+D GENES KO
#
KEGG Orthology (KO) - Cellulomonas iranensis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cira00010]
D LFM56_07630 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11605 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11645 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LFM56_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_08245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_07645 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D LFM56_03250 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LFM56_08345 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LFM56_08335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LFM56_08340 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LFM56_15225 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LFM56_13830 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LFM56_08135 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LFM56_07015 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LFM56_07295 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LFM56_07465 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_10485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LFM56_13130 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D LFM56_04045 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_11265 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_17265 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D LFM56_12095 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D LFM56_01910 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LFM56_04890 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D LFM56_07375 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D LFM56_11345 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:cira00020]
D LFM56_13410 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LFM56_09740 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LFM56_05380 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LFM56_12125 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_05340 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LFM56_05335 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LFM56_08580 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LFM56_13320 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LFM56_08585 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LFM56_13325 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LFM56_08575 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LFM56_13310 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LFM56_13315 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LFM56_13565 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LFM56_05385 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_17820 lactate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_08645 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D LFM56_07295 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LFM56_07465 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cira00030]
D LFM56_11645 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LFM56_01400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LFM56_08375 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LFM56_09665 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D LFM56_18185 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D LFM56_01130 hypothetical protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LFM56_08950 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LFM56_06735 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LFM56_08385 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LFM56_01165 hypothetical protein K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LFM56_08380 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LFM56_11295 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LFM56_17080 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LFM56_05180 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D LFM56_13255 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D LFM56_12645 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D LFM56_01910 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LFM56_13955 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LFM56_02985 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LFM56_01830 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D LFM56_02990 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D LFM56_03250 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LFM56_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_08245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_07645 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cira00040]
D LFM56_11635 pectate lyase K22539 PLY; pectate lyase [EC:4.2.2.2]
D LFM56_02980 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D LFM56_03130 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D LFM56_02970 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D LFM56_14485 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LFM56_14640 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LFM56_14100 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LFM56_04205 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D LFM56_01130 hypothetical protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LFM56_08950 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LFM56_04210 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D LFM56_01160 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D LFM56_15250 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D LFM56_15245 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D LFM56_13670 FAD-binding protein K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D LFM56_16175 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
C 00051 Fructose and mannose metabolism [PATH:cira00051]
D LFM56_04035 cellulase family glycosylhydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D LFM56_13530 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LFM56_06115 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LFM56_13245 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LFM56_13305 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LFM56_13880 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LFM56_13930 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LFM56_00690 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D LFM56_03000 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D LFM56_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_08245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_07645 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D LFM56_05125 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D LFM56_13670 FAD-binding protein K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D LFM56_15245 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D LFM56_03250 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LFM56_08345 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LFM56_11295 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LFM56_17080 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LFM56_05130 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D LFM56_05135 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LFM56_05115 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D LFM56_05110 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:cira00052]
D LFM56_17265 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D LFM56_12095 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D LFM56_05560 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LFM56_05565 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D LFM56_06360 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LFM56_14100 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LFM56_01910 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LFM56_07630 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11605 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11160 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D LFM56_02920 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D LFM56_02925 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D LFM56_03050 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D LFM56_08595 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D LFM56_12850 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D LFM56_13115 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D LFM56_12765 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D LFM56_16325 ricin-type beta-trefoil lectin domain protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D LFM56_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_08245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_02020 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D LFM56_07155 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D LFM56_12450 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:cira00053]
D LFM56_14485 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LFM56_14640 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LFM56_00690 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D LFM56_04205 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:cira00500]
D LFM56_02020 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D LFM56_07155 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D LFM56_01040 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D LFM56_12310 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D LFM56_14100 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LFM56_02875 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_03215 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_12875 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13090 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13095 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13105 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_12840 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D LFM56_17355 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D LFM56_02840 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_03595 glycoside hydrolase family 6 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_08705 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_10715 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_17995 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_18100 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_08710 glycoside hydrolase family 6 protein K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D LFM56_17270 glycosyl transferase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D LFM56_09870 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D LFM56_12780 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D LFM56_15845 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D LFM56_13195 alpha amylase C-terminal domain-containing protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D LFM56_12735 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D LFM56_00560 alpha-amylase family protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D LFM56_12450 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D LFM56_11330 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D LFM56_12730 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D LFM56_09865 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D LFM56_11345 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LFM56_09585 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D LFM56_12715 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D LFM56_09590 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D LFM56_09595 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D LFM56_15110 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D LFM56_15115 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D LFM56_01910 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LFM56_07630 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11605 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11645 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LFM56_13530 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cira00520]
D LFM56_03910 cellulose binding domain-containing protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D LFM56_14090 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D LFM56_11345 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LFM56_11600 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D LFM56_13530 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LFM56_04955 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LFM56_04930 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D LFM56_13960 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LFM56_06520 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LFM56_04585 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LFM56_17780 dihydrodipicolinate synthase family protein K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D LFM56_14615 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LFM56_14645 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D LFM56_06250 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D LFM56_00470 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D LFM56_02805 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D LFM56_03140 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D LFM56_16330 family 43 glycosylhydrolase K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D LFM56_16335 carbohydrate-binding protein K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D LFM56_00370 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D LFM56_03040 xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D LFM56_17110 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D LFM56_07630 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11605 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_04890 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D LFM56_07375 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D LFM56_01910 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LFM56_14100 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LFM56_14485 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LFM56_14640 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LFM56_05560 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LFM56_05565 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D LFM56_06360 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LFM56_13115 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D LFM56_11645 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LFM56_06115 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LFM56_13245 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LFM56_13305 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LFM56_13880 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LFM56_13930 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LFM56_09870 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cira00620]
D LFM56_04045 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_11265 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_07295 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LFM56_07465 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_09705 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D LFM56_13130 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D LFM56_05170 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LFM56_05175 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LFM56_08135 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LFM56_13210 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D LFM56_01860 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D LFM56_10485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LFM56_01845 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D LFM56_09220 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D LFM56_04060 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LFM56_05385 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_17820 lactate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_08645 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D LFM56_13565 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LFM56_06825 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LFM56_07015 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_07090 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D LFM56_12385 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cira00630]
D LFM56_04045 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_11265 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_05385 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_17820 lactate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_13410 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LFM56_09740 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_13210 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D LFM56_13175 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D LFM56_10205 catalase K03781 katE; catalase [EC:1.11.1.6]
D LFM56_11000 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LFM56_11005 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LFM56_07395 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_07410 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LFM56_17755 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LFM56_17750 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_17745 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D LFM56_07545 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D LFM56_02985 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LFM56_12125 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D LFM56_05460 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:cira00640]
D LFM56_04045 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_11265 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_01860 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D LFM56_05170 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LFM56_05175 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LFM56_00950 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LFM56_00955 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LFM56_00960 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_09705 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D LFM56_03410 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D LFM56_13210 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D LFM56_13175 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D LFM56_05335 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LFM56_05340 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LFM56_10485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cira00650]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_13130 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D LFM56_08580 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LFM56_13320 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LFM56_08585 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LFM56_13325 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LFM56_08575 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LFM56_13310 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LFM56_13315 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LFM56_03430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LFM56_05150 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LFM56_10660 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LFM56_09705 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D LFM56_12415 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LFM56_12410 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cira00660]
D LFM56_12415 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LFM56_12410 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LFM56_05335 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LFM56_05340 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LFM56_06510 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D LFM56_06515 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D LFM56_12395 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cira00562]
D LFM56_09820 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LFM56_00115 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D LFM56_09320 CDP-alcohol phosphatidyltransferase family protein K27681
D LFM56_08345 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cira00190]
D LFM56_04430 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D LFM56_04435 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D LFM56_04440 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D LFM56_04445 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D LFM56_04450 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D LFM56_04455 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D LFM56_04460 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D LFM56_04465 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D LFM56_04470 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D LFM56_04475 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D LFM56_04480 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D LFM56_04485 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D LFM56_04490 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D LFM56_04495 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D LFM56_11970 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D LFM56_13795 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D LFM56_08580 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LFM56_13320 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LFM56_08585 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LFM56_13325 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LFM56_08575 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LFM56_13310 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LFM56_13315 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LFM56_07590 Rieske 2Fe-2S domain-containing protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LFM56_07585 ubiquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D LFM56_07595 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D LFM56_08390 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LFM56_07570 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D LFM56_07600 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D LFM56_07565 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D LFM56_07560 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D LFM56_09990 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LFM56_06670 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LFM56_06665 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LFM56_12925 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LFM56_12915 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LFM56_12920 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LFM56_12930 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LFM56_12910 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LFM56_17985 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LFM56_12945 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LFM56_12935 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LFM56_12940 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LFM56_15355 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D LFM56_04015 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cira00710]
D LFM56_08340 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LFM56_08335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LFM56_03250 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LFM56_06735 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LFM56_08385 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LFM56_11295 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LFM56_17080 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LFM56_08345 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LFM56_01130 hypothetical protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LFM56_08950 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LFM56_01165 hypothetical protein K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LFM56_08380 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LFM56_06825 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LFM56_07015 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LFM56_05385 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_17820 lactate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cira00720]
D LFM56_07015 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LFM56_06825 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LFM56_05385 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_17820 lactate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_13565 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LFM56_08580 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LFM56_13320 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LFM56_08585 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LFM56_13325 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LFM56_08575 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LFM56_13310 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LFM56_13315 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LFM56_05340 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LFM56_05335 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_05380 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LFM56_09740 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LFM56_05505 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LFM56_17680 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D LFM56_05175 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LFM56_05170 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LFM56_04045 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_11265 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:cira00680]
D LFM56_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LFM56_13830 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LFM56_06825 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LFM56_05385 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_17820 lactate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_03250 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LFM56_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_08245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LFM56_01045 LLM class flavin-dependent oxidoreductase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D LFM56_05170 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LFM56_05175 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LFM56_04045 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_11265 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_15225 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LFM56_10455 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LFM56_14450 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LFM56_09875 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D LFM56_11090 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D LFM56_11085 cofD; 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D LFM56_11120 coenzyme F420-0:L-glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:cira00910]
D LFM56_09450 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LFM56_09475 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LFM56_14225 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LFM56_09480 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_09485 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_09495 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_03555 nirB; nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D LFM56_09430 nirB; nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D LFM56_03560 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D LFM56_09425 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D LFM56_09455 multicopper oxidase domain-containing protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D LFM56_06035 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D LFM56_03600 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D LFM56_07395 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_07410 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_08125 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LFM56_05865 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D LFM56_08130 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D LFM56_13535 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cira00920]
D LFM56_11255 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D LFM56_11260 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D LFM56_11250 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LFM56_03510 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D LFM56_03525 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D LFM56_03940 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D LFM56_09635 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D LFM56_09630 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LFM56_09625 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D LFM56_09445 bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D LFM56_09615 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D LFM56_00445 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D LFM56_05000 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LFM56_11225 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LFM56_11220 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LFM56_15375 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LFM56_06535 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LFM56_13650 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LFM56_03360 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cira00061]
D LFM56_13210 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D LFM56_07270 acyl carrier protein K02078 acpP; acyl carrier protein
D LFM56_07280 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LFM56_07275 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LFM56_07265 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LFM56_03395 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LFM56_16850 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LFM56_07625 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_11155 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_12275 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cira00071]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_09685 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LFM56_03410 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D LFM56_07625 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_11155 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_12275 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_13130 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cira00561]
D LFM56_07545 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D LFM56_10960 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D LFM56_10955 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D LFM56_10950 dhaM; PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D LFM56_15695 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LFM56_10045 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D LFM56_02155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LFM56_07640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LFM56_08430 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LFM56_08875 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LFM56_12765 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D LFM56_16325 ricin-type beta-trefoil lectin domain protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:cira00564]
D LFM56_06530 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D LFM56_15685 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D LFM56_02155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LFM56_07640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LFM56_08430 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LFM56_13870 adenylyltransferase/cytidyltransferase family protein K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D LFM56_08875 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LFM56_00490 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LFM56_05835 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LFM56_02150 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LFM56_10800 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LFM56_02285 CDP-alcohol phosphatidyltransferase family protein K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LFM56_10620 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LFM56_08735 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cira00600]
D LFM56_11160 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D LFM56_12765 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D LFM56_16325 ricin-type beta-trefoil lectin domain protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D LFM56_14090 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:cira00592]
D LFM56_03410 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D LFM56_09685 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:cira01040]
D LFM56_03410 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D LFM56_12150 GDSL-type esterase/lipase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D LFM56_11365 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cira00230]
D LFM56_01910 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LFM56_13955 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LFM56_03615 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LFM56_03290 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D LFM56_05355 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LFM56_03440 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D LFM56_03315 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D LFM56_03320 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LFM56_03620 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D LFM56_06120 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D LFM56_06125 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D LFM56_03300 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D LFM56_00845 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LFM56_05360 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LFM56_09245 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D LFM56_03230 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D LFM56_13240 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LFM56_10320 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LFM56_12670 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D LFM56_15335 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D LFM56_05075 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LFM56_05080 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LFM56_10940 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LFM56_11535 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D LFM56_05280 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LFM56_09720 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7]
D LFM56_08985 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D LFM56_16370 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LFM56_16365 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LFM56_16100 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D LFM56_07180 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D LFM56_09240 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LFM56_13815 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D LFM56_12220 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D LFM56_13165 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LFM56_06855 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LFM56_03275 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LFM56_04590 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D LFM56_13260 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D LFM56_04845 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LFM56_09325 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D LFM56_09635 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D LFM56_09630 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cira00240]
D LFM56_09005 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LFM56_11855 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LFM56_09010 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LFM56_09025 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LFM56_09020 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D LFM56_07495 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D LFM56_03180 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D LFM56_09000 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D LFM56_10810 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D LFM56_10940 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LFM56_13205 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D LFM56_10000 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D LFM56_08425 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D LFM56_03230 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D LFM56_12670 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D LFM56_16260 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D LFM56_09030 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D LFM56_13275 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D LFM56_16100 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D LFM56_17290 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D LFM56_16370 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LFM56_16365 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LFM56_15590 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D LFM56_09805 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LFM56_13270 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D LFM56_09835 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D LFM56_10655 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LFM56_03115 cysteine hydrolase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
D LFM56_05005 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cira00250]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LFM56_15280 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LFM56_09655 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D LFM56_14775 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LFM56_07930 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LFM56_10095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LFM56_10090 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LFM56_03275 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LFM56_00845 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LFM56_09025 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LFM56_03430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LFM56_05150 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LFM56_10660 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LFM56_08125 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LFM56_05865 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D LFM56_08130 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D LFM56_06035 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D LFM56_03600 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D LFM56_05795 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LFM56_07395 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_07410 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_09005 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LFM56_11855 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LFM56_09010 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LFM56_03200 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D LFM56_03320 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LFM56_04955 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LFM56_03615 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cira00260]
D LFM56_02350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LFM56_02355 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LFM56_13010 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LFM56_13000 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D LFM56_13005 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LFM56_08700 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D LFM56_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LFM56_07545 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D LFM56_15225 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LFM56_10455 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LFM56_14450 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LFM56_09875 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D LFM56_17755 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LFM56_17750 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_17745 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D LFM56_03500 FAD-dependent oxidoreductase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D LFM56_13715 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D LFM56_13640 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LFM56_08115 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LFM56_08110 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LFM56_10155 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LFM56_00295 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D LFM56_17040 aminotransferase class V-fold PLP-dependent enzyme K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:cira00270]
D LFM56_11225 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LFM56_11220 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LFM56_17690 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LFM56_13715 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D LFM56_17480 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D LFM56_17685 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D LFM56_08970 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LFM56_11690 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D LFM56_10320 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LFM56_11685 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D LFM56_02350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LFM56_02355 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LFM56_13010 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LFM56_15375 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LFM56_06535 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LFM56_13650 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LFM56_11270 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D LFM56_15370 bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D LFM56_03360 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D LFM56_09350 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_12390 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LFM56_05000 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LFM56_10485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LFM56_05385 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_17820 lactate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LFM56_10455 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LFM56_14450 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cira00280]
D LFM56_09350 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_12390 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_00950 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LFM56_00955 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LFM56_00960 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_09685 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LFM56_13210 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D LFM56_13175 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D LFM56_17090 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cira00290]
D LFM56_13640 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LFM56_06510 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D LFM56_06515 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D LFM56_12395 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D LFM56_12415 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LFM56_12410 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LFM56_12405 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D LFM56_12530 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LFM56_12535 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LFM56_09350 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_12390 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_14775 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LFM56_07090 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D LFM56_12385 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cira00300]
D LFM56_13010 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LFM56_02350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LFM56_02355 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LFM56_10645 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LFM56_10685 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D LFM56_13400 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D LFM56_10110 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LFM56_13145 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D LFM56_13395 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LFM56_10515 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LFM56_13045 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D LFM56_00055 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D LFM56_10365 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LFM56_10360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cira00310]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_05150 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LFM56_10660 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cira00220]
D LFM56_10105 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D LFM56_10095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LFM56_10090 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LFM56_14405 N-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D LFM56_14735 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D LFM56_14730 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D LFM56_03200 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D LFM56_03320 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LFM56_07395 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_07410 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_09005 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LFM56_11855 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LFM56_09010 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LFM56_06035 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D LFM56_03600 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LFM56_14775 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LFM56_15675 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D LFM56_10120 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D LFM56_10115 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D LFM56_10125 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D LFM56_10110 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cira00330]
D LFM56_00600 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D LFM56_00605 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D LFM56_00575 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_02955 dockerin type I domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_14405 N-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D LFM56_14410 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D LFM56_04190 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D LFM56_05795 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LFM56_06695 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LFM56_06700 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cira00340]
D LFM56_08915 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D LFM56_08920 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D LFM56_08070 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D LFM56_10245 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D LFM56_10250 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D LFM56_08050 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D LFM56_10260 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D LFM56_00935 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_10265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_12200 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D LFM56_10275 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cira00350]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LFM56_00935 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_10265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_13130 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D LFM56_05150 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LFM56_10660 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:cira00360]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LFM56_00935 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_10265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_00575 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_02955 dockerin type I domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_01330 FAD-dependent oxidoreductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
D LFM56_09955 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:cira00380]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_00575 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_02955 dockerin type I domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_10205 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cira00400]
D LFM56_07650 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LFM56_09060 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D LFM56_00660 aroD; type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D LFM56_09065 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D LFM56_12190 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D LFM56_09070 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D LFM56_08075 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LFM56_07610 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D LFM56_10245 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D LFM56_08105 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D LFM56_08115 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LFM56_08110 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LFM56_10155 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LFM56_11170 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D LFM56_08420 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D LFM56_01935 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LFM56_00935 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_10265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cira00410]
D LFM56_15285 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LFM56_03430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LFM56_15290 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LFM56_03410 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 00430 Taurine and hypotaurine metabolism [PATH:cira00430]
D LFM56_03430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LFM56_03005 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LFM56_07930 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LFM56_05175 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LFM56_05170 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cira00450]
D LFM56_06535 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LFM56_13650 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LFM56_17690 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LFM56_17480 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D LFM56_17685 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D LFM56_09945 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D LFM56_00065 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LFM56_15900 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LFM56_09635 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D LFM56_09630 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LFM56_00275 class I tRNA ligase family protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LFM56_14065 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cira00460]
D LFM56_02875 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_03215 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_12875 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13090 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13095 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13105 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_12840 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D LFM56_17355 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D LFM56_03005 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LFM56_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cira00470]
D LFM56_02815 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_04980 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_15955 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_00050 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_06540 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_15960 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_03200 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D LFM56_03320 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LFM56_11555 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LFM56_10350 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LFM56_09655 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D LFM56_10515 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LFM56_13045 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cira00480]
D LFM56_03005 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LFM56_04130 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D LFM56_05045 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LFM56_07150 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LFM56_07480 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LFM56_13370 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LFM56_11320 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LFM56_05380 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LFM56_09665 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D LFM56_18185 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D LFM56_01400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LFM56_08375 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cira00515]
D LFM56_14085 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cira00514]
D LFM56_14085 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cira00511]
D LFM56_11160 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D LFM56_14090 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D LFM56_12770 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D LFM56_03015 glycoside hydrolase family 95 protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cira00542]
D LFM56_12955 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cira00541]
D LFM56_14100 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LFM56_06360 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LFM56_13115 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D LFM56_14485 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LFM56_14640 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LFM56_06315 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LFM56_06145 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LFM56_06225 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LFM56_06230 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LFM56_06280 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D LFM56_06115 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LFM56_13245 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LFM56_13305 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LFM56_13880 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LFM56_13930 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LFM56_13960 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LFM56_14615 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LFM56_14645 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D LFM56_06250 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:cira00550]
D LFM56_06520 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LFM56_04585 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LFM56_10335 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LFM56_10350 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LFM56_10365 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LFM56_00050 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_06540 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_15960 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_10360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LFM56_07100 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LFM56_07960 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LFM56_10355 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LFM56_10370 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LFM56_18045 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D LFM56_15350 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LFM56_00555 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03585 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03735 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_12100 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_14910 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_15535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:cira00552]
D LFM56_07960 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LFM56_12955 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cira00543]
D LFM56_13875 glycosyltransferase family 4 protein K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D LFM56_13925 putative colanic acid biosynthesis acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D LFM56_12955 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D LFM56_11225 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cira00730]
D LFM56_10140 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D LFM56_07555 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_12695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_09710 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LFM56_10150 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LFM56_10145 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D LFM56_06550 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D LFM56_03590 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LFM56_12195 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LFM56_04845 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cira00740]
D LFM56_08935 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LFM56_08945 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LFM56_08930 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LFM56_08940 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D LFM56_10710 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D LFM56_03525 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D LFM56_03940 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D LFM56_10150 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:cira00750]
D LFM56_12255 pyridoxal 5'-phosphate synthase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D LFM56_03420 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D LFM56_14450 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LFM56_13005 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LFM56_09300 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D LFM56_09285 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cira00760]
D LFM56_15280 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LFM56_07540 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D LFM56_15270 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D LFM56_11570 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D LFM56_13240 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LFM56_03230 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D LFM56_06710 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D LFM56_05655 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D LFM56_09335 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D LFM56_10615 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D LFM56_14075 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D LFM56_02600 Sir2 family NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D LFM56_10030 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LFM56_13850 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LFM56_13845 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D LFM56_05150 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LFM56_10660 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cira00770]
D LFM56_12415 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LFM56_12410 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LFM56_12405 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D LFM56_12530 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LFM56_12535 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LFM56_07390 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D LFM56_08820 oxidoreductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D LFM56_15290 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LFM56_04950 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D LFM56_08975 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D LFM56_06610 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D LFM56_08255 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D LFM56_04960 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D LFM56_09350 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_12390 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_15285 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:cira00780]
D LFM56_07265 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LFM56_03395 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LFM56_16850 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LFM56_13170 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cira00785]
D LFM56_07435 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D LFM56_07425 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D LFM56_12375 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_07295 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LFM56_07465 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LFM56_12125 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D LFM56_00950 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LFM56_00955 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LFM56_00960 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LFM56_17755 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LFM56_17750 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LFM56_17745 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cira00790]
D LFM56_15325 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D LFM56_13385 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D LFM56_15320 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D LFM56_10650 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LFM56_10990 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D LFM56_08935 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LFM56_18060 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D LFM56_09355 chorismate-binding protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D LFM56_13490 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LFM56_09525 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D LFM56_09515 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D LFM56_09535 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D LFM56_09520 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D LFM56_14140 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cira00670]
D LFM56_10650 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LFM56_05505 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LFM56_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LFM56_05355 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LFM56_05360 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LFM56_08960 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LFM56_17750 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LFM56_10655 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LFM56_05460 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D LFM56_17680 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D LFM56_14145 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cira00860]
D LFM56_12215 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LFM56_00835 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D LFM56_00805 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LFM56_00810 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LFM56_00820 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D LFM56_09415 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D LFM56_00830 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D LFM56_06015 flavodoxin domain-containing protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D LFM56_07430 flavodoxin domain-containing protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D LFM56_00825 FAD-dependent oxidoreductase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D LFM56_06025 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D LFM56_06030 chlorite dismutase family protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D LFM56_00815 uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D LFM56_03565 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D LFM56_09420 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D LFM56_09640 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D LFM56_14200 TIGR04053 family radical SAM/SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D LFM56_08390 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LFM56_09990 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LFM56_07330 histidine phosphatase family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D LFM56_13015 biliverdin-producing heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D LFM56_06800 TIGR03618 family F420-dependent PPOX class oxidoreductase K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cira00130]
D LFM56_04420 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D LFM56_04415 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D LFM56_04405 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D LFM56_04400 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D LFM56_04380 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D LFM56_04395 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D LFM56_04375 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D LFM56_17895 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LFM56_01525 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LFM56_16770 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cira00900]
D LFM56_09710 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LFM56_10785 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D LFM56_15175 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D LFM56_14040 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D LFM56_15170 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D LFM56_10770 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D LFM56_13515 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_02750 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D LFM56_03690 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D LFM56_07670 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D LFM56_13605 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D LFM56_07100 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cira00906]
D LFM56_03695 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:cira00907]
D LFM56_09685 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D LFM56_06735 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LFM56_08385 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cira00523]
D LFM56_06315 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LFM56_06145 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LFM56_06225 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LFM56_06230 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:cira01054]
D LFM56_09655 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D LFM56_04415 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D LFM56_06145 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:cira00946]
D LFM56_02875 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_03215 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_12875 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13090 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13095 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13105 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_12840 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D LFM56_17355 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:cira00311]
D LFM56_13710 acetylxylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D LFM56_14150 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:cira00332]
D LFM56_06695 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LFM56_06700 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cira00261]
D LFM56_09635 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D LFM56_09630 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LFM56_02350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LFM56_02355 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LFM56_10645 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LFM56_10685 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cira00521]
D LFM56_07630 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11605 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_01910 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LFM56_00115 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D LFM56_09820 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LFM56_06315 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LFM56_06145 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LFM56_06225 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LFM56_06230 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D LFM56_07630 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D LFM56_11605 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cira00525]
D LFM56_12025 sedoheptulose 7-phosphate cyclase K19969 acbC; 2-epi-5-epi-valiolone synthase [EC:4.2.3.152]
D LFM56_06315 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LFM56_06145 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LFM56_12045 hypothetical protein K20431 cetB; 2-epi-5-epi-valiolone epimerase [EC:5.1.3.33]
C 00401 Novobiocin biosynthesis [PATH:cira00401]
D LFM56_08420 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LFM56_00935 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_10265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D LFM56_08075 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D LFM56_07280 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LFM56_03395 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LFM56_16850 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D LFM56_07270 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cira00999]
D LFM56_08970 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LFM56_02875 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_03215 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_12875 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13090 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13095 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_13105 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LFM56_12840 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D LFM56_17355 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cira00362]
D LFM56_09685 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LFM56_01700 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D LFM56_00575 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_02955 dockerin type I domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cira00625]
D LFM56_13130 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D LFM56_01700 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:cira00622]
D LFM56_01700 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D LFM56_09685 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:cira00643]
D LFM56_00575 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_02955 dockerin type I domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LFM56_01700 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LFM56_01860 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation [PATH:cira00791]
D LFM56_14730 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D LFM56_14735 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cira00626]
D LFM56_13130 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cira03020]
D LFM56_04695 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LFM56_04700 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LFM56_04875 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LFM56_08980 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D LFM56_14680 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cira03010]
D LFM56_08250 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LFM56_10820 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LFM56_04770 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LFM56_09175 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LFM56_04825 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LFM56_00130 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LFM56_04720 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LFM56_04810 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LFM56_04925 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LFM56_04735 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LFM56_04870 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LFM56_04715 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LFM56_04865 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LFM56_04805 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LFM56_17220 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LFM56_10705 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LFM56_10890 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LFM56_00140 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LFM56_04760 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LFM56_06945 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LFM56_04650 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LFM56_04755 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LFM56_04745 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LFM56_04800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LFM56_04815 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LFM56_04680 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LFM56_00145 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LFM56_04675 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LFM56_04645 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LFM56_04920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LFM56_04790 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LFM56_04835 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LFM56_04775 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LFM56_04880 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LFM56_04820 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LFM56_10870 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LFM56_10185 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LFM56_06680 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LFM56_04765 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LFM56_04750 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LFM56_04795 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LFM56_13945 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D LFM56_06685 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LFM56_06575 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LFM56_17230 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LFM56_04780 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LFM56_04830 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LFM56_12975 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LFM56_17215 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LFM56_06625 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LFM56_17205 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LFM56_04555 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LFM56_17225 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LFM56_00010 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LFM56_10190 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LFM56_04860 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LFM56_17210 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LFM56_12795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LFM56_10065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LFM56_10060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LFM56_12790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LFM56_12785 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LFM56_10055 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cira00970]
D LFM56_14125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LFM56_18145 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LFM56_06730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LFM56_15995 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LFM56_14320 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LFM56_11420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LFM56_13060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LFM56_07210 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LFM56_03655 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LFM56_09365 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LFM56_06495 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LFM56_13995 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LFM56_03660 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LFM56_06500 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LFM56_17245 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LFM56_09360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LFM56_11195 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LFM56_11445 tRNA-His K14226 tRNA-His; tRNA His
D LFM56_18155 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LFM56_18020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_07880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_08160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_13790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_11505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_03770 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LFM56_11485 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LFM56_04550 tRNA-Met K14230 tRNA-Met; tRNA Met
D LFM56_05720 tRNA-Met K14230 tRNA-Met; tRNA Met
D LFM56_07240 tRNA-Ile K14230 tRNA-Met; tRNA Met
D LFM56_03650 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LFM56_11210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LFM56_08455 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LFM56_02450 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LFM56_16035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LFM56_02025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LFM56_02245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LFM56_16240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LFM56_15575 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LFM56_15090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LFM56_04545 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LFM56_04630 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LFM56_04535 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LFM56_09370 tRNA-Val K14237 tRNA-Val; tRNA Val
D LFM56_07310 tRNA-Val K14237 tRNA-Val; tRNA Val
D LFM56_09340 tRNA-Val K14237 tRNA-Val; tRNA Val
D LFM56_12215 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LFM56_12590 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LFM56_12585 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LFM56_12595 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LFM56_09160 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LFM56_09200 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LFM56_07130 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D LFM56_09330 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LFM56_01945 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LFM56_15135 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LFM56_00275 class I tRNA ligase family protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LFM56_14065 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LFM56_08960 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LFM56_11135 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LFM56_06910 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LFM56_10995 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LFM56_15265 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LFM56_15850 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LFM56_13050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LFM56_10755 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LFM56_09215 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LFM56_10170 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LFM56_10165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LFM56_10070 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LFM56_13340 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cira03060]
D LFM56_04840 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LFM56_04635 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LFM56_08350 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LFM56_09255 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LFM56_09250 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LFM56_09260 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LFM56_00025 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_05750 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_06455 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LFM56_10905 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LFM56_12990 hypothetical protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LFM56_02270 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D LFM56_10925 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LFM56_08885 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D LFM56_13345 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D LFM56_08880 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D LFM56_10865 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LFM56_10295 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LFM56_03955 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D LFM56_15065 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D LFM56_15825 S26 family signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cira04122]
D LFM56_07555 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_12695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_05000 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LFM56_12690 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LFM56_09535 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D LFM56_09525 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D LFM56_09530 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D LFM56_09505 ThiF family adenylyltransferase K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D LFM56_09515 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome [PATH:cira03050]
D LFM56_08010 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D LFM56_08035 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D LFM56_08030 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:cira03018]
D LFM56_06675 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LFM56_13830 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LFM56_10700 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LFM56_08725 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LFM56_03170 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_10270 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_11965 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_12995 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LFM56_10570 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D LFM56_10640 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D LFM56_16455 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LFM56_15025 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LFM56_04015 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LFM56_00090 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cira03030]
D LFM56_07620 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LFM56_10285 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LFM56_02290 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LFM56_15585 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LFM56_06930 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LFM56_18190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LFM56_00165 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LFM56_07190 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LFM56_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_11405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_12270 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LFM56_07330 histidine phosphatase family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D LFM56_10860 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LFM56_08205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LFM56_12620 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cira03410]
D LFM56_02490 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LFM56_15050 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LFM56_15670 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LFM56_10075 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D LFM56_06635 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LFM56_10760 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LFM56_02105 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D LFM56_10605 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D LFM56_05945 AlkA protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LFM56_17670 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LFM56_01455 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LFM56_05515 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LFM56_15705 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LFM56_15085 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D LFM56_08205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LFM56_12620 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cira03420]
D LFM56_13865 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LFM56_08305 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D LFM56_08265 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D LFM56_08315 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D LFM56_05325 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_05645 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_05665 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_08205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LFM56_12620 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LFM56_14680 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cira03430]
D LFM56_05325 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_05645 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_05665 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_13520 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LFM56_13525 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LFM56_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_11405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_10285 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LFM56_18190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LFM56_02290 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LFM56_06930 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LFM56_15585 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LFM56_07620 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LFM56_12620 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cira03440]
D LFM56_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_11405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_18180 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D LFM56_07095 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LFM56_02320 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D LFM56_10580 recA; recombinase RecA K03553 recA; recombination protein RecA
D LFM56_08205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LFM56_09270 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LFM56_09265 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LFM56_09275 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LFM56_06585 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LFM56_05825 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D LFM56_05830 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D LFM56_05820 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LFM56_10285 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LFM56_18190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LFM56_02290 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LFM56_06930 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LFM56_15585 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LFM56_07620 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LFM56_08965 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:cira03450]
D LFM56_08680 Ku protein K10979 ku; DNA end-binding protein Ku
D LFM56_08675 ligD; non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D LFM56_14220 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cira03250]
D LFM56_18090 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cira02010]
D LFM56_11255 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D LFM56_11260 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D LFM56_11250 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LFM56_09545 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D LFM56_09550 ABC transporter permease K02018 modB; molybdate transport system permease protein
D LFM56_09555 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D LFM56_16980 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D LFM56_16975 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D LFM56_16970 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D LFM56_06375 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D LFM56_06380 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D LFM56_11470 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D LFM56_11460 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D LFM56_11465 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D LFM56_11455 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D LFM56_08600 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D LFM56_08605 ABC transporter permease subunit K10109 malF; maltose/maltodextrin transport system permease protein
D LFM56_13545 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LFM56_15120 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LFM56_07165 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D LFM56_07170 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D LFM56_07175 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D LFM56_08610 ABC transporter permease subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D LFM56_16185 carbohydrate ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D LFM56_01020 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D LFM56_12555 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D LFM56_01025 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LFM56_12550 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LFM56_12755 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LFM56_01030 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LFM56_12545 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LFM56_12760 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LFM56_01955 ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D LFM56_01960 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D LFM56_01965 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D LFM56_03035 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D LFM56_12335 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D LFM56_12870 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D LFM56_16135 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D LFM56_03025 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D LFM56_12340 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D LFM56_12865 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D LFM56_16130 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D LFM56_03030 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D LFM56_12345 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D LFM56_12860 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D LFM56_16125 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D LFM56_13560 extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D LFM56_13555 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D LFM56_13550 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D LFM56_06055 extracellular solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D LFM56_06050 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D LFM56_06045 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D LFM56_11620 extracellular solute-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D LFM56_11615 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D LFM56_11610 carbohydrate ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D LFM56_03550 extracellular solute-binding protein K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D LFM56_03540 sugar ABC transporter permease K17235 araP; arabinooligosaccharide transport system permease protein
D LFM56_03545 carbohydrate ABC transporter permease K17236 araQ; arabinooligosaccharide transport system permease protein
D LFM56_05400 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D LFM56_05425 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D LFM56_14815 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D LFM56_05410 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D LFM56_05435 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D LFM56_05405 ATP-binding cassette domain-containing protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LFM56_05430 ATP-binding cassette domain-containing protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LFM56_12665 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D LFM56_13295 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D LFM56_12655 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LFM56_13285 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LFM56_12650 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LFM56_13280 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LFM56_12660 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LFM56_13290 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LFM56_01145 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D LFM56_01140 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D LFM56_01150 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D LFM56_02765 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D LFM56_03145 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D LFM56_02775 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D LFM56_02780 sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein
D LFM56_03155 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D LFM56_03160 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D LFM56_02770 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D LFM56_03150 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D LFM56_05420 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D LFM56_05445 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D LFM56_00485 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D LFM56_00475 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D LFM56_00480 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D LFM56_15205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LFM56_15200 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D LFM56_15195 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D LFM56_15190 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LFM56_10555 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D LFM56_10560 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D LFM56_10565 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D LFM56_10550 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D LFM56_12250 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D LFM56_12245 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D LFM56_12240 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D LFM56_08170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LFM56_08190 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LFM56_08185 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LFM56_08180 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LFM56_08175 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LFM56_02055 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D LFM56_02060 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D LFM56_02065 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D LFM56_14770 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D LFM56_14765 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D LFM56_14760 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D LFM56_14755 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D LFM56_14750 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D LFM56_08240 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D LFM56_13485 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D LFM56_13480 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D LFM56_13475 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D LFM56_01790 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D LFM56_05095 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D LFM56_01805 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D LFM56_05090 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D LFM56_14250 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D LFM56_01810 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D LFM56_05085 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D LFM56_14245 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D LFM56_05160 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D LFM56_05155 iron ABC transporter permease K23228 fhuB; ferric hydroxamate transport system permease protein
D LFM56_05165 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D LFM56_17510 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D LFM56_17520 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D LFM56_17515 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D LFM56_07125 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D LFM56_07115 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D LFM56_07120 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D LFM56_09915 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D LFM56_09925 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D LFM56_09920 energy-coupling factor ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D LFM56_06160 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D LFM56_06165 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D LFM56_14605 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D LFM56_14610 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D LFM56_16420 ABC transporter permease K18233 oleC5; oleandomycin transport system permease protein
D LFM56_16425 ATP-binding cassette domain-containing protein K18232 oleC4; oleandomycin transport system ATP-binding protein
D LFM56_11990 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D LFM56_11995 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D LFM56_07750 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D LFM56_07755 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D LFM56_06655 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D LFM56_11530 ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cira02060]
D LFM56_05145 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LFM56_11355 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LFM56_05140 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D LFM56_11345 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LFM56_05115 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D LFM56_05110 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D LFM56_05135 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LFM56_05130 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D LFM56_05125 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cira03070]
D LFM56_09255 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LFM56_09250 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LFM56_04635 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LFM56_08350 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LFM56_04840 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LFM56_09260 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LFM56_00025 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_05750 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_06455 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LFM56_10925 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LFM56_10905 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LFM56_12990 hypothetical protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LFM56_08885 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D LFM56_13345 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D LFM56_08880 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cira02020]
D LFM56_02310 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D LFM56_15215 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D LFM56_15210 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D LFM56_15205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LFM56_14985 flagellin K02406 fliC; flagellin
D LFM56_10830 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LFM56_14995 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LFM56_14900 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D LFM56_01625 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LFM56_01620 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LFM56_01640 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D LFM56_01635 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D LFM56_01630 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D LFM56_09990 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LFM56_04410 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D LFM56_13350 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D LFM56_06430 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D LFM56_06425 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D LFM56_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LFM56_17510 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D LFM56_17515 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D LFM56_17520 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D LFM56_03725 HAMP domain-containing histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D LFM56_03730 response regulator transcription factor K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D LFM56_15950 dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LFM56_00555 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03585 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03735 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_12100 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_14910 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_15535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_04060 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LFM56_09480 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_09485 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_09495 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_09490 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D LFM56_05020 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LFM56_05025 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D LFM56_06650 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D LFM56_06645 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D LFM56_05210 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D LFM56_05215 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D LFM56_04085 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LFM56_05225 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LFM56_12090 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LFM56_04090 type II secretion system F family protein K12510 tadB; tight adherence protein B
D LFM56_05230 type II secretion system F family protein K12510 tadB; tight adherence protein B
D LFM56_12085 type II secretion system F family protein K12510 tadB; tight adherence protein B
D LFM56_05235 type II secretion system F family protein K12511 tadC; tight adherence protein C
D LFM56_12080 type II secretion system F family protein K12511 tadC; tight adherence protein C
D LFM56_10915 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D LFM56_07395 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_07410 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_09110 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D LFM56_14800 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LFM56_07405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_10085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_14810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_14820 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_15840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_17320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_17415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_14825 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LFM56_14830 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LFM56_14785 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_14795 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_17725 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_14805 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LFM56_00695 SpoIIE family protein phosphatase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D LFM56_02480 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LFM56_03200 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D LFM56_06670 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LFM56_06665 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LFM56_13910 hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D LFM56_14555 low molecular weight phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D LFM56_17865 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D LFM56_14615 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LFM56_14645 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D LFM56_02840 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_03595 glycoside hydrolase family 6 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_08705 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_10715 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_17995 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_18100 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LFM56_08710 glycoside hydrolase family 6 protein K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cira02024]
D LFM56_11685 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D LFM56_08075 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LFM56_06220 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D LFM56_07650 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LFM56_01620 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LFM56_03430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LFM56_00580 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D LFM56_00595 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D LFM56_00590 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D LFM56_00585 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D LFM56_08170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LFM56_08190 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LFM56_08185 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LFM56_08180 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LFM56_08175 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LFM56_07625 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_11155 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_12275 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_02480 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LFM56_04035 cellulase family glycosylhydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D LFM56_08945 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LFM56_08240 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D LFM56_03455 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LFM56_08225 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LFM56_13460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LFM56_17330 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LFM56_03460 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LFM56_08230 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LFM56_17335 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LFM56_03465 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LFM56_08235 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LFM56_17340 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LFM56_03470 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LFM56_17345 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LFM56_13465 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LFM56_00025 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_05750 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_09760 helix-turn-helix domain-containing protein K20388 cylR2; HTH-type transcriptional regulator, cytolysin regulator
D LFM56_04635 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LFM56_08350 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LFM56_04840 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LFM56_09260 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LFM56_06455 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LFM56_10925 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LFM56_10905 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LFM56_12990 hypothetical protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cira02030]
D LFM56_07405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_10085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_14810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_14820 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_15840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_17320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_17415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_08600 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D LFM56_01145 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D LFM56_14830 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LFM56_14825 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LFM56_14785 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_14795 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_17725 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_14805 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LFM56_14800 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LFM56_14945 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LFM56_14885 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LFM56_14880 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LFM56_14900 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D LFM56_14895 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cira02040]
D LFM56_14955 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D LFM56_14950 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LFM56_14945 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LFM56_14935 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LFM56_14890 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D LFM56_14885 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LFM56_14880 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LFM56_14870 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D LFM56_14865 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LFM56_14860 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D LFM56_14850 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D LFM56_14855 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D LFM56_14965 flagellar basal body protein K02387 flgB; flagellar basal-body rod protein FlgB
D LFM56_14960 flagellar basal body protein K02388 flgC; flagellar basal-body rod protein FlgC
D LFM56_14920 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D LFM56_14915 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D LFM56_15005 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D LFM56_15010 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D LFM56_14985 flagellin K02406 fliC; flagellin
D LFM56_14980 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D LFM56_14975 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D LFM56_14900 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D LFM56_14895 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D LFM56_12250 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D LFM56_07690 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D LFM56_10830 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LFM56_14995 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D LFM56_13830 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cira01501]
D LFM56_08240 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D LFM56_10370 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cira01502]
D LFM56_03725 HAMP domain-containing histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D LFM56_03730 response regulator transcription factor K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D LFM56_15950 dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LFM56_00050 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_06540 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_15960 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_02815 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_04980 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_15955 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_10360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LFM56_10355 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LFM56_00555 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03585 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03735 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_12100 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_14910 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_15535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D LFM56_18090 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cira01000]
C 01001 Protein kinases [BR:cira01001]
D LFM56_02655 serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D LFM56_06020 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LFM56_07655 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LFM56_18050 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LFM56_18055 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LFM56_01055 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D LFM56_17525 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D LFM56_17715 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D LFM56_13905 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D LFM56_14540 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D LFM56_15215 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D LFM56_01625 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LFM56_06430 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D LFM56_03725 HAMP domain-containing histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D LFM56_14710 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LFM56_15625 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LFM56_05020 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LFM56_06650 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D LFM56_14830 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LFM56_00695 SpoIIE family protein phosphatase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D LFM56_06065 PAS domain-containing sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cira01009]
D LFM56_03060 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D LFM56_04505 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D LFM56_07045 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D LFM56_18035 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D LFM56_09875 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cira01002]
D LFM56_10295 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LFM56_09090 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LFM56_05280 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LFM56_14440 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D LFM56_03615 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LFM56_08125 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LFM56_04955 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LFM56_16890 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D LFM56_01450 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D LFM56_14195 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D LFM56_15980 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D LFM56_11320 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LFM56_07935 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D LFM56_11300 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D LFM56_00555 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03585 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03735 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_12100 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_14910 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_15535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_15950 dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LFM56_07480 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LFM56_13370 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LFM56_13395 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LFM56_04850 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LFM56_07380 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LFM56_17570 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LFM56_17885 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LFM56_05605 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D LFM56_15330 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LFM56_04525 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LFM56_02810 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D LFM56_04410 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D LFM56_13350 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D LFM56_03670 S1 family peptidase K18546 sprC; streptogrisin C [EC:3.4.21.-]
D LFM56_11335 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D LFM56_02695 prolyl oligopeptidase family serine peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D LFM56_15350 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LFM56_07900 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LFM56_07905 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LFM56_11180 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LFM56_11185 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LFM56_05695 PDZ domain-containing protein K07177 K07177; Lon-like protease
D LFM56_10475 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D LFM56_10865 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LFM56_03955 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D LFM56_15065 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D LFM56_15825 S26 family signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D LFM56_14150 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D LFM56_16545 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D LFM56_11015 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LFM56_08035 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D LFM56_08030 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D LFM56_03005 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:cira01003]
D LFM56_09575 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D LFM56_14085 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D LFM56_09310 glycosyltransferase family 4 protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D LFM56_09865 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D LFM56_12955 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D LFM56_06340 glycosyltransferase family 2 protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D LFM56_15110 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cira01005]
D LFM56_06220 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D LFM56_12955 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cira01011]
D LFM56_06520 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LFM56_04585 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LFM56_10335 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LFM56_10350 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LFM56_10365 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LFM56_00050 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_06540 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_15960 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LFM56_02815 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_04980 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_15955 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LFM56_11555 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LFM56_11015 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LFM56_10355 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LFM56_07960 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LFM56_00075 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LFM56_10370 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LFM56_18045 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D LFM56_15350 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LFM56_15950 dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LFM56_00555 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03585 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03735 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_12100 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_14910 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_15535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_14440 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D LFM56_09150 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:cira01004]
D LFM56_07280 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LFM56_07275 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LFM56_07265 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LFM56_03395 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LFM56_16850 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LFM56_12150 GDSL-type esterase/lipase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D LFM56_11365 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D LFM56_09885 fabI; enoyl-ACP reductase FabI K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D LFM56_04045 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_11265 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LFM56_07625 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_11155 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_12275 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_01850 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D LFM56_02155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LFM56_07640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LFM56_08430 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cira01008]
D LFM56_12430 type III polyketide synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D LFM56_12435 isoprenylcysteine carboxyl methyltransferase family protein K16168 bpsB; methyltransferase
D LFM56_09655 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:cira01006]
D LFM56_07670 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D LFM56_03690 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D LFM56_13605 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D LFM56_07100 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LFM56_03695 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D LFM56_10520 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LFM56_04375 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D LFM56_08390 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:cira01007]
D LFM56_12215 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LFM56_10070 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LFM56_13340 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LFM56_15135 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LFM56_13050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LFM56_00275 class I tRNA ligase family protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LFM56_14065 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LFM56_10995 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LFM56_11135 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LFM56_06910 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LFM56_15265 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LFM56_15850 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LFM56_09200 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LFM56_09215 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LFM56_07130 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D LFM56_01945 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LFM56_10755 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LFM56_09330 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LFM56_09160 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LFM56_10170 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LFM56_10165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LFM56_04625 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LFM56_14775 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LFM56_13145 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D LFM56_00935 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_10265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LFM56_17690 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LFM56_14410 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D LFM56_10110 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LFM56_00295 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D LFM56_00805 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LFM56_09350 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_12390 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LFM56_14450 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LFM56_06280 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cira00194]
D LFM56_12910 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LFM56_17985 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LFM56_12915 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LFM56_12920 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LFM56_12925 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LFM56_12930 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LFM56_12935 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LFM56_12940 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LFM56_12945 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cira03000]
D LFM56_00535 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D LFM56_05120 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D LFM56_01015 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LFM56_02975 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LFM56_02995 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LFM56_03135 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LFM56_11785 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LFM56_12560 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LFM56_16165 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LFM56_17325 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LFM56_00350 LacI family transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator
D LFM56_03020 LacI family DNA-binding transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator
D LFM56_17950 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D LFM56_08810 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D LFM56_16745 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D LFM56_17280 LuxR C-terminal-related transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D LFM56_05770 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LFM56_06765 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D LFM56_16440 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D LFM56_05065 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D LFM56_05805 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LFM56_10200 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D LFM56_02480 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LFM56_10610 helix-turn-helix domain-containing protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D LFM56_02165 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D LFM56_05035 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D LFM56_13810 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D LFM56_14445 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D LFM56_06895 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D LFM56_13170 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LFM56_09760 helix-turn-helix domain-containing protein K20388 cylR2; HTH-type transcriptional regulator, cytolysin regulator
D LFM56_04325 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D LFM56_16020 helix-turn-helix domain-containing protein K07729 K07729; putative transcriptional regulator
D LFM56_17450 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D LFM56_05795 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LFM56_02465 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LFM56_05060 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LFM56_06070 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LFM56_06325 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LFM56_05670 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LFM56_00785 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D LFM56_00045 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LFM56_15180 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D LFM56_10100 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D LFM56_07000 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D LFM56_15510 PspC domain-containing protein K03973 pspC; phage shock protein C
D LFM56_15680 MarR family transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D LFM56_09030 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D LFM56_16815 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D LFM56_12355 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D LFM56_14585 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D LFM56_10300 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D LFM56_10465 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D LFM56_10385 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cira03021]
D LFM56_14680 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D LFM56_04875 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LFM56_04695 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LFM56_04700 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LFM56_08980 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LFM56_07690 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D LFM56_00405 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_01430 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_06840 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_07990 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_12180 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_16905 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_16940 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_13360 sigE; RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_16305 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_00450 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_16635 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_15495 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LFM56_10830 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LFM56_14995 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LFM56_10740 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D LFM56_09040 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D LFM56_04640 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LFM56_03265 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D LFM56_04165 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D LFM56_17715 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D LFM56_14585 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D LFM56_10300 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D LFM56_13635 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D LFM56_12995 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cira03019]
D LFM56_06675 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LFM56_06630 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LFM56_10640 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D LFM56_10570 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D LFM56_11440 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LFM56_08725 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LFM56_03170 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_10270 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_11965 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_13830 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LFM56_10700 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LFM56_12995 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LFM56_16455 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LFM56_15025 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LFM56_04015 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LFM56_00090 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D LFM56_08320 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D LFM56_08870 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D LFM56_17635 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cira03011]
D LFM56_08250 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LFM56_10820 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LFM56_04770 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LFM56_09175 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LFM56_04825 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LFM56_00130 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LFM56_04720 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LFM56_04810 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LFM56_04925 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LFM56_04735 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LFM56_04870 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LFM56_04715 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LFM56_04865 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LFM56_04805 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LFM56_17220 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LFM56_10705 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LFM56_10890 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LFM56_00140 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LFM56_04760 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LFM56_06945 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LFM56_04650 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LFM56_04755 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LFM56_04745 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LFM56_04800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LFM56_04815 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LFM56_00145 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LFM56_04675 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LFM56_04645 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LFM56_04680 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LFM56_04920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LFM56_04790 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LFM56_04835 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LFM56_04775 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LFM56_04880 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LFM56_04820 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LFM56_10870 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LFM56_10185 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LFM56_06680 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LFM56_04765 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LFM56_04750 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LFM56_04795 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LFM56_06685 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LFM56_06575 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LFM56_17230 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LFM56_04780 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LFM56_04830 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LFM56_12975 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LFM56_17215 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LFM56_06625 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LFM56_17205 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LFM56_04555 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LFM56_17225 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LFM56_00010 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LFM56_10190 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LFM56_04860 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LFM56_17210 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LFM56_13945 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D LFM56_12785 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LFM56_10055 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LFM56_12795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LFM56_10065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LFM56_10060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LFM56_12790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cira03009]
D LFM56_06630 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LFM56_11440 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LFM56_07035 era; GTPase Era K03595 era; GTPase
D LFM56_06690 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D LFM56_14585 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D LFM56_10300 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D LFM56_10740 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D LFM56_09040 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D LFM56_04640 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LFM56_14045 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D LFM56_08955 rRNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D LFM56_00885 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D LFM56_10505 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D LFM56_06600 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D LFM56_07010 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D LFM56_00035 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LFM56_10380 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D LFM56_14080 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LFM56_10035 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D LFM56_15130 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D LFM56_10795 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D LFM56_11780 rlmC; 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D LFM56_00315 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D LFM56_08415 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LFM56_10290 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LFM56_04995 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D LFM56_14135 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D LFM56_10880 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D LFM56_06675 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LFM56_09155 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D LFM56_08725 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LFM56_03590 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LFM56_12195 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LFM56_08435 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D LFM56_10500 hflX; GTPase HflX K03665 hflX; GTPase
D LFM56_12960 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LFM56_09240 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LFM56_10725 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D LFM56_10745 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D LFM56_10280 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D LFM56_06720 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D LFM56_07025 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D LFM56_13495 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D LFM56_06620 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cira03016]
D LFM56_12215 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LFM56_10755 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LFM56_10995 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LFM56_06910 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LFM56_00275 class I tRNA ligase family protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LFM56_14065 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LFM56_13050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LFM56_15265 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LFM56_15850 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LFM56_09200 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LFM56_09160 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LFM56_07130 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D LFM56_09330 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LFM56_01945 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LFM56_15135 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LFM56_11135 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LFM56_09215 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LFM56_10170 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LFM56_10165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LFM56_10070 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LFM56_13340 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LFM56_02550 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LFM56_05995 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LFM56_08005 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D LFM56_15805 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LFM56_04895 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LFM56_10720 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D LFM56_07555 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_12695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_12960 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LFM56_10520 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LFM56_00015 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LFM56_07345 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D LFM56_11540 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D LFM56_09680 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D LFM56_10175 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D LFM56_12300 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D LFM56_17610 YbaK/EbsC family protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D LFM56_16255 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D LFM56_10545 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D LFM56_10875 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LFM56_03010 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LFM56_10180 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D LFM56_00315 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D LFM56_12690 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LFM56_03935 adhesin K13628 iscA; iron-sulfur cluster assembly protein
D LFM56_02520 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D LFM56_15340 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LFM56_04990 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LFM56_05010 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LFM56_04985 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LFM56_10700 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LFM56_14270 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:cira03012]
D LFM56_10730 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LFM56_10815 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D LFM56_04730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LFM56_01480 elongation factor G K02355 fusA; elongation factor G
D LFM56_04725 fusA; elongation factor G K02355 fusA; elongation factor G
D LFM56_12970 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D LFM56_10805 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D LFM56_12965 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LFM56_13835 putative protein N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LFM56_13940 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D LFM56_04855 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LFM56_09045 efp; elongation factor P K02356 efp; elongation factor P
D LFM56_12000 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cira03110]
D LFM56_15725 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D LFM56_02690 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D LFM56_11175 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D LFM56_03060 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D LFM56_16455 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LFM56_15025 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LFM56_07005 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LFM56_16445 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D LFM56_16450 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D LFM56_17730 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D LFM56_11655 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D LFM56_05055 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D LFM56_11495 co-chaperone GroES K04078 groES; chaperonin GroES
D LFM56_15330 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LFM56_12945 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LFM56_14090 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D LFM56_18090 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LFM56_09225 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D LFM56_00060 trxA; thioredoxin K03671 TXN; thioredoxin
D LFM56_11515 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:cira04131]
D LFM56_10940 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LFM56_17540 flotillin family protein K07192 FLOT; flotillin
D LFM56_08335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LFM56_15225 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LFM56_08135 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LFM56_03060 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D LFM56_02035 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:cira04121]
D LFM56_08025 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cira03051]
D LFM56_03060 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D LFM56_08035 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D LFM56_08030 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D LFM56_08010 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D LFM56_08040 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D LFM56_08900 WYL domain-containing protein K13572 pafB; proteasome accessory factor B
D LFM56_08895 WYL domain-containing protein K13573 pafC; proteasome accessory factor C
D LFM56_08015 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cira03032]
D LFM56_12270 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LFM56_08690 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LFM56_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LFM56_00165 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LFM56_07190 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LFM56_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_11405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_10285 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LFM56_18190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LFM56_06930 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LFM56_15585 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LFM56_07620 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LFM56_02290 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LFM56_07330 histidine phosphatase family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D LFM56_10860 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LFM56_08205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LFM56_12620 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LFM56_09855 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LFM56_18165 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LFM56_07720 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LFM56_18170 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LFM56_11370 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LFM56_15605 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cira03036]
D LFM56_06630 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LFM56_17540 flotillin family protein K07192 FLOT; flotillin
D LFM56_15255 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D LFM56_08690 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LFM56_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LFM56_08665 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D LFM56_00535 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D LFM56_10935 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D LFM56_08405 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D LFM56_08410 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D LFM56_11995 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D LFM56_10370 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LFM56_06080 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LFM56_10630 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LFM56_12500 FHA domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LFM56_15795 FHA domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LFM56_10330 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D LFM56_10345 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LFM56_11990 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D LFM56_10325 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LFM56_10315 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D LFM56_00040 ParA family protein K03496 parA; chromosome partitioning protein
D LFM56_08400 AAA family ATPase K03496 parA; chromosome partitioning protein
D LFM56_00045 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LFM56_00035 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LFM56_10835 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D LFM56_08395 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D LFM56_05580 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LFM56_08330 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cira03400]
D LFM56_05960 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D LFM56_08630 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D LFM56_12570 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LFM56_15050 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LFM56_10075 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D LFM56_15670 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LFM56_02490 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LFM56_14680 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D LFM56_05790 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LFM56_06830 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LFM56_13215 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LFM56_16070 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LFM56_17735 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LFM56_09805 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LFM56_01455 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LFM56_05945 AlkA protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LFM56_17670 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LFM56_06635 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LFM56_10760 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LFM56_02105 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D LFM56_10605 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D LFM56_05515 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LFM56_15705 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LFM56_15085 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D LFM56_12620 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LFM56_08205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LFM56_08305 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D LFM56_08265 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D LFM56_08315 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D LFM56_05325 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_05645 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_05665 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LFM56_04695 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LFM56_04700 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LFM56_04875 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LFM56_08980 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LFM56_13865 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LFM56_13520 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LFM56_13525 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LFM56_10285 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LFM56_18190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LFM56_06930 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LFM56_15585 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LFM56_07620 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LFM56_02290 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LFM56_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_11405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_05825 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D LFM56_05830 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D LFM56_05820 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LFM56_10580 recA; recombinase RecA K03553 recA; recombination protein RecA
D LFM56_09270 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LFM56_09265 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LFM56_09275 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LFM56_08965 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LFM56_17595 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D LFM56_17600 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D LFM56_15655 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D LFM56_18180 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D LFM56_06585 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LFM56_07095 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LFM56_02320 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D LFM56_10025 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D LFM56_01070 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D LFM56_06905 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D LFM56_08680 Ku protein K10979 ku; DNA end-binding protein Ku
D LFM56_08675 ligD; non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D LFM56_14220 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D LFM56_09855 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LFM56_18165 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LFM56_07720 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LFM56_18170 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LFM56_11370 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LFM56_15605 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LFM56_08690 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LFM56_03170 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_10270 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_11965 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LFM56_07890 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LFM56_17875 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LFM56_10475 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D LFM56_07805 DNA polymerase Y family protein K14161 imuB; protein ImuB
D LFM56_07810 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D LFM56_10575 RecX family transcriptional regulator K03565 recX; regulatory protein
D LFM56_10600 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D LFM56_04010 NUDIX domain-containing protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D LFM56_09995 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D LFM56_16370 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LFM56_16365 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cira03029]
D LFM56_10730 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LFM56_10815 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D LFM56_04730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LFM56_01480 elongation factor G K02355 fusA; elongation factor G
D LFM56_04725 fusA; elongation factor G K02355 fusA; elongation factor G
D LFM56_07035 era; GTPase Era K03595 era; GTPase
D LFM56_10070 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LFM56_06910 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LFM56_09200 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LFM56_07130 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D LFM56_13050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LFM56_12590 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LFM56_12585 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LFM56_12595 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LFM56_03305 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D LFM56_00135 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_11405 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LFM56_16455 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LFM56_16450 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D LFM56_15025 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LFM56_05055 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D LFM56_11495 co-chaperone GroES K04078 groES; chaperonin GroES
D LFM56_07005 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LFM56_16445 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D LFM56_07555 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_12695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_05580 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LFM56_08390 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LFM56_09990 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LFM56_00025 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_05750 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_03060 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cira02000]
D LFM56_07750 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D LFM56_07755 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D LFM56_00230 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LFM56_08065 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LFM56_11040 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LFM56_11045 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LFM56_00225 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LFM56_08060 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LFM56_17070 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LFM56_06655 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D LFM56_01775 ABC transporter ATP-binding protein/permease K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D LFM56_11530 ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D LFM56_14015 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D LFM56_01780 ABC transporter ATP-binding protein/permease K02021 ABC.MR; putative ABC transport system ATP-binding protein
D LFM56_09545 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D LFM56_09550 ABC transporter permease K02018 modB; molybdate transport system permease protein
D LFM56_09555 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D LFM56_11255 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D LFM56_11260 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D LFM56_11250 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LFM56_16980 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D LFM56_16975 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D LFM56_16970 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D LFM56_00580 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D LFM56_00595 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D LFM56_00590 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D LFM56_00585 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D LFM56_06375 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D LFM56_06380 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D LFM56_11470 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D LFM56_11460 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D LFM56_11465 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D LFM56_11455 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D LFM56_03110 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D LFM56_03105 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LFM56_03100 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LFM56_08600 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D LFM56_08605 ABC transporter permease subunit K10109 malF; maltose/maltodextrin transport system permease protein
D LFM56_13545 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LFM56_15120 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LFM56_07165 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D LFM56_07170 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D LFM56_07175 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D LFM56_08610 ABC transporter permease subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D LFM56_16185 carbohydrate ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D LFM56_01020 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D LFM56_12555 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D LFM56_01025 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LFM56_12550 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LFM56_12755 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LFM56_01030 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LFM56_12545 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LFM56_12760 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LFM56_01955 ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D LFM56_01960 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D LFM56_01965 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D LFM56_13560 extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D LFM56_13555 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D LFM56_13550 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D LFM56_06055 extracellular solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D LFM56_06050 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D LFM56_06045 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D LFM56_11620 extracellular solute-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D LFM56_11615 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D LFM56_11610 carbohydrate ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D LFM56_03035 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D LFM56_12335 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D LFM56_12870 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D LFM56_16135 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D LFM56_03025 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D LFM56_12340 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D LFM56_12865 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D LFM56_16130 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D LFM56_03030 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D LFM56_12345 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D LFM56_12860 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D LFM56_16125 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D LFM56_05420 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D LFM56_05445 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D LFM56_05400 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D LFM56_05425 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D LFM56_14815 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D LFM56_05410 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D LFM56_05435 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D LFM56_05405 ATP-binding cassette domain-containing protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LFM56_05430 ATP-binding cassette domain-containing protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LFM56_01145 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D LFM56_01140 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D LFM56_01150 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D LFM56_02765 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D LFM56_03145 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D LFM56_02775 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D LFM56_02780 sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein
D LFM56_03155 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D LFM56_03160 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D LFM56_02770 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D LFM56_03150 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D LFM56_00485 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D LFM56_00475 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D LFM56_00480 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D LFM56_03550 extracellular solute-binding protein K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D LFM56_03540 sugar ABC transporter permease K17235 araP; arabinooligosaccharide transport system permease protein
D LFM56_03545 carbohydrate ABC transporter permease K17236 araQ; arabinooligosaccharide transport system permease protein
D LFM56_04300 sugar ABC transporter substrate-binding protein K25062 abnE; arabinooligosaccharide transport system substrate-binding protein
D LFM56_04295 sugar ABC transporter permease K25063 abnF; arabinooligosaccharide transport system permease protein
D LFM56_04290 carbohydrate ABC transporter permease K25064 abnJ; arabinooligosaccharide transport system permease protein
D LFM56_12665 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D LFM56_13295 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D LFM56_12655 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LFM56_13285 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LFM56_12650 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LFM56_13280 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LFM56_12660 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LFM56_13290 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LFM56_00355 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D LFM56_02915 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D LFM56_09380 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D LFM56_11790 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D LFM56_16190 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D LFM56_17805 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D LFM56_00360 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D LFM56_02905 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D LFM56_09390 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D LFM56_11795 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D LFM56_16180 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D LFM56_17800 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D LFM56_00365 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D LFM56_02910 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D LFM56_09385 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D LFM56_11800 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D LFM56_17795 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D LFM56_15205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LFM56_15200 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D LFM56_15195 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D LFM56_15190 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LFM56_10555 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D LFM56_10560 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D LFM56_10565 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D LFM56_10550 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D LFM56_12250 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D LFM56_12245 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D LFM56_12240 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D LFM56_08170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LFM56_08190 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LFM56_08185 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LFM56_08180 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LFM56_08175 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LFM56_02055 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D LFM56_02060 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D LFM56_02065 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D LFM56_14770 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D LFM56_14765 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D LFM56_14760 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D LFM56_14755 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D LFM56_14750 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D LFM56_02665 glutamate ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LFM56_03495 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LFM56_05890 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LFM56_11140 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LFM56_03485 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D LFM56_11145 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D LFM56_11150 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D LFM56_03490 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D LFM56_08240 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D LFM56_13485 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D LFM56_13480 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D LFM56_13475 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D LFM56_03455 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LFM56_08225 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LFM56_13460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LFM56_17330 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LFM56_03460 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LFM56_08230 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LFM56_17335 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LFM56_03465 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LFM56_08235 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LFM56_17340 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LFM56_03470 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LFM56_17345 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LFM56_13465 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LFM56_05160 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D LFM56_05155 iron ABC transporter permease K23228 fhuB; ferric hydroxamate transport system permease protein
D LFM56_05165 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D LFM56_13040 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D LFM56_13035 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D LFM56_13030 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D LFM56_01790 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D LFM56_05095 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D LFM56_01805 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D LFM56_05090 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D LFM56_14250 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D LFM56_01810 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D LFM56_05085 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D LFM56_14245 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D LFM56_05100 iron-siderophore ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LFM56_11070 putative F420-0 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LFM56_14260 iron-siderophore ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LFM56_01800 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D LFM56_11075 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D LFM56_14255 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D LFM56_07730 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D LFM56_11080 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D LFM56_17510 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D LFM56_17520 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D LFM56_17515 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D LFM56_07125 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D LFM56_07115 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D LFM56_07120 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D LFM56_09915 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D LFM56_09925 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D LFM56_09920 energy-coupling factor ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D LFM56_06160 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D LFM56_06165 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D LFM56_14605 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D LFM56_14610 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D LFM56_16420 ABC transporter permease K18233 oleC5; oleandomycin transport system permease protein
D LFM56_16425 ATP-binding cassette domain-containing protein K18232 oleC4; oleandomycin transport system ATP-binding protein
D LFM56_15640 anibiotic ABC transporter K25149 narB; polyether ionophore transport system permease protein
D LFM56_15645 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D LFM56_11990 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D LFM56_11995 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D LFM56_00750 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_01345 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_02330 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_02420 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_02735 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_04225 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_04615 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_06775 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_08800 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_09985 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_11735 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_13500 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_13740 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_14020 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_15865 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_16575 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_16580 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_17445 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LFM56_00745 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_01320 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_01350 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_02400 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_02415 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_02730 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_04220 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_04620 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_06590 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_06780 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_08805 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_09980 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_11730 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_13505 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_13735 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_13975 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_14025 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_15870 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_16585 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_17440 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_02335 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LFM56_01405 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LFM56_01475 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LFM56_03810 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LFM56_05520 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LFM56_05540 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LFM56_06085 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LFM56_08490 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LFM56_13575 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LFM56_01410 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_01470 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_02080 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_02275 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_05525 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_05545 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_06090 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_08495 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_13585 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LFM56_09950 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D LFM56_01615 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D LFM56_07760 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D LFM56_00985 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D LFM56_16740 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D LFM56_00160 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D LFM56_03990 sugar porter family MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D LFM56_01855 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D LFM56_14010 MFS transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D LFM56_16735 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D LFM56_09450 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LFM56_09475 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LFM56_14225 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LFM56_13150 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LFM56_06900 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D LFM56_15555 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D LFM56_15415 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D LFM56_11695 DHA2 family efflux MFS transporter permease subunit K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D LFM56_15875 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D LFM56_02035 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D LFM56_01380 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D LFM56_05145 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LFM56_11355 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LFM56_05140 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D LFM56_11345 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LFM56_11350 PTS glucose/sucrose transporter subunit IIB K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D LFM56_05130 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D LFM56_05135 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LFM56_05115 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D LFM56_05110 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D LFM56_10950 dhaM; PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D LFM56_05375 aquaporin K06188 aqpZ; aquaporin Z
D LFM56_15690 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D LFM56_16790 ion transporter K08714 VGSC; voltage-gated sodium channel
D LFM56_10920 ammonium transporter K03320 amt; ammonium transporter, Amt family
D LFM56_02570 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D LFM56_03790 DUF3520 domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D LFM56_04055 formate/nitrite transporter family protein K02598 nirC; nitrite transporter
D LFM56_14165 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D LFM56_12280 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D LFM56_14900 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D LFM56_14895 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D LFM56_07965 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D LFM56_16840 CrcB family protein K06199 crcB; fluoride exporter
D LFM56_16845 CrcB family protein K06199 crcB; fluoride exporter
D LFM56_05900 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_05905 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_07030 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_12105 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_12110 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_13800 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_02295 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D LFM56_07085 PQQ-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D LFM56_01175 amino acid permease K16237 aroP; aromatic amino acid permease
D LFM56_00290 hypothetical protein K16263 yjeH; amino acid efflux transporter
D LFM56_00765 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D LFM56_17075 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D LFM56_15165 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D LFM56_05480 DMT family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D LFM56_00625 DMT family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D LFM56_01770 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D LFM56_01970 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D LFM56_04515 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D LFM56_00615 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D LFM56_13450 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D LFM56_08215 cation acetate symporter K14393 actP; cation/acetate symporter
D LFM56_02500 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D LFM56_05990 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D LFM56_01815 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D LFM56_04255 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D LFM56_04250 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D LFM56_09780 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D LFM56_09785 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D LFM56_14495 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D LFM56_02050 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D LFM56_07790 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D LFM56_14180 arsenic transporter K03893 arsB; arsenical pump membrane protein
D LFM56_17015 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D LFM56_17010 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D LFM56_17005 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D LFM56_17000 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D LFM56_16995 pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D LFM56_16990 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D LFM56_00075 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LFM56_02945 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D LFM56_00540 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D LFM56_10665 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D LFM56_10670 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D LFM56_13645 AI-2E family transporter K20469 K20469; putative heme transporter
D LFM56_01550 VIT1/CCC1 family protein K22736 VIT; vacuolar iron transporter family protein
D LFM56_12295 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D LFM56_10345 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LFM56_13220 FTR1 family protein K07243 FTR; high-affinity iron transporter
D LFM56_13225 EfeM/EfeO family lipoprotein K07224 efeO; iron uptake system component EfeO
D LFM56_13230 efeB; deferrochelatase/peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D LFM56_04170 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D LFM56_04350 cytochrome C biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D LFM56_09480 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_09485 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_09495 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LFM56_13905 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D LFM56_14540 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D LFM56_08925 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D LFM56_15440 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D LFM56_15435 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D LFM56_00970 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cira02044]
D LFM56_09090 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LFM56_09110 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D LFM56_09140 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D LFM56_09130 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D LFM56_09085 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D LFM56_09080 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D LFM56_09135 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D LFM56_12170 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D LFM56_05210 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D LFM56_05215 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D LFM56_04085 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LFM56_05225 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LFM56_12090 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LFM56_04090 type II secretion system F family protein K12510 tadB; tight adherence protein B
D LFM56_05230 type II secretion system F family protein K12510 tadB; tight adherence protein B
D LFM56_12085 type II secretion system F family protein K12510 tadB; tight adherence protein B
D LFM56_05235 type II secretion system F family protein K12511 tadC; tight adherence protein C
D LFM56_12080 type II secretion system F family protein K12511 tadC; tight adherence protein C
D LFM56_10310 YggT family protein K02221 yggT; YggT family protein
D LFM56_06920 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D LFM56_06925 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D LFM56_14850 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D LFM56_14855 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D LFM56_14950 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LFM56_14935 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LFM56_14880 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LFM56_14870 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D LFM56_14865 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LFM56_14860 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D LFM56_06455 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LFM56_09255 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LFM56_04635 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LFM56_09250 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LFM56_08350 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LFM56_04840 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LFM56_10905 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LFM56_12990 hypothetical protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LFM56_10925 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LFM56_09260 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LFM56_00025 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_05750 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LFM56_08885 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D LFM56_13345 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D LFM56_08880 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cira02042]
D LFM56_05900 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_05905 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_07030 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_12105 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_12110 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_13800 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LFM56_05725 hemolysin III family protein K11068 hlyIII; hemolysin III
D LFM56_13610 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cira02022]
D LFM56_02310 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D LFM56_15215 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D LFM56_15210 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D LFM56_01625 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LFM56_01620 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LFM56_06430 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D LFM56_06425 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D LFM56_03725 HAMP domain-containing histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D LFM56_03730 response regulator transcription factor K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D LFM56_14710 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LFM56_15625 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LFM56_14705 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LFM56_15620 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LFM56_05020 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LFM56_05025 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D LFM56_06650 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D LFM56_06645 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D LFM56_14830 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LFM56_14785 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_14795 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_17725 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_14805 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LFM56_00695 SpoIIE family protein phosphatase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D LFM56_06065 PAS domain-containing sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D LFM56_08165 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:cira02035]
D LFM56_14830 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LFM56_14825 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LFM56_14800 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LFM56_14805 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LFM56_14785 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_14795 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_17725 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LFM56_07405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_10085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_14810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_14820 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_15840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_17320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_17415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LFM56_14935 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LFM56_14870 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D LFM56_14865 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LFM56_14860 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D LFM56_14850 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D LFM56_14855 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D LFM56_14945 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LFM56_14885 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LFM56_14880 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LFM56_14950 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LFM56_14890 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D LFM56_14955 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D LFM56_14965 flagellar basal body protein K02387 flgB; flagellar basal-body rod protein FlgB
D LFM56_14960 flagellar basal body protein K02388 flgC; flagellar basal-body rod protein FlgC
D LFM56_14920 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D LFM56_14915 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D LFM56_15005 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D LFM56_15010 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D LFM56_14985 flagellin K02406 fliC; flagellin
D LFM56_14980 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D LFM56_14975 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D LFM56_10830 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LFM56_14995 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LFM56_14900 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D LFM56_14895 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D LFM56_12250 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D LFM56_15015 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D LFM56_14905 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D LFM56_09135 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D LFM56_12170 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D LFM56_09110 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D LFM56_09140 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D LFM56_09130 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D LFM56_09090 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LFM56_09080 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D LFM56_09085 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D LFM56_05210 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D LFM56_05215 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D LFM56_04085 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LFM56_05225 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LFM56_12090 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cira04812]
D LFM56_10325 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LFM56_00040 ParA family protein K03496 parA; chromosome partitioning protein
D LFM56_08400 AAA family ATPase K03496 parA; chromosome partitioning protein
D LFM56_00045 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cira04147]
D LFM56_03060 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D LFM56_13830 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LFM56_08335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LFM56_08340 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LFM56_08135 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LFM56_18090 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LFM56_17540 flotillin family protein K07192 FLOT; flotillin
D LFM56_15025 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LFM56_16455 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LFM56_11645 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LFM56_05075 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LFM56_05080 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LFM56_04730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LFM56_05995 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LFM56_10485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LFM56_01615 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D LFM56_07625 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_11155 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_12275 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LFM56_03400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LFM56_04845 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LFM56_09245 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D LFM56_10090 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LFM56_10095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LFM56_05560 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LFM56_12780 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D LFM56_15695 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LFM56_07395 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_07410 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LFM56_00810 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LFM56_13490 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LFM56_10455 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LFM56_05360 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LFM56_07470 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LFM56_01875 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D LFM56_12705 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D LFM56_06035 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D LFM56_01400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LFM56_08375 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LFM56_08345 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LFM56_15225 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cira02048]
D LFM56_01070 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D LFM56_01065 cas2e; type I-E CRISPR-associated endoribonuclease Cas2e K09951 cas2; CRISPR-associated protein Cas2
D LFM56_01095 casA; type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA
D LFM56_01100 cas3; CRISPR-associated helicase Cas3' K19123 casA; CRISPR system Cascade subunit CasA
D LFM56_01090 casB; type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D LFM56_01085 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D LFM56_01080 cas5e; type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D LFM56_01075 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D LFM56_01290 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LFM56_01285 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LFM56_01280 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LFM56_01055 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D LFM56_17525 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D LFM56_15510 PspC domain-containing protein K03973 pspC; phage shock protein C
D LFM56_14270 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D LFM56_01125 hypothetical protein K21495 fitA; antitoxin FitA
D LFM56_10325 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LFM56_12215 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LFM56_07555 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LFM56_12695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cira01504]
D LFM56_12285 aminoglycoside 3'-phosphotransferase K00897 aphA; kanamycin kinase [EC:2.7.1.95]
D LFM56_16420 ABC transporter permease K18233 oleC5; oleandomycin transport system permease protein
D LFM56_11530 ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D LFM56_16425 ATP-binding cassette domain-containing protein K18232 oleC4; oleandomycin transport system ATP-binding protein
D LFM56_15875 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D LFM56_05650 phosphotransferase K06979 mph; macrolide phosphotransferase
D LFM56_01690 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D LFM56_15415 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D LFM56_00555 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03585 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03735 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_12100 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_14910 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_15535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LFM56_03725 HAMP domain-containing histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D LFM56_03730 response regulator transcription factor K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D LFM56_15950 dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LFM56_08810 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cira03100]
D LFM56_14125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LFM56_18145 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LFM56_06730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LFM56_15995 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LFM56_14320 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LFM56_11420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LFM56_13060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LFM56_07210 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LFM56_03655 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LFM56_09365 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LFM56_06495 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LFM56_13995 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LFM56_03660 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LFM56_06500 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LFM56_17245 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LFM56_09360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LFM56_11195 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LFM56_11445 tRNA-His K14226 tRNA-His; tRNA His
D LFM56_18155 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LFM56_18020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_07880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_08160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_13790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_11505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LFM56_03770 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LFM56_11485 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LFM56_04550 tRNA-Met K14230 tRNA-Met; tRNA Met
D LFM56_05720 tRNA-Met K14230 tRNA-Met; tRNA Met
D LFM56_07240 tRNA-Ile K14230 tRNA-Met; tRNA Met
D LFM56_03650 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LFM56_11210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LFM56_08455 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LFM56_02450 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LFM56_16035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LFM56_02025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LFM56_02245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LFM56_16240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LFM56_15575 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LFM56_15090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LFM56_04545 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LFM56_04630 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LFM56_04535 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LFM56_09370 tRNA-Val K14237 tRNA-Val; tRNA Val
D LFM56_07310 tRNA-Val K14237 tRNA-Val; tRNA Val
D LFM56_09340 tRNA-Val K14237 tRNA-Val; tRNA Val
D LFM56_12795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LFM56_10065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LFM56_10060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LFM56_12790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LFM56_12785 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LFM56_10055 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LFM56_02270 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D LFM56_07345 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D LFM56_11935 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D LFM56_03915 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D LFM56_03090 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D LFM56_15150 FAD-binding protein K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D LFM56_11125 TIGR03557 family F420-dependent LLM class oxidoreductase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D LFM56_17535 nitroreductase family deazaflavin-dependent oxidoreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D LFM56_04425 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D LFM56_00385 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D LFM56_06815 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D LFM56_01880 FAD-dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D LFM56_13235 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LFM56_10130 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D LFM56_13655 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D LFM56_03970 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D LFM56_06870 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D LFM56_08545 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D LFM56_03885 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D LFM56_11500 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LFM56_01760 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LFM56_15445 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LFM56_07305 peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D LFM56_16115 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D LFM56_00285 SidA/IucD/PvdA family monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D LFM56_17035 SidA/IucD/PvdA family monooxygenase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D LFM56_16650 lytic polysaccharide monooxygenase K22033 K22033; lytic cellulose monooxygenase (C4-dehydrogenating) [EC:1.14.99.56]
D LFM56_17160 lytic polysaccharide monooxygenase K22033 K22033; lytic cellulose monooxygenase (C4-dehydrogenating) [EC:1.14.99.56]
D LFM56_04520 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D LFM56_05660 mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D LFM56_01755 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D LFM56_04140 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D LFM56_09700 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D LFM56_02830 sugar O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D LFM56_16605 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D LFM56_16750 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D LFM56_04020 mshD; mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D LFM56_08860 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D LFM56_14415 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D LFM56_15230 glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D LFM56_08120 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D LFM56_13685 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D LFM56_17085 dihydroxyacetone kinase subunit DhaK K20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210]
D LFM56_06580 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D LFM56_07400 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D LFM56_15660 disA; DNA integrity scanning diadenylate cyclase DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D LFM56_02610 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LFM56_02095 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D LFM56_06725 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D LFM56_05610 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D LFM56_09880 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D LFM56_14060 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LFM56_01195 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D LFM56_12900 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D LFM56_00320 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D LFM56_08540 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D LFM56_11820 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D LFM56_13840 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D LFM56_14290 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D LFM56_14295 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D LFM56_08615 glycosyl hydrolase 53 family protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D LFM56_04285 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D LFM56_04310 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D LFM56_03125 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D LFM56_08650 cellulose binding domain-containing protein K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155]
D LFM56_01650 family 31 glucosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D LFM56_12845 yicI; alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D LFM56_04935 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LFM56_07255 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LFM56_13445 PIG-L family deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D LFM56_13625 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D LFM56_13615 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D LFM56_05875 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D LFM56_00905 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LFM56_02590 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LFM56_06405 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LFM56_07065 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LFM56_10390 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LFM56_12490 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LFM56_11680 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D LFM56_04970 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D LFM56_13695 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D LFM56_01980 AGE family epimerase/isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D LFM56_09660 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D LFM56_07970 mshC; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D LFM56_11025 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D LFM56_04260 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D LFM56_12540 glycoside hydrolase family 3 C-terminal domain-containing protein K17641 bxlA; beta-xylosidase
D LFM56_17105 glycoside hydrolase family 3 C-terminal domain-containing protein K17641 bxlA; beta-xylosidase
C 99982 Energy metabolism
D LFM56_09940 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D LFM56_01870 hypothetical protein K03521 fixA; electron transfer flavoprotein beta subunit
D LFM56_12710 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D LFM56_01885 4Fe-4S dicluster domain-containing protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D LFM56_06915 DegV family EDD domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D LFM56_16375 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D LFM56_17485 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D LFM56_01190 EI24 domain-containing protein K06203 cysZ; CysZ protein
D LFM56_02820 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D LFM56_12360 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D LFM56_14050 transglycosylase family protein K21688 rpfB; resuscitation-promoting factor RpfB
D LFM56_14055 ubiquitin-like domain-containing protein K21688 rpfB; resuscitation-promoting factor RpfB
D LFM56_06295 glycosyltransferase family 2 protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D LFM56_14120 alpha/beta fold hydrolase K03932 lpqC; polyhydroxybutyrate depolymerase
D LFM56_02710 lanKC; class III lanthionine synthetase LanKC K24914 ramC; probable SapB synthase
C 99999 Others
D LFM56_01695 esterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D LFM56_02170 cold-shock protein K03704 cspA; cold shock protein
D LFM56_10425 cold-shock protein K03704 cspA; cold shock protein
D LFM56_14580 cold shock domain-containing protein K03704 cspA; cold shock protein
D LFM56_15035 cold-shock protein K03704 cspA; cold shock protein
D LFM56_16590 cold shock domain-containing protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D LFM56_11565 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D LFM56_11190 tig; trigger factor K03545 tig; trigger factor
D LFM56_11980 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D LFM56_16380 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D LFM56_10845 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D LFM56_04355 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D LFM56_13510 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D LFM56_10850 YraN family protein K07460 yraN; putative endonuclease
D LFM56_07995 PD-(D/E)XK nuclease family protein K07465 K07465; putative RecB family exonuclease
D LFM56_10840 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D LFM56_09180 replication-associated recombination protein A K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D LFM56_14695 PspA/IM30 family protein K03969 pspA; phage shock protein A
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D LFM56_17550 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LFM56_17890 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LFM56_12565 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LFM56_04005 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D LFM56_10540 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D LFM56_00030 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein
D LFM56_06245 glycosyltransferase family protein K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
C 99993 Cell motility
C 99995 Signaling proteins
D LFM56_13455 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D LFM56_07020 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D LFM56_13600 PhoH family protein K07175 phoH2; PhoH-like ATPase
D LFM56_04530 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D LFM56_06300 DUF2304 domain-containing protein K09153 K09153; small membrane protein
C 99994 Others
D LFM56_15220 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D LFM56_08570 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D LFM56_08685 PHP domain-containing protein K04477 ycdX; putative hydrolase
D LFM56_11850 PHP domain-containing protein K04477 ycdX; putative hydrolase
D LFM56_04125 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D LFM56_11360 globin K06886 glbN; hemoglobin
D LFM56_02790 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D LFM56_07445 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D LFM56_09185 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D LFM56_12210 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D LFM56_09965 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D LFM56_09960 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D LFM56_02835 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D LFM56_13330 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D LFM56_01585 VOC family protein K04750 phnB; PhnB protein
D LFM56_17420 VOC family protein K04750 phnB; PhnB protein
D LFM56_03190 LemA family protein K03744 lemA; LemA protein
D LFM56_03235 VTT domain-containing protein K03975 dedA; membrane-associated protein
D LFM56_01710 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D LFM56_02785 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D LFM56_12365 DUF202 domain-containing protein K00389 yidH; putative membrane protein
D LFM56_12370 DUF202 domain-containing protein K00389 yidH; putative membrane protein
D LFM56_00930 phage holin family protein K08972 K08972; putative membrane protein
D LFM56_03240 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D LFM56_15300 PH domain-containing protein K08981 K08981; putative membrane protein
D LFM56_17945 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D LFM56_17970 YchJ family protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D LFM56_06005 NYN domain-containing protein K06860 K06860; putative heme uptake system protein
D LFM56_02615 hypothetical protein K06870 K06870; uncharacterized protein
D LFM56_07825 ATP-binding protein K06923 K06923; uncharacterized protein
D LFM56_08730 CoA-binding protein K06929 K06929; uncharacterized protein
D LFM56_11275 CoA-binding protein K06929 K06929; uncharacterized protein
D LFM56_02005 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D LFM56_10885 RNA-binding protein K06960 K06960; uncharacterized protein
D LFM56_01905 N-acetyltransferase K06975 K06975; uncharacterized protein
D LFM56_10765 DUF4081 domain-containing protein K06976 K06976; uncharacterized protein
D LFM56_00505 VOC family protein K06996 K06996; uncharacterized protein
D LFM56_15755 VOC family protein K06996 K06996; uncharacterized protein
D LFM56_10160 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D LFM56_02595 dienelactone hydrolase K07020 K07020; uncharacterized protein
D LFM56_06835 VOC family protein K07032 K07032; uncharacterized protein
D LFM56_09930 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D LFM56_02010 hypothetical protein K07064 K07064; uncharacterized protein
D LFM56_02535 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D LFM56_07460 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D LFM56_07830 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D LFM56_12720 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D LFM56_00800 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LFM56_07205 metallophosphoesterase K07095 K07095; uncharacterized protein
D LFM56_02455 metallophosphoesterase K07098 K07098; uncharacterized protein
D LFM56_11010 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D LFM56_03175 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D LFM56_01995 roadblock/LC7 domain-containing protein K07131 K07131; uncharacterized protein
D LFM56_03225 AAA family ATPase K07133 K07133; uncharacterized protein
D LFM56_07325 C4-type zinc ribbon domain-containing protein K07164 K07164; uncharacterized protein
D LFM56_00020 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D LFM56_08765 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D LFM56_05200 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D LFM56_13820 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D LFM56_15880 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D LFM56_05705 UPF0182 family protein K09118 K09118; uncharacterized protein
D LFM56_05390 DUF167 domain-containing protein K09131 K09131; uncharacterized protein
D LFM56_02110 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D LFM56_03475 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D LFM56_15305 PH domain-containing protein K09167 K09167; uncharacterized protein
D LFM56_08285 YciI family protein K09780 K09780; uncharacterized protein
D LFM56_05745 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D LFM56_06365 hypothetical protein K09791 K09791; uncharacterized protein
D LFM56_13950 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D LFM56_07335 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D LFM56_06450 winged helix DNA-binding domain-containing protein K09927 K09927; uncharacterized protein
D LFM56_18000 winged helix DNA-binding domain-containing protein K09927 K09927; uncharacterized protein
D LFM56_06985 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D LFM56_11805 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D LFM56_12265 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D LFM56_17835 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein
D LFM56_16145 ThuA domain-containing protein K09992 K09992; uncharacterized protein
D LFM56_04000 DUF47 family protein K07220 K07220; uncharacterized protein
D LFM56_10735 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 17, 2024