+D #

  Transfer RNA Biogenesis - Campylobacter lari NCTC 11845

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors C CCA adding factors D UPTC3659_1220 cca; multifunctional tRNA nucleotidyl transferase / 2'3'-cyclic phosphodiesterase / 2' nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D UPTC3659_1516 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D UPTC3659_0886 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D UPTC3659_1378 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D UPTC3659_1257 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D UPTC3659_0831 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D UPTC3659_1302 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D UPTC3659_0516 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D UPTC3659_0745 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D UPTC3659_1285 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D UPTC3659_0033 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D UPTC3659_0565 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D UPTC3659_0726 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D UPTC3659_0741 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D UPTC3659_0862 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D UPTC3659_1423 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D UPTC3659_1422 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D UPTC3659_0712 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D UPTC3659_0566 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors C AARS associated factors D UPTC3659_1424 PKCI-related HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D UPTC3659_0705 trmI; tRNA m7G46 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] C Psudouridine synthases D UPTC3659_1187 truA; tRNA pseudouridine synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D UPTC3659_1269 truB; tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D UPTC3659_0422 truD; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors D UPTC3659_1695 iscS; cysteine desulfurase/aminotransferase (IscS/NifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D UPTC3659_1643 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D UPTC3659_0580 mnmE; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D UPTC3659_1314 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D UPTC3659_0378 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors D UPTC3659_0176 cysQ; adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D UPTC3659_0584 rnpA; ribonuclease P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D UPTC3659_0878 rnpB; ribonuclease P, RNA component K01978 rnpB; M1 RNA B 3'processing and CCA adding factors C 3'processing factors C CCA adding factors D UPTC3659_1220 cca; multifunctional tRNA nucleotidyl transferase / 2'3'-cyclic phosphodiesterase / 2' nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors B tRNA transport factors C tRNA export factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D UPTC3659_1257 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D UPTC3659_0886 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D UPTC3659_0712 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D UPTC3659_0566 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D UPTC3659_0033 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D UPTC3659_1378 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D UPTC3659_0516 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D UPTC3659_1285 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D UPTC3659_0741 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D UPTC3659_0831 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D UPTC3659_0565 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D UPTC3659_0745 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D UPTC3659_1213 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D UPTC3659_0695 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D UPTC3659_0726 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D UPTC3659_1516 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D UPTC3659_1302 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D UPTC3659_1423 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D UPTC3659_1422 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D UPTC3659_0862 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D UPTC3659_0824 gltX1; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] C Trans-editing factors B tRNA modification factors C Deaminases C Dihydorouridine synthases D UPTC3659_0227 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] C Methylthiotransferases D UPTC3659_0343 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] C Methyltransferases D UPTC3659_0775 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D UPTC3659_0601 cmoB; tRNA (cmo5U34)-carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D UPTC3659_1181 trmA; tRNA m5U54 methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D UPTC3659_0705 trmI; tRNA m7G46 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D UPTC3659_1204 trmD; tRNA m1G37 methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D UPTC3659_0580 mnmE; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D UPTC3659_0691 rRNA methylase, SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D UPTC3659_1134 tRNA m6A37 methyltransferase TrmN6 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] C Psudouridine synthases D UPTC3659_1187 truA; tRNA pseudouridine synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D UPTC3659_1269 truB; tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D UPTC3659_0422 truD; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors D UPTC3659_1707 putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D UPTC3659_0257 mnmA; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D UPTC3659_0223 adenine nucleotide alpha hydrolase, possible tRNA 2-thiocytidine biosynthesis protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D UPTC3659_1695 iscS; cysteine desulfurase/aminotransferase (IscS/NifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Other tRNA modification factors D UPTC3659_1314 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D UPTC3659_1643 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D UPTC3659_0715 mnmC; bifunctional 5-methylaminomethyl-2-thiouridine-forming methyltransferase / FAD-dependent demodification enzyme K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D UPTC3659_0758 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D UPTC3659_0835 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D UPTC3659_1637 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D UPTC3659_1638 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D UPTC3659_0011 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D UPTC3659_1615 hypothetical protein (DUF208 domain) K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D UPTC3659_0378 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D UPTC3659_1139 ybbB; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D UPTC3659_0620 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D UPTC3659_0277 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D UPTC3659_0236 tsaB; N6-L-threonylcarbamoyladenine synthase, TsaB subunit K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D UPTC3659_1744 tsaD; N6-L-threonylcarbamoyladenine synthase, TsaD subunit K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D UPTC3659_0869 tsaE; N6-L-threonylcarbamoyladenine synthase, TsaE subunit K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D UPTC3659_1593 dinucleotide-utilizing enzyme, molybdopterin/thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase B tRNA degradation factors C UPTC3659_1162 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C UPTC3659_0537 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024