+D GENES KO
#
KEGG Orthology (KO) - Mageeibacillus indolicus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:clo00010]
D HMPREF0868_0827 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0868_1133 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0868_0847 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HMPREF0868_0441 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0868_0610 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0868_1493 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0868_0016 glyceraldehyde-3-phosphate dehydrogenase, type II K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D HMPREF0868_0015 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0868_0988 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0868_1604 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0868_0757 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0868_1481 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HMPREF0868_0613 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HMPREF0868_0218 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0868_0538 alcohol dehydrogenase, iron-dependent K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0868_0273 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF0868_0620 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0355 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:clo00020]
D HMPREF0868_0385 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HMPREF0868_0613 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:clo00030]
D HMPREF0868_0827 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0868_1147 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF0868_0013 Transketolase, C-terminal domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF0868_0014 Transketolase, thiamine diphosphate binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF0868_1449 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF0868_0656 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HMPREF0868_0263 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF0868_0620 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0355 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0898 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0868_0899 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0868_0441 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0868_1133 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0868_0847 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:clo00040]
D HMPREF0868_1147 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF0868_0277 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D HMPREF0868_0276 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:clo00051]
D HMPREF0868_0814 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF0868_1133 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0868_0847 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HMPREF0868_0276 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D HMPREF0868_0441 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0868_0610 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
C 00052 Galactose metabolism [PATH:clo00052]
D HMPREF0868_0273 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF0868_1503 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0868_0620 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0355 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_1133 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0868_0847 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:clo00500]
D HMPREF0868_0311 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF0868_0312 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF0868_0786 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF0868_0787 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF0868_0788 glgA; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D HMPREF0868_0785 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF0868_0559 glgP; phosphorylase, glycogen/starch/alpha-glucan family K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HMPREF0868_1598 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D HMPREF0868_0180 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D HMPREF0868_0185 alpha amylase, catalytic domain protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D HMPREF0868_1241 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HMPREF0868_0813 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D HMPREF0868_0620 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0355 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0827 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0868_0814 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:clo00520]
D HMPREF0868_0504 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HMPREF0868_0576 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HMPREF0868_0814 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF0868_1452 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HMPREF0868_1608 putative bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF0868_0419 bacterial transferase hexapeptide repeat protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF0868_1280 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0868_1263 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0868_0510 N-acylglucosamine 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D HMPREF0868_0505 putative N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D HMPREF0868_1600 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HMPREF0868_0599 oxidoreductase, NAD-binding domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D HMPREF0868_0620 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0355 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_1503 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0868_0827 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0868_0786 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF0868_0787 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:clo00620]
D HMPREF0868_0613 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HMPREF0868_0894 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF0868_0538 alcohol dehydrogenase, iron-dependent K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0868_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF0868_1317 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0868_0757 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0868_0218 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0868_0480 metallo-beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HMPREF0868_1179 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D HMPREF0868_0017 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D HMPREF0868_0752 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HMPREF0868_0385 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HMPREF0868_1481 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00630 Glyoxylate and dicarboxylate metabolism
D HMPREF0868_0685 HAD hydrolase, family IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
C 00640 Propanoate metabolism [PATH:clo00640]
D HMPREF0868_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF0868_1317 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0868_0894 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF0868_0218 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0868_1098 putative methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:clo00650]
D HMPREF0868_1448 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D HMPREF0868_0538 alcohol dehydrogenase, iron-dependent K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0868_0894 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF0868_0613 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HMPREF0868_1158 aDH; NADP-dependent alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
C 00660 C5-Branched dibasic acid metabolism
D HMPREF0868_0826 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:clo00562]
D HMPREF0868_0647 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF0868_0020 oxidoreductase, NAD-binding domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HMPREF0868_0021 oxidoreductase, NAD-binding domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HMPREF0868_0019 AP endonuclease, family 2 K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D HMPREF0868_0023 thiamine pyrophosphate enzyme, central domain protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D HMPREF0868_0012 myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D HMPREF0868_0610 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:clo00190]
D HMPREF0868_1121 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF0868_1119 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF0868_1120 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF0868_1118 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF0868_1124 putative ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF0868_1122 ATP synthase B/B' CF(0) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF0868_1123 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF0868_1429 ATP synthase ab domain protein K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D HMPREF0868_1428 ATP synthase ab domain protein K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D HMPREF0868_1431 hypothetical protein K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D HMPREF0868_1427 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D HMPREF0868_1430 ATP synthase, subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D HMPREF0868_1435 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D HMPREF0868_1434 atpI; V-type sodium ATPase, I subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D HMPREF0868_1433 V-type sodium ATPase, K subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D HMPREF0868_0390 CBS domain protein K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:clo00710]
D HMPREF0868_0015 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0868_0610 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0868_1493 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0868_0016 glyceraldehyde-3-phosphate dehydrogenase, type II K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D HMPREF0868_0441 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0868_0013 Transketolase, C-terminal domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF0868_0014 Transketolase, thiamine diphosphate binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF0868_1449 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF0868_1147 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF0868_1481 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:clo00720]
D HMPREF0868_0613 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HMPREF0868_1481 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HMPREF0868_0385 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HMPREF0868_0768 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF0868_0629 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF0868_1317 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0868_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:clo00680]
D HMPREF0868_1604 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0868_0441 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0868_1133 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0868_0847 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HMPREF0868_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF0868_1317 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0868_0988 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:clo00910]
D HMPREF0868_0212 putative nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D HMPREF0868_1324 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HMPREF0868_0361 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D HMPREF0868_1586 putative taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D HMPREF0868_1587 ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D HMPREF0868_1585 ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:clo00061]
D HMPREF0868_0637 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF0868_1228 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0868_0880 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0868_0391 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_1128 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0217 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0281 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:clo00071]
D HMPREF0868_0391 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_1128 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0217 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0281 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0538 alcohol dehydrogenase, iron-dependent K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D HMPREF0868_0617 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HMPREF0868_0637 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:clo00561]
D HMPREF0868_1138 dhaK; dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D HMPREF0868_1137 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D HMPREF0868_0596 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HMPREF0868_1381 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0868_1043 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:clo00564]
D HMPREF0868_0661 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HMPREF0868_1480 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HMPREF0868_1381 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0868_1043 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0868_0055 hydrolase, alpha/beta domain protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D HMPREF0868_0541 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HMPREF0868_0940 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HMPREF0868_0758 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HMPREF0868_0759 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D HMPREF0868_0635 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HMPREF0868_1132 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D HMPREF0868_1162 GDSL-like protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:clo00230]
D HMPREF0868_0627 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HMPREF0868_0620 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0355 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0898 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0868_0899 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0868_0622 phosphoribosyl transferase domain protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF0868_0660 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF0868_0902 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HMPREF0868_0954 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF0868_0792 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HMPREF0868_1085 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HMPREF0868_1086 hydrolase, NUDIX family K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D HMPREF0868_1066 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0868_1075 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0868_1484 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HMPREF0868_0098 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0868_0099 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF0868_0531 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF0868_0101 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D HMPREF0868_0496 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D HMPREF0868_1337 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF0868_0400 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D HMPREF0868_0658 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D HMPREF0868_0962 putative metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D HMPREF0868_1519 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF0868_0361 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:clo00240]
D HMPREF0868_0395 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF0868_0394 pyrI; aspartate carbamoyltransferase regulatory chain, allosteric domain protein K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D HMPREF0868_0714 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HMPREF0868_0716 pyrD; dihydroorotate oxidase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HMPREF0868_0715 dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D HMPREF0868_0718 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HMPREF0868_0717 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HMPREF0868_0943 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HMPREF0868_0543 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HMPREF0868_1086 hydrolase, NUDIX family K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D HMPREF0868_1044 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HMPREF0868_1602 phosphoribulokinase/uridine kinase family protein K00876 udk; uridine kinase [EC:2.7.1.48]
D HMPREF0868_0270 putative purine nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D HMPREF0868_0709 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF0868_0962 putative metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D HMPREF0868_0655 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D HMPREF0868_0651 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HMPREF0868_0531 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF0868_0098 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0868_0099 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF0868_0496 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D HMPREF0868_0032 cytidine and deoxycytidylate deaminase zinc-binding region K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HMPREF0868_1015 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HMPREF0868_1306 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF0868_0186 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HMPREF0868_0802 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:clo00250]
D HMPREF0868_0404 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HMPREF0868_1563 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HMPREF0868_0403 putative aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D HMPREF0868_0395 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF0868_0394 pyrI; aspartate carbamoyltransferase regulatory chain, allosteric domain protein K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D HMPREF0868_1324 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00260 Glycine, serine and threonine metabolism [PATH:clo00260]
D HMPREF0868_0971 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0868_0888 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0868_0499 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF0868_0474 Beta-eliminating lyase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D HMPREF0868_0988 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0868_1615 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D HMPREF0868_0758 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HMPREF0868_0578 sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF0868_0579 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF0868_0667 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
C 00270 Cysteine and methionine metabolism [PATH:clo00270]
D HMPREF0868_0274 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0868_0214 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0868_0575 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0868_0740 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HMPREF0868_0003 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HMPREF0868_0007 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HMPREF0868_1159 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HMPREF0868_1027 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D HMPREF0868_1647 hypothetical protein K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D HMPREF0868_0971 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0868_0888 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0868_0218 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0868_0578 sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF0868_0579 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation
D HMPREF0868_1051 phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:clo00290]
D HMPREF0868_0826 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00300 Lysine biosynthesis [PATH:clo00300]
D HMPREF0868_0971 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0868_0888 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0868_1041 putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF0868_0443 aminotransferase, class I/II K00841 patA; aminotransferase [EC:2.6.1.-]
D HMPREF0868_0484 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF0868_0338 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
C 00220 Arginine biosynthesis [PATH:clo00220]
D HMPREF0868_0360 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HMPREF0868_0678 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D HMPREF0868_0361 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism [PATH:clo00330]
D HMPREF0868_0004 Orn/Lys/Arg decarboxylase, major domain protein K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D HMPREF0868_0008 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D HMPREF0868_0009 LYS1; saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D HMPREF0868_0010 nspC; carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D HMPREF0868_0007 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HMPREF0868_0003 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HMPREF0868_0126 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D HMPREF0868_0978 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D HMPREF0868_0538 alcohol dehydrogenase, iron-dependent K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:clo00360]
D HMPREF0868_0256 hypothetical protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D HMPREF0868_1448 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00380 Tryptophan metabolism
D HMPREF0868_1596 Beta-eliminating lyase K01667 tnaA; tryptophanase [EC:4.1.99.1]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:clo00430]
D HMPREF0868_1317 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0868_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:clo00450]
D HMPREF0868_0274 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0868_0214 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0868_0575 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0868_0369 sufS; cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HMPREF0868_1363 putative thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HMPREF0868_1625 pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HMPREF0868_1505 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:clo00460]
D HMPREF0868_0311 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF0868_0312 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF0868_0404 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HMPREF0868_1563 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:clo00470]
D HMPREF0868_1561 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0868_0353 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0868_0667 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
C 00480 Glutathione metabolism [PATH:clo00480]
D HMPREF0868_1627 peptidase family M1 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF0868_0574 pepD; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HMPREF0868_1058 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D HMPREF0868_0007 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D HMPREF0868_1078 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:clo00541]
D HMPREF0868_1503 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0868_0708 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF0868_1608 putative bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF0868_0419 bacterial transferase hexapeptide repeat protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF0868_1600 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HMPREF0868_0599 oxidoreductase, NAD-binding domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
C 00550 Peptidoglycan biosynthesis [PATH:clo00550]
D HMPREF0868_1280 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0868_1263 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0868_0900 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF0868_0484 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF0868_0353 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0868_0338 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF0868_0941 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF0868_0401 putative undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0868_0339 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0868_0341 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF0868_0031 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF0868_0337 penicillin-binding protein, transpeptidase domain protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D HMPREF0868_0607 penicillin-binding protein, transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D HMPREF0868_0383 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF0868_1346 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0868_0878 Mur ligase middle domain protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF0868_0879 CobB/CobQ-like protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF0868_0292 FemAB family protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
C 00552 Teichoic acid biosynthesis [PATH:clo00552]
D HMPREF0868_0401 putative undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0868_1601 glycosyltransferase, group 1 family protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D HMPREF0868_0832 cell envelope-like function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:clo00730]
D HMPREF0868_1105 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HMPREF0868_0736 putative thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D HMPREF0868_1163 putative cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_1166 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_1165 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HMPREF0868_0738 thiH; thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D HMPREF0868_1232 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HMPREF0868_0737 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D HMPREF0868_1413 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF0868_1412 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HMPREF0868_1148 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HMPREF0868_1146 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D HMPREF0868_1519 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:clo00740]
D HMPREF0868_1413 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF0868_0627 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:clo00750]
D HMPREF0868_0502 thiD; phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HMPREF0868_0499 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF0868_0964 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:clo00760]
D HMPREF0868_1507 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HMPREF0868_0660 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF0868_0799 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HMPREF0868_0428 nadE; NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D HMPREF0868_0202 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D HMPREF0868_1231 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:clo00770]
D HMPREF0868_0402 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HMPREF0868_0650 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HMPREF0868_0351 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HMPREF0868_0854 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HMPREF0868_0617 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:clo00780]
D HMPREF0868_1228 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0868_0880 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:clo00790]
D HMPREF0868_0803 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF0868_0498 folC; bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:clo00670]
D HMPREF0868_0803 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF0868_0768 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF0868_0629 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF0868_0933 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF0868_0802 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:clo00860]
D HMPREF0868_0766 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0868_1440 putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:clo00900]
D HMPREF0868_1232 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HMPREF0868_0939 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HMPREF0868_0720 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D HMPREF0868_1298 putative 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HMPREF0868_0731 YgbB family K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D HMPREF0868_0937 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HMPREF0868_1042 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF0868_1233 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF0868_0941 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HMPREF0868_0013 Transketolase, C-terminal domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF0868_0014 Transketolase, thiamine diphosphate binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D HMPREF0868_0708 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:clo00946]
D HMPREF0868_0311 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF0868_0312 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HMPREF0868_0983 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HMPREF0868_1383 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:clo00261]
D HMPREF0868_0971 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0868_0888 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:clo00521]
D HMPREF0868_0620 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0355 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0868_0647 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF0868_0020 oxidoreductase, NAD-binding domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HMPREF0868_0021 oxidoreductase, NAD-binding domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HMPREF0868_0708 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D HMPREF0868_0708 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D HMPREF0868_1228 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0868_0880 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HMPREF0868_0637 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:clo00999]
D HMPREF0868_0740 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HMPREF0868_0311 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF0868_0312 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D HMPREF0868_1448 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:clo00625]
D HMPREF0868_0538 alcohol dehydrogenase, iron-dependent K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0868_0212 putative nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:clo00626]
D HMPREF0868_0538 alcohol dehydrogenase, iron-dependent K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:clo03020]
D HMPREF0868_0195 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0868_0196 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0868_1512 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0868_1483 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D HMPREF0868_0955 DEAD2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:clo03010]
D HMPREF0868_1042 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF0868_0945 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF0868_1534 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF0868_0873 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF0868_1523 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF0868_1386 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF0868_1247 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF0868_1526 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF0868_1006 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF0868_1541 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF0868_1513 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF0868_1248 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF0868_1514 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF0868_1527 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF0868_0874 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF0868_1175 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF0868_1531 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF0868_1384 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF0868_1536 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF0868_1321 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF0868_1339 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HMPREF0868_1274 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF0868_1537 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF0868_1540 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF0868_1539 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF0868_1528 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF0868_1525 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF0868_1272 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF0868_0905 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF0868_1273 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF0868_1275 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF0868_1007 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF0868_1530 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF0868_1521 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF0868_1533 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF0868_1511 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF0868_1524 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF0868_1171 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF0868_1313 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF0868_0688 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF0868_1535 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF0868_1538 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF0868_1529 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF0868_0690 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF0868_1532 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF0868_1522 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF0868_1399 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF0868_0453 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF0868_1297 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF0868_1314 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF0868_1515 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF0868_1286 rrs_2; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0868_1476 rrs_1; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0868_1284 rrl_2; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0868_1474 rrl_1; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0868_1283 rrf_2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0868_1473 rrf_1; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:clo00970]
D HMPREF0868_1115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0868_1564 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0868_1285 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0868_0513 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0868_0977 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0868_0748 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0868_0432 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0868_1472 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF0868_1500 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF0868_1266 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF0868_0908 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0868_0440 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0868_1311 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0868_1268 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0868_0701 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0868_1267 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0868_0976 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0868_0909 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF0868_1475 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF0868_1090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_0464 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_1053 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_0922 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_1034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_0907 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0868_0804 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0868_1269 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0868_1155 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0868_1033 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0868_1499 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF0868_1031 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0868_0876 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0868_1099 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0868_1621 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0868_0556 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0868_1620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0868_1369 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0868_1368 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0868_1404 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0868_0680 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0868_0623 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF0868_1156 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF0868_1501 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0868_0062 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0868_0995 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0868_0766 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0868_0765 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HMPREF0868_1344 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0868_0435 threonine/alanine tRNA ligase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0868_0725 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0868_0891 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF0868_1482 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF0868_0536 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0868_1259 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0868_0743 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0868_1505 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0868_0933 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF0868_0649 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0868_1403 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0868_1048 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0868_0952 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0868_0789 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0868_0447 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0868_0724 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0868_1096 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0868_1095 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0868_1319 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0868_0625 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:clo03060]
D HMPREF0868_1520 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0868_1277 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0868_0051 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0868_0967 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HMPREF0868_0966 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HMPREF0868_0865 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0868_1294 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0868_1091 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0868_1176 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0868_1018 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF0868_0646 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0868_0727 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0868_0819 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0868_0726 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0868_0961 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:clo04122]
D HMPREF0868_1163 putative cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_1166 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_0881 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HMPREF0868_1165 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HMPREF0868_0735 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D HMPREF0868_0736 putative thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:clo03018]
D HMPREF0868_1604 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0868_0875 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF0868_0049 putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF0868_1400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HMPREF0868_0963 YmdA/YtgF family protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HMPREF0868_1328 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF0868_1133 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0868_0779 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0868_0834 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:clo03030]
D HMPREF0868_0621 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0868_0936 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0868_1019 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0868_1013 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0868_0895 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0868_0092 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0868_0904 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF0868_0867 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF0868_1385 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0868_0626 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HMPREF0868_1169 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF0868_0666 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:clo03410]
D HMPREF0868_0348 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF0868_1465 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF0868_0704 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF0868_0722 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF0868_1338 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF0868_0666 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:clo03420]
D HMPREF0868_0408 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0868_1310 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF0868_0619 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF0868_1001 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF0868_0495 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0868_0666 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF0868_0955 DEAD2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:clo03430]
D HMPREF0868_0883 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HMPREF0868_1131 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D HMPREF0868_0884 mutL; DNA mismatch repair domain protein K03572 mutL; DNA mismatch repair protein MutL
D HMPREF0868_0495 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0868_1235 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF0868_1234 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF0868_1338 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF0868_1385 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0868_0621 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0868_0936 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0868_0092 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0868_1019 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0868_0895 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0868_1013 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0868_0666 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:clo03440]
D HMPREF0868_1338 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF0868_1385 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0868_0091 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF0868_0956 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF0868_1021 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF0868_0632 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF0868_0917 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF0868_0916 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF0868_0918 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HMPREF0868_0349 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF0868_0115 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF0868_0621 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0868_0936 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0868_0092 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0868_1019 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0868_0895 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0868_1013 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0868_0935 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:clo02010]
D HMPREF0868_1586 putative taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D HMPREF0868_1587 ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D HMPREF0868_1585 ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D HMPREF0868_0287 ABC transporter, solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF0868_0299 ABC transporter, solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF0868_0284 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF0868_0285 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D HMPREF0868_0301 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D HMPREF0868_0300 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HMPREF0868_0286 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HMPREF0868_0503 Phycoerythrin, alpha/beta chain K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF0868_0181 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF0868_0182 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0868_0183 ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0868_0657 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF0868_0264 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF0868_0653 branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF0868_0266 branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF0868_0267 branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HMPREF0868_0654 branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HMPREF0868_0652 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF0868_0265 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF0868_0025 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF0868_0027 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF0868_0026 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF0868_0080 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0868_0079 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF0868_0078 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF0868_0077 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF0868_1036 ABC transporter, substrate-binding protein, family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D HMPREF0868_1037 ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D HMPREF0868_1038 ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0868_1419 ABC transporter, substrate-binding protein, family 3 K17073 lysX1; putative lysine transport system substrate-binding protein
D HMPREF0868_1418 ABC transporter, ATP-binding protein K17074 lysX2; putative lysine transport system permease protein
D HMPREF0868_1143 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF0868_1142 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF0868_1141 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF0868_1140 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF0868_1139 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF0868_1457 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF0868_1458 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF0868_1459 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF0868_1083 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D HMPREF0868_1082 ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein
D HMPREF0868_1081 ABC transporter, permease protein K13891 gsiD; glutathione transport system permease protein
D HMPREF0868_1117 ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF0868_1359 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D HMPREF0868_1358 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HMPREF0868_0144 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0868_1509 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0868_1191 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0868_1407 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0868_0173 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D HMPREF0868_0172 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D HMPREF0868_0174 ABC transporter, ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D HMPREF0868_1555 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF0868_1556 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0868_1087 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D HMPREF0868_1088 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D HMPREF0868_0141 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0868_0154 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0868_1189 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0868_1410 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0868_0142 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0868_0155 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0868_1188 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0868_1409 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0868_0571 ABC transporter, ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HMPREF0868_0570 ABC transporter, ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HMPREF0868_0118 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:clo02060]
D HMPREF0868_1002 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:clo03070]
D HMPREF0868_0967 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HMPREF0868_0966 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HMPREF0868_1277 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0868_0051 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0868_1520 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0868_0865 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0868_1294 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0868_1091 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0868_0646 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0868_1176 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:clo02020]
D HMPREF0868_0075 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HMPREF0868_0076 response regulator receiver domain protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D HMPREF0868_0080 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0868_0761 trypsin K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF0868_1347 membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HMPREF0868_0844 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D HMPREF0868_0346 response regulator receiver domain protein K07775 resD; two-component system, OmpR family, response regulator ResD
D HMPREF0868_1282 response regulator receiver domain protein K07668 vicR; two-component system, OmpR family, response regulator VicR
D HMPREF0868_0093 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0868_1632 response regulator receiver domain protein K14981 chvI; two-component system, OmpR family, response regulator ChvI
D HMPREF0868_1346 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0868_0752 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HMPREF0868_0733 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF0868_0659 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF0868_0288 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF0868_0308 response regulator receiver domain protein K07720 yesN; two-component system, response regulator YesN
D HMPREF0868_0289 response regulator receiver domain protein K07720 yesN; two-component system, response regulator YesN
D HMPREF0868_1600 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:clo02024]
D HMPREF0868_0378 ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HMPREF0868_0376 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HMPREF0868_0379 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HMPREF0868_0377 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HMPREF0868_1143 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF0868_1142 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF0868_1141 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF0868_1140 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF0868_1139 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF0868_0391 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_1128 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0217 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0281 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0659 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF0868_0638 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_1469 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0409 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0222 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0993 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0566 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0243 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0410 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0639 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0992 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_1467 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0567 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0220 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0991 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_1466 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0411 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0640 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0221 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0568 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0641 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_1080 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0412 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0990 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0569 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0223 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0413 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0868_1079 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0642 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0989 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0868_1294 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0868_1277 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0868_0051 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0868_1520 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0868_0865 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0868_1091 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0868_0646 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0868_1176 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D HMPREF0868_0025 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D HMPREF0868_0868 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HMPREF0868_1604 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:clo01501]
D HMPREF0868_0983 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HMPREF0868_1383 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HMPREF0868_0031 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:clo01502]
D HMPREF0868_0353 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0868_1561 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0868_0338 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF0868_0339 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0868_0341 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF0868_1346 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:clo01503]
D HMPREF0868_1451 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HMPREF0868_0761 trypsin K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:clo01000]
C 01001 Protein kinases [BR:clo01001]
D HMPREF0868_1149 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF0868_0075 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HMPREF0868_0844 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D HMPREF0868_0288 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:clo01009]
D HMPREF0868_1133 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0868_0618 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG
D HMPREF0868_1150 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:clo01002]
D HMPREF0868_0961 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HMPREF0868_0823 peptidase C1-like family K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF0868_1340 peptidase C1-like family K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF0868_0102 putative pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D HMPREF0868_1066 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0868_1075 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0868_1456 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D HMPREF0868_0563 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF0868_0877 putative sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D HMPREF0868_0821 srtB; sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D HMPREF0868_1030 peptidase, C69 family K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF0868_1618 pepD; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF0868_0041 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0868_1627 peptidase family M1 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF0868_0095 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D HMPREF0868_0060 peptidase family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D HMPREF0868_1346 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0868_1041 putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF0868_1257 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HMPREF0868_0574 pepD; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HMPREF0868_1518 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HMPREF0868_0969 Creatinase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HMPREF0868_0901 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF0868_0938 putative RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HMPREF0868_0761 trypsin K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF0868_1390 hypothetical protein K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF0868_0979 PA domain protein K08652 C5AP; C5a peptidase [EC:3.4.21.110]
D HMPREF0868_0383 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF0868_1302 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF0868_1244 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HMPREF0868_0727 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0868_0819 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0868_0726 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0868_0978 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D HMPREF0868_1553 peptidase, S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HMPREF0868_1307 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HMPREF0868_0458 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:clo01003]
D HMPREF0868_0788 glgA; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D HMPREF0868_0031 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF0868_1601 glycosyltransferase, group 1 family protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:clo01005]
D HMPREF0868_0418 glycosyltransferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D HMPREF0868_1442 glycosyltransferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D HMPREF0868_0923 bacterial sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:clo01011]
D HMPREF0868_1280 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0868_1263 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0868_0900 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF0868_0484 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF0868_0353 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0868_0292 FemAB family protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D HMPREF0868_1561 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0868_0339 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0868_0341 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF0868_0401 putative undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0868_0631 putative integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HMPREF0868_0031 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF0868_0337 penicillin-binding protein, transpeptidase domain protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D HMPREF0868_0607 penicillin-binding protein, transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D HMPREF0868_0383 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF0868_1346 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0868_0563 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF0868_0877 putative sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D HMPREF0868_0821 srtB; sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D HMPREF0868_0457 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HMPREF0868_1451 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:clo01004]
D HMPREF0868_1228 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0868_0880 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0868_1162 GDSL-like protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D HMPREF0868_0391 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_1128 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0217 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0281 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0588 AMP-binding enzyme K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D HMPREF0868_1381 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0868_1043 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:clo01006]
D HMPREF0868_1233 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF0868_0941 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF0868_0885 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:clo01007]
D HMPREF0868_0766 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0868_0765 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HMPREF0868_1319 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0868_0625 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF0868_0743 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0868_0789 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0868_1505 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0868_1048 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0868_0649 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0868_1403 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0868_0952 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0868_0725 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0868_0891 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF0868_0724 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0868_1482 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF0868_1259 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0868_0447 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0868_0536 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0868_1344 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0868_0435 threonine/alanine tRNA ligase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0868_1096 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0868_1095 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0868_0443 aminotransferase, class I/II K00841 patA; aminotransferase [EC:2.6.1.-]
D HMPREF0868_0795 aminotransferase, class I/II K10907 K10907; aminotransferase [EC:2.6.1.-]
D HMPREF0868_1615 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D HMPREF0868_0274 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0868_0214 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0868_0575 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:clo00194]
D HMPREF0868_1118 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF0868_1119 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF0868_1120 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF0868_1121 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF0868_1122 ATP synthase B/B' CF(0) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF0868_1123 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF0868_1124 putative ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:clo03000]
D HMPREF0868_1584 LysR substrate binding domain protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D HMPREF0868_1072 LysR substrate binding domain protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D HMPREF0868_0018 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF0868_0808 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF0868_1167 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D HMPREF0868_0742 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D HMPREF0868_1089 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D HMPREF0868_0533 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D HMPREF0868_0478 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D HMPREF0868_0659 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF0868_0999 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HMPREF0868_0433 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D HMPREF0868_0987 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D HMPREF0868_0674 iron dependent repressor DNA binding domain protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D HMPREF0868_0280 sugar-specific transcriptional regulator, TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D HMPREF0868_1557 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D HMPREF0868_0488 hypothetical protein K07727 K07727; putative transcriptional regulator
D HMPREF0868_0158 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF0868_0259 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF0868_0139 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF0868_0534 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HMPREF0868_0088 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF0868_0777 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HMPREF0868_0469 transcriptional repressor of CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D HMPREF0868_0345 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:clo03021]
D HMPREF0868_0955 DEAD2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D HMPREF0868_1512 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0868_0195 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0868_0196 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0868_1483 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF0868_0868 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HMPREF0868_0247 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF0868_1236 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF0868_1276 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF0868_0953 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D HMPREF0868_1400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:clo03019]
D HMPREF0868_0644 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0868_1328 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF0868_0963 YmdA/YtgF family protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HMPREF0868_0049 putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF0868_1604 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0868_0875 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF0868_1400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HMPREF0868_1133 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0868_0779 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0868_0834 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0868_1262 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:clo03011]
D HMPREF0868_1042 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF0868_0945 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF0868_1534 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF0868_0873 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF0868_1523 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF0868_1386 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF0868_1247 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF0868_1526 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF0868_1006 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF0868_1541 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF0868_1513 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF0868_1248 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF0868_1514 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF0868_1527 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF0868_0874 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF0868_1175 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF0868_1531 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF0868_1384 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF0868_1536 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF0868_1321 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF0868_1339 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HMPREF0868_1274 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF0868_1537 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF0868_1540 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF0868_1539 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF0868_1528 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF0868_1525 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF0868_0905 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF0868_1273 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF0868_1275 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF0868_1272 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF0868_1007 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF0868_1530 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF0868_1521 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF0868_1533 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF0868_1511 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF0868_1524 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF0868_1171 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF0868_1313 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF0868_0688 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF0868_1535 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF0868_1538 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF0868_1529 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF0868_0690 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF0868_1532 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF0868_1522 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF0868_1399 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF0868_0453 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF0868_1297 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF0868_1314 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF0868_1515 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF0868_1283 rrf_2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0868_1473 rrf_1; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0868_1286 rrs_2; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0868_1476 rrs_1; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0868_1284 rrl_2; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0868_1474 rrl_1; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:clo03009]
D HMPREF0868_0644 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0868_0957 era; ribosome biogenesis GTPase Era K03595 era; GTPase
D HMPREF0868_0691 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D HMPREF0868_0247 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF0868_1236 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF0868_1276 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF0868_0829 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HMPREF0868_0931 putative ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HMPREF0868_0729 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HMPREF0868_0350 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HMPREF0868_0723 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HMPREF0868_1290 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF0868_0335 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HMPREF0868_1009 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HMPREF0868_0745 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HMPREF0868_1278 putative rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HMPREF0868_0851 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HMPREF0868_1151 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HMPREF0868_0113 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HMPREF0868_1160 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HMPREF0868_0960 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF0868_0852 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF0868_1227 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF0868_0843 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D HMPREF0868_1003 acetyltransferase, GNAT family K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HMPREF0868_0427 toxin-antitoxin system, toxin component, GNAT domain protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HMPREF0868_1173 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D HMPREF0868_0634 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D HMPREF0868_0781 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HMPREF0868_0045 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HMPREF0868_0744 RNase3 domain protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D HMPREF0868_1148 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HMPREF0868_0455 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D HMPREF0868_1170 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D HMPREF0868_0103 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D HMPREF0868_1395 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF0868_1337 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF0868_0250 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D HMPREF0868_0246 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D HMPREF0868_0800 iojap-like protein K09710 ybeB; ribosome-associated protein
D HMPREF0868_0692 putative RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein
D HMPREF0868_0487 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D HMPREF0868_0856 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D HMPREF0868_0452 putative ACR, COG1399 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:clo03016]
D HMPREF0868_0054 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HMPREF0868_0766 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0868_0447 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0868_1048 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0868_1403 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0868_1505 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0868_0765 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HMPREF0868_0789 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0868_0952 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0868_0725 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0868_1344 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0868_0435 threonine/alanine tRNA ligase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0868_0891 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF0868_1482 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF0868_0536 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0868_1259 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0868_0743 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0868_0649 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0868_0724 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0868_1096 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0868_1095 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0868_1319 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0868_0625 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF0868_0406 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HMPREF0868_1341 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF0868_1387 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HMPREF0868_1508 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HMPREF0868_0252 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HMPREF0868_1163 putative cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_1166 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_1395 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF0868_0885 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF0868_1292 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HMPREF0868_1291 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HMPREF0868_1296 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HMPREF0868_0871 rnpB; bacterial RNase P class A K01978 rnpB; M1 RNA
D HMPREF0868_1644 YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HMPREF0868_0698 cytidine and deoxycytidylate deaminase zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HMPREF0868_0415 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HMPREF0868_0882 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HMPREF0868_0047 yqeV; tRNA methylthiotransferase YqeV K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D HMPREF0868_0861 trmFO; tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HMPREF0868_1172 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HMPREF0868_0869 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D HMPREF0868_1130 putative RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HMPREF0868_1312 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D HMPREF0868_0881 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HMPREF0868_0862 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HMPREF0868_0915 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D HMPREF0868_0863 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HMPREF0868_1165 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HMPREF0868_0903 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HMPREF0868_1004 yeaZ; universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HMPREF0868_1005 hydrolase, P-loop family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HMPREF0868_0500 ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D HMPREF0868_0049 putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF0868_0875 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:clo03012]
D HMPREF0868_0249 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF0868_1315 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF0868_0825 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HMPREF0868_0944 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF0868_1245 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0868_0416 translation elongation factor G K02355 fusA; elongation factor G
D HMPREF0868_1246 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF0868_1396 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HMPREF0868_0942 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HMPREF0868_1397 methyltransferase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HMPREF0868_0407 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HMPREF0868_1516 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HMPREF0868_1240 efp; translation elongation factor P K02356 efp; elongation factor P
D HMPREF0868_0796 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HMPREF0868_1357 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:clo03110]
D HMPREF0868_0472 ATPase family associated with various cellular activities (AAA) K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HMPREF0868_1309 ATPase family associated with various cellular activities (AAA) K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HMPREF0868_1301 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HMPREF0868_0618 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG
D HMPREF0868_0779 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0868_0834 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0868_0780 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF0868_1551 hslO; chaperonin HslO K04083 hslO; molecular chaperone Hsp33
D HMPREF0868_0778 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF0868_0833 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF0868_0761 trypsin K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF0868_0901 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF0868_1124 putative ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF0868_1390 hypothetical protein K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF0868_0979 PA domain protein K08652 C5AP; C5a peptidase [EC:3.4.21.110]
D HMPREF0868_1506 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HMPREF0868_0824 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HMPREF0868_1349 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:clo04131]
D HMPREF0868_0441 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0868_1493 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0868_0988 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0868_0757 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0868_0618 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG
D HMPREF0868_0056 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:clo04121]
C 03051 Proteasome [BR:clo03051]
D HMPREF0868_0618 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:clo03032]
D HMPREF0868_0626 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HMPREF0868_0700 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HMPREF0868_0093 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0868_0904 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF0868_0616 DNA replication protein DnaC domain protein K02315 dnaC; DNA replication protein DnaC
D HMPREF0868_0867 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF0868_1385 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0868_0621 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0868_0936 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0868_0092 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0868_0895 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0868_1013 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0868_1019 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0868_1169 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF0868_0666 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF0868_1289 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0868_0973 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0868_0974 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0868_0089 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0868_0860 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:clo03036]
D HMPREF0868_0644 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0868_0441 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0868_0700 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HMPREF0868_0093 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0868_1614 ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D HMPREF0868_0645 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D HMPREF0868_1046 ScpA/B protein K05896 scpA; segregation and condensation protein A
D HMPREF0868_1045 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D HMPREF0868_1022 septum formation initiator K05589 ftsB; cell division protein FtsB
D HMPREF0868_1556 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0868_0628 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF0868_0340 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D HMPREF0868_0606 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D HMPREF0868_1555 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF0868_0344 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0868_1451 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HMPREF0868_0684 hypothetical protein K09772 sepF; cell division inhibitor SepF
D HMPREF0868_1401 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D HMPREF0868_0087 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF0868_0088 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF0868_1291 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HMPREF0868_1290 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF0868_0861 trmFO; tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HMPREF0868_0887 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D HMPREF0868_0492 phage integrase SAM-like domain protein K04763 xerD; integrase/recombinase XerD
D HMPREF0868_0897 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D HMPREF0868_1261 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:clo03400]
D HMPREF0868_0912 6-O-methylguanine DNA methyltransferase, DNA binding domain protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HMPREF0868_1465 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF0868_0348 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF0868_0955 DEAD2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D HMPREF0868_0753 mutX; mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0868_1306 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF0868_0704 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF0868_0722 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF0868_1338 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF0868_0666 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF0868_1310 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF0868_0619 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF0868_1001 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF0868_0495 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0868_0195 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0868_0196 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0868_1512 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0868_1483 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF0868_0408 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0868_0883 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HMPREF0868_1131 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D HMPREF0868_0884 mutL; DNA mismatch repair domain protein K03572 mutL; DNA mismatch repair protein MutL
D HMPREF0868_1235 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF0868_1234 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF0868_0621 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0868_0936 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0868_0092 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0868_0895 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0868_1013 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0868_1019 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0868_1385 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0868_0632 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF0868_0917 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF0868_0916 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF0868_0918 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HMPREF0868_0935 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0868_1491 Ser/Thr phosphatase family protein K03547 sbcD; DNA repair protein SbcD/Mre11
D HMPREF0868_0721 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HMPREF0868_0091 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF0868_0349 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF0868_0115 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF0868_0956 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF0868_1021 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF0868_1230 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HMPREF0868_1379 putative ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D HMPREF0868_1380 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D HMPREF0868_1289 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0868_0973 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0868_0974 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0868_0089 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0868_0860 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HMPREF0868_0700 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HMPREF0868_1487 putative DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HMPREF0868_0633 recX; regulatory protein RecX K03565 recX; regulatory protein
D HMPREF0868_0098 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0868_0099 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:clo03029]
D HMPREF0868_0249 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF0868_1315 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF0868_0944 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF0868_1245 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0868_0416 translation elongation factor G K02355 fusA; elongation factor G
D HMPREF0868_1246 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF0868_0957 era; ribosome biogenesis GTPase Era K03595 era; GTPase
D HMPREF0868_1319 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0868_1403 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0868_0725 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0868_1482 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF0868_0789 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0868_1385 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0868_0779 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0868_0778 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF0868_0834 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0868_0833 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF0868_0780 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF0868_1163 putative cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_1166 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_1294 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0868_0618 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:clo02000]
D HMPREF0868_0141 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0868_0154 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0868_1189 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0868_1410 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0868_0142 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0868_0155 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0868_1188 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0868_1409 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0868_0764 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF0868_0763 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF0868_0071 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF0868_0192 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF0868_0571 ABC transporter, ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HMPREF0868_0570 ABC transporter, ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HMPREF0868_1054 ABC transporter, ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D HMPREF0868_0118 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D HMPREF0868_1586 putative taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D HMPREF0868_1587 ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D HMPREF0868_1585 ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D HMPREF0868_0287 ABC transporter, solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF0868_0299 ABC transporter, solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF0868_0284 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF0868_0285 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D HMPREF0868_0301 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D HMPREF0868_0300 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HMPREF0868_0286 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HMPREF0868_0378 ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HMPREF0868_0376 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HMPREF0868_0379 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HMPREF0868_0377 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HMPREF0868_0503 Phycoerythrin, alpha/beta chain K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF0868_0181 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF0868_0182 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0868_0183 ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0868_0025 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF0868_0027 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF0868_0026 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF0868_0657 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF0868_0264 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF0868_0653 branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF0868_0266 branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF0868_0267 branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HMPREF0868_0654 branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HMPREF0868_0652 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF0868_0265 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF0868_0809 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF0868_0508 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF0868_0810 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF0868_0507 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF0868_0314 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF0868_0811 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF0868_0506 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF0868_0319 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF0868_0315 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF0868_0080 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0868_0079 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF0868_0078 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF0868_0077 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF0868_1036 ABC transporter, substrate-binding protein, family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D HMPREF0868_1037 ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D HMPREF0868_1038 ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0868_1143 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF0868_1142 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF0868_1141 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF0868_1140 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF0868_1139 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF0868_1457 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF0868_1458 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF0868_1459 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF0868_1419 ABC transporter, substrate-binding protein, family 3 K17073 lysX1; putative lysine transport system substrate-binding protein
D HMPREF0868_1418 ABC transporter, ATP-binding protein K17074 lysX2; putative lysine transport system permease protein
D HMPREF0868_1083 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D HMPREF0868_1082 ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein
D HMPREF0868_1081 ABC transporter, permease protein K13891 gsiD; glutathione transport system permease protein
D HMPREF0868_0638 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_1469 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0409 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0222 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0993 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0566 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0243 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0868_0410 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0639 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0992 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_1467 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0567 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0220 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0868_0991 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_1466 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0411 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0640 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0221 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0568 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0868_0641 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_1080 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0412 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0990 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0569 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0223 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0413 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0868_1079 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0642 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0989 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0868_0211 periplasmic binding protein K25113 htsA; heme transport system substrate-binding protein
D HMPREF0868_0210 iron chelate uptake ABC transporter, FeCT family, permease protein K25114 htsB; heme transport system permease protein
D HMPREF0868_0209 ABC transporter, ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D HMPREF0868_1117 ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF0868_1359 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D HMPREF0868_1358 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HMPREF0868_1408 conserved hypothetical protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D HMPREF0868_1192 conserved hypothetical protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D HMPREF0868_0381 conserved hypothetical protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D HMPREF0868_0145 conserved hypothetical protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D HMPREF0868_0144 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0868_1509 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0868_1191 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0868_1407 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0868_1510 cobalt ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0868_0143 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0868_1406 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0868_1190 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0868_0331 cobalt transport protein K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D HMPREF0868_0330 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D HMPREF0868_0174 ABC transporter, ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D HMPREF0868_0173 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D HMPREF0868_0172 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D HMPREF0868_1087 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D HMPREF0868_1088 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D HMPREF0868_1555 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF0868_1556 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0868_1391 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0868_1629 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0868_1437 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0868_1438 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0868_0439 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0868_0302 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0868_1392 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0868_1630 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0868_0236 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0868_0237 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0868_0241 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0868_1181 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0868_0561 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0868_0669 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0868_0562 putative bacteriocin export ABC transporter, lactococcin 972 group K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0868_1182 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0868_0238 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0868_0242 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0868_0371 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HMPREF0868_1067 transporter, CPA2 family K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D HMPREF0868_0387 citrate transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D HMPREF0868_0481 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D HMPREF0868_0225 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D HMPREF0868_0226 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF0868_1258 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF0868_1461 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF0868_0719 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF0868_1187 iron dependent repressor DNA binding domain protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF0868_0056 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family
D HMPREF0868_1002 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF0868_1180 MIP family channel protein K02440 glpF; glycerol uptake facilitator
D HMPREF0868_0697 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D HMPREF0868_0602 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D HMPREF0868_0663 CorA-like protein K03284 corA; magnesium transporter
D HMPREF0868_0178 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF0868_0949 LPXTG-motif cell wall anchor domain protein K21449 ata; trimeric autotransporter adhesin
D HMPREF0868_0540 transporter, major facilitator family protein K16211 malY; maltose/moltooligosaccharide transporter
D HMPREF0868_0668 transporter, gluconate:H+ symporter family K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HMPREF0868_0275 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D HMPREF0868_0947 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D HMPREF0868_1049 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D HMPREF0868_0601 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D HMPREF0868_0109 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D HMPREF0868_0603 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF0868_0108 TrkA N-terminal domain protein K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF0868_0580 putative permease K02824 uraA; uracil permease
D HMPREF0868_0112 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HMPREF0868_0997 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF0868_0754 chromate transport protein K07240 chrA; chromate transporter
D HMPREF0868_0755 chromate transport protein K07240 chrA; chromate transporter
D HMPREF0868_0631 putative integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HMPREF0868_1347 membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HMPREF0868_0928 hypothetical protein K23675 fmnP; riboflavin transporter
D HMPREF0868_1152 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D HMPREF0868_0340 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D HMPREF0868_0606 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D HMPREF0868_0233 FTR1 family protein K07243 FTR; high-affinity iron transporter
D HMPREF0868_0234 hypothetical protein K07230 p19; periplasmic iron binding protein
D HMPREF0868_1351 cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D HMPREF0868_0375 Mg2+ transporter-C family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D HMPREF0868_0374 Mg2+ transporter-C family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:clo02044]
D HMPREF0868_0733 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF0868_0801 comEA protein K02237 comEA; competence protein ComEA
D HMPREF0868_0032 cytidine and deoxycytidylate deaminase zinc-binding region K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HMPREF0868_0896 DNA internalization competence protein ComEC/Rec2-like protein K02238 comEC; competence protein ComEC
D HMPREF0868_1091 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0868_0967 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HMPREF0868_1277 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0868_0966 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HMPREF0868_0051 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0868_1520 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0868_1176 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0868_0646 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0868_0865 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0868_1294 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:clo02042]
D HMPREF0868_0178 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:clo02022]
D HMPREF0868_0075 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HMPREF0868_0076 response regulator receiver domain protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D HMPREF0868_0844 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D HMPREF0868_0346 response regulator receiver domain protein K07775 resD; two-component system, OmpR family, response regulator ResD
D HMPREF0868_1282 response regulator receiver domain protein K07668 vicR; two-component system, OmpR family, response regulator VicR
D HMPREF0868_1632 response regulator receiver domain protein K14981 chvI; two-component system, OmpR family, response regulator ChvI
D HMPREF0868_0065 response regulator receiver domain protein K02483 K02483; two-component system, OmpR family, response regulator
D HMPREF0868_0288 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF0868_0308 response regulator receiver domain protein K07720 yesN; two-component system, response regulator YesN
D HMPREF0868_0289 response regulator receiver domain protein K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:clo02035]
D HMPREF0868_0733 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins [BR:clo03037]
D HMPREF0868_1067 transporter, CPA2 family K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:clo04812]
D HMPREF0868_1401 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D HMPREF0868_0344 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0868_0087 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF0868_0088 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:clo04147]
D HMPREF0868_0618 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG
D HMPREF0868_0441 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0868_1604 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0868_1493 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0868_0015 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0868_0610 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0868_0757 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0868_0834 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0868_0779 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0868_0827 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0868_0954 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF0868_1245 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0868_1341 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF0868_0218 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0868_0391 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_1128 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0217 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_0281 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0868_1519 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF0868_0622 phosphoribosyl transferase domain protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF0868_1078 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF0868_0785 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF0868_0596 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HMPREF0868_0988 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:clo02048]
D HMPREF0868_0494 hsdR; type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HMPREF0868_1374 hsdR; type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HMPREF0868_0493 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HMPREF0868_1372 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HMPREF0868_0489 putative type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HMPREF0868_1370 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HMPREF0868_1223 type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D HMPREF0868_1222 DNA (cytosine-5-)-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HMPREF0868_1572 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D HMPREF0868_1611 addiction module toxin component, YafQ family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D HMPREF0868_0245 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF0868_1610 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF0868_1571 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF0868_1592 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF0868_0396 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF0868_0138 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF0868_0119 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF0868_1593 toxin-antitoxin system, toxin component, RelE family K19092 parE1_3_4; toxin ParE1/3/4
D HMPREF0868_0344 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0868_1401 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D HMPREF0868_0766 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0868_1163 putative cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0868_1166 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:clo04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:clo01504]
D HMPREF0868_0373 acetyltransferase, GNAT family K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D HMPREF0868_1202 putative translation elongation factor G K18220 tetM; ribosomal protection tetracycline resistance protein
D HMPREF0868_0118 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D HMPREF0868_0983 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HMPREF0868_1383 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HMPREF0868_1346 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:clo03100]
D HMPREF0868_1115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0868_1564 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0868_1285 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0868_0513 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0868_0977 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0868_0748 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0868_0432 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0868_1472 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF0868_1500 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF0868_1266 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF0868_0908 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0868_0440 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0868_1311 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0868_1268 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0868_0701 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0868_1267 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0868_0976 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0868_0909 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF0868_1475 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF0868_1090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_0464 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_1053 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_0922 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_1034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0868_0907 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0868_0804 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0868_1269 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0868_1155 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0868_1033 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0868_1499 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF0868_1031 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0868_0876 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0868_1099 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0868_1621 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0868_0556 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0868_1620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0868_1369 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0868_1368 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0868_1404 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0868_0680 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0868_0623 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF0868_1156 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF0868_1501 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0868_0062 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0868_0995 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0868_1286 rrs_2; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0868_1476 rrs_1; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0868_1284 rrl_2; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0868_1474 rrl_1; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0868_1283 rrf_2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0868_1473 rrf_1; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0868_1018 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF0868_0871 rnpB; bacterial RNase P class A K01978 rnpB; M1 RNA
D HMPREF0868_0848 ssrA; ssrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HMPREF0868_0589 acyl-CoA dehydrogenase, C-terminal domain protein K22430 carC; caffeyl-CoA reductase-Etf complex subunit CarC [EC:1.3.1.108]
D HMPREF0868_0590 electron transfer flavoprotein domain protein K22431 carD; caffeyl-CoA reductase-Etf complex subunit CarD [EC:1.3.1.108]
D HMPREF0868_0437 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D HMPREF0868_1325 ferredoxin--NADP+ reductase, subunit alpha K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HMPREF0868_1029 ArsC family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HMPREF0868_0532 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HMPREF0868_0893 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HMPREF0868_1107 radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HMPREF0868_0707 hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D HMPREF0868_0797 hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D HMPREF0868_0255 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HMPREF0868_0932 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HMPREF0868_1453 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D HMPREF0868_1264 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D HMPREF0868_0471 ATP:guanido phosphotransferase, C-terminal catalytic domain protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D HMPREF0868_0417 PHP domain N-terminal region family protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HMPREF0868_0970 yqeG; HAD phosphatase, family IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D HMPREF0868_0958 7TM-HD extracellular K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D HMPREF0868_1504 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HMPREF0868_0662 putative thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D HMPREF0868_0812 glycosyl hydrolase, family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D HMPREF0868_0934 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF0868_1635 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D HMPREF0868_1394 low molecular weight phosphotyrosine protein phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D HMPREF0868_0262 hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D HMPREF0868_1562 YjeF-like protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HMPREF0868_0586 fldB; R-phenyllactate dehydratase, medium subunit K20903 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha [EC:4.2.1.167]
D HMPREF0868_0587 2-hydroxyglutaryl-CoA dehydratase, D-component K20904 hgdB; (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta [EC:4.2.1.167]
D HMPREF0868_0965 TIGR00268 family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D HMPREF0868_0798 TIGR00299 family protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D HMPREF0868_0585 hgdC; (R)-2-hydroxyglutaryl-CoA dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D HMPREF0868_1548 rnfD; electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D HMPREF0868_1549 rnfC; electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D HMPREF0868_1544 rnfB; electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D HMPREF0868_0104 copper-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D HMPREF0868_0451 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HMPREF0868_0434 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D HMPREF0868_0325 mgtA; magnesium-importing ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D HMPREF0868_0033 E1-E2 ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D HMPREF0868_1547 rnfG; electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D HMPREF0868_1546 rnfE; electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D HMPREF0868_1545 rnfA; electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D HMPREF0868_0368 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D HMPREF0868_0207 oxidoreductase, nitrogenase component 1 K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D HMPREF0868_0208 oxidoreductase, nitrogenase component 1 K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D HMPREF0868_0636 hypothetical protein K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D HMPREF0868_0980 putative flavodoxin K03839 fldA; flavodoxin I
D HMPREF0868_0783 flavodoxin K03839 fldA; flavodoxin I
D HMPREF0868_0066 4Fe-4S binding domain protein K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D HMPREF0868_1603 glyoxalase family protein K08234 yaeR; glyoxylase I family protein
D HMPREF0868_0683 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HMPREF0868_0925 hypothetical protein K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HMPREF0868_1039 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D HMPREF0868_1485 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D HMPREF0868_0090 hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
C 99975 Protein processing
D HMPREF0868_0470 hypothetical protein K19411 mcsA; protein arginine kinase activator
D HMPREF0868_1303 tig; trigger factor K03545 tig; trigger factor
D HMPREF0868_1304 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HMPREF0868_0858 magnesium chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D HMPREF0868_0864 hypothetical protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D HMPREF0868_0889 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HMPREF0868_1168 hypothetical protein K07460 yraN; putative endonuclease
D HMPREF0868_0859 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D HMPREF0868_1212 DNA-binding helix-turn-helix protein K07467 nicK; putative DNA relaxase
D HMPREF0868_1164 recombination factor protein RarA K07478 ycaJ; putative ATPase
D HMPREF0868_0672 transposase K07483 K07483; transposase
D HMPREF0868_0035 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D HMPREF0868_0445 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D HMPREF0868_0036 transposase, IS605 OrfB family K07496 K07496; putative transposase
D HMPREF0868_0295 transposase, IS605 OrfB family K07496 K07496; putative transposase
D HMPREF0868_1342 transposase, IS605 OrfB family K07496 K07496; putative transposase
D HMPREF0868_0446 transposase, IS605 OrfB family K07496 K07496; putative transposase
D HMPREF0868_1575 integrase core domain protein K07497 K07497; putative transposase
D HMPREF0868_0673 integrase core domain protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D HMPREF0868_1020 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HMPREF0868_0830 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HMPREF0868_1050 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HMPREF0868_0872 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HMPREF0868_1597 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HMPREF0868_0362 agcS; amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HMPREF0868_1460 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D HMPREF0868_1293 R3H domain protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D HMPREF0868_0456 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D HMPREF0868_0959 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
C 99994 Others
D HMPREF0868_1077 CutC family protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HMPREF0868_0367 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HMPREF0868_0370 SufB/sufD domain protein K09015 sufD; Fe-S cluster assembly protein SufD
D HMPREF0868_1100 hypothetical protein K01421 yhgE; putative membrane protein
C 99997 Function unknown
D HMPREF0868_0190 radical SAM domain protein K06871 K06871; uncharacterized protein
D HMPREF0868_0866 six-Cys-in-45 modification radical SAM protein K06871 K06871; uncharacterized protein
D HMPREF0868_1609 hypothetical protein K06890 K06890; uncharacterized protein
D HMPREF0868_1174 KH domain protein K06960 K06960; uncharacterized protein
D HMPREF0868_1102 hypothetical protein K07003 K07003; uncharacterized protein
D HMPREF0868_1052 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D HMPREF0868_1606 putative permease K07089 K07089; uncharacterized protein
D HMPREF0868_0117 hypothetical protein K07090 K07090; uncharacterized protein
D HMPREF0868_0664 Ser/Thr phosphatase family protein K07098 K07098; uncharacterized protein
D HMPREF0868_1000 Ser/Thr phosphatase family protein K07099 K07099; uncharacterized protein
D HMPREF0868_1588 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D HMPREF0868_1590 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D HMPREF0868_0519 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF0868_0171 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF0868_0150 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF0868_0148 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF0868_1415 pyridine nucleotide-disulfide oxidoreductase K07137 K07137; uncharacterized protein
D HMPREF0868_0839 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D HMPREF0868_1295 conserved hypothetical protein YidD K08998 K08998; uncharacterized protein
D HMPREF0868_0333 PAS domain S-box protein K09155 K09155; uncharacterized protein
D HMPREF0868_0807 hypothetical protein K09704 K09704; uncharacterized protein
D HMPREF0868_1177 sigma-70, region 4 K09787 K09787; uncharacterized protein
D HMPREF0868_1070 hypothetical protein K09790 K09790; uncharacterized protein
D HMPREF0868_0042 hypothetical protein K01163 K01163; uncharacterized protein
D HMPREF0868_0689 hypothetical protein K07584 ysxB; uncharacterized protein
D HMPREF0868_0831 conserved hypothetical protein TIGR00153 K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 18, 2024