical protein K14962 WDR82; COMPASS component SWD2
E CICLE_v10015851mg hypothetical protein K14962 WDR82; COMPASS component SWD2
E CICLE_v10001790mg hypothetical protein K14962 WDR82; COMPASS component SWD2
E CICLE_v10021295mg hypothetical protein K14962 WDR82; COMPASS component SWD2
E CICLE_v10005216mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CICLE_v10001659mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CICLE_v10028917mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CICLE_v10013329mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CICLE_v10021192mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CICLE_v10023735mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CICLE_v10032138mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CICLE_v10005966mg hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E CICLE_v10023968mg hypothetical protein K14406 CSTF1; cleavage stimulation factor subunit 1
E CICLE_v10000749mg hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2
E CICLE_v10011123mg hypothetical protein K14408 CSTF3; cleavage stimulation factor subunit 3
E CICLE_v10000105mg hypothetical protein K06100 SYMPK; symplekin
E CICLE_v10010921mg hypothetical protein K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E CICLE_v10018122mg hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E CICLE_v10002830mg hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
E CICLE_v10027494mg hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
E CICLE_v10010045mg hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
E CICLE_v10010046mg hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
E CICLE_v10013235mg hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
E CICLE_v10004414mg hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E CICLE_v10000468mg hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E CICLE_v10000467mg hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E CICLE_v10000749mg hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2
E CICLE_v10000105mg hypothetical protein K06100 SYMPK; symplekin
E CICLE_v10010921mg hypothetical protein K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E CICLE_v10017231mg hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E CICLE_v10000121mg hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E CICLE_v10019070mg hypothetical protein K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E CICLE_v10004180mg hypothetical protein K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E CICLE_v10028267mg hypothetical protein K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E CICLE_v10020974mg hypothetical protein K22824 WTAP; pre-mRNA-splicing regulator WTAP
E CICLE_v10004179mg hypothetical protein K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E CICLE_v10011563mg hypothetical protein K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E CICLE_v10011139mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E CICLE_v10004938mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E CICLE_v10025039mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E CICLE_v10017803mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E CICLE_v10007557mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E CICLE_v10007847mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E CICLE_v10019112mg hypothetical protein K10683 BARD1; BRCA1-associated RING domain protein 1
E CICLE_v10014038mg hypothetical protein K10683 BARD1; BRCA1-associated RING domain protein 1
E CICLE_v10014173mg hypothetical protein K13192 RBM26; RNA-binding protein 26
E CICLE_v10001432mg hypothetical protein K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E CICLE_v10019581mg hypothetical protein K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E CICLE_v10025381mg hypothetical protein K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
C Other processing factors
D CICLE_v10005088mg hypothetical protein K13102 KIN; DNA/RNA-binding protein KIN17
D CICLE_v10025928mg hypothetical protein K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D CICLE_v10014331mg hypothetical protein K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E CICLE_v10016808mg hypothetical protein K12876 RBM8A; RNA-binding protein 8A
E CICLE_v10022690mg hypothetical protein K12877 MAGOH; protein mago nashi
E CICLE_v10032532mg hypothetical protein K12881 THOC4; THO complex subunit 4
E CICLE_v10012530mg hypothetical protein K12881 THOC4; THO complex subunit 4
E CICLE_v10029160mg hypothetical protein K12881 THOC4; THO complex subunit 4
E CICLE_v10012354mg hypothetical protein K12881 THOC4; THO complex subunit 4
E CICLE_v10008383mg hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E CICLE_v10031706mg hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E CICLE_v10022649mg hypothetical protein K14324 SAP18; histone deacetylase complex subunit SAP18
E CICLE_v10001338mg hypothetical protein K13114 PNN; pinin
E CICLE_v10025009mg hypothetical protein K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E CICLE_v10020284mg hypothetical protein K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E CICLE_v10030390mg hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E CICLE_v10000631mg hypothetical protein K12878 THOC1; THO complex subunit 1
E CICLE_v10014076mg hypothetical protein K12879 THOC2; THO complex subunit 2
E CICLE_v10008971mg hypothetical protein K12880 THOC3; THO complex subunit 3
E CICLE_v10032532mg hypothetical protein K12881 THOC4; THO complex subunit 4
E CICLE_v10012530mg hypothetical protein K12881 THOC4; THO complex subunit 4
E CICLE_v10029160mg hypothetical protein K12881 THOC4; THO complex subunit 4
E CICLE_v10012354mg hypothetical protein K12881 THOC4; THO complex subunit 4
E CICLE_v10000290mg hypothetical protein K13174 THOC5; THO complex subunit 5
E CICLE_v10021949mg hypothetical protein K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E CICLE_v10023184mg hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E CICLE_v10017382mg hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E CICLE_v10033394mg hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor
E CICLE_v10017250mg hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor
E CICLE_v10004135mg hypothetical protein K23719 SAC3; nuclear mRNA export protein SAC3
E CICLE_v10002050mg hypothetical protein K23719 SAC3; nuclear mRNA export protein SAC3
D Nuclear pore complex
E CICLE_v10006542mg hypothetical protein K09291 TPR; nucleoprotein TPR
E CICLE_v10025978mg hypothetical protein K14298 RAE1; mRNA export factor
E CICLE_v10027455mg hypothetical protein K14298 RAE1; mRNA export factor
E CICLE_v10016079mg hypothetical protein K14004 SEC13; protein transport protein SEC13
E CICLE_v10026168mg hypothetical protein K14004 SEC13; protein transport protein SEC13
E CICLE_v10007610mg hypothetical protein K14304 NUP85; nuclear pore complex protein Nup85
E CICLE_v10008825mg hypothetical protein K14305 NUP43; nuclear pore complex protein Nup43
E CICLE_v10020090mg hypothetical protein K14295 NUP50; nuclear pore complex protein Nup50
E CICLE_v10031923mg hypothetical protein K14308 NUP54; nuclear pore complex protein Nup54
E CICLE_v10019079mg hypothetical protein K14306 NUP62; nuclear pore complex protein Nup62
E CICLE_v10030725mg hypothetical protein K14318 NUP88; nuclear pore complex protein Nup88
E CICLE_v10004294mg hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93
E CICLE_v10000333mg hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E CICLE_v10024784mg hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E CICLE_v10018664mg hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E CICLE_v10027090mg hypothetical protein K14301 NUP107; nuclear pore complex protein Nup107
E CICLE_v10014054mg hypothetical protein K14300 NUP133; nuclear pore complex protein Nup133
E CICLE_v10027667mg hypothetical protein K14311 NUP188; nuclear pore complex protein Nup188
E CICLE_v10014036mg hypothetical protein K14312 NUP155; nuclear pore complex protein Nup155
E CICLE_v10000026mg hypothetical protein K14303 NUP160; nuclear pore complex protein Nup160
E CICLE_v10026016mg hypothetical protein K14313 NUP35; nuclear pore complex protein Nup53
E CICLE_v100072441m hypothetical protein K14310 NUP205; nuclear pore complex protein Nup205
E CICLE_v10018026mg hypothetical protein K14314 NUP210; nuclear pore complex protein Nup210
E CICLE_v10014017mg hypothetical protein K14317 NUP214; nuclear pore complex protein Nup214
E CICLE_v10025487mg hypothetical protein K14307 NUPL1; nucleoporin p58/p45
E CICLE_v10008517mg hypothetical protein K14321 NUPL2; nucleoporin-like protein 2
E CICLE_v100237131m hypothetical protein K14315 NDC1; nucleoporin NDC1
E CICLE_v10021146mg hypothetical protein K14299 SEH1; nucleoporin SEH1
E CICLE_v10011725mg hypothetical protein K14320 AAAS; aladin
E CICLE_v10030923mg hypothetical protein K18723 GLE1; nucleoporin GLE1
D Ran-mediated transport factors
E CICLE_v10009427mg hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran
E CICLE_v10009426mg hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran
E CICLE_v10020441mg hypothetical protein K18726 FAF2; FAS-associated factor 2
E CICLE_v10020047mg hypothetical protein K18726 FAF2; FAS-associated factor 2
E CICLE_v10011046mg hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase
E CICLE_v10018887mg hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase
E CICLE_v10027840mg hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase
E CICLE_v10013552mg hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase
E CICLE_v10016518mg hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E CICLE_v10029831mg hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E CICLE_v100187642m hypothetical protein K14290 XPO1; exportin-1
E CICLE_v100001492m hypothetical protein K18460 XPO7; exportin-7
E CICLE_v10004648mg hypothetical protein K14319 RANGAP1; Ran GTPase-activating protein 1
E CICLE_v10019619mg hypothetical protein K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E CICLE_v10005943mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E CICLE_v10022151mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E CICLE_v10016586mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E CICLE_v10008460mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E CICLE_v10008468mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E CICLE_v10025724mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E CICLE_v10007494mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E CICLE_v10024023mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E CICLE_v10018460mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E CICLE_v10023801mg hypothetical protein K05749 CYFIP; cytoplasmic FMR1 interacting protein
E CICLE_v100114061m hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E CICLE_v10011322mg hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E CICLE_v10014024mg hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E CICLE_v10030493mg hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E CICLE_v10032498mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10003530mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10030378mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10007158mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10027999mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10011287mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10025109mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10000537mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10027687mg hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E CICLE_v10002634mg hypothetical protein K07575 MCTS; malignant T-cell-amplified sequence
E CICLE_v10009478mg hypothetical protein K24272 DENR; density-regulated protein
E CICLE_v10009610mg hypothetical protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E CICLE_v10002345mg hypothetical protein K14294 WIBG; partner of Y14 and mago
E CICLE_v10018414mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10009293mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10019850mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10011637mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10008394mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10025608mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10025943mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E CICLE_v10008158mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E CICLE_v10004941mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E CICLE_v10015098mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E CICLE_v10015084mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E CICLE_v10020365mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E CICLE_v10027463mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E CICLE_v10007529mg hypothetical protein K14416 HBS1; elongation factor 1 alpha-like protein
E CICLE_v10023555mg hypothetical protein K06965 PELO; protein pelota
E CICLE_v100136752m hypothetical protein K06965 PELO; protein pelota
E CICLE_v100264481m hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2
E CICLE_v100293173m hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2
E CICLE_v10032621mg hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2
E CICLE_v100264482m hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2
E CICLE_v10014975mg hypothetical protein K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E CICLE_v10014187mg hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
E CICLE_v10012743mg hypothetical protein K18732 SARNP; SAP domain-containing ribonucleoprotein
E CICLE_v10016090mg hypothetical protein K21772 PURA; transcriptional activator protein Pur-alpha
E CICLE_v10030610mg hypothetical protein K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E CICLE_v10028480mg hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
E CICLE_v10015328mg hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
E CICLE_v10015281mg hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
E CICLE_v10008034mg hypothetical protein K03267 ERF3; peptide chain release factor subunit 3
E CICLE_v10018539mg hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2
E CICLE_v10000901mg hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3
E CICLE_v10019695mg hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E CICLE_v10012259mg hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E CICLE_v100212822m hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E CICLE_v10032215mg hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E CICLE_v10015516mg hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E CICLE_v100194172m hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E CICLE_v10031047mg hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E CICLE_v10019821mg hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E CICLE_v100253982m hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E CICLE_v10008030mg hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E CICLE_v10007050mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E CICLE_v10005060mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E CICLE_v10024489mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E CICLE_v10019630mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E CICLE_v10011941mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E CICLE_v10014898mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E CICLE_v10007952mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E CICLE_v10008015mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E CICLE_v10014856mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E CICLE_v10033481mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E CICLE_v10031228mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E CICLE_v10031285mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E CICLE_v10027657mg hypothetical protein K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E CICLE_v10014151mg hypothetical protein K14409 SMG7; protein SMG7
E CICLE_v10027698mg hypothetical protein K18734 SMG8; protein SMG8
E CICLE_v10020455mg hypothetical protein K18735 SMG9; protein SMG9
E CICLE_v10014024mg hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E CICLE_v10030493mg hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
C Factors involved in mRNA localization
D Cargo complex
E CICLE_v100045852m hypothetical protein K14844 PUF6; pumilio homology domain family member 6
E CICLE_v10024696mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10010780mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10007271mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10018480mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10024066mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10007325mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10018485mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10004144mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10008867mg hypothetical protein K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
D Trans-acting binding proteins
E CICLE_v10018931mg hypothetical protein K13210 FUBP; far upstream element-binding protein
E CICLE_v10007663mg hypothetical protein K13210 FUBP; far upstream element-binding protein
E CICLE_v10028446mg hypothetical protein K03231 EEF1A; elongation factor 1-alpha
E CICLE_v10028445mg hypothetical protein K03231 EEF1A; elongation factor 1-alpha
E CICLE_v10028443mg hypothetical protein K03231 EEF1A; elongation factor 1-alpha
E CICLE_v10033471mg hypothetical protein K03231 EEF1A; elongation factor 1-alpha
E CICLE_v10020303mg hypothetical protein K03233 EEF1G; elongation factor 1-gamma
E CICLE_v10003566mg hypothetical protein K03233 EEF1G; elongation factor 1-gamma
E CICLE_v10030836mg hypothetical protein K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
D Other mRNA localization factors
E CICLE_v10023801mg hypothetical protein K05749 CYFIP; cytoplasmic FMR1 interacting protein
E CICLE_v10019880mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10011418mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10031267mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10025195mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10000476mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10027864mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10028209mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10021057mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10014608mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10011187mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10025599mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E CICLE_v10008200mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E CICLE_v10027763mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10027752mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10027755mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10027750mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10011166mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10030593mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10014153mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10018625mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10014201mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10004245mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10027760mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10014186mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10014144mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10003971mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E CICLE_v10005943mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E CICLE_v10022151mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E CICLE_v10016586mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E CICLE_v100114061m hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E CICLE_v10011322mg hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E CICLE_v10019858mg hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E CICLE_v10011356mg hypothetical protein K18749 LSM14; protein LSM14
E CICLE_v10011410mg hypothetical protein K18749 LSM14; protein LSM14
E CICLE_v10004283mg hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E CICLE_v10000353mg hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E CICLE_v10030791mg hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E CICLE_v10033534mg hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E CICLE_v10030734mg hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E CICLE_v10031085mg hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E CICLE_v10027778mg hypothetical protein K18752 TNPO1; transportin-1
E CICLE_v10027657mg hypothetical protein K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E CICLE_v10014151mg hypothetical protein K14409 SMG7; protein SMG7
E CICLE_v10013897mg hypothetical protein K18753 ZFP36L; butyrate response factor
E CICLE_v10015908mg hypothetical protein K18753 ZFP36L; butyrate response factor
E CICLE_v10018414mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10009293mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10019850mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10011637mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10008394mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10025608mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E CICLE_v10000767mg hypothetical protein K18757 LARP1; la-related protein 1
E CICLE_v10025634mg hypothetical protein K18757 LARP1; la-related protein 1
E CICLE_v10014180mg hypothetical protein K18757 LARP1; la-related protein 1
D P-body specific factors
E CICLE_v10032124mg hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E CICLE_v10028751mg hypothetical protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E CICLE_v10030291mg hypothetical protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E CICLE_v10012009mg hypothetical protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E CICLE_v10009897mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E CICLE_v10026767mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E CICLE_v10023059mg hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E CICLE_v10003306mg hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E CICLE_v10002950mg hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E CICLE_v10022685mg hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E CICLE_v10002769mg hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E CICLE_v10022785mg hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E CICLE_v10023071mg hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E CICLE_v10033061mg hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E CICLE_v10023032mg hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E CICLE_v10024696mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10010780mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10007271mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10018480mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10024066mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10007325mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10018485mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10004144mg hypothetical protein K10357 MYO5; myosin V
E CICLE_v10020128mg hypothetical protein K07374 TUBA; tubulin alpha
E CICLE_v10006669mg hypothetical protein K07374 TUBA; tubulin alpha
E CICLE_v10028426mg hypothetical protein K07374 TUBA; tubulin alpha
E CICLE_v10015224mg hypothetical protein K07374 TUBA; tubulin alpha
E CICLE_v10025588mg hypothetical protein K07374 TUBA; tubulin alpha
E CICLE_v10011709mg hypothetical protein K07374 TUBA; tubulin alpha
E CICLE_v10018430mg hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E CICLE_v10027964mg hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E CICLE_v10018788mg hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E CICLE_v10027731mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E CICLE_v10010976mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E CICLE_v10001424mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E CICLE_v10011329mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E CICLE_v10009159mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10028965mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10016106mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10026260mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10008276mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10013586mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10013857mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10012581mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10000093mg hypothetical protein K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E CICLE_v10013436mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E CICLE_v10018922mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E CICLE_v10014046mg hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4
E CICLE_v10007261mg hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4
E CICLE_v10018539mg hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2
E CICLE_v10000901mg hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3
E CICLE_v10019695mg hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3
E CICLE_v10029380mg hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E CICLE_v10000713mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E CICLE_v10030951mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E CICLE_v10010381mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E CICLE_v10019348mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E CICLE_v10027973mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E CICLE_v10004597mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E CICLE_v10004458mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E CICLE_v10025673mg hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
E CICLE_v10008437mg hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
E CICLE_v10032498mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10003530mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10030378mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10007158mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10027999mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10011287mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10025109mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10000537mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E CICLE_v10020038mg hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E CICLE_v10011679mg hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E CICLE_v10031630mg hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E CICLE_v10020020mg hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E CICLE_v10019752mg hypothetical protein K15026 EIF2A; translation initiation factor 2A
E CICLE_v100076092m hypothetical protein K03253 EIF3B; translation initiation factor 3 subunit B
E CICLE_v10008460mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E CICLE_v10008468mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E CICLE_v10025724mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E CICLE_v10031706mg hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E CICLE_v10007494mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E CICLE_v10024023mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E CICLE_v10018460mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E CICLE_v10008909mg hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E CICLE_v10028751mg hypothetical protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E CICLE_v10030291mg hypothetical protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E CICLE_v10012009mg hypothetical protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E CICLE_v10032124mg hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E CICLE_v10019858mg hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E CICLE_v10014046mg hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4
E CICLE_v10007261mg hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4
E CICLE_v10013436mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E CICLE_v10018922mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E CICLE_v10009897mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E CICLE_v10026767mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E CICLE_v10023059mg hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E CICLE_v10003306mg hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E CICLE_v10002950mg hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E CICLE_v10022685mg hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E CICLE_v10002769mg hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E CICLE_v10022785mg hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E CICLE_v10023071mg hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E CICLE_v10033061mg hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E CICLE_v10023032mg hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E CICLE_v10000087mg hypothetical protein K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E CICLE_v10000168mg hypothetical protein K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-]
D Other 5'-3' decay factors
C 3'-5' decay
D Core exosome factors
E CICLE_v10022342mg hypothetical protein K07573 CSL4; exosome complex component CSL4
E CICLE_v10021133mg hypothetical protein K03679 RRP4; exosome complex component RRP4
E CICLE_v10021986mg hypothetical protein K03681 RRP40; exosome complex component RRP40
E CICLE_v10021944mg hypothetical protein K11600 RRP41; exosome complex component RRP41
E CICLE_v10009310mg hypothetical protein K12590 RRP46; exosome complex component RRP46
E CICLE_v10029091mg hypothetical protein K12587 MTR3; exosome complex component MTR3
E CICLE_v10016158mg hypothetical protein K12589 RRP42; exosome complex component RRP42
E CICLE_v10005512mg hypothetical protein K12586 RRP43; exosome complex component RRP43
E CICLE_v10015158mg hypothetical protein K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E CICLE_v10024818mg hypothetical protein K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E CICLE_v10018753mg hypothetical protein K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E CICLE_v10009140mg hypothetical protein K12592 C1D; exosome complex protein LRP1
E CICLE_v10029345mg hypothetical protein K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E CICLE_v10008024mg hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E CICLE_v10008854mg hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E CICLE_v10027747mg hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E CICLE_v10018695mg hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E CICLE_v10027687mg hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E CICLE_v10003766mg hypothetical protein K12600 SKI3; superkiller protein 3
E CICLE_v10010808mg hypothetical protein K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E CICLE_v10001424mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E CICLE_v10011329mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E CICLE_v10018430mg hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E CICLE_v10027964mg hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E CICLE_v10018788mg hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E CICLE_v10027731mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E CICLE_v10010976mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E CICLE_v10009159mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10028965mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10016106mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10026260mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10008276mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10013586mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10013857mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10012581mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CICLE_v10017581mg hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9
E CICLE_v10010530mg hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9
E CICLE_v10007427mg hypothetical protein K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E CICLE_v10012095mg hypothetical protein K12608 CAF16; CCR4-NOT complex subunit CAF16
E CICLE_v10021439mg hypothetical protein K12608 CAF16; CCR4-NOT complex subunit CAF16
D Pan complex
D Other 3'-5' decay factors
E CICLE_v10014999mg hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E CICLE_v10015926mg hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E CICLE_v10007611mg hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E CICLE_v10007274mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E CICLE_v10024744mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E CICLE_v10010961mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E CICLE_v10014079mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E CICLE_v10033885mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E CICLE_v10001735mg hypothetical protein K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E CICLE_v10027527mg hypothetical protein K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E CICLE_v10027488mg hypothetical protein K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E CICLE_v10027284mg hypothetical protein K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E CICLE_v10027071mg hypothetical protein K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E CICLE_v10018592mg hypothetical protein K26109 NRDE2; nuclear exosome regulator NRDE2
E CICLE_v10014033mg hypothetical protein K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E CICLE_v10016367mg hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E CICLE_v10004965mg hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E CICLE_v10028351mg hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E CICLE_v10020008mg hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E CICLE_v10011726mg hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E CICLE_v10014159mg hypothetical protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E CICLE_v10019242mg hypothetical protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E CICLE_v10004702mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E CICLE_v10015031mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E CICLE_v10007886mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E CICLE_v10025337mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E CICLE_v10025255mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E CICLE_v10008181mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E CICLE_v10015130mg hypothetical protein K04043 dnaK; molecular chaperone DnaK
E CICLE_v10000502mg hypothetical protein K04043 dnaK; molecular chaperone DnaK
E CICLE_v10027943mg hypothetical protein K04043 dnaK; molecular chaperone DnaK
E CICLE_v10014640mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E CICLE_v10025257mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E CICLE_v10031053mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E CICLE_v10021133mg hypothetical protein K03679 RRP4; exosome complex component RRP4
E CICLE_v10022342mg hypothetical protein K07573 CSL4; exosome complex component CSL4
D Cofactors
E CICLE_v10021944mg hypothetical protein K11600 RRP41; exosome complex component RRP41
E CICLE_v10016158mg hypothetical protein K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024