+D GENES KO #

  KEGG Orthology (KO) - Caldicellulosiruptor acetigenus 6A

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:clc00010] D Calla_0317 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_0291 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_1780 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Calla_0653 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Calla_1483 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Calla_0041 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0371 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_1778 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0776 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Calla_0777 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Calla_0775 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Calla_0774 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Calla_0654 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Calla_0779 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Calla_1720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1121 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1719 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Calla_1722 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1122 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1721 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Calla_0514 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Calla_0515 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Calla_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Calla_0203 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00020 Citrate cycle (TCA cycle) [PATH:clc00020] D Calla_0210 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Calla_1186 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Calla_1202 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Calla_1184 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Calla_1183 isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D Calla_0514 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Calla_0515 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Calla_0516 Pyruvate/ketoisovalerate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Calla_0513 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Calla_2471 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Calla_1210 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Calla_1720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1121 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1719 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Calla_1722 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1122 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1721 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:clc00030] D Calla_1780 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Calla_0464 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Calla_0092 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Calla_1849 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Calla_1850 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Calla_0859 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Calla_1766 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Calla_1438 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Calla_1437 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Calla_1762 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Calla_0045 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Calla_0375 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Calla_0046 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Calla_0376 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Calla_1292 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Calla_0041 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0371 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_1778 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0653 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Calla_1483 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:clc00040] D Calla_0047 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D Calla_0377 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D Calla_0048 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Calla_0378 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Calla_1822 glycoside hydrolase family 4 K22933 lplD; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67] D Calla_0773 Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Calla_1257 Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Calla_1258 Mannitol dehydrogenase domain-containing protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D Calla_0563 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Calla_0085 Xylose isomerase domain-containing protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D Calla_0464 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Calla_0040 Carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17] D Calla_0370 Carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17] D Calla_0333 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Calla_0362 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Calla_1807 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Calla_1987 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Calla_2220 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:clc00051] D Calla_0017 type 3a cellulose-binding domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Calla_0987 glycoside hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Calla_2166 glycoside hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Calla_1894 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Calla_1780 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Calla_2119 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Calla_0841 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Calla_2018 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Calla_2220 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Calla_0653 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Calla_1483 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Calla_2202 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Calla_1807 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Calla_1987 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Calla_0362 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Calla_0041 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0371 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_1778 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0776 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Calla_1766 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:clc00052] D Calla_1392 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Calla_1393 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Calla_0559 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Calla_1391 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Calla_0563 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Calla_0317 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_0291 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_0051 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Calla_1563 Glycoside hydrolase family 42 domain protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D Calla_0522 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] D Calla_1244 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Calla_0653 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Calla_1483 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Calla_2189 alpha amylase catalytic region K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism D Calla_0085 Xylose isomerase domain-containing protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] C 00500 Starch and sucrose metabolism [PATH:clc00500] D Calla_0563 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Calla_0066 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Calla_0253 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Calla_0015 glycoside hydrolase family 48 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_0018 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_2118 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_0352 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_2385 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_0255 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Calla_0322 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Calla_0323 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Calla_0321 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Calla_0324 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Calla_0320 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Calla_2216 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Calla_0366 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D Calla_0239 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D Calla_2235 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1] D Calla_2219 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Calla_2121 glycoside hydrolase 15-related protein K01178 SGA1; glucoamylase [EC:3.2.1.3] D Calla_2189 alpha amylase catalytic region K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Calla_2010 glycoside hydrolase family 65 domain protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D Calla_0317 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_0291 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_1780 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Calla_1894 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:clc00520] D Calla_0254 glycosyltransferase 36 K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280] D Calla_0314 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Calla_1894 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Calla_0097 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Calla_0096 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Calla_1763 Bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Calla_1768 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_2140 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_1336 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_2071 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Calla_1077 N-acetylneuraminic acid synthase domain-containing protein K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132] D Calla_1580 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Calla_0627 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Calla_1477 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Calla_0628 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Calla_0086 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Calla_0629 hexapeptide repeat-containing transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D Calla_0172 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Calla_0521 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Calla_0317 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_0291 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_0563 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Calla_1392 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Calla_1393 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Calla_0559 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Calla_1391 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Calla_1780 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Calla_2119 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Calla_0841 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Calla_2018 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Calla_0322 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Calla_0323 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:clc00620] D Calla_1720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1121 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1719 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Calla_1722 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1122 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1721 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Calla_0514 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Calla_0515 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Calla_0203 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Calla_0867 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Calla_0868 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Calla_0654 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Calla_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Calla_1582 beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Calla_0479 malic protein NAD-binding K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Calla_0120 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Calla_0707 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Calla_0123 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Calla_0121 sodium pump decarboxylase gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D Calla_2471 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Calla_1210 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Calla_0779 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Calla_1214 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Calla_1216 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:clc00630] D Calla_1184 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Calla_0373 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D Calla_0043 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D Calla_1755 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Calla_0477 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Calla_1862 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Calla_0045 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Calla_0375 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Calla_0339 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9] C 00640 Propanoate metabolism [PATH:clc00640] D Calla_0867 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Calla_0868 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Calla_1720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1121 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1719 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Calla_1722 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1122 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1721 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Calla_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Calla_0697 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:clc00650] D Calla_0123 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Calla_0122 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Calla_0706 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Calla_1720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1121 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1719 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Calla_1722 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1122 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1721 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Calla_0514 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Calla_0515 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Calla_1219 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Calla_0902 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Calla_1218 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:clc00660] D Calla_1219 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Calla_0902 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Calla_1218 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Calla_1872 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Calla_1871 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Calla_1870 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism D Calla_0776 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:clc00190] D Calla_0796 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Calla_0794 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Calla_0795 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Calla_0797 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Calla_0793 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Calla_0800 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Calla_0798 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Calla_0799 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:clc00710] D Calla_0776 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Calla_0777 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Calla_0041 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0371 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_1778 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0092 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Calla_1849 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Calla_1850 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Calla_1766 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Calla_0464 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Calla_0859 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Calla_0779 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:clc00720] D Calla_1720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1121 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1719 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Calla_1722 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1122 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1721 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Calla_0779 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Calla_2471 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Calla_1210 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Calla_0514 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Calla_0515 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Calla_0516 Pyruvate/ketoisovalerate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Calla_0513 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Calla_1184 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Calla_1989 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Calla_1362 Bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Calla_0391 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Calla_2155 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Calla_0062 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_2154 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_1293 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_0868 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Calla_0867 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:clc00680] D Calla_2155 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Calla_0062 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_2154 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_1293 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_0477 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Calla_0774 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Calla_0041 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0371 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_1778 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Calla_0653 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Calla_1483 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Calla_2088 formylmethanofuran dehydrogenase subunit E region K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D Calla_0867 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Calla_0868 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Calla_1720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1121 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1719 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Calla_1722 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1122 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1721 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Calla_0775 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Calla_1906 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Calla_0710 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Calla_2083 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:clc00910] D Calla_1193 nitrogenase component I, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Calla_1192 oxidoreductase/nitrogenase component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Calla_1196 Nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Calla_0582 Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Calla_1755 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Calla_1754 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:clc00920] D Calla_0470 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Calla_0196 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Calla_1023 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Calla_0537 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:clc00061] D Calla_0569 Acyl carrier protein K02078 acpP; acyl carrier protein D Calla_0567 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Calla_0566 3-oxoacyl-(acyl-carrier-protein) synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Calla_0570 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Calla_0568 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Calla_1836 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D Calla_0203 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:clc00561] D Calla_1862 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Calla_0565 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Calla_0394 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Calla_2184 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Calla_0714 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Calla_0663 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Calla_1454 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Calla_0522 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] D Calla_1244 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:clc00564] D Calla_1401 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Calla_0394 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Calla_2184 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Calla_0714 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Calla_0663 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Calla_1471 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Calla_1360 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Calla_0829 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D Calla_1312 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:clc00600] D Calla_0051 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Calla_0522 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] D Calla_1244 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:clc00230] D Calla_0730 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Calla_1437 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Calla_1762 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Calla_0818 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Calla_0814 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Calla_0816 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Calla_0819 Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Calla_0821 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Calla_0820 Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Calla_0817 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Calla_0586 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Calla_0587 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Calla_0822 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Calla_0541 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Calla_0815 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Calla_1585 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Calla_1436 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Calla_0858 Multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Calla_1757 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Calla_1048 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Calla_1275 Nucleoside-triphosphatase rdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Calla_0802 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Calla_0452 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Calla_0286 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Calla_1795 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Calla_1567 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D Calla_1584 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Calla_1505 adenylate/guanylate cyclase with TPR repeats K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Calla_2345 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Calla_0409 Conserved hypothetical protein CHP00282 K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Calla_1138 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Calla_1751 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] C 00240 Pyrimidine metabolism [PATH:clc00240] D Calla_0758 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Calla_0959 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Calla_0958 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Calla_0755 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Calla_0756 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Calla_0760 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Calla_0759 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Calla_0762 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Calla_0757 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Calla_1474 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Calla_1751 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Calla_0688 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Calla_2323 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Calla_0713 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Calla_1816 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Calla_1765 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Calla_0753 Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Calla_0409 Conserved hypothetical protein CHP00282 K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Calla_1439 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Calla_1441 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Calla_0286 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Calla_1795 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Calla_1764 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Calla_1208 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Calla_0788 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Calla_1833 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:clc00250] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Calla_0601 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Calla_0957 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Calla_1769 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Calla_1240 fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Calla_0638 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Calla_0637 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Calla_2345 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Calla_0541 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Calla_0755 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Calla_1754 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Calla_1755 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Calla_0758 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Calla_0959 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Calla_0958 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Calla_0820 Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Calla_0097 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Calla_0818 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:clc00260] D Calla_1594 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Calla_0546 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Calla_1592 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Calla_1593 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Calla_1743 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Calla_0477 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Calla_1862 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Calla_0775 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Calla_1906 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Calla_0710 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Calla_1988 aminotransferase class I and II K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Calla_1103 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Calla_1104 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Calla_2360 Tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:clc00270] D Calla_0196 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Calla_1023 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Calla_2065 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D Calla_0274 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Calla_0897 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Calla_1903 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Calla_0702 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Calla_0590 purine or other phosphorylase family 1 K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Calla_0743 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Calla_0858 Multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Calla_1712 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Calla_0742 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Calla_1713 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Calla_1594 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Calla_0546 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Calla_1592 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Calla_0537 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Calla_0536 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Calla_0904 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Calla_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Calla_1906 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:clc00280] D Calla_0904 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:clc00290] D Calla_1872 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Calla_1871 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Calla_1870 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Calla_1219 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Calla_0902 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Calla_1218 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Calla_1217 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Calla_0903 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Calla_0904 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Calla_1214 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Calla_1216 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:clc00300] D Calla_1592 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Calla_1594 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Calla_0546 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Calla_0545 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Calla_0544 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Calla_1496 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Calla_0220 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Calla_1891 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Calla_1798 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Calla_1324 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Calla_1342 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Calla_1341 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation C 00220 Arginine biosynthesis [PATH:clc00220] D Calla_0960 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Calla_0638 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Calla_0637 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Calla_0820 Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Calla_1755 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Calla_0758 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Calla_0959 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Calla_0958 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Calla_1979 GCN5-related N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D Calla_0496 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Calla_0497 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Calla_1496 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:clc00330] D Calla_1839 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Calla_0703 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Calla_0702 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Calla_1903 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Calla_0727 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Calla_1054 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Calla_1053 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:clc00340] D Calla_0849 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Calla_0850 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Calla_0842 Histidine biosynthesis bifunctional protein hisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Calla_0844 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Calla_0845 Imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Calla_0843 Imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Calla_1268 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_0847 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_1124 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Calla_0848 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:clc00350] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Calla_1268 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_0847 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_0203 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:clc00360] D Calla_0426 AMP-dependent synthetase and ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Calla_0878 AMP-dependent synthetase and ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Calla_0881 AMP-dependent synthetase and ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Calla_1268 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_0847 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:clc00380] D Calla_0339 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:clc00400] D Calla_1269 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Calla_0738 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Calla_1111 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Calla_1113 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Calla_1271 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Calla_0667 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Calla_1109 Chorismate binding domain-containing protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Calla_1108 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Calla_1107 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Calla_1105 N-(5'phosphoribosyl)anthranilate isomerase (PRAI) K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Calla_1106 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Calla_1103 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Calla_1104 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Calla_2360 Tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Calla_0712 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D Calla_1591 amino acid-binding ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D Calla_1270 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Calla_1718 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Calla_1268 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_0847 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:clc00410] D Calla_1607 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Calla_1608 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:clc00430] D Calla_0868 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Calla_0867 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:clc00450] D Calla_2065 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D Calla_0274 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Calla_2256 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Calla_2081 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:clc00460] D Calla_0066 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Calla_0253 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Calla_0477 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:clc00470] D Calla_1536 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Calla_1828 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Calla_0820 Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Calla_1827 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Calla_1339 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Calla_1891 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Calla_1324 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:clc00480] D Calla_0702 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:clc00515] D Calla_2310 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:clc00514] D Calla_2310 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:clc00511] D Calla_0051 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Calla_2122 glycoside hydrolase family 2 sugar binding K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D Calla_1863 alpha-L-fucosidase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis [PATH:clc00540] D Calla_0630 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:clc00541] D Calla_0563 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Calla_0559 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Calla_1391 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Calla_2334 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Calla_2330 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Calla_2333 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Calla_0841 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Calla_2018 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Calla_1763 Bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Calla_1580 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Calla_0172 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Calla_0173 NAD-dependent epimerase/dehydratase K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367] D Calla_0174 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] D Calla_0627 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Calla_1477 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Calla_0628 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Calla_0086 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Calla_0629 hexapeptide repeat-containing transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:clc00550] D Calla_1768 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_2140 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_1336 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_2071 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Calla_0307 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Calla_1339 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Calla_1342 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Calla_1828 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Calla_1341 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Calla_1472 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Calla_1493 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Calla_1340 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Calla_1337 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Calla_2384 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Calla_0692 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Calla_1343 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Calla_0644 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_0668 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_0978 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_1445 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Calla_1444 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:clc00552] D Calla_1493 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Calla_0633 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Calla_0641 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Calla_1454 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:clc00543] D Calla_0175 glycosyl transferase group 1 K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D Calla_0249 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D Calla_0196 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:clc00730] D Calla_2031 Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Calla_2030 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Calla_2033 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Calla_1127 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_0965 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_0964 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Calla_2034 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Calla_2181 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Calla_0676 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Calla_2035 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D Calla_2032 Thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Calla_0463 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Calla_2479 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Calla_1465 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Calla_1138 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:clc00740] D Calla_0329 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Calla_0331 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Calla_0328 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Calla_0330 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Calla_0472 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Calla_0730 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:clc00750] D Calla_1743 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Calla_1542 Pyridoxal biosynthesis lyase pdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Calla_1541 Glutamine amidotransferase subunit pdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:clc00760] D Calla_0601 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Calla_0600 Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Calla_0602 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Calla_1436 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Calla_0639 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Calla_1751 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Calla_2125 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Calla_0721 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:clc00770] D Calla_1219 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Calla_0902 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Calla_1218 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Calla_1217 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Calla_0903 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Calla_1609 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Calla_1608 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Calla_1800 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Calla_0454 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Calla_1751 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Calla_0615 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Calla_0810 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Calla_1539 Holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Calla_0904 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Calla_1607 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:clc00780] D Calla_0570 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Calla_0568 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Calla_1836 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Calla_2383 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Calla_2138 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:clc00790] D Calla_0230 protein of unknown function DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Calla_2479 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Calla_2135 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Calla_2137 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Calla_0864 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Calla_0329 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Calla_1998 glutamine amidotransferase of anthranilate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D Calla_1997 Chorismate binding domain-containing protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Calla_1996 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Calla_0229 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Calla_2159 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Calla_2164 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Calla_2378 NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Calla_1221 beta-lactamase domain-containing protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Calla_1283 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Calla_1282 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Calla_1286 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Calla_1285 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Calla_0604 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:clc00670] D Calla_1989 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Calla_1362 Bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Calla_0477 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Calla_0816 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Calla_0815 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Calla_0457 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Calla_2065 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D Calla_1833 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Calla_0648 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:clc00860] D Calla_1390 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Calla_1265 uroporphyrinogen-III decarboxylase-like protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Calla_1161 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:clc00900] D Calla_0676 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Calla_1470 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Calla_0940 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Calla_0956 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Calla_0548 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Calla_1468 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Calla_0420 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Calla_1472 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Calla_1020 peptidase M48 Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis D Calla_2183 glycosyl transferase family 2 K10211 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase [EC:2.4.1.-] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Calla_0092 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Calla_1849 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Calla_1850 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:clc00523] D Calla_2334 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Calla_2330 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Calla_2333 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Calla_2330 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:clc00946] D Calla_0066 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Calla_0253 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:clc00332] D Calla_1054 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Calla_1053 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:clc00261] D Calla_1594 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Calla_0546 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Calla_0545 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Calla_0544 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:clc00521] D Calla_0317 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_0291 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_2334 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Calla_2330 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Calla_2333 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Calla_0317 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Calla_0291 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:clc00525] D Calla_2334 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Calla_2330 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:clc00401] D Calla_1270 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Calla_1268 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_0847 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Calla_1109 Chorismate binding domain-containing protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Calla_1108 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Calla_0567 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Calla_0568 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Calla_0569 Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:clc00999] D Calla_0897 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Calla_0066 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Calla_0253 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D Calla_0123 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Calla_0122 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Calla_0706 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:clc00625] D Calla_0203 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Calla_1192 oxidoreductase/nitrogenase component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Calla_1196 Nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Calla_1193 nitrogenase component I, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:clc00633] D Calla_2155 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Calla_0062 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_2154 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_1293 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Calla_1720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1121 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Calla_1719 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Calla_1722 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1122 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Calla_1721 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:clc00626] D Calla_0203 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:clc03020] D Calla_1310 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Calla_1309 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Calla_1130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Calla_0453 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:clc03010] D Calla_1476 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Calla_1152 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Calla_1131 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Calla_1141 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Calla_1868 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Calla_1306 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Calla_1144 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Calla_1859 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Calla_1159 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Calla_1132 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Calla_1307 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Calla_1133 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Calla_1145 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Calla_0473 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Calla_1378 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Calla_1149 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Calla_1866 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Calla_1154 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Calla_1555 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Calla_0656 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Calla_0948 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Calla_1155 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Calla_1158 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Calla_1157 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Calla_1146 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Calla_1143 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Calla_0946 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Calla_1715 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Calla_0947 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Calla_0949 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Calla_1860 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Calla_1148 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Calla_1140 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Calla_1151 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Calla_1129 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Calla_1142 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Calla_1374 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Calla_0594 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Calla_0528 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Calla_1153 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Calla_1156 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Calla_1147 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Calla_0636 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Calla_0530 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Calla_1983 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Calla_1150 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Calla_0486 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Calla_0647 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Calla_0952 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Calla_2488 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Calla_0593 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Calla_1134 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Calla_1308 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Calla_R0048 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0051 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Calla_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Calla_R0050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Calla_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Calla_R0049 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Calla_R0046 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:clc00970] D Calla_R0029 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Calla_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Calla_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Calla_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Calla_R0052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Calla_R0036 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Calla_R0007 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Calla_R0010 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Calla_R0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Calla_R0043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Calla_R0015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Calla_R0031 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Calla_R0057 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Calla_R0009 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Calla_R0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Calla_R0024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Calla_R0044 tRNA-His K14226 tRNA-His; tRNA His D Calla_R0028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Calla_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0014 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0053 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Calla_R0042 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Calla_R0058 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Calla_R0016 tRNA-Met K14230 tRNA-Met; tRNA Met D Calla_R0017 tRNA-Met K14230 tRNA-Met; tRNA Met D Calla_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met D Calla_R0008 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Calla_R0005 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Calla_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Calla_R0056 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Calla_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0012 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Calla_R0020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Calla_R0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Calla_R0041 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Calla_R0055 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Calla_R0006 tRNA-Val K14237 tRNA-Val; tRNA Val D Calla_R0025 tRNA-Val K14237 tRNA-Val; tRNA Val D Calla_1390 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Calla_0195 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Calla_1354 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Calla_1353 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Calla_1355 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Calla_0719 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Calla_0351 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Calla_0780 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Calla_1313 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Calla_1724 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Calla_0197 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Calla_2081 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Calla_0457 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Calla_0865 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Calla_0643 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Calla_0737 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Calla_0909 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Calla_1825 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Calla_0338 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Calla_0350 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Calla_0671 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Calla_0672 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Calla_1710 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Calla_1322 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:clc03060] D Calla_1139 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Calla_0951 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Calla_1883 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Calla_1773 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Calla_1772 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Calla_2022 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Calla_2485 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Calla_1876 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Calla_1379 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Calla_R0033 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Calla_0579 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Calla_1050 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Calla_0751 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:clc04122] D Calla_1127 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_0965 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_1171 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Calla_1125 tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Calla_1290 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Calla_1283 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Calla_1282 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Calla_0964 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Calla_2036 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Calla_2161 thiamineS protein K03154 thiS; sulfur carrier protein D Calla_2033 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:clc03018] D Calla_0774 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Calla_0474 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Calla_1880 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Calla_1016 DEAD/DEAH box helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Calla_0480 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Calla_0408 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Calla_1771 Ribocuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D Calla_0653 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Calla_0969 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Calla_2388 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Calla_1919 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Calla_0871 Protein hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:clc03030] D Calla_0650 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Calla_1466 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Calla_1879 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Calla_1205 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Calla_1556 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Calla_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Calla_0243 DnaB domain protein helicase domain protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Calla_1714 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Calla_1566 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Calla_1867 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Calla_0728 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Calla_1370 ribonuclease HII/HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Calla_0811 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Calla_1026 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:clc03410] D Calla_0482 8-oxoguanine DNA glycosylase domain-containing protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Calla_0838 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Calla_1497 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Calla_1112 Xylose isomerase domain-containing protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Calla_0811 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Calla_0893 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Calla_1026 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:clc03420] D Calla_1760 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Calla_0807 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D Calla_0808 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D Calla_2041 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D Calla_0673 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Calla_2364 LexA repressor K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Calla_0811 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Calla_1026 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:clc03430] D Calla_0874 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D Calla_1052 MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D Calla_0873 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D Calla_0673 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Calla_2364 LexA repressor K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Calla_0418 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Calla_0419 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Calla_0893 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Calla_1867 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Calla_0650 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Calla_1466 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Calla_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Calla_1879 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Calla_1556 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Calla_1205 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Calla_1026 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Calla_1008 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:clc03440] D Calla_0893 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Calla_1867 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Calla_0003 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D Calla_0781 DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O) D Calla_0555 Recombination protein recR K06187 recR; recombination protein RecR D Calla_1358 Protein recA K03553 recA; recombination protein RecA D Calla_0811 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Calla_0525 Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D Calla_0526 Holliday junction DNA helicase RuvB domain-containing protein K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Calla_0524 Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Calla_0612 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Calla_1315 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Calla_2430 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Calla_0650 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Calla_1466 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Calla_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Calla_1879 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Calla_1556 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Calla_1205 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Calla_0455 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:clc02010] D Calla_1289 extracellular solute-binding protein family 1 K05772 tupA; tungstate transport system substrate-binding protein D Calla_1288 ABC-type transporter, integral membrane subunit K05773 tupB; tungstate transport system permease protein D Calla_1287 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Calla_1188 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Calla_1187 ABC-type transporter, integral membrane subunit K02018 modB; molybdate transport system permease protein D Calla_1463 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Calla_2214 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Calla_2218 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Calla_2217 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Calla_1785 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Calla_0357 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Calla_1784 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Calla_1783 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Calla_0269 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_0090 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_0356 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_1264 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_1841 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_1266 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_0089 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_0270 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_0354 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_1263 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_1843 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_1262 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_1842 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_0088 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_0355 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_0271 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_0115 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein D Calla_0117 ABC-type transporter, integral membrane subunit K10238 thuG; trehalose/maltose transport system permease protein D Calla_0020 monosaccharide-transporting atpase K10543 xylF; D-xylose transport system substrate-binding protein D Calla_0574 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Calla_2478 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Calla_0575 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Calla_0576 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Calla_0853 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Calla_1185 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Calla_0767 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Calla_0766 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein D Calla_0765 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein D Calla_0764 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Calla_0763 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Calla_1546 ABC-type transporter, periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Calla_1553 ABC-type transporter, integral membrane subunit K15581 oppB; oligopeptide transport system permease protein D Calla_1550 ABC-type transporter, integral membrane subunit K15582 oppC; oligopeptide transport system permease protein D Calla_1549 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Calla_1970 ABC-type metal ion transporter, periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein D Calla_1972 ABC-type transporter, integral membrane subunit K09816 znuB; zinc transport system permease protein D Calla_1971 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Calla_1738 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D Calla_1739 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Calla_1737 ABC-type transporter, integral membrane subunit K02008 cbiQ; cobalt/nickel transport system permease protein D Calla_1736 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Calla_2428 BioY protein K03523 bioY; biotin transport system substrate-specific component D Calla_1099 ABC-type transporter, integral membrane subunit K16785 ecfT; energy-coupling factor transport system permease protein D Calla_1101 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Calla_1100 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Calla_0031 abc-type na+ efflux pump permease component-like protein K09696 natB; sodium transport system permease protein D Calla_0032 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Calla_1460 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Calla_1461 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Calla_0943 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Calla_0944 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Calla_2267 hypothetical protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Calla_2266 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Calla_0994 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_2064 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_0400 peptidase C39 bacteriocin processing K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter C 02060 Phosphotransferase system (PTS) [PATH:clc02060] D Calla_2201 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Calla_2067 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Calla_0669 hypothetical protein K02784 ptsH; phosphocarrier protein HPr D Calla_2202 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:clc03070] D Calla_1773 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Calla_1772 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Calla_0951 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Calla_1883 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Calla_1139 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Calla_2022 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Calla_2485 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Calla_1876 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Calla_0579 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Calla_1379 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:clc02020] D Calla_0856 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Calla_0857 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Calla_1163 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Calla_2479 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Calla_0574 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Calla_2478 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Calla_0824 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Calla_1424 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Calla_1080 flagellin domain protein K02406 fliC; flagellin D Calla_1926 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Calla_0490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Calla_2103 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD D Calla_2320 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Calla_2321 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Calla_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D Calla_2095 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Calla_2096 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR D Calla_0725 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Calla_0479 malic protein NAD-binding K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Calla_0032 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Calla_0031 abc-type na+ efflux pump permease component-like protein K09696 natB; sodium transport system permease protein D Calla_1082 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Calla_1197 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Calla_1857 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Calla_1755 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Calla_1516 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Calla_1517 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Calla_1280 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Calla_0019 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Calla_2141 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Calla_1930 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1433 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1874 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1931 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1434 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1941 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_2180 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_1435 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_2086 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Calla_1311 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Calla_0358 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_0272 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_1261 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_1846 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_0021 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_0359 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_0273 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_1845 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_1260 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_1251 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_0091 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_1580 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Calla_0015 glycoside hydrolase family 48 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_0018 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_2118 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_0352 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_2385 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Calla_1090 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:clc02024] D Calla_0871 Protein hfq K03666 hfq; host factor-I protein D Calla_1109 Chorismate binding domain-containing protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Calla_1108 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Calla_1185 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Calla_0767 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Calla_0766 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein D Calla_0765 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein D Calla_0764 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Calla_0763 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Calla_0017 type 3a cellulose-binding domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Calla_0987 glycoside hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Calla_2166 glycoside hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Calla_0331 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Calla_1546 ABC-type transporter, periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Calla_1553 ABC-type transporter, integral membrane subunit K15581 oppB; oligopeptide transport system permease protein D Calla_1550 ABC-type transporter, integral membrane subunit K15582 oppC; oligopeptide transport system permease protein D Calla_1549 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Calla_0994 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_2064 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_0400 peptidase C39 bacteriocin processing K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_0993 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D Calla_2063 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D Calla_2485 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Calla_0951 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Calla_1883 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Calla_1139 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Calla_2022 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Calla_1876 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Calla_0579 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Calla_1379 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Calla_0725 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:clc02030] D Calla_0019 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Calla_2141 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Calla_1931 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1434 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1930 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1433 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1874 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1941 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_2180 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_1435 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_1929 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Calla_1916 CheC domain protein K03409 cheX; chemotaxis protein CheX D Calla_2086 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Calla_1311 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Calla_1928 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Calla_1280 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Calla_1954 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Calla_1943 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Calla_1942 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Calla_0490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Calla_0491 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:clc02040] D Calla_1956 Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE D Calla_1955 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Calla_1954 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Calla_1953 h+transporting two-sector atpase B/b' subunit K02411 fliH; flagellar assembly protein FliH D Calla_1952 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Calla_1951 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Calla_1944 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Calla_1943 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Calla_1942 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Calla_1940 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Calla_1939 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Calla_1938 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Calla_1937 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Calla_1935 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Calla_1936 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Calla_1958 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Calla_1957 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Calla_1948 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Calla_1946 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Calla_0079 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Calla_0082 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Calla_0083 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Calla_1088 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Calla_1087 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Calla_1080 flagellin domain protein K02406 fliC; flagellin D Calla_1062 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Calla_1061 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Calla_0490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Calla_0491 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Calla_1090 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Calla_1565 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Calla_1926 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Calla_0774 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:clc01501] D Calla_1546 ABC-type transporter, periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Calla_1553 ABC-type transporter, integral membrane subunit K15581 oppB; oligopeptide transport system permease protein D Calla_1550 ABC-type transporter, integral membrane subunit K15582 oppC; oligopeptide transport system permease protein D Calla_1549 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Calla_2384 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Calla_0692 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:clc01502] D Calla_1828 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Calla_1536 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Calla_1341 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Calla_1340 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Calla_1337 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:clc01503] D Calla_0219 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Calla_0481 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Calla_0498 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Calla_0824 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Calla_1424 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:clc01000] C 01001 Protein kinases [BR:clc01001] D Calla_0462 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Calla_0679 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Calla_0038 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Calla_0225 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Calla_1790 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Calla_0856 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Calla_2320 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Calla_2095 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Calla_1931 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1434 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_0358 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_0272 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_1261 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_1846 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:clc01009] D Calla_1713 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Calla_0653 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Calla_0461 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:clc01002] D Calla_0751 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Calla_1515 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Calla_1450 Germination protease K06012 gpr; spore protease [EC:3.4.24.78] D Calla_0802 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Calla_0336 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Calla_0994 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_2064 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_0400 peptidase C39 bacteriocin processing K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_0818 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Calla_0097 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Calla_0957 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Calla_0406 Abortive infection protein K07052 K07052; CAAX protease family protein D Calla_0539 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Calla_0220 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Calla_1137 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Calla_1110 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Calla_0962 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Calla_1756 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Calla_1020 peptidase M48 Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D Calla_1469 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Calla_0483 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D Calla_0824 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Calla_1424 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Calla_1886 peptidase S8 and S53 subtilisin kexin sedolisin K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D Calla_0444 peptidase S8 and S53 subtilisin kexin sedolisin K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D Calla_0644 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_0668 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_0978 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_1569 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Calla_1397 anti-sigma H sporulation factor, LonB K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Calla_0869 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Calla_1050 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Calla_0077 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Calla_1458 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Calla_2424 Rhomboid family protein K07059 K07059; rhomboid family protein D Calla_0724 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D Calla_1961 ATP-dependent protease hslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Calla_0215 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Calla_0388 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:clc01003] D Calla_2310 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Calla_1454 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Calla_0321 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Calla_2384 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Calla_0175 glycosyl transferase group 1 K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D Calla_0249 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:clc01005] D Calla_0630 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D Calla_2026 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:clc01011] D Calla_1768 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_2140 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_1336 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Calla_2071 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Calla_0307 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Calla_1339 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Calla_1342 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Calla_1828 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Calla_1536 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Calla_1827 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Calla_1340 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Calla_1337 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Calla_1493 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Calla_1711 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Calla_0840 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Calla_2384 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Calla_0692 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Calla_1343 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Calla_0644 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_0668 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_0978 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Calla_0809 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Calla_0386 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Calla_0979 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Calla_2111 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Calla_2129 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Calla_0219 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Calla_0481 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Calla_0498 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:clc01004] D Calla_0567 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Calla_0566 3-oxoacyl-(acyl-carrier-protein) synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Calla_0570 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Calla_0568 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Calla_1836 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Calla_1325 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Calla_0565 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Calla_0394 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Calla_2184 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Calla_0714 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:clc01006] D Calla_0420 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Calla_1472 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Calla_0872 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:clc01007] D Calla_1390 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Calla_0195 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Calla_1710 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Calla_1322 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Calla_0197 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Calla_1825 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Calla_2081 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Calla_0737 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Calla_0865 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Calla_0643 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Calla_0909 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Calla_0351 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Calla_0350 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Calla_0780 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Calla_1724 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Calla_0338 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Calla_1313 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Calla_0719 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Calla_0671 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Calla_0672 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Calla_0540 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Calla_1798 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Calla_0784 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D Calla_1268 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_0847 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Calla_1988 aminotransferase class I and II K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Calla_1496 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Calla_0904 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:clc00194] D Calla_0793 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Calla_0794 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Calla_0795 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Calla_0796 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Calla_0797 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Calla_0798 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Calla_0799 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Calla_0800 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:clc03000] D Calla_2203 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Calla_1752 hypothetical protein K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D Calla_0332 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Calla_2175 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Calla_2011 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Calla_0114 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Calla_2048 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Calla_0209 transcriptional regulator, GntR family with LacI sensor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D Calla_0981 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Calla_2190 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Calla_0374 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D Calla_0044 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D Calla_0580 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Calla_1128 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Calla_1968 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Calla_2075 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Calla_2138 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Calla_0308 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Calla_1744 Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor D Calla_1959 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor D Calla_1033 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Calla_1172 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Calla_2177 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Calla_0422 stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Calla_2476 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Calla_2480 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Calla_0634 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Calla_1398 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator D Calla_0722 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Calla_0971 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Calla_1487 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D Calla_0778 transcriptional regulator, DeoR family K05311 cggR; central glycolytic genes regulator D Calla_0651 tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D Calla_0753 Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Calla_0884 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR D Calla_1346 Protein mraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:clc03021] D Calla_1130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Calla_1310 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Calla_1309 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Calla_0453 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Calla_1565 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Calla_1115 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Calla_0222 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Calla_0226 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily K03090 sigB; RNA polymerase sigma-B factor D Calla_1093 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Calla_1326 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Calla_1327 RNA polymerase, sigma 28 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Calla_1830 RNA polymerase, sigma-24 subunit, SigH, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor D Calla_1926 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Calla_0466 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Calla_0417 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Calla_0950 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Calla_0679 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Calla_2474 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Calla_0224 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Calla_0038 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Calla_0225 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Calla_1790 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Calla_0910 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Calla_0480 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:clc03019] D Calla_1911 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Calla_0571 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Calla_1771 Ribocuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D Calla_0408 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Calla_1880 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Calla_1016 DEAD/DEAH box helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Calla_0774 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Calla_0474 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Calla_0480 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Calla_0653 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Calla_0969 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Calla_2388 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Calla_1919 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Calla_0871 Protein hfq K03666 hfq; host factor-I protein D Calla_1082 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Calla_2070 UPF0042 nucleotide-binding protein yhbJ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:clc03011] D Calla_1476 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Calla_1152 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Calla_1131 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Calla_1141 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Calla_1868 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Calla_1306 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Calla_1144 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Calla_1859 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Calla_1159 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Calla_1132 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Calla_1307 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Calla_1133 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Calla_1145 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Calla_0473 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Calla_1378 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Calla_1149 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Calla_1866 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Calla_1154 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Calla_1555 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Calla_0656 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Calla_0948 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Calla_1155 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Calla_1158 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Calla_1157 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Calla_1146 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Calla_1143 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Calla_1715 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Calla_0947 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Calla_0949 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Calla_0946 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Calla_1860 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Calla_1148 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Calla_1140 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Calla_1151 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Calla_1129 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Calla_1142 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Calla_1374 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Calla_0594 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Calla_0528 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Calla_1153 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Calla_1156 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Calla_1147 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Calla_0530 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Calla_1983 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Calla_1150 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Calla_0486 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Calla_0647 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Calla_0952 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Calla_2488 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Calla_0593 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Calla_1134 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Calla_0636 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Calla_1308 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Calla_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Calla_R0049 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Calla_R0046 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Calla_R0048 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0051 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Calla_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Calla_R0050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:clc03009] D Calla_0571 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Calla_0782 GTP-binding protein Era-like-protein K03595 era; GTPase D Calla_0531 GTPase obg K03979 obgE; GTPase [EC:3.6.5.-] D Calla_0466 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Calla_0417 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Calla_0950 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Calla_0608 pseudouridine synthase Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Calla_2021 Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Calla_0459 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Calla_0614 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Calla_0966 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Calla_2481 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Calla_1345 Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Calla_2178 Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Calla_0677 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Calla_1832 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Calla_0495 Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Calla_0606 RNA cap guanine-N2 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Calla_0460 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Calla_0251 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Calla_0963 pseudouridine synthase Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Calla_0975 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Calla_0752 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Calla_0783 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Calla_0235 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Calla_1376 Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM D Calla_1361 Ribosomal protein S12 methylthiotransferase rimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Calla_0967 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Calla_1911 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Calla_0599 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Calla_1838 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Calla_0463 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Calla_0393 GTP-binding protein engA K03977 engA; GTPase D Calla_1371 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D Calla_1303 GTP-binding proten HflX K03665 hflX; GTPase D Calla_0493 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Calla_1584 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Calla_0469 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Calla_0465 Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP D Calla_0642 iojap-like protein K09710 ybeB; ribosome-associated protein D Calla_0662 metalloprotease ybeY K07042 ybeY; probable rRNA maturation factor D Calla_0533 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Calla_1877 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Calla_1043 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Calla_0646 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:clc03016] D Calla_1123 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Calla_1390 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Calla_0338 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Calla_0737 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Calla_0643 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Calla_2081 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Calla_1825 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Calla_0909 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Calla_0351 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Calla_0719 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Calla_0780 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Calla_1313 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Calla_1724 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Calla_0197 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Calla_0865 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Calla_0350 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Calla_0671 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Calla_0672 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Calla_1710 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Calla_1322 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Calla_1583 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Calla_0720 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Calla_0147 tRNA methyltransferase complex GCD14 subunit K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Calla_1098 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Calla_0471 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Calla_1980 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Calla_1127 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_0965 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_0493 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Calla_0872 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Calla_2483 tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Calla_2482 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Calla_2487 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Calla_R0011 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Calla_1276 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Calla_1056 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Calla_0195 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Calla_0037 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Calla_1791 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Calla_0074 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Calla_0875 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Calla_0670 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Calla_1962 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Calla_1375 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Calla_1028 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Calla_1915 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Calla_2179 O-methyltransferase-like protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Calla_0595 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Calla_1125 tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Calla_2160 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Calla_2249 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Calla_1171 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Calla_2110 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Calla_2164 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Calla_0229 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Calla_2159 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Calla_2378 NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Calla_1854 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Calla_0527 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Calla_2029 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Calla_0964 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Calla_1758 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Calla_0234 universal protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Calla_1492 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Calla_0233 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Calla_0834 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Calla_0620 UPF0348 protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Calla_1880 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Calla_0474 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:clc03012] D Calla_0468 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Calla_0592 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Calla_1475 Elongation factor Ts K02357 tsf; elongation factor Ts D Calla_1304 translation elongation factor Tu K02358 tuf; elongation factor Tu D Calla_1490 translation elongation factor G K02355 fusA; elongation factor G D Calla_1305 translation elongation factor G K02355 fusA; elongation factor G D Calla_0489 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Calla_1473 Ribosome-recycling factor K02838 frr; ribosome recycling factor D Calla_0488 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Calla_1761 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Calla_1135 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Calla_1910 Elongation factor P K02356 efp; elongation factor P D Calla_1875 hypothetical protein K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:clc03110] D Calla_0882 AAA ATPase central domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Calla_1484 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Calla_1568 ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Calla_1960 ATP-dependent hsl protease ATP-binding subunit hslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Calla_0969 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Calla_2388 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Calla_1919 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Calla_0968 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D Calla_0790 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D Calla_0397 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33 D Calla_0970 Protein grpE K03687 GRPE; molecular chaperone GrpE D Calla_0883 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Calla_1920 10 kDa chaperonin K04078 groES; chaperonin GroES D Calla_0824 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Calla_1424 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Calla_1756 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Calla_0800 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Calla_0506 hydrogenase nickel incorporation protein hypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Calla_0507 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Calla_1886 peptidase S8 and S53 subtilisin kexin sedolisin K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D Calla_0444 peptidase S8 and S53 subtilisin kexin sedolisin K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D Calla_1759 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Calla_2308 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Calla_1034 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:clc04131] D Calla_0777 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Calla_0654 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:clc03032] D Calla_0728 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Calla_1750 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Calla_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D Calla_0243 DnaB domain protein helicase domain protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Calla_1714 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Calla_1835 AAA ATPase K02315 dnaC; DNA replication protein DnaC D Calla_1566 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Calla_1867 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Calla_0650 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Calla_1466 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Calla_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Calla_1556 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Calla_1205 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Calla_1879 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Calla_1370 ribonuclease HII/HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Calla_0811 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Calla_1026 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Calla_1008 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Calla_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Calla_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Calla_1963 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Calla_0542 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:clc03036] D Calla_0571 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Calla_1750 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Calla_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D Calla_0871 Protein hfq K03666 hfq; host factor-I protein D Calla_0578 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Calla_1321 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D Calla_1320 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Calla_1746 Septum formation initiator K13052 divIC; cell division protein DivIC D Calla_1461 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Calla_1364 cell division FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Calla_1344 Septum formation initiator K03586 ftsL; cell division protein FtsL D Calla_1335 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Calla_1338 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Calla_1460 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Calla_1332 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Calla_0213 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Calla_0219 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Calla_0481 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Calla_0498 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Calla_0693 septum site-determining protein minC K03610 minC; septum site-determining protein MinC D Calla_0694 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Calla_0695 Cell division topological specificity factor K03608 minE; cell division topological specificity factor D Calla_0736 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein D Calla_0733 Cell division protein sepF K09772 sepF; cell division inhibitor SepF D Calla_0078 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Calla_0689 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Calla_0690 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Calla_0696 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Calla_2477 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Calla_2476 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Calla_2480 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Calla_2482 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Calla_2481 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Calla_1962 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Calla_2248 integrase family protein K03733 xerC; integrase/recombinase XerC D Calla_0302 integrase family protein K04763 xerD; integrase/recombinase XerD D Calla_1446 Tyrosine recombinase xerC K04763 xerD; integrase/recombinase XerD D Calla_0769 Tyrosine recombinase xerC K04763 xerD; integrase/recombinase XerD D Calla_0149 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Calla_1396 GTP-binding protein engB K03978 engB; GTP-binding protein D Calla_2068 sporulation transcription regulator whiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:clc03400] D Calla_0252 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Calla_0482 8-oxoguanine DNA glycosylase domain-containing protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Calla_0838 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Calla_0788 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Calla_1497 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Calla_1112 Xylose isomerase domain-containing protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Calla_0893 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Calla_1026 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Calla_0811 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Calla_0807 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D Calla_0808 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D Calla_2041 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D Calla_0673 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Calla_2364 LexA repressor K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Calla_1310 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Calla_1309 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Calla_1130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Calla_0453 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Calla_1760 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Calla_0874 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D Calla_1052 MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D Calla_0873 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D Calla_0418 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Calla_0419 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Calla_0650 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Calla_1466 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Calla_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Calla_1556 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Calla_1205 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Calla_1879 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Calla_1867 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Calla_1008 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Calla_2430 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Calla_1358 Protein recA K03553 recA; recombination protein RecA D Calla_0525 Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D Calla_0526 Holliday junction DNA helicase RuvB domain-containing protein K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Calla_0524 Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Calla_0455 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Calla_0553 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Calla_0552 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D Calla_1855 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Calla_0003 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D Calla_0612 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Calla_1315 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Calla_0781 DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O) D Calla_0555 Recombination protein recR K06187 recR; recombination protein RecR D Calla_0723 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Calla_2051 UvrD/REP helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Calla_2052 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Calla_2392 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Calla_2441 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Calla_1623 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Calla_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Calla_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Calla_1963 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Calla_1750 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Calla_1016 DEAD/DEAH box helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Calla_0110 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Calla_0869 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Calla_1357 hypothetical protein K03565 recX; regulatory protein D Calla_0470 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:clc03029] D Calla_0468 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Calla_0592 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Calla_1475 Elongation factor Ts K02357 tsf; elongation factor Ts D Calla_1304 translation elongation factor Tu K02358 tuf; elongation factor Tu D Calla_1490 translation elongation factor G K02355 fusA; elongation factor G D Calla_1305 translation elongation factor G K02355 fusA; elongation factor G D Calla_0782 GTP-binding protein Era-like-protein K03595 era; GTPase D Calla_1710 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Calla_0643 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Calla_0351 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Calla_0780 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Calla_1825 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Calla_1354 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Calla_1353 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Calla_1355 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Calla_0929 DnaB domain-containing protein helicase domain-containing protein K17680 PEO1; twinkle protein [EC:5.6.2.3] D Calla_1867 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Calla_0969 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Calla_2388 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Calla_0970 Protein grpE K03687 GRPE; molecular chaperone GrpE D Calla_1919 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Calla_1920 10 kDa chaperonin K04078 groES; chaperonin GroES D Calla_0968 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D Calla_0790 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D Calla_1127 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_0965 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_0149 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Calla_2485 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:clc02000] D Calla_0943 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Calla_0944 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Calla_2267 hypothetical protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Calla_2266 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Calla_1696 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Calla_1695 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Calla_1246 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Calla_0994 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_2064 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_0400 peptidase C39 bacteriocin processing K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Calla_1188 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Calla_1187 ABC-type transporter, integral membrane subunit K02018 modB; molybdate transport system permease protein D Calla_1289 extracellular solute-binding protein family 1 K05772 tupA; tungstate transport system substrate-binding protein D Calla_1288 ABC-type transporter, integral membrane subunit K05773 tupB; tungstate transport system permease protein D Calla_1287 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Calla_1463 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Calla_2214 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Calla_2218 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Calla_2217 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Calla_1785 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Calla_0357 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Calla_1784 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Calla_1783 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Calla_0115 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein D Calla_0117 ABC-type transporter, integral membrane subunit K10238 thuG; trehalose/maltose transport system permease protein D Calla_0269 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_0090 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_0356 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_1264 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_1841 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_1266 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Calla_0089 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_0270 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_0354 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_1263 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_1843 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein D Calla_1262 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_1842 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_0088 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_0355 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_0271 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein D Calla_0020 monosaccharide-transporting atpase K10543 xylF; D-xylose transport system substrate-binding protein D Calla_2014 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Calla_2167 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Calla_2173 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein D Calla_2013 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein D Calla_2168 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein D Calla_2012 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein D Calla_2172 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein D Calla_0574 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Calla_2478 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Calla_0575 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Calla_0576 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Calla_0853 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Calla_1185 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Calla_0767 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Calla_0766 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein D Calla_0765 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein D Calla_0764 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Calla_0763 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Calla_1577 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Calla_1576 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Calla_1575 ABC transporter related protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Calla_1546 ABC-type transporter, periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Calla_1553 ABC-type transporter, integral membrane subunit K15581 oppB; oligopeptide transport system permease protein D Calla_1550 ABC-type transporter, integral membrane subunit K15582 oppC; oligopeptide transport system permease protein D Calla_1549 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Calla_2094 ABC-type transporter, periplasmic subunit K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Calla_2093 ABC-type transporter, integral membrane subunit K02015 ABC.FEV.P; iron complex transport system permease protein D Calla_2092 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Calla_1529 ABC-type transporter, periplasmic subunit K25034 btuF; cobalamin transport system substrate-binding protein D Calla_1528 ABC-type transporter, integral membrane subunit K25027 btuC; cobalamin transport system permease protein D Calla_1527 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Calla_1970 ABC-type metal ion transporter, periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein D Calla_1972 ABC-type transporter, integral membrane subunit K09816 znuB; zinc transport system permease protein D Calla_1971 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Calla_1738 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D Calla_1737 ABC-type transporter, integral membrane subunit K02008 cbiQ; cobalt/nickel transport system permease protein D Calla_1739 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Calla_1736 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Calla_2428 BioY protein K03523 bioY; biotin transport system substrate-specific component D Calla_1099 ABC-type transporter, integral membrane subunit K16785 ecfT; energy-coupling factor transport system permease protein D Calla_1101 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Calla_1100 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Calla_0031 abc-type na+ efflux pump permease component-like protein K09696 natB; sodium transport system permease protein D Calla_0032 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Calla_0054 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein D Calla_0055 ABC transporter related protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D Calla_0053 ABC-type uncharacterized transport system K25153 gldG; gliding motility-associatede transport system auxiliary component D Calla_0918 ABC-2 type transporter K25181 ybhS; drug efflux transport system permease protein D Calla_0919 ABC transporter related protein K25182 ybhF; drug efflux transport system ATP-binding protein D Calla_0920 secretion protein HlyD family protein K25183 ybhG; membrane fusion protein YbhG D Calla_2275 ABC-2 type transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein D Calla_2274 ABC-2 type transporter K25143 lnrM; linearmycin/streptolysin S transport system permease protein D Calla_2273 ABC transporter related protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D Calla_1460 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Calla_1461 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Calla_1233 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein D Calla_1234 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein D Calla_0072 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Calla_0991 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Calla_2055 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Calla_1120 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Calla_2351 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Calla_0996 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Calla_0069 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_0035 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_0740 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_1119 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_1384 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_2352 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_0071 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_0990 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_1412 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_2054 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Calla_0011 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Calla_0132 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Calla_0028 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Calla_0143 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Calla_2228 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Calla_2261 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Calla_0131 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Calla_0030 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Calla_0142 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Calla_2227 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Calla_2258 ABC transporter related protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Calla_0588 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Calla_2201 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Calla_2067 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Calla_0669 hypothetical protein K02784 ptsH; phosphocarrier protein HPr D Calla_1198 ammonium transporter K03320 amt; ammonium transporter, Amt family D Calla_1858 ammonium transporter K03320 amt; ammonium transporter, Amt family D Calla_0337 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D Calla_1742 MgtE intracellular region K06213 mgtE; magnesium transporter D Calla_0490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Calla_0491 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Calla_0348 CrcB-like protein K06199 crcB; fluoride exporter D Calla_0349 CrcB-like protein K06199 crcB; fluoride exporter D Calla_1588 spore germination protein K06311 yndE; spore germination protein D Calla_0492 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Calla_1037 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Calla_0065 hypothetical protein K03303 lutP; lactate permease D Calla_0151 C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein D Calla_0057 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Calla_2115 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Calla_2112 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Calla_2113 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Calla_0754 uracil-xanthine permease K02824 uraA; uracil permease D Calla_0823 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Calla_1167 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein D Calla_0726 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D Calla_1299 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D Calla_1711 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Calla_0840 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Calla_0093 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Calla_0803 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Calla_0609 hypothetical protein K23675 fmnP; riboflavin transporter D Calla_2354 proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter D Calla_1338 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Calla_2252 iron permease FTR1 K07243 FTR; high-affinity iron transporter D Calla_0398 Pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Calla_0123 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Calla_0120 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Calla_0707 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Calla_0121 sodium pump decarboxylase gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D Calla_0704 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Calla_0122 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Calla_0706 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Calla_1532 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Calla_0993 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D Calla_2063 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D Calla_0983 FeoA family protein K04758 feoA; ferrous iron transport protein A D Calla_0982 small GTP-binding protein K04759 feoB; ferrous iron transport protein B D Calla_1840 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:clc02044] D Calla_1515 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Calla_1516 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Calla_1517 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Calla_1520 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Calla_1518 Type II secretion system F domain-containing protein K02653 pilC; type IV pilus assembly protein PilC D Calla_1511 tfp pilus assembly protein atpase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM D Calla_1510 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Calla_1519 twitching motility protein K02669 pilT; twitching motility protein PilT D Calla_0734 protein of unknown function YGGT K02221 yggT; YggT family protein D Calla_0645 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Calla_1764 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Calla_0624 beta-lactamase domain-containing protein K02238 comEC; competence protein ComEC D Calla_1557 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Calla_1514 Late competence development protein ComFB K02241 comFB; competence protein ComFB D Calla_1935 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Calla_1936 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Calla_1368 type III secretion exporter K04061 flhB2; flagellar biosynthesis protein D Calla_1955 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Calla_1953 h+transporting two-sector atpase B/b' subunit K02411 fliH; flagellar assembly protein FliH D Calla_1952 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Calla_1942 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Calla_1940 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Calla_1939 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Calla_1938 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Calla_1937 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Calla_1876 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Calla_1773 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Calla_0951 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Calla_1772 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Calla_1883 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Calla_1139 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Calla_1379 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Calla_0579 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Calla_2022 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Calla_2485 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:clc02042] C 02022 Two-component system [BR:clc02022] D Calla_0856 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Calla_0857 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Calla_1163 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Calla_2103 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD D Calla_2320 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Calla_2321 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Calla_2095 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Calla_2096 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR D Calla_0826 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Calla_0725 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Calla_1931 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1434 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1941 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_2180 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_1435 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_2086 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Calla_1311 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Calla_0358 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_0272 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_1261 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_1846 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Calla_0021 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_0359 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_0273 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_1845 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_1260 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_1251 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_0091 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Calla_0335 response regulator receiver and ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:clc02035] D Calla_1931 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1434 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Calla_1930 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1433 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1874 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Calla_1916 CheC domain protein K03409 cheX; chemotaxis protein CheX D Calla_1929 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Calla_1928 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Calla_1280 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Calla_2086 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Calla_1311 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Calla_1941 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_2180 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_1435 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Calla_0019 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Calla_2141 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Calla_1953 h+transporting two-sector atpase B/b' subunit K02411 fliH; flagellar assembly protein FliH D Calla_1952 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Calla_1951 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Calla_1940 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Calla_1939 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Calla_1938 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Calla_1937 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Calla_1935 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Calla_1936 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Calla_1954 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Calla_1943 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Calla_1942 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Calla_1955 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Calla_1944 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Calla_1956 Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE D Calla_1958 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Calla_1957 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Calla_1948 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Calla_0079 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Calla_0082 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Calla_0083 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Calla_1946 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Calla_1088 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Calla_1087 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Calla_1074 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D Calla_1080 flagellin domain protein K02406 fliC; flagellin D Calla_1062 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Calla_1061 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Calla_1926 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Calla_0490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Calla_0491 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Calla_1083 Flagellar assembly factor fliW K13626 fliW; flagellar assembly factor FliW D Calla_1090 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Calla_1063 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Calla_1949 flagellar hook-length control protein K02384 flbC; flagellar protein FlbC D Calla_1945 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD D Calla_1934 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D Calla_1933 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Calla_1519 twitching motility protein K02669 pilT; twitching motility protein PilT D Calla_1516 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Calla_1517 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Calla_1520 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Calla_1518 Type II secretion system F domain-containing protein K02653 pilC; type IV pilus assembly protein PilC D Calla_1515 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Calla_1510 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Calla_1511 tfp pilus assembly protein atpase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:clc04812] D Calla_2045 AMMECR1 domain protein K06990 MEMO1; MEMO1 family protein D Calla_0078 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Calla_0689 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Calla_1332 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Calla_0693 septum site-determining protein minC K03610 minC; septum site-determining protein MinC D Calla_0694 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Calla_0695 Cell division topological specificity factor K03608 minE; cell division topological specificity factor D Calla_2477 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Calla_2476 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Calla_2480 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:clc04147] D Calla_0774 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Calla_0777 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Calla_0776 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Calla_0654 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Calla_0539 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Calla_2363 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Calla_1919 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Calla_0969 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Calla_2388 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Calla_1048 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Calla_1304 translation elongation factor Tu K02358 tuf; elongation factor Tu D Calla_0720 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Calla_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Calla_1713 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Calla_1138 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Calla_1585 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Calla_0637 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Calla_0638 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Calla_1392 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Calla_0324 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Calla_1755 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Calla_2479 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Calla_1906 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Calla_0815 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Calla_1020 peptidase M48 Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D Calla_0623 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit C 02048 Prokaryotic defense system [BR:clc02048] D Calla_2392 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Calla_2441 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Calla_1623 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Calla_2442 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Calla_1622 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Calla_2391 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Calla_1626 CRISPR-associated helicase, Cyano-type K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Calla_2394 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Calla_2446 CRISPR-associated HD domain protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Calla_2393 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Calla_2440 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Calla_1625 Protein of unknown function DUF2276 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Calla_2458 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Calla_1245 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Calla_2397 CRISPR-associated protein Csh1 domain protein K19114 csh1; CRISPR-associated protein Csh1 D Calla_2443 CRISPR-associated protein Csh1 domain protein K19114 csh1; CRISPR-associated protein Csh1 D Calla_2396 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2 D Calla_2444 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2 D Calla_2395 CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h D Calla_2445 CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h D Calla_1627 CRISPR-associated protein Csc1 K19120 csc1; CRISPR-associated protein Csc1 D Calla_1628 CRISPR-associated protein Csc2 K19121 csc2; CRISPR-associated protein Csc2 D Calla_1629 metal-dependent phosphohydrolase HD region K19122 csc3; CRISPR-associated protein Csc3 D Calla_2455 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10 D Calla_2414 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1 D Calla_2413 CRISPR-associated protein TM1810 domain protein K19138 csm2; CRISPR-associated protein Csm2 D Calla_2412 CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3 D Calla_2411 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4 D Calla_2410 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5 D Calla_2457 hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2 D Calla_2418 CRISPR-associated protein, MJ1666 family K19143 csx1; CRISPR-associated protein Csx1 D Calla_1727 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Calla_1730 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Calla_1008 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Calla_0300 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Calla_1534 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Calla_1660 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Calla_2143 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Calla_1618 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF D Calla_0189 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Calla_0199 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Calla_1639 cytotoxic translational repressor K06218 relE; mRNA interferase RelE/StbE D Calla_0275 cytotoxic translational repressor K06218 relE; mRNA interferase RelE/StbE D Calla_0198 prevent-host-death family protein K18923 stbD; antitoxin StbD D Calla_1332 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Calla_0078 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Calla_0689 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Calla_1390 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Calla_1127 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Calla_0965 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:clc01504] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:clc00537] D Calla_2479 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Calla_0539 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:clc03100] D Calla_R0029 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Calla_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Calla_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Calla_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Calla_R0052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Calla_R0036 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Calla_R0007 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Calla_R0010 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Calla_R0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Calla_R0043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Calla_R0015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Calla_R0031 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Calla_R0057 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Calla_R0009 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Calla_R0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Calla_R0024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Calla_R0044 tRNA-His K14226 tRNA-His; tRNA His D Calla_R0028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Calla_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0014 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Calla_R0053 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Calla_R0042 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Calla_R0058 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Calla_R0016 tRNA-Met K14230 tRNA-Met; tRNA Met D Calla_R0017 tRNA-Met K14230 tRNA-Met; tRNA Met D Calla_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met D Calla_R0008 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Calla_R0005 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Calla_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Calla_R0056 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Calla_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Calla_R0012 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Calla_R0020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Calla_R0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Calla_R0041 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Calla_R0055 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Calla_R0006 tRNA-Val K14237 tRNA-Val; tRNA Val D Calla_R0025 tRNA-Val K14237 tRNA-Val; tRNA Val D Calla_R0048 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0051 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Calla_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Calla_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Calla_R0050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Calla_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Calla_R0049 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Calla_R0046 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Calla_R0033 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Calla_R0011 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Calla_R0002 ssrA; tmRNA as predicted by Rfam (RF00023), score 208.21 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Calla_2000 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D Calla_0424 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Calla_0425 Pyruvate/ketoisovalerate oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Calla_0879 Pyruvate/ketoisovalerate oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Calla_0805 flavodoxin/nitric oxide synthase K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D Calla_1404 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D Calla_0685 hypothetical protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D Calla_0683 NADH dehydrogenase (ubiquinone) 24 kDa subunit K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3] D Calla_0686 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D Calla_0687 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D Calla_0866 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D Calla_1611 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2] D Calla_1753 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Calla_2044 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Calla_2050 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Calla_1427 RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Calla_0839 GCN5-related N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D Calla_2015 glycoside hydrolase family 65 central catalytic K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D Calla_0268 glycosidase related protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D Calla_0900 glycosidase related protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D Calla_1809 glycosidase related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D Calla_1856 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Calla_1981 protein of unknown function DUF43 K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D Calla_1045 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Calla_1348 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Calla_1995 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Calla_0611 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Calla_2043 Conserved hypothetical protein CHP00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Calla_0168 sugar transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36] D Calla_1094 anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D Calla_2040 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Calla_1485 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Calla_1329 protein of unknown function DUF303 acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D Calla_2327 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Calla_1990 thioesterase superfamily protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Calla_0655 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Calla_2130 protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D Calla_0165 PHP domain protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Calla_1558 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Calla_1523 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Calla_0447 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D Calla_1716 diguanylate cyclase and phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D Calla_0661 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Calla_2080 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Calla_0206 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Calla_1781 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Calla_1331 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Calla_1259 Glycosyl hydrolase 67 middle domain protein K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D Calla_0380 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Calla_0049 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Calla_1847 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Calla_0456 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Calla_0832 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Calla_1330 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Calla_2163 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Calla_0263 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Calla_2349 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Calla_0494 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Calla_1538 YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Calla_2315 type 3a cellulose-binding domain protein K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23] D Calla_1046 Conserved hypothetical protein CHP00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Calla_1044 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Calla_0266 N-acylglucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11] D Calla_0160 lysine 2,3-aminomutase YodO family protein K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9] D Calla_1181 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Calla_0058 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Calla_2076 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Calla_1126 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Calla_1189 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 nifX; nitrogen fixation protein NifX D Calla_1190 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB D Calla_0500 NADH/Ubiquinone/plastoquinone (complex I) K14086 echA; ech hydrogenase subunit A D Calla_0501 respiratory-chain NADH dehydrogenase subunit 1 K14087 echB; ech hydrogenase subunit B D Calla_0502 NADH ubiquinone oxidoreductase 20 kDa subunit K14088 echC; ech hydrogenase subunit C D Calla_0503 NADH dehydrogenase (ubiquinone) 30 kDa subunit K14089 echD; ech hydrogenase subunit D D Calla_0504 NADH-ubiquinone oxidoreductase chain 49kDa K14090 echE; ech hydrogenase subunit E D Calla_0505 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K14091 echF; ech hydrogenase subunit F D Calla_0622 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D Calla_1914 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Calla_0732 protein of unknown function UPF0001 K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Calla_1453 cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D Calla_1025 ABC-1 domain-containing protein K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Calla_0396 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Calla_1195 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1 D Calla_1194 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2 D Calla_0451 UPF0296 protein K09777 remA; extracellular matrix regulatory protein A D Calla_0004 hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D Calla_1745 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein D Calla_0665 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Calla_1486 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator D Calla_1570 Trigger factor K03545 tig; trigger factor D Calla_0262 SsrA-binding protein K03664 smpB; SsrA-binding protein D Calla_0509 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Calla_0510 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Calla_0511 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Calla_0827 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE D Calla_0508 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Calla_1973 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D Calla_1012 protein of unknown function DUF1156 K07445 K07445; putative DNA methylase D Calla_2283 Resolvase domain-containing protein K07450 K07450; putative resolvase D Calla_0325 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Calla_1203 RmuC-domain protein K09760 rmuC; DNA recombination protein RmuC D Calla_1787 HhH-GPD family protein K07457 K07457; endonuclease III related protein D Calla_1015 SMC domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Calla_1367 UPF0102 protein yraN K07460 yraN; putative endonuclease D Calla_1964 DNA protecting protein DprA K04096 smf; DNA processing protein D Calla_0478 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Calla_1681 protein of unknown function DUF927 K06919 K06919; putative DNA primase/helicase D Calla_2146 Integrase catalytic region K07482 K07482; transposase, IS30 family D Calla_2207 Integrase catalytic region K07482 K07482; transposase, IS30 family D Calla_0296 Integrase catalytic region K07482 K07482; transposase, IS30 family D Calla_0100 Integrase catalytic region K07482 K07482; transposase, IS30 family D Calla_0136 Integrase catalytic region K07482 K07482; transposase, IS30 family D Calla_2332 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_0914 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_1551 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_1794 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_1810 hypothetical protein K07486 K07486; transposase D Calla_1811 hypothetical protein K07486 K07486; transposase D Calla_1176 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_2195 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_1372 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_1380 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_1636 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_1637 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_1888 hypothetical protein K07486 K07486; transposase D Calla_1889 hypothetical protein K07486 K07486; transposase D Calla_1692 transposase IS111A/IS1328/IS1533 K07486 K07486; transposase D Calla_1699 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_0573 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_0179 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_0099 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_0107 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_0128 transposase IS111A/IS1328/IS1533 K07486 K07486; transposase D Calla_2296 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_2312 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Calla_0023 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Calla_2491 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Calla_2091 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Calla_2099 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Calla_0915 MULE transposase, conserved domain-containing protein K07493 K07493; putative transposase D Calla_0887 transposase mutator type K07493 K07493; putative transposase D Calla_0304 transposase mutator type K07493 K07493; putative transposase D Calla_0024 transposase, IS605 OrfB family K07496 K07496; putative transposase D Calla_0025 transposase, IS605 OrfB family K07496 K07496; putative transposase D Calla_0534 hypothetical protein K07496 K07496; putative transposase D Calla_2492 transposase, IS605 OrfB family K07496 K07496; putative transposase D Calla_2090 transposase, IS605 OrfB family K07496 K07496; putative transposase D Calla_2098 transposase, IS605 OrfB family K07496 K07496; putative transposase D Calla_1267 Integrase catalytic region K07497 K07497; putative transposase D Calla_0181 Integrase catalytic region K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Calla_2131 phage shock protein A, PspA K03969 pspA; phage shock protein A D Calla_0554 UPF0133 protein ybaB K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth D Calla_2484 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein D Calla_2224 nucleoside recognition domain protein K06373 spmA; spore maturation protein A D Calla_2223 nucleoside recognition domain protein K06374 spmB; spore maturation protein B D Calla_1095 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Calla_2343 protein of unknown function DUF95 transmembrane K06384 spoIIM; stage II sporulation protein M D Calla_1449 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D Calla_1586 Sporulation stage II protein R K06387 spoIIR; stage II sporulation protein R D Calla_0410 AAA ATPase K06390 spoIIIAA; stage III sporulation protein AA D Calla_0411 Sporulation stage III protein AB K06391 spoIIIAB; stage III sporulation protein AB D Calla_0412 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D Calla_1317 hypothetical protein K06401 spoIVFA; stage IV sporulation protein FA D Calla_2435 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D Calla_2436 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D Calla_2437 hypothetical protein K06407 spoVAE; stage V sporulation protein AE D Calla_1366 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K06410 spoVFA; dipicolinate synthase subunit A D Calla_1365 dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B D Calla_0309 SpoVG family protein K06412 spoVG; stage V sporulation protein G D Calla_0577 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Calla_2465 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Calla_0613 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Calla_0876 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Calla_1451 hypothetical protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D Calla_0659 stage IV sporulation YqfD K06438 yqfD; similar to stage IV sporulation protein D Calla_1587 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Calla_1277 Lipoprotein LpqB, GerMN domain-containing protein K06298 gerM; germination protein M D Calla_1589 GerA spore germination protein K06310 yndD; spore germination protein D Calla_1452 germination protein YpeB K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D Calla_0385 GTP-binding protein TypA K06207 typA; GTP-binding protein D Calla_1893 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Calla_0660 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D Calla_0010 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein D Calla_2226 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D Calla_0852 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Calla_0250 hemerythrin-like metal-binding protein K07216 hr; hemerythrin B B 09194 Poorly characterized C 99996 General function prediction only D Calla_1779 hydrolase ycdX K04477 ycdX; putative hydrolase D Calla_1709 MMPL domain protein K06994 K06994; putative drug exporter of the RND superfamily D Calla_0619 Patatin K07001 K07001; NTE family protein D Calla_2259 SufBD protein K09014 sufB; Fe-S cluster assembly protein SufB D Calla_0340 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Calla_2358 LemA family protein K03744 lemA; LemA protein D Calla_1813 SNARE associated protein K03975 dedA; membrane-associated protein D Calla_2192 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein C 99997 Function unknown D Calla_1775 Radical SAM domain protein K06871 K06871; uncharacterized protein D Calla_2357 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Calla_0138 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Calla_1984 alpha/beta fold family hydrolase-like protein K06889 K06889; uncharacterized protein D Calla_2448 ATPase K06921 K06921; uncharacterized protein D Calla_2366 ATPase K06921 K06921; uncharacterized protein D Calla_1006 protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Calla_0431 CoA-binding domain protein K06929 K06929; uncharacterized protein D Calla_0154 UPF0251 protein K06933 K06933; uncharacterized protein D Calla_1377 UPF0109 protein K06960 K06960; uncharacterized protein D Calla_1831 protein of unknown function DUF901 K06962 K06962; uncharacterized protein D Calla_0458 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein D Calla_1243 GCN5-related N-acetyltransferase K06976 K06976; uncharacterized protein D Calla_1573 RNA-metabolising metallo-beta-lactamase K07041 K07041; uncharacterized protein D Calla_1222 amidohydrolase 2 K07045 K07045; uncharacterized protein D Calla_1729 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D Calla_2344 aldo/keto reductase K07079 K07079; uncharacterized protein D Calla_1869 aldo/keto reductase K07079 K07079; uncharacterized protein D Calla_0598 aldo/keto reductase K07079 K07079; uncharacterized protein D Calla_1991 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Calla_1274 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Calla_1220 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein D Calla_1081 AAA family atpase K07133 K07133; uncharacterized protein D Calla_1559 thiamine biosynthesis Thi4 protein K07137 K07137; uncharacterized protein D Calla_0211 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K07138 K07138; uncharacterized protein D Calla_2269 protein of unknown function DUF554 K07150 K07150; uncharacterized protein D Calla_2486 UPF0161 protein yidD K08998 K08998; uncharacterized protein D Calla_2077 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D Calla_0657 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D Calla_0889 UPF0182 protein K09118 K09118; uncharacterized protein D Calla_0768 protein of unknown function DUF1867 K09126 K09126; uncharacterized protein D Calla_0390 protein of unknown function DUF402 K09145 K09145; uncharacterized protein D Calla_1892 UPF0210 protein K09157 K09157; uncharacterized protein D Calla_0139 hypothetical protein K09388 K09388; uncharacterized protein D Calla_2139 protein of unknown function DUF1284 K09706 K09706; uncharacterized protein D Calla_1925 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Calla_0518 Protein of unknown function DUF2225 K09766 K09766; uncharacterized protein D Calla_1206 protein of unknown function DUF327 K09770 K09770; uncharacterized protein D Calla_0674 acid phosphatase/vanadium-dependent haloperoxidase related protein K09775 K09775; uncharacterized protein D Calla_1381 UPF0122 protein K09787 K09787; uncharacterized protein D Calla_1242 protein of unknown function DUF541 K09797 K09797; uncharacterized protein D Calla_0311 protein of unknown function DUF610 YibQ K09798 K09798; uncharacterized protein D Calla_1035 protein of unknown function DUF541 K09807 K09807; uncharacterized protein D Calla_1804 Uncharacterized conserved protein UCP018688 K01163 K01163; uncharacterized protein D Calla_0529 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein D Calla_0854 putative phosphate transport regulator K07220 K07220; uncharacterized protein D Calla_0467 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024