+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Citrus x clementina (clementine)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        CICLE_v10024686mg hypothetical protein	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        CICLE_v10027701mg hypothetical protein	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        CICLE_v10028849mg hypothetical protein	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        CICLE_v10033103mg hypothetical protein	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        CICLE_v10026735mg hypothetical protein	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        CICLE_v10016499mg hypothetical protein	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        CICLE_v10029380mg hypothetical protein	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        CICLE_v10006256mg hypothetical protein	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        CICLE_v10009504mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10005821mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10021999mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10006171mg hypothetical protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        CICLE_v10022723mg hypothetical protein	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        CICLE_v10017429mg hypothetical protein	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        CICLE_v10033492mg hypothetical protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        CICLE_v10018489mg hypothetical protein	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        CICLE_v10004129mg hypothetical protein	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        CICLE_v10018562mg hypothetical protein	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        CICLE_v10006012mg hypothetical protein	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        CICLE_v10006285mg hypothetical protein	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        CICLE_v10028561mg hypothetical protein	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        CICLE_v10002917mg hypothetical protein	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        CICLE_v10025402mg hypothetical protein	K03124 TFIIB; transcription initiation factor TFIIB 
E        CICLE_v10021272mg hypothetical protein	K03124 TFIIB; transcription initiation factor TFIIB 
E        CICLE_v10005479mg hypothetical protein	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        CICLE_v10033950mg hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CICLE_v10022324mg hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CICLE_v10004140mg hypothetical protein	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        CICLE_v100041253m hypothetical protein	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        CICLE_v10018514mg hypothetical protein	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        CICLE_v10000177mg hypothetical protein	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        CICLE_v100076131m hypothetical protein	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        CICLE_v10014827mg hypothetical protein	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        CICLE_v10007970mg hypothetical protein	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        CICLE_v10016632mg hypothetical protein	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        CICLE_v10012002mg hypothetical protein	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        CICLE_v10016196mg hypothetical protein	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        CICLE_v10012038mg hypothetical protein	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        CICLE_v10032895mg hypothetical protein	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        CICLE_v10026608mg hypothetical protein	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        CICLE_v10009813mg hypothetical protein	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        CICLE_v10016661mg hypothetical protein	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        CICLE_v10011440mg hypothetical protein	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        CICLE_v10025234mg hypothetical protein	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        CICLE_v10022845mg hypothetical protein	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        CICLE_v10002837mg hypothetical protein	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        CICLE_v10019993mg hypothetical protein	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        CICLE_v10021533mg hypothetical protein	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        CICLE_v10014841mg hypothetical protein	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        CICLE_v10032402mg hypothetical protein	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        CICLE_v10002202mg hypothetical protein	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        CICLE_v10007802mg hypothetical protein	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        CICLE_v10011800mg hypothetical protein	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        CICLE_v10005033mg hypothetical protein	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        CICLE_v100020021m hypothetical protein	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        CICLE_v10009035mg hypothetical protein	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        CICLE_v100190881m hypothetical protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        CICLE_v10018975mg hypothetical protein	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        CICLE_v10024015mg hypothetical protein	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        CICLE_v10008533mg hypothetical protein	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        CICLE_v10009604mg hypothetical protein	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        CICLE_v10001764mg hypothetical protein	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        CICLE_v10026335mg hypothetical protein	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        CICLE_v10017234mg hypothetical protein	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        CICLE_v10007689mg hypothetical protein	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        CICLE_v100264431m hypothetical protein	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        CICLE_v10012695mg hypothetical protein	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        CICLE_v10022715mg hypothetical protein	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        CICLE_v10033890mg hypothetical protein	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        CICLE_v10022754mg hypothetical protein	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        CICLE_v10012936mg hypothetical protein	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        CICLE_v10022441mg hypothetical protein	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        CICLE_v10017125mg hypothetical protein	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        CICLE_v10032791mg hypothetical protein	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        CICLE_v10000014mg hypothetical protein	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        CICLE_v10019965mg hypothetical protein	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        CICLE_v10021820mg hypothetical protein	K15161 CCNC; cyclin-C 
E        CICLE_v10014014mg hypothetical protein	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        CICLE_v10014030mg hypothetical protein	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        CICLE_v10030710mg hypothetical protein	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        CICLE_v10011749mg hypothetical protein	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        CICLE_v10029521mg hypothetical protein	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        CICLE_v10018517mg hypothetical protein	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        CICLE_v10006738mg hypothetical protein	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        CICLE_v10010920mg hypothetical protein	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        CICLE_v10019527mg hypothetical protein	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        CICLE_v10024677mg hypothetical protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        CICLE_v10014921mg hypothetical protein	K11314 TADA2A; transcriptional adapter 2-alpha 
E        CICLE_v10014755mg hypothetical protein	K11314 TADA2A; transcriptional adapter 2-alpha 
E        CICLE_v10018514mg hypothetical protein	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        CICLE_v10000177mg hypothetical protein	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        CICLE_v100076131m hypothetical protein	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        CICLE_v10014827mg hypothetical protein	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        CICLE_v10007970mg hypothetical protein	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        CICLE_v10016632mg hypothetical protein	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        CICLE_v10032895mg hypothetical protein	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        CICLE_v10026608mg hypothetical protein	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        CICLE_v10009813mg hypothetical protein	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        CICLE_v10011440mg hypothetical protein	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        CICLE_v10025234mg hypothetical protein	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        CICLE_v10029374mg hypothetical protein	K11363 SGF11; SAGA-associated factor 11 
E        CICLE_v10016259mg hypothetical protein	K11364 SGF29; SAGA-associated factor 29 
E        CICLE_v100140191m hypothetical protein	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        CICLE_v10033394mg hypothetical protein	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        CICLE_v10017250mg hypothetical protein	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        CICLE_v10007858mg hypothetical protein	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        CICLE_v10007902mg hypothetical protein	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        CICLE_v10030532mg hypothetical protein	K12830 SF3B3; splicing factor 3B subunit 3 
E        CICLE_v10011020mg hypothetical protein	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        CICLE_v10018438mg hypothetical protein	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        CICLE_v10005749mg hypothetical protein	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        CICLE_v10031125mg hypothetical protein	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        CICLE_v10000405mg hypothetical protein	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        CICLE_v10027804mg hypothetical protein	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        CICLE_v10001069mg hypothetical protein	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        CICLE_v10014820mg hypothetical protein	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        CICLE_v10024401mg hypothetical protein	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
D      SWI/SNF complex
E        CICLE_v10005749mg hypothetical protein	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        CICLE_v10023952mg hypothetical protein	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        CICLE_v10002914mg hypothetical protein	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        CICLE_v10030522mg hypothetical protein	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        CICLE_v10013888mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10003866mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10013883mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10013633mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10013672mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10024181mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10004043mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10013356mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10011998mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10013562mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10013487mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10011982mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10024570mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10024245mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10021335mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10023605mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10004051mg hypothetical protein	K03145 TFIIS; transcription elongation factor S-II 
E        CICLE_v10017231mg hypothetical protein	K15171 SUPT4H1; transcription elongation factor SPT4 
E        CICLE_v10000121mg hypothetical protein	K15172 SUPT5H; transcription elongation factor SPT5 
E        CICLE_v10013566mg hypothetical protein	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        CICLE_v10014158mg hypothetical protein	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        CICLE_v10010952mg hypothetical protein	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        CICLE_v10004147mg hypothetical protein	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        CICLE_v10000468mg hypothetical protein	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        CICLE_v10000467mg hypothetical protein	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        CICLE_v10015184mg hypothetical protein	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        CICLE_v10014454mg hypothetical protein	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        CICLE_v10005216mg hypothetical protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CICLE_v10001659mg hypothetical protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CICLE_v10028917mg hypothetical protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CICLE_v10013329mg hypothetical protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CICLE_v10021192mg hypothetical protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CICLE_v10023735mg hypothetical protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CICLE_v10032138mg hypothetical protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        CICLE_v10000105mg hypothetical protein	K06100 SYMPK; symplekin 
E        CICLE_v10010921mg hypothetical protein	K06100 SYMPK; symplekin 
E        CICLE_v10005966mg hypothetical protein	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        CICLE_v10000087mg hypothetical protein	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        CICLE_v10019303mg hypothetical protein	K14845 RAI1; RAT1-interacting protein 
E        CICLE_v10031118mg hypothetical protein	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        CICLE_v10027075mg hypothetical protein	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        CICLE_v10014885mg hypothetical protein	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        CICLE_v10026785mg hypothetical protein	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        CICLE_v10025066mg hypothetical protein	K15174 PAF1; RNA polymerase II-associated factor 1 
E        CICLE_v10005124mg hypothetical protein	K15175 CDC73; parafibromin 
E        CICLE_v10007295mg hypothetical protein	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        CICLE_v10019267mg hypothetical protein	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        CICLE_v10028000mg hypothetical protein	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        CICLE_v10015960mg hypothetical protein	K15186 EAF; ELL-associated factor 
E        CICLE_v10012163mg hypothetical protein	K15186 EAF; ELL-associated factor 
E        CICLE_v100181362m hypothetical protein	K15188 CCNT; cyclin T 
E        CICLE_v10005160mg hypothetical protein	K15188 CCNT; cyclin T 
E        CICLE_v10004575mg hypothetical protein	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        CICLE_v100181362m hypothetical protein	K15188 CCNT; cyclin T 
E        CICLE_v10005160mg hypothetical protein	K15188 CCNT; cyclin T 
E        CICLE_v10004575mg hypothetical protein	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        CICLE_v100092682m hypothetical protein	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        CICLE_v10015602mg hypothetical protein	K15191 LARP7; La-related protein 7 
E        CICLE_v10028506mg hypothetical protein	K15191 LARP7; La-related protein 7 
E        CICLE_v10019649mg hypothetical protein	K15191 LARP7; La-related protein 7 
E        CICLE_v100181362m hypothetical protein	K15188 CCNT; cyclin T 
E        CICLE_v10005160mg hypothetical protein	K15188 CCNT; cyclin T 
E        CICLE_v10004575mg hypothetical protein	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        CICLE_v10030472mg hypothetical protein	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        CICLE_v10022641mg hypothetical protein	K21751 DR1; down-regulator of transcription 1 
E        CICLE_v10002081mg hypothetical protein	K21752 DRAP1; Dr1-associated corepressor 
E        CICLE_v10025536mg hypothetical protein	K15193 SPTY2D1; protein SPT2 
E        CICLE_v10028923mg hypothetical protein	K15193 SPTY2D1; protein SPT2 
E        CICLE_v10014168mg hypothetical protein	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        CICLE_v10011105mg hypothetical protein	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        CICLE_v10010299mg hypothetical protein	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        CICLE_v10030535mg hypothetical protein	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        CICLE_v10010494mg hypothetical protein	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        CICLE_v10012210mg hypothetical protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        CICLE_v10031856mg hypothetical protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        CICLE_v10016126mg hypothetical protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        CICLE_v10000803mg hypothetical protein	K17498 SPN1; transcription factor SPN1 
E        CICLE_v10027678mg hypothetical protein	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        CICLE_v10011677mg hypothetical protein	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        CICLE_v10006439mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006022mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006530mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006957mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006405mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006500mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10007104mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006803mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006958mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006615mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006503mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006708mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006740mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10006546mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10007015mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10007010mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10022548mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10024318mg hypothetical protein	K12412 MCM1; pheromone receptor transcription factor 
E        CICLE_v10005025mg hypothetical protein	K24104 GPN; GPN-loop GTPase 
E        CICLE_v10032421mg hypothetical protein	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        CICLE_v10027681mg hypothetical protein	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        CICLE_v10000078mg hypothetical protein	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        CICLE_v10008413mg hypothetical protein	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        CICLE_v10029631mg hypothetical protein	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        CICLE_v10004721mg hypothetical protein	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        CICLE_v10012311mg hypothetical protein	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        CICLE_v10005426mg hypothetical protein	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        CICLE_v10025048mg hypothetical protein	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        CICLE_v10026399mg hypothetical protein	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        CICLE_v100094941m hypothetical protein	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        CICLE_v10022257mg hypothetical protein	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        CICLE_v10026494mg hypothetical protein	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        CICLE_v10023915mg hypothetical protein	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        CICLE_v10006087mg hypothetical protein	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        CICLE_v10022957mg hypothetical protein	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        CICLE_v10009504mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10005821mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10021999mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10006171mg hypothetical protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        CICLE_v10022723mg hypothetical protein	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        CICLE_v10017429mg hypothetical protein	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        CICLE_v10033492mg hypothetical protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        CICLE_v10012016mg hypothetical protein	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        CICLE_v10033950mg hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CICLE_v10022324mg hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CICLE_v10031207mg hypothetical protein	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        CICLE_v10019321mg hypothetical protein	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        CICLE_v10027900mg hypothetical protein	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        CICLE_v10024687mg hypothetical protein	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        CICLE_v10011197mg hypothetical protein	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        CICLE_v10026956mg hypothetical protein	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        CICLE_v10019721mg hypothetical protein	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        CICLE_v100272411m hypothetical protein	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        CICLE_v10009838mg hypothetical protein	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        CICLE_v100272411m hypothetical protein	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        CICLE_v10026956mg hypothetical protein	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        CICLE_v10019721mg hypothetical protein	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        CICLE_v10002076mg hypothetical protein	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        CICLE_v10032301mg hypothetical protein	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        CICLE_v10015263mg hypothetical protein	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        CICLE_v100165972m hypothetical protein	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        CICLE_v10004132mg hypothetical protein	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        CICLE_v10024768mg hypothetical protein	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        CICLE_v10008413mg hypothetical protein	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        CICLE_v10029631mg hypothetical protein	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        CICLE_v10025597mg hypothetical protein	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        CICLE_v10003775mg hypothetical protein	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        CICLE_v10009504mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10005821mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10021999mg hypothetical protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        CICLE_v10006171mg hypothetical protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        CICLE_v10022723mg hypothetical protein	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        CICLE_v10017429mg hypothetical protein	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        CICLE_v10033492mg hypothetical protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        CICLE_v10033950mg hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        CICLE_v10022324mg hypothetical protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        CICLE_v10023918mg hypothetical protein	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        CICLE_v10026010mg hypothetical protein	K15223 UAF30; upstream activation factor subunit UAF30 
E        CICLE_v10028659mg hypothetical protein	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        CICLE_v10017231mg hypothetical protein	K15171 SUPT4H1; transcription elongation factor SPT4 
E        CICLE_v10000121mg hypothetical protein	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        CICLE_v10004220mg hypothetical protein	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
E        CICLE_v10031289mg hypothetical protein	K03086 rpoD; RNA polymerase primary sigma factor 
E        CICLE_v10007968mg hypothetical protein	K03093 sigI; RNA polymerase sigma-I factor 
E        CICLE_v10004760mg hypothetical protein	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        CICLE_v10025402mg hypothetical protein	K03124 TFIIB; transcription initiation factor TFIIB 
E        CICLE_v10021272mg hypothetical protein	K03124 TFIIB; transcription initiation factor TFIIB 
E        CICLE_v10005479mg hypothetical protein	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        CICLE_v10019993mg hypothetical protein	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 9, 2024