+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Condylostylus longicornis</h2>
%<!-- w=600, -->
!
A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        129613199 mRNA cap guanine-N7 methyltransferase	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        129615641 mRNA-capping enzyme isoform X1	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        129617281 cyclin-dependent kinase 2 homolog	K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22] 
E        129605749 cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        129605320 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        129615715 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        129612960 RNA guanine-N7 methyltransferase activating subunit	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        129617468 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        129608660 nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
E        129617619 nuclear cap-binding protein subunit 2B-like	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        129614780 cleavage and polyadenylation specificity factor subunit 5	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        129608726 cleavage and polyadenylation specificity factor subunit 6 isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        129612869 protein CLP1 homolog	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        129606269 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        129608437 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        129607054 cleavage and polyadenylation specificity factor 73	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        129609971 cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        129614296 pre-mRNA 3'-end-processing factor FIP1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        129608285 pre-mRNA 3' end processing protein WDR33	K15542 PFS2; polyadenylation factor subunit 2 
E        129608705 WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        129608082 serine/threonine-protein phosphatase alpha-1 isoform isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        129611286 serine/threonine-protein phosphatase alpha-2 isoform-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        129615467 serine/threonine-protein phosphatase beta isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        129607799 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        129608156 cleavage stimulation factor subunit 1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        129607128 cleavage stimulation factor subunit 2 tau variant	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        129616462 protein suppressor of forked isoform X1	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        129607641 symplekin	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        129618564 small nuclear ribonucleoprotein-associated protein B	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        129616956 small nuclear ribonucleoprotein Sm D3	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        129605948 probable small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        129612617 probable small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        129608395 small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        129607746 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        129608437 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        129607054 cleavage and polyadenylation specificity factor 73	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        129607128 cleavage stimulation factor subunit 2 tau variant	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        129607641 symplekin	K06100 SYMPK; symplekin 
E        129612034 histone RNA hairpin-binding protein	K18710 SLBP; histone RNA hairpin-binding protein 
D      DRB sensitivity inducing factor (DSIF) complex
E        129618378 uncharacterized protein LOC129618378	K15171 SUPT4H1; transcription elongation factor SPT4 
E        129607542 transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        129612584 transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        129607196 N6-adenosine-methyltransferase MT-A70-like protein	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        129617606 LOW QUALITY PROTEIN: N6-adenosine-methyltransferase subunit METTL3-like	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        129615924 N6-adenosine-methyltransferase non-catalytic subunit	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        129613539 N(6)-adenine-specific methyltransferase METTL4	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        129608647 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        129613329 pre-mRNA-splicing regulator female-lethal(2)D-like isoform X1	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        129605437 protein virilizer	K22910 VIRMA; protein virilizer 
E        129607241 RNA-binding protein spenito	K13190 RBM15; RNA-binding protein 15 
E        129615302 E3 ubiquitin-protein ligase Hakai	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        129606629 poly(A) polymerase type 3	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        129611000 poly(A) RNA polymerase GLD2-like	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        129612950 zinc finger protein swm	K13192 RBM26; RNA-binding protein 26 
E        129614738 TAR DNA-binding protein 43	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      129605932 DNA/RNA-binding protein KIN17	K13102 KIN; DNA/RNA-binding protein KIN17 
D      129617564 uncharacterized protein LOC129617564	K13102 KIN; DNA/RNA-binding protein KIN17 
D      129611150 methyltransferase-like protein 22	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      129614955 methyltransferase-like protein 22	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      129607270 terminal nucleotidyltransferase 5C	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      129607903 zinc finger CCCH domain-containing protein 14	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
D      129608923 serrate RNA effector molecule homolog isoform X1	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        129614376 RNA-binding protein 8A	K12876 RBM8A; RNA-binding protein 8A 
E        129609740 protein mago nashi	K12877 MAGOH; protein mago nashi 
E        129612333 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        129608708 ATP-dependent RNA helicase WM6	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        129607843 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        129613017 coiled-coil domain-containing protein 174	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        129607528 histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        129611160 pinin	K13114 PNN; pinin 
E        129614846 apoptotic chromatin condensation inducer in the nucleus isoform X1	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        129616161 RNA-binding protein with serine-rich domain 1-B	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
D      TREX complex
E        129614519 THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        129615330 THO complex subunit 2	K12879 THOC2; THO complex subunit 2 
E        129605387 THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        129612333 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        129614122 THO complex subunit 5 homolog	K13174 THOC5; THO complex subunit 5 
E        129608315 THO complex subunit 6	K13175 THOC6; THO complex subunit 6 
E        129616219 THO complex protein 7	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        129605418 PCI domain-containing protein 2 homolog	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        129611629 enhancer of yellow 2 transcription factor-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
D      Nuclear pore complex
E        129619204 nucleoprotein TPR	K09291 TPR; nucleoprotein TPR 
E        129606288 protein Rae1	K14298 RAE1; mRNA export factor 
E        129609694 protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        129619212 nucleoporin Nup37	K14302 NUP37; nuclear pore complex protein Nup37 
E        129609640 nuclear pore complex protein Nup75	K14304 NUP85; nuclear pore complex protein Nup85 
E        129607303 nucleoporin Nup43 isoform X1	K14305 NUP43; nuclear pore complex protein Nup43 
E        129605230 nuclear pore complex protein Nup50-like	K14295 NUP50; nuclear pore complex protein Nup50 
E        129605231 nuclear pore complex protein Nup50	K14295 NUP50; nuclear pore complex protein Nup50 
E        129616059 probable nucleoporin Nup54	K14308 NUP54; nuclear pore complex protein Nup54 
E        129611676 nuclear pore glycoprotein p62	K14306 NUP62; nuclear pore complex protein Nup62 
E        129606057 nuclear pore complex protein Nup88	K14318 NUP88; nuclear pore complex protein Nup88 
E        129618891 nuclear pore complex protein Nup93-1	K14309 NUP93; nuclear pore complex protein Nup93 
E        129616056 nuclear pore complex protein Nup98-Nup96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        129617695 uncharacterized protein LOC129617695	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        129607018 nuclear pore complex protein Nup107	K14301 NUP107; nuclear pore complex protein Nup107 
E        129618474 nuclear pore complex protein Nup133	K14300 NUP133; nuclear pore complex protein Nup133 
E        129614614 nucleoporin Nup188	K14311 NUP188; nuclear pore complex protein Nup188 
E        129615027 nuclear pore complex protein Nup154	K14312 NUP155; nuclear pore complex protein Nup155 
E        129613118 nuclear pore complex protein Nup160 homolog	K14303 NUP160; nuclear pore complex protein Nup160 
E        129619088 nucleoporin Nup35	K14313 NUP35; nuclear pore complex protein Nup53 
E        129619041 nuclear pore complex protein Nup205	K14310 NUP205; nuclear pore complex protein Nup205 
E        129610800 nuclear pore membrane glycoprotein 210	K14314 NUP210; nuclear pore complex protein Nup210 
E        129613680 nuclear pore complex protein Nup58 isoform X1	K14307 NUPL1; nucleoporin p58/p45 
E        129609544 nucleoporin Ndc1	K14315 NDC1; nucleoporin NDC1 
E        129607459 nucleoporin seh1-like	K14299 SEH1; nucleoporin SEH1 
E        129612240 nucleoporin seh1	K14299 SEH1; nucleoporin SEH1 
E        129618685 aladin	K14320 AAAS; aladin 
E        129619371 nuclear RNA export factor 1	K14284 NXF; nuclear RNA export factor 
E        129613367 NTF2-related export protein	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        129618337 GTP-binding nuclear protein Ran-like	K07936 RAN; GTP-binding nuclear protein Ran 
E        129607341 GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        129613982 acidic leucine-rich nuclear phosphoprotein 32 family member A	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        129615043 ELAV-like protein 1-A	K13088 ELAVL1; ELAV-like protein 1 
E        129615050 ELAV-like protein 1-A	K13088 ELAVL1; ELAV-like protein 1 
E        129615332 uncharacterized protein LOC129615332	K13088 ELAVL1; ELAV-like protein 1 
E        129615377 ELAV-like protein 2	K13088 ELAVL1; ELAV-like protein 1 
E        129607764 protein elav	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        129613129 ELAV-like protein 2 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        129614928 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        129615023 ELAV-like protein 1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        129615067 ELAV-like protein 1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        129615201 ELAV-like protein 2	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        129617703 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        129615324 FAS-associated factor 2	K18726 FAF2; FAS-associated factor 2 
E        129610737 transitional endoplasmic reticulum ATPase TER94	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        129608909 exportin-1	K14290 XPO1; exportin-1 
E        129618643 ran-binding protein 16 isoform X1	K18460 XPO7; exportin-7 
E        129617816 exportin-7-like	K18460 XPO7; exportin-7 
E        129609421 ran GTPase-activating protein	K14319 RANGAP1; Ran GTPase-activating protein 1 
D      eIF4F and regulatory proteins
E        129618215 uncharacterized protein LOC129618215	K03259 EIF4E; translation initiation factor 4E 
E        129610052 uncharacterized protein LOC129610052	K03259 EIF4E; translation initiation factor 4E 
E        129611646 eukaryotic translation initiation factor 4E type 2	K03259 EIF4E; translation initiation factor 4E 
E        129611709 eukaryotic translation initiation factor 4E1-like	K03259 EIF4E; translation initiation factor 4E 
E        129613489 eukaryotic translation initiation factor 4E1	K03259 EIF4E; translation initiation factor 4E 
E        129606074 eukaryotic initiation factor 4A	K03257 EIF4A; translation initiation factor 4A 
E        129607121 eukaryotic translation initiation factor 4 gamma	K03260 EIF4G; translation initiation factor 4G 
E        129610351 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        129618469 eukaryotic translation initiation factor 4B isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        129611336 eukaryotic translation initiation factor 4H-like isoform X1	K24086 EIF4H; translation initiation factor 4H 
E        129615068 eukaryotic translation initiation factor 4E-binding protein	K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
E        129606177 protein angel isoform X1	K18729 ANGEL; protein angel 
E        129610323 fragile X messenger ribonucleoprotein 1 homolog	K15516 FMR; fragile X mental retardation protein 
E        129612094 cytoplasmic FMR1-interacting protein	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        129612076 translational regulator orb2	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        129614271 cytoplasmic polyadenylation element-binding protein isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        129609509 ATP-dependent RNA helicase bel	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        129611599 polyadenylate-binding protein	K13126 PABPC; polyadenylate-binding protein 
E        129615087 ELAV-like protein 4	K13126 PABPC; polyadenylate-binding protein 
E        129617883 polyadenylate-binding protein 1A-like	K13126 PABPC; polyadenylate-binding protein 
E        129607431 uncharacterized protein LOC129607431	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        129607167 SKI2 subunit of superkiller complex protein	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        129610233 deformed epidermal autoregulatory factor 1 isoform X1	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        129619104 malignant T-cell-amplified sequence 1 homolog	K07575 MCTS; malignant T-cell-amplified sequence 
E        129618767 density-regulated protein homolog	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
D      Other transport factors
E        129610333 partner of Y14 and mago isoform X1	K14294 WIBG; partner of Y14 and mago 
E        129608105 heterogeneous nuclear ribonucleoprotein 87F-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        129608024 RNA-binding protein Musashi homolog 2-like	K14411 MSI; RNA-binding protein Musashi 
E        129611548 RNA-binding protein Musashi homolog Rbp6 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        129615868 heterogeneous nuclear ribonucleoprotein 27C	K14411 MSI; RNA-binding protein Musashi 
E        129606728 heterogeneous nuclear ribonucleoprotein 27C-like isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        129607896 protein HBS1	K14416 HBS1; elongation factor 1 alpha-like protein 
E        129616577 protein pelota	K06965 PELO; protein pelota 
E        129610985 polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        129605342 DEAD-box helicase Dbp80-like	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        129605363 DEAD-box helicase Dbp80-like isoform X1	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        129614121 pre-mRNA-splicing factor syf1 homolog	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        129609486 SAP domain-containing ribonucleoprotein	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        129606856 regulator of chromosome condensation	K11493 RCC1; regulator of chromosome condensation 
E        129615701 putative uncharacterized protein DDB_G0277255	K18733 LARP6; la-related protein 6 
E        129613717 transcriptional activator protein Pur-alpha	K21772 PURA; transcriptional activator protein Pur-alpha 
E        129614238 polymerase delta-interacting protein 3-like	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        129612497 leukocyte receptor cluster member 8 homolog isoform X1	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        129605859 eukaryotic peptide chain release factor subunit 1 isoform X1	K03265 ETF1; peptide chain release factor subunit 1 
E        129612184 eukaryotic peptide chain release factor GTP-binding subunit ERF3A	K03267 ERF3; peptide chain release factor subunit 3 
E        129606568 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        129608085 regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
D      Protein phosphatase 2A
E        129615044 serine/threonine-protein phosphatase PP2A	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        129615872 serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        129608787 protein phosphatase PP2A 55 kDa regulatory subunit isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        129607376 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        129606383 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        129605733 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        129616249 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        129605635 serine/threonine-protein kinase Smg1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        129606011 nonsense-mediated mRNA decay factor SMG5	K11125 SMG5; protein SMG5 
E        129606295 telomerase-binding protein EST1A	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        129608750 nonsense-mediated mRNA decay factor SMG8	K18734 SMG8; protein SMG8 
E        129606151 protein SMG9	K18735 SMG9; protein SMG9 
E        129606902 selenocysteine insertion sequence-binding protein 2	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        129611235 probable ATP-dependent RNA helicase DHX34	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        129607307 GTP-binding protein 1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        129608900 protein penguin	K14844 PUF6; pumilio homology domain family member 6 
E        129615871 protein bicaudal D	K18739 BICD; protein bicaudal D 
E        129607242 uncharacterized protein LOC129607242	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
E        129606138 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        129616427 actin-5C	K05692 ACTB_G1; actin beta/gamma 1 
E        129617702 uncharacterized protein LOC129617702	K05692 ACTB_G1; actin beta/gamma 1 
E        129609247 T-box transcription factor TBX6L-like	K10180 TBX6; T-box protein 6 
E        129607937 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        129608007 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        129608116 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        129608120 LOW QUALITY PROTEIN: enhancer of split mgamma protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        129608121 enhancer of split mdelta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        129612785 protein hairy	K09090 HESN; hairy and enhancer of split, invertebrate 
E        129606500 protein deadpan	K09090 HESN; hairy and enhancer of split, invertebrate 
D      Trans-acting binding proteins
E        129612683 far upstream element-binding protein 3 isoform X1	K13210 FUBP; far upstream element-binding protein 
E        129607186 elongation factor 1-alpha 1	K03231 EEF1A; elongation factor 1-alpha 
E        129608182 elongation factor 1-alpha 2	K03231 EEF1A; elongation factor 1-alpha 
E        129614492 elongation factor 1-gamma	K03233 EEF1G; elongation factor 1-gamma 
E        129614483 polypyrimidine tract-binding protein 1 isoform X1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        129614398 RNA-binding protein squid isoform X1	K03102 SQD; squid 
E        129612076 translational regulator orb2	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        129614271 cytoplasmic polyadenylation element-binding protein isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        129610323 fragile X messenger ribonucleoprotein 1 homolog	K15516 FMR; fragile X mental retardation protein 
E        129612094 cytoplasmic FMR1-interacting protein	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        129609170 poly(rC)-binding protein 3 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        129615930 CUGBP Elav-like family member 2 isoform X1	K02177 BRU; bruno 
E        129608946 maternal protein exuperantia-1	K18745 EXU; maternal protein exuperantia 
E        129618663 Y-box factor homolog	K09276 YBX1; Y-box-binding protein 1 
E        129606156 Y-box factor homolog	K09276 YBX1; Y-box-binding protein 1 
E        129611438 sex-lethal homolog isoform X1	K18747 SXL; protein sex-lethal 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        129613569 protein argonaute-2	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        129606507 protein argonaute-2 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        129618215 uncharacterized protein LOC129618215	K03259 EIF4E; translation initiation factor 4E 
E        129610052 uncharacterized protein LOC129610052	K03259 EIF4E; translation initiation factor 4E 
E        129611646 eukaryotic translation initiation factor 4E type 2	K03259 EIF4E; translation initiation factor 4E 
E        129611709 eukaryotic translation initiation factor 4E1-like	K03259 EIF4E; translation initiation factor 4E 
E        129613489 eukaryotic translation initiation factor 4E1	K03259 EIF4E; translation initiation factor 4E 
E        129606568 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        129609509 ATP-dependent RNA helicase bel	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        129615046 ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        129606027 RNA-binding protein MEX3B	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        129618663 Y-box factor homolog	K09276 YBX1; Y-box-binding protein 1 
E        129606156 Y-box factor homolog	K09276 YBX1; Y-box-binding protein 1 
E        129605337 LIM domain-containing protein jub-like	K16682 AJUBA; LIM domain-containing protein 
E        129614188 putative helicase mov-10-B.1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        129618384 transportin-1-like	K18752 TNPO1; transportin-1 
E        129612807 transportin-1	K18752 TNPO1; transportin-1 
E        129605635 serine/threonine-protein kinase Smg1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        129606011 nonsense-mediated mRNA decay factor SMG5	K11125 SMG5; protein SMG5 
E        129606295 telomerase-binding protein EST1A	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        129614333 protein bicaudal C	K18756 BICC1; protein bicaudal C 
E        129608105 heterogeneous nuclear ribonucleoprotein 87F-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        129616586 cAMP-dependent protein kinase catalytic subunit 1 isoform X1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        129608805 la-related protein 1 isoform X1	K18757 LARP1; la-related protein 1 
D      P-body specific factors
E        129613187 mRNA-decapping enzyme 1B	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        129619231 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        129609152 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        129613985 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        129612471 uncharacterized protein LOC129612471	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        129615880 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        129610454 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        129615009 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        129615303 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        129606010 kinesin light chain isoform X1	K10407 KLC; kinesin light chain 
E        129609742 tubulin alpha-1A chain	K07374 TUBA; tubulin alpha 
E        129609804 tubulin alpha-1C chain-like	K07374 TUBA; tubulin alpha 
E        129618841 tubulin alpha-1C chain-like	K07374 TUBA; tubulin alpha 
E        129612498 tubulin alpha-1 chain	K07374 TUBA; tubulin alpha 
E        129613668 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        129614733 tubulin alpha-8 chain-like	K07374 TUBA; tubulin alpha 
E        129617530 tubulin alpha chain	K07374 TUBA; tubulin alpha 
E        129612076 translational regulator orb2	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        129614271 cytoplasmic polyadenylation element-binding protein isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        129606801 protein Gawky isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        129616126 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        129613968 regulator of gene activity	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        129609424 CCR4-NOT transcription complex subunit 3-like isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        129615070 putative mediator of RNA polymerase II transcription subunit 26	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        129609978 CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        129613620 CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        129606229 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        129613268 myb-like protein P	K14443 TOB; protein Tob/BTG 
E        129607057 probable serine/threonine-protein kinase tsuA	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        129608656 enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        129610182 enhancer of mRNA-decapping protein 4 homolog	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        129608085 regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        129610836 protein wech	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        129616053 RING finger protein nhl-1 isoform X1	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        129608166 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        129612316 YTH domain-containing family protein	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        129608793 cytotoxic granule associated RNA binding protein TIA1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        129614400 uncharacterized protein LOC129614400 isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        129614494 nucleolysin TIAR isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        129611599 polyadenylate-binding protein	K13126 PABPC; polyadenylate-binding protein 
E        129615087 ELAV-like protein 4	K13126 PABPC; polyadenylate-binding protein 
E        129617883 polyadenylate-binding protein 1A-like	K13126 PABPC; polyadenylate-binding protein 
E        129610323 fragile X messenger ribonucleoprotein 1 homolog	K15516 FMR; fragile X mental retardation protein 
E        129615043 ELAV-like protein 1-A	K13088 ELAVL1; ELAV-like protein 1 
E        129615050 ELAV-like protein 1-A	K13088 ELAVL1; ELAV-like protein 1 
E        129615332 uncharacterized protein LOC129615332	K13088 ELAVL1; ELAV-like protein 1 
E        129615377 ELAV-like protein 2	K13088 ELAVL1; ELAV-like protein 1 
E        129614301 ras GTPase-activating protein-binding protein 1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        129609304 eukaryotic translation initiation factor 2A	K15026 EIF2A; translation initiation factor 2A 
E        129615544 eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        129606074 eukaryotic initiation factor 4A	K03257 EIF4A; translation initiation factor 4A 
E        129607843 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        129618469 eukaryotic translation initiation factor 4B isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        129607121 eukaryotic translation initiation factor 4 gamma	K03260 EIF4G; translation initiation factor 4G 
E        129610351 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        129615035 ribosomal protein S6 kinase 2 beta	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        129615121 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        129619371 nuclear RNA export factor 1	K14284 NXF; nuclear RNA export factor 
E        129619168 histone deacetylase 6 isoform X1	K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        129613187 mRNA-decapping enzyme 1B	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        129615046 ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        129608656 enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        129610182 enhancer of mRNA-decapping protein 4 homolog	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        129607057 probable serine/threonine-protein kinase tsuA	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        129619231 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        129609152 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        129613985 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        129612471 uncharacterized protein LOC129612471	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        129615880 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        129610454 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        129615009 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        129615303 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        129609566 5'-3' exoribonuclease 2 homolog	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
E        129609520 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        129613956 probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        129605381 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
E        129611399 exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        129607550 exosome complex component RRP40	K03681 RRP40; exosome complex component RRP40 
E        129618186 uncharacterized protein LOC129618186	K11600 RRP41; exosome complex component RRP41 
E        129612271 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        129612049 exosome complex component RRP46	K12590 RRP46; exosome complex component RRP46 
E        129607950 uncharacterized protein LOC129607950	K12587 MTR3; exosome complex component MTR3 
E        129611149 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
E        129618344 uncharacterized protein LOC129618344	K12586 RRP43; exosome complex component RRP43 
E        129613970 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        129605366 uncharacterized protein LOC129605366	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        129609575 exosome complex exonuclease RRP44	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        129618293 LOW QUALITY PROTEIN: uncharacterized protein LOC129618293	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        129616637 exosome component 10 isoform X1	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        129606352 M-phase phosphoprotein 6	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        129606545 non-canonical poly(A) RNA polymerase protein Trf4-1-like	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        129612424 exosome RNA helicase MTR4	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        129607167 SKI2 subunit of superkiller complex protein	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        129615704 tetratricopeptide repeat protein 37	K12600 SKI3; superkiller protein 3 
E        129614425 LOW QUALITY PROTEIN: SKI8 subunit of superkiller complex protein	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        129609978 CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        129616126 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        129613968 regulator of gene activity	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        129609424 CCR4-NOT transcription complex subunit 3-like isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        129615070 putative mediator of RNA polymerase II transcription subunit 26	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        129613620 CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        129611058 CCR4-NOT transcription complex subunit 9	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        129617280 LOW QUALITY PROTEIN: uncharacterized protein LOC129617280	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        129611727 CCR4-NOT transcription complex subunit 10	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        129606229 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
D      Other 3'-5' decay factors
E        129615041 ATP-dependent DNA/RNA helicase DHX36-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        129615564 ATP-dependent DNA/RNA helicase DHX36	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        129613268 myb-like protein P	K14443 TOB; protein Tob/BTG 
E        129610210 nocturnin isoform X1	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        129609520 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        129618692 2',5'-phosphodiesterase 12 isoform X1	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        129613956 probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    Other degradation factors
D      RNases
E        129606247 probable ribonuclease ZC3H12C isoform X1	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        129615841 ribonuclease 3	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        129611685 probable oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        129619342 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        129614327 polyribonucleotide nucleotidyltransferase 1, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        129611251 ATP-dependent 6-phosphofructokinase isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        129606707 heat shock 70 kDa protein cognate 5	K04043 dnaK; molecular chaperone DnaK 
E        129614783 heat shock protein 60A	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        129611399 exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        129605381 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        129618186 uncharacterized protein LOC129618186	K11600 RRP41; exosome complex component RRP41 
E        129612271 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        129611149 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
D      Others
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: April 25, 2024