+F Repair protein KO
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DNA Repair and Recombination Proteins - Citrus sinensis (Valencia orange)
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 102608758 DNA oxidative demethylase ALKBH2 isoform X1 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 102616786 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 102607644 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 102619856 uracil-DNA glycosylase, mitochondrial isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 102620793 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 102622215 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 102607342 methyl-CpG-binding domain protein 4-like protein isoform X2 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 102614909 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 102627550 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 102616863 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 102617365 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 102619750 DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 102612202 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 102626465 DNA polymerase delta small subunit isoform X3 K02328 POLD2; DNA polymerase delta subunit 2
F 102608043 uncharacterized protein LOC102608043 K03504 POLD3; DNA polymerase delta subunit 3
F 102608934 uncharacterized protein LOC102608934 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 102608212 DNA polymerase epsilon catalytic subunit A-like isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 102610782 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 102618948 DNA polymerase II subunit B4 isoform X1 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 102627400 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 102618340 flap endonuclease 1 isoform X3 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 102628869 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 102609129 DNA-repair protein XRCC1 isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 102627995 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 102619121 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 102622568 polynucleotide 3'-phosphatase ZDP isoform X2 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 102620577 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 102621976 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 102609012 poly [ADP-ribose] polymerase 2-like isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 102620309 LOW QUALITY PROTEIN: protein ADP-ribosyltransferase PARP3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 102625457 LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 2-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 102619998 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 102614644 ubiquitin receptor RAD23c-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 102610300 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 102620700 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 102622192 uncharacterized protein LOC102622192 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 102613162 RING-box protein 1A K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 102612108 cullin-4 isoform X1 K10609 CUL4; cullin 4
F 102623596 DNA damage-binding protein 1a isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 102616830 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 102618421 uncharacterized protein LOC102618421 K15082 RAD7; DNA repair protein RAD7
F 102618698 uncharacterized protein LOC102618698 K15082 RAD7; DNA repair protein RAD7
F 102630106 ATP-dependent helicase rhp16 isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 102617026 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 102617803 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 102612811 DNA-directed RNA polymerases II, IV and V subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 102623007 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 102621370 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 102629940 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 102611161 DNA-directed RNA polymerase V subunit 5A isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 102612864 DNA-directed RNA polymerase V subunit 5C isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 102623212 DNA-directed RNA polymerases II, IV and V subunit 6A K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 102612216 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 102625354 DNA-directed RNA polymerases II and V subunit 8A K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 102613961 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 102623490 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 102624903 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 102612486 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 102608086 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 102622192 uncharacterized protein LOC102622192 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 102613162 RING-box protein 1A K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 102612108 cullin-4 isoform X1 K10609 CUL4; cullin 4
F 102623596 DNA damage-binding protein 1a isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 102614817 WD repeat-containing protein ATCSA-1-like isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 102607652 protein CHROMATIN REMODELING 8 isoform X1 K10841 ERCC6; DNA excision repair protein ERCC-6
F 102624271 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 127901204 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 102628584 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 102621673 general transcription and DNA repair factor IIH helicase subunit XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 102618714 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 102606944 general transcription and DNA repair factor IIH subunit TFB1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 102629138 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 102608574 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 102625253 general transcription and DNA repair factor IIH subunit TFB4 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 102607298 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 102608810 general transcription and DNA repair factor IIH subunit TFB2-like K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 102612060 general transcription and DNA repair factor IIH subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 102629347 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 102628605 cyclin-H1-1 isoform X1 K06634 CCNH; cyclin H
E 102617561 uncharacterized protein LOC102617561 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 102611437 replication protein A 70 kDa DNA-binding subunit A isoform X1 K07466 RFA1; replication factor A1
E 102626079 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102626798 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 102610707 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 102610567 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 102619411 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D Other NER factors
E 102623615 DNA excision repair protein ERCC-1 isoform X1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 102624221 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 102606724 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 102628869 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 102610725 MMS19 nucleotide excision repair protein homolog isoform X2 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 102622384 cullin-3A K03869 CUL3; cullin 3
E 102630361 cullin-3B-like K03869 CUL3; cullin 3
E 102614386 uncharacterized protein LOC102614386 K03872 ELOC; elongin-C
E 102618508 uncharacterized protein LOC102618508 K03873 ELOB; elongin-B
E 102629354 uncharacterized protein LOC102629354 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 102614656 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 102630910 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 102617856 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
E 102627728 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 102610589 DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E 102625172 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 102608669 DNA mismatch repair protein MLH3 isoform X2 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 102612202 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 102626465 DNA polymerase delta small subunit isoform X3 K02328 POLD2; DNA polymerase delta subunit 2
E 102608043 uncharacterized protein LOC102608043 K03504 POLD3; DNA polymerase delta subunit 3
E 102608934 uncharacterized protein LOC102608934 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 102611437 replication protein A 70 kDa DNA-binding subunit A isoform X1 K07466 RFA1; replication factor A1
E 102626079 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102626798 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 102610707 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 102610567 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 102619411 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 102623585 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 102616275 replication factor C subunit 4 isoform X1 K10755 RFC2_4; replication factor C subunit 2/4
E 102617383 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 102625196 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
E 102612743 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 102615422 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 102609520 uncharacterized protein LOC102609520 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 102627400 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 102615179 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 102616157 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 102628869 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 102622839 DNA damage-binding protein cmr1 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 102624634 double-strand break repair protein MRE11 isoform X2 K10865 MRE11; double-strand break repair protein MRE11
E 102616752 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 102614559 nibrin homolog K10867 NBN; nibrin
D BRCA1-core complex
E 102626843 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 102622461 BRCA1-associated RING domain protein 1 isoform X2 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 102611871 uncharacterized protein LOC102611871 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 102631455 uncharacterized protein LOC102631455 K12173 BRE; BRCA1-A complex subunit BRE
E 102613692 uncharacterized protein LOC102613692 isoform X1 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 102620438 uncharacterized protein LOC102620438 isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 102622944 uncharacterized protein LOC102622944 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 102624568 BRCT domain-containing protein At4g02110 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 102624634 double-strand break repair protein MRE11 isoform X2 K10865 MRE11; double-strand break repair protein MRE11
E 102616752 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 102614559 nibrin homolog K10867 NBN; nibrin
D BRCA complex
E 102628548 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 102610570 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 102610570 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 102610213 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 102619562 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 102607526 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 102615229 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 102625430 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 102613667 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 102614093 protein CHROMATIN REMODELING 25 isoform X2 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 102625289 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 102611707 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 102610506 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 102630216 ATP-dependent DNA helicase Q-like 2 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 102615882 ATP-dependent DNA helicase Q-like 1 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 102608985 ATP-dependent DNA helicase Q-like SIM isoform X4 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 102610752 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102620027 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102618543 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 102610752 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102620027 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102618169 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 102617834 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 102624575 RecQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 102607469 uncharacterized protein LOC102607469 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 102611437 replication protein A 70 kDa DNA-binding subunit A isoform X1 K07466 RFA1; replication factor A1
E 102626079 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102626798 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 102610707 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 102610567 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 102619411 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 102608319 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 102608047 uncharacterized protein LOC102608047 isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 102624367 uncharacterized protein LOC102624367 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 102614078 uncharacterized protein LOC102614078 isoform X1 K19022 AP5B1; AP-5 complex subunit beta-1
E 102630193 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 102611754 uncharacterized protein LOC102611754 isoform X1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 102630865 structural maintenance of chromosomes protein 5 isoform X1 K22803 SMC5; structural maintenance of chromosomes protein 5
E 102612928 structural maintenance of chromosomes protein 6B-like K22804 SMC6; structural maintenance of chromosomes protein 6
E 102625235 uncharacterized protein LOC102625235 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 102618942 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 102620982 non-structural maintenance of chromosomes element 4 homolog A-like isoform X1 K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 102609635 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 102608362 crossover junction endonuclease EME1B-like K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 102619228 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 102613664 protein DSS1 HOMOLOG ON CHROMOSOME V K10881 SHFM1; 26 proteasome complex subunit DSS1
E 102626954 protein DSS1 HOMOLOG ON CHROMOSOME V-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 102631105 uncharacterized protein LOC102631105 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 102609773 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 102631209 single-strand DNA endonuclease 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 102621447 flap endonuclease GEN-like 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 127898610 flap endonuclease GEN-like 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 102626916 uncharacterized protein LOC102626916 isoform X1 K19026 SPG11; spatacsin
E 102622154 uncharacterized protein LOC102622154 isoform X1 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 102625664 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 102619381 protein MRG2-like isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 102611224 uncharacterized protein LOC102611224 isoform X2 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 102623512 uncharacterized protein LOC102623512 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 102630504 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 102617416 uncharacterized protein LOC102617416 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 102620551 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 102625257 DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 102610089 single-stranded DNA-binding protein WHY1, chloroplastic K26559 WHY1; single-stranded DNA-binding protein WHY1
E 102613455 single-stranded DNA-binding protein WHY2, mitochondrial isoform X1 K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 102627949 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 102626662 ATP-dependent DNA helicase 2 subunit KU80 isoform X1 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 102624634 double-strand break repair protein MRE11 isoform X2 K10865 MRE11; double-strand break repair protein MRE11
E 102616752 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 102608121 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 102621916 DNA repair protein XRCC4 isoform X3 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 102620577 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 102619121 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 102625567 uncharacterized protein LOC102625567 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 102628315 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 102612512 uncharacterized protein LOC102612512 isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 102619291 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 102627384 protein MHF1 homolog K11511 APITD1; centromere protein S
E 102609861 protein MHF2 homolog K15360 STRA13; centromere protein X
E 102615715 uncharacterized protein LOC102615715 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 102610752 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102620027 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102618169 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 102617834 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 102624575 RecQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 102607469 uncharacterized protein LOC102607469 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 102616403 uncharacterized protein LOC102616403 K10891 FANCD2; fanconi anemia group D2 protein
E 102608856 uncharacterized protein LOC102608856 isoform X1 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 102628548 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 102620438 uncharacterized protein LOC102620438 isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 102614903 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 102610570 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 102619562 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 102620559 uncharacterized protein LOC102620559 K11137 TELO2; telomere length regulation protein
E 102621542 uncharacterized protein LOC102621542 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 102615860 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 102623773 uncharacterized protein LOC102623773 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 102629725 uncharacterized protein LOC102629725 isoform X2 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 102628189 uncharacterized protein LOC102628189 K23314 WRAP53; telomerase Cajal body protein 1
E 102609202 uncharacterized protein LOC102609202 K24752 WDR70; WD repeat-containing protein 70
E 102622839 DNA damage-binding protein cmr1 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 102631204 DNA polymerase eta isoform X4 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 102631401 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 102626428 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 102622531 LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 102628134 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102607558 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102610592 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102610902 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102624425 uncharacterized protein LOC102624425 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102614855 DNA repair protein RAD5A K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 102608925 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 102577979 UEV; ubiquitin-conjugating enzyme variant K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 102626070 ubiquitin-conjugating enzyme E2 variant 1B-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 102577935 UBC13; ubiquitin-conjugating enzyme 13 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 102609816 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 102627400 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 102611453 uncharacterized protein LOC102611453 isoform X1 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 102614578 uncharacterized protein LOC102614578 K10903 HUS1; HUS1 checkpoint protein
D 102612729 uncharacterized protein LOC102612729 K10903 HUS1; HUS1 checkpoint protein
D 102608019 uncharacterized protein LOC102608019 K10903 HUS1; HUS1 checkpoint protein
D 112495979 uncharacterized protein LOC112495979 K10903 HUS1; HUS1 checkpoint protein
D 127903799 LOW QUALITY PROTEIN: uncharacterized protein LOC127903799 K10903 HUS1; HUS1 checkpoint protein
D 102608653 uncharacterized protein LOC102608653 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 102630797 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 102616275 replication factor C subunit 4 isoform X1 K10755 RFC2_4; replication factor C subunit 2/4
D 102617383 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 102625196 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D 102612743 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 102615422 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 102609520 uncharacterized protein LOC102609520 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 102608653 uncharacterized protein LOC102608653 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 102618757 uncharacterized protein LOC102618757 isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 102621455 uncharacterized protein LOC102621455 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 102620559 uncharacterized protein LOC102620559 K11137 TELO2; telomere length regulation protein
D 102623431 uncharacterized protein LOC102623431 K20403 TTI1; TELO2-interacting protein 1
D 102619829 uncharacterized protein At2g39910 isoform X1 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 102615017 ubiquitin-like domain-containing protein CIP73 isoform X3 K23390 BAG6; large proline-rich protein BAG6
D 102623665 protein GET4 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 102612093 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 102620162 serine/threonine-protein kinase ATM isoform X5 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 102630484 14-3-3-like protein GF14 kappa isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 102613414 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 102630125 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 102617582 14-3-3-like protein A K06630 YWHAE; 14-3-3 protein epsilon
D 102608475 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 102622535 14-3-3-like protein isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 102628987 14-3-3 protein 7 K06630 YWHAE; 14-3-3 protein epsilon
D 102623806 14-3-3 protein 6 K06630 YWHAE; 14-3-3 protein epsilon
D 102614168 wee1-like protein kinase isoform X1 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 102618575 uncharacterized protein LOC102618575 isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 102613697 serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102613123 serine/threonine-protein kinase Nek6-like isoform X2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102613929 serine/threonine-protein kinase Nek1-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102608053 serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102625540 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102614742 uncharacterized protein LOC102614742 isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 102616626 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 102619656 uncharacterized protein LOC102619656 K25059 SDE2; replication stress response regulator SDE2
D 127901093 uncharacterized protein LOC127901093 K25059 SDE2; replication stress response regulator SDE2
D 102610888 protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 102618799 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 102615838 uncharacterized protein LOC102615838 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 102625684 uncharacterized protein LOC102625684 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 102608159 uncharacterized protein LOC102608159 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 102610837 DNA cross-link repair protein SNM1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 102626587 uncharacterized protein LOC102626587 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 102617172 uncharacterized protein LOC102617172 isoform X1 K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 102618279 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 102628555 uncharacterized protein LOC102628555 isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 102611082 uncharacterized protein LOC102611082 isoform X1 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 102622496 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 102621066 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 102622801 endonuclease 4 isoform X2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 102616483 switch 2 isoform X2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 102630495 pre-mRNA-processing factor 19 homolog 2 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 102611813 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 102608089 pre-mRNA-splicing factor SPF27 homolog isoform X1 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 102611423 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 102616605 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102629555 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 102622151 deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 102611797 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 102621651 ribonucleoside-diphosphate reductase large subunit-like isoform X1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 102612388 ribonucleoside-diphosphate reductase large subunit isoform X1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 102614082 ribonucleoside-diphosphate reductase small chain-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 102624257 ribonucleoside-diphosphate reductase small chain A K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 102625479 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 102607644 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 102619856 uracil-DNA glycosylase, mitochondrial isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 102629620 DNA-3-methyladenine glycosylase 1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 102613060 alkylbase DNA glycosidase-like protein mag2 isoform X1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 102620793 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 102622215 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 102614205 uncharacterized protein LOC102614205 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102627575 uncharacterized protein LOC102627575 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102607933 uncharacterized protein LOC102607933 isoform X2 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102621461 uncharacterized protein LOC102621461 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102623818 LOW QUALITY PROTEIN: uncharacterized protein LOC102623818 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102621076 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 102627550 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 102616863 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 102617365 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 102617923 DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 102617268 DNA polymerase I B, chloroplastic/mitochondrial isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 102617268 DNA polymerase I B, chloroplastic/mitochondrial isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 4271235 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 4271233 rpoC2; RNA polymerase beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 4271234 rpoC1; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 4271184 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 102631102 uncharacterized protein LOC102631102 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 102620340 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 102614724 DNA repair protein RecA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 102626696 DNA repair protein RecA homolog 1, chloroplastic isoform X2 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 102614724 DNA repair protein RecA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 102626696 DNA repair protein RecA homolog 1, chloroplastic isoform X2 K03553 recA; recombination protein RecA
E 102628276 uncharacterized protein LOC102628276 K04485 radA; DNA repair protein RadA/Sms
E 102606824 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 102623274 DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 102614049 DNA gyrase subunit B, chloroplastic/mitochondrial-like isoform X1 K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 102613336 uncharacterized protein LOC102613336 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 102614724 DNA repair protein RecA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D 102626696 DNA repair protein RecA homolog 1, chloroplastic isoform X2 K03553 recA; recombination protein RecA
D 102620340 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 102616605 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102629555 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 102622151 deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024