+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Cucurbita moschata (crookneck pumpkin)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 111446362 mRNA cap guanine-N7 methyltransferase 1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 111449271 mRNA cap guanine-N7 methyltransferase 2 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 111438145 mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 111453716 mRNA-capping enzyme-like isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 111430020 cyclin-dependent kinase D-3-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 111435785 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
D Cap binding complex
E 111461363 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 111437775 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 111451051 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
E 111448282 nuclear cap-binding protein subunit 2-like isoform X1 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 111432181 pre-mRNA cleavage factor Im 25 kDa subunit 2 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111453755 pre-mRNA cleavage factor Im 25 kDa subunit 2-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111450684 pre-mRNA cleavage factor Im 25 kDa subunit 1-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111444047 pre-mRNA cleavage factor Im 25 kDa subunit 1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111446757 uncharacterized protein LOC111446757 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 111442737 cleavage and polyadenylation specificity factor subunit CG7185-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 111442738 cleavage and polyadenylation specificity factor subunit 6-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 111430040 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 111457064 polyadenylation and cleavage factor homolog 4-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 111440036 polyadenylation and cleavage factor homolog 4-like isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 111441800 uncharacterized protein LOC111441800 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 111442777 uncharacterized protein LOC111442777 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 111439584 cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 111430467 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 111449842 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111458343 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111434076 30-kDa cleavage and polyadenylation specificity factor 30-like K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 111457116 30-kDa cleavage and polyadenylation specificity factor 30-like K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 111445522 uncharacterized protein LOC111445522 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 111445002 flowering time control protein FY-like isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 111464157 flowering time control protein FY-like isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 111442338 protein ANTHESIS POMOTING FACTOR 1 isoform X1 K14962 WDR82; COMPASS component SWD2
E 111433621 protein ANTHESIS POMOTING FACTOR 1 isoform X1 K14962 WDR82; COMPASS component SWD2
E 111446897 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111458264 serine/threonine-protein phosphatase PP1 isozyme 4-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111440901 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111442108 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111450598 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111447890 serine/threonine-protein phosphatase PP1 isozyme 4-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111461641 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111445282 serine/threonine-protein phosphatase PP1 isozyme 4 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111447456 serine/threonine-protein phosphatase PP1 isozyme 3-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111443914 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111452263 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 111431271 cleavage stimulation factor subunit 50 isoform X1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 111445495 cleavage stimulating factor 64-like isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 111464146 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 111432400 cleavage stimulation factor subunit 77 K14408 CSTF3; cleavage stimulation factor subunit 3
E 111443713 symplekin-like isoform X1 K06100 SYMPK; symplekin
E 111446048 symplekin isoform X1 K06100 SYMPK; symplekin
E 111453255 symplekin isoform X1 K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 111433699 small nuclear ribonucleoprotein-associated protein B'-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 111433057 small nuclear ribonucleoprotein-associated protein B'-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 111443497 small nuclear ribonucleoprotein SmD3b-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 111446231 small nuclear ribonucleoprotein SmD3b-like isoform X1 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 111438400 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 111435765 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 111429915 small nuclear ribonucleoprotein E-like isoform X1 K11097 SNRPE; small nuclear ribonucleoprotein E
E 111454427 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 111462396 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 111432957 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 111463232 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 111430467 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 111449842 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111458343 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111445495 cleavage stimulating factor 64-like isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 111464146 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 111443713 symplekin-like isoform X1 K06100 SYMPK; symplekin
E 111446048 symplekin isoform X1 K06100 SYMPK; symplekin
E 111453255 symplekin isoform X1 K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E 111451985 transcription elongation factor SPT4 homolog 2 K15171 SUPT4H1; transcription elongation factor SPT4
E 111445423 putative transcription elongation factor SPT5 homolog 1 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
E 111458546 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 111453835 N6-adenosine-methyltransferase MT-A70-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 111431216 N6-adenosine-methyltransferase MT-A70-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 111447933 methyltransferase-like protein 1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 111430660 methyltransferase-like protein 1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 111455141 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 111429961 FKBP12-interacting protein of 37 kDa-like K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 111441245 FKBP12-interacting protein of 37 kDa-like isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 111459341 filaggrin-like K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111430427 uncharacterized protein LOC111430427 isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111441395 E3 ubiquitin-protein ligase Hakai-like K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
E 111442234 E3 ubiquitin-protein ligase Hakai-like K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 111455805 nuclear poly(A) polymerase 4-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111457031 nuclear poly(A) polymerase 1-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111462377 nuclear poly(A) polymerase 4-like isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111431562 nuclear poly(A) polymerase 1-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111464314 nuclear poly(A) polymerase 4-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E 111433536 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 111433303 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 111463879 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 111441921 zinc finger CCCH domain-containing protein 41-like K13192 RBM26; RNA-binding protein 26
E 111435142 zinc finger CCCH domain-containing protein 41-like K13192 RBM26; RNA-binding protein 26
E 111461049 uncharacterized protein LOC111461049 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 111433825 uncharacterized protein LOC111433825 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 111456041 uncharacterized protein LOC111456041 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 111453671 uncharacterized protein LOC111453671 isoform X1 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
C Other processing factors
D 111435177 KIN17-like protein K13102 KIN; DNA/RNA-binding protein KIN17
D 111457548 methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 111461600 serrate RNA effector molecule-like K27103 SRRT; serrate RNA effector molecule
D 111438309 serrate RNA effector molecule-like K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 111461789 RNA-binding protein Y14-like K12876 RBM8A; RNA-binding protein 8A
E 111437784 RNA-binding protein Y14-like K12876 RBM8A; RNA-binding protein 8A
E 111452479 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 111441228 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 111452298 THO complex subunit 4A-like isoform X1 K12881 THOC4; THO complex subunit 4
E 111442248 THO complex subunit 4D-like K12881 THOC4; THO complex subunit 4
E 111464665 THO complex subunit 4B-like K12881 THOC4; THO complex subunit 4
E 111451345 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 111462573 DEAD-box ATP-dependent RNA helicase 56 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 111454236 DEAD-box ATP-dependent RNA helicase 56-like K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 111442104 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111452540 eukaryotic initiation factor 4A-3-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111450421 histone deacetylase complex subunit SAP18-like K14324 SAP18; histone deacetylase complex subunit SAP18
E 111448519 histone deacetylase complex subunit SAP18-like K14324 SAP18; histone deacetylase complex subunit SAP18
E 111430764 pinin K13114 PNN; pinin
E 111435887 histone acetyltransferase KAT6A-like isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 111447305 apoptotic chromatin condensation inducer in the nucleus-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 111443390 serine/arginine-rich splicing factor SR45-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 111445960 serine/arginine-rich splicing factor SR45-like isoform X1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 111452247 serine/arginine repetitive matrix protein 1-like K13171 SRRM1; serine/arginine repetitive matrix protein 1
E 111464695 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 111449893 THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 111459846 THO complex subunit 2-like isoform X1 K12879 THOC2; THO complex subunit 2
E 111444859 THO complex subunit 2-like isoform X1 K12879 THOC2; THO complex subunit 2
E 111450715 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 111452298 THO complex subunit 4A-like isoform X1 K12881 THOC4; THO complex subunit 4
E 111442248 THO complex subunit 4D-like K12881 THOC4; THO complex subunit 4
E 111464665 THO complex subunit 4B-like K12881 THOC4; THO complex subunit 4
E 111451345 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 111445974 THO complex subunit 5B K13174 THOC5; THO complex subunit 5
E 111441243 THO complex subunit 6 K13175 THOC6; THO complex subunit 6
E 111448358 THO complex subunit 7A-like K13176 THOC7; THO complex subunit 7
E 111451841 THO complex subunit 7A-like K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 111444072 enhanced ethylene response protein 5 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 111431292 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111457056 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111450464 protein DSS1 HOMOLOG ON CHROMOSOME V-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111454218 protein DSS1 HOMOLOG ON CHROMOSOME V-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111454046 transcription and mRNA export factor SUS1 K11368 ENY2; enhancer of yellow 2 transcription factor
E 111458862 SAC3 family protein C K23719 SAC3; nuclear mRNA export protein SAC3
E 111457572 SAC3 family protein B K23719 SAC3; nuclear mRNA export protein SAC3
D Nuclear pore complex
E 111455457 nuclear-pore anchor isoform X1 K09291 TPR; nucleoprotein TPR
E 111457513 protein RAE1-like K14298 RAE1; mRNA export factor
E 111442431 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 111440929 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 111457822 protein transport protein SEC13 homolog B K14004 SEC13; protein transport protein SEC13
E 111464548 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 111454690 nuclear pore complex protein NUP85 K14304 NUP85; nuclear pore complex protein Nup85
E 111444145 nuclear pore complex protein NUP43 K14305 NUP43; nuclear pore complex protein Nup43
E 111430301 uncharacterized protein LOC111430301 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 111449684 nuclear pore complex protein NUP54 K14308 NUP54; nuclear pore complex protein Nup54
E 111458857 nuclear pore complex protein NUP54-like K14308 NUP54; nuclear pore complex protein Nup54
E 111460276 nuclear pore complex protein NUP62 isoform X1 K14306 NUP62; nuclear pore complex protein Nup62
E 111458346 nuclear pore complex protein NUP88-like K14318 NUP88; nuclear pore complex protein Nup88
E 111447977 nuclear pore complex protein NUP88-like K14318 NUP88; nuclear pore complex protein Nup88
E 111441561 nuclear pore complex protein NUP93A-like K14309 NUP93; nuclear pore complex protein Nup93
E 111459484 nuclear pore complex protein NUP96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 111448468 nuclear pore complex protein NUP98A-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 111459600 nuclear pore complex protein NUP98A-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 111456566 nuclear pore complex protein NUP107 K14301 NUP107; nuclear pore complex protein Nup107
E 111455584 nuclear pore complex protein NUP133 isoform X1 K14300 NUP133; nuclear pore complex protein Nup133
E 111451342 uncharacterized protein LOC111451342 K14311 NUP188; nuclear pore complex protein Nup188
E 111447412 nuclear pore complex protein NUP155 K14312 NUP155; nuclear pore complex protein Nup155
E 111435647 nuclear pore complex protein NUP160 K14303 NUP160; nuclear pore complex protein Nup160
E 111456575 nuclear pore complex protein NUP35 K14313 NUP35; nuclear pore complex protein Nup53
E 111444365 nuclear pore complex protein NUP205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 111441535 nuclear pore complex protein GP210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 111449495 nuclear pore complex protein NUP214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 111452960 nuclear pore complex protein NUP58 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 111463519 nuclear pore complex protein NUP58-like K14307 NUPL1; nucleoporin p58/p45
E 111432532 zinc finger CCCH domain-containing protein 16 isoform X1 K14321 NUPL2; nucleoporin-like protein 2
E 111433165 uncharacterized protein LOC111433165 K14315 NDC1; nucleoporin NDC1
E 111433630 uncharacterized protein LOC111433630 isoform X1 K14315 NDC1; nucleoporin NDC1
E 111447274 protein SEH1 K14299 SEH1; nucleoporin SEH1
E 111441364 aladin K14320 AAAS; aladin
E 111458652 protein GLE1 isoform X1 K18723 GLE1; nucleoporin GLE1
D Ran-mediated transport factors
E 111439342 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111439353 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 111461562 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111461563 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111461564 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111454572 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111462434 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111431435 plant UBX domain-containing protein 10-like isoform X1 K18726 FAF2; FAS-associated factor 2
E 111435729 plant UBX domain-containing protein 10-like K18726 FAF2; FAS-associated factor 2
E 111459711 plant UBX domain-containing protein 10-like K18726 FAF2; FAS-associated factor 2
E 111463282 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 111436026 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 111444846 cell division control protein 48 homolog D-like K13525 VCP; transitional endoplasmic reticulum ATPase
E 111433305 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 111441926 cell division control protein 48 homolog E K13525 VCP; transitional endoplasmic reticulum ATPase
E 111431122 protein N-lysine methyltransferase METTL21A-like K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 111448568 protein-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 111450981 protein-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 111430482 protein EXPORTIN 1A-like K14290 XPO1; exportin-1
E 111447823 protein EXPORTIN 1A K14290 XPO1; exportin-1
E 111462604 exportin-7-like isoform X1 K18460 XPO7; exportin-7
E 111454221 exportin-7-like isoform X1 K18460 XPO7; exportin-7
E 111449344 RAN GTPase-activating protein 2-like K14319 RANGAP1; Ran GTPase-activating protein 1
E 111457764 RAN GTPase-activating protein 2-like K14319 RANGAP1; Ran GTPase-activating protein 1
E 111461021 RAN GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 111460287 eukaryotic translation initiation factor-like K03259 EIF4E; translation initiation factor 4E
E 111456920 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 111434284 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 111464472 eukaryotic translation initiation factor-like K03259 EIF4E; translation initiation factor 4E
E 111436995 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E
E 111462654 eukaryotic initiation factor 4A-15-like K03257 EIF4A; translation initiation factor 4A
E 111457739 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A
E 111456244 eukaryotic initiation factor 4A-11-like K03257 EIF4A; translation initiation factor 4A
E 111452380 eukaryotic initiation factor 4A-8-like K03257 EIF4A; translation initiation factor 4A
E 111464232 eukaryotic initiation factor 4A-11 K03257 EIF4A; translation initiation factor 4A
E 111446342 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111446016 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 111443046 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111439174 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 111460421 eukaryotic translation initiation factor 4G isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111464325 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111429890 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G
E 111461814 protein PIR isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 111448456 DEAD-box ATP-dependent RNA helicase 37-like isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111459788 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111456622 uncharacterized protein LOC111456622 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111460759 uncharacterized protein LOC111460759 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111456607 30S ribosomal protein 2, chloroplastic-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 111442260 LOW QUALITY PROTEIN: polyadenylate-binding protein 7-like K13126 PABPC; polyadenylate-binding protein
E 111445344 polyadenylate-binding protein 3-like K13126 PABPC; polyadenylate-binding protein
E 111455064 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 111434661 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 111461096 polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 111430615 polyadenylate-binding protein 8-like K13126 PABPC; polyadenylate-binding protein
E 111447895 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 111460708 30S ribosomal protein 2, chloroplastic-like K13126 PABPC; polyadenylate-binding protein
E 111452275 DExH-box ATP-dependent RNA helicase DExH11 isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 111462086 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence
E 111441062 translation machinery-associated protein 22-like K24272 DENR; density-regulated protein
E 111461628 translation machinery-associated protein 22-like K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E 111437835 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago
E 111455616 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago
E 111430026 glycine-rich RNA-binding protein 3, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111434903 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111446490 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111435320 heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111446005 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111447049 UBP1-associated protein 2B-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111435983 UBP1-associated protein 2B-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111464402 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111441349 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111441536 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111451162 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111447112 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111440991 glycine-rich RNA-binding protein 2, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111430581 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111442795 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111456883 glycine-rich RNA-binding protein 4, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111460283 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111438739 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111432644 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111462511 heterogeneous nuclear ribonucleoprotein 1-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111434205 heterogeneous nuclear ribonucleoprotein 1-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111446397 RNA-binding protein 1-like K14411 MSI; RNA-binding protein Musashi
E 111451705 RNA-binding protein Musashi homolog 2-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111451738 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111449066 heterogeneous nuclear ribonucleoprotein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111438656 heterogeneous nuclear ribonucleoprotein D0-like K14411 MSI; RNA-binding protein Musashi
E 111437391 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111463883 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111464301 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111443126 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 111439954 protein PELOTA 1 K06965 PELO; protein pelota
E 111447876 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 111435898 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 111447055 polyadenylate-binding protein 1-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 111430800 polyadenylate-binding protein 2-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 111463324 polyadenylate-binding protein 3-like K14396 PABPN1; polyadenylate-binding protein 2
E 111430545 polyadenylate-binding protein 1-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 111442167 DEAD-box ATP-dependent RNA helicase 38 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 111453335 pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 111453127 protein MODIFIER OF SNC1 11-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 111463338 protein MODIFIER OF SNC1 11-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 111441859 protein MODIFIER OF SNC1 11-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 111436059 transcription factor Pur-alpha 1-like K21772 PURA; transcriptional activator protein Pur-alpha
E 111461388 transcription factor Pur-alpha 1-like K21772 PURA; transcriptional activator protein Pur-alpha
E 111461673 zinc finger CCCH domain-containing protein 34-like isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 111440864 zinc finger CCCH domain-containing protein 32-like isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 111458194 SAC3 family protein A-like isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
E 111447516 SAC3 family protein A-like isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 111461184 eukaryotic peptide chain release factor subunit 1-3-like K03265 ETF1; peptide chain release factor subunit 1
E 111455832 eukaryotic peptide chain release factor subunit 1-3 K03265 ETF1; peptide chain release factor subunit 1
E 111457086 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3
E 111431604 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 111431113 regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111442920 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111458622 regulator of nonsense transcripts UPF2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111445073 regulator of nonsense transcripts UPF2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111432763 regulator of nonsense transcripts UPF3-like K14328 UPF3; regulator of nonsense transcripts 3
E 111452331 regulator of nonsense transcripts UPF3-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 111448299 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111454384 serine/threonine-protein phosphatase PP2A-2 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111435461 serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111458460 serine/threonine-protein phosphatase PP2A catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111432366 serine/threonine-protein phosphatase PP2A-4 catalytic subunit isoform X1 K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111450537 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111459790 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111449622 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 111458482 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 111435256 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111458062 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111456210 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111464372 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111452369 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111460292 probable serine/threonine protein phosphatase 2A regulatory subunit B''delta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111446401 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111436190 serine/threonine protein phosphatase 2A regulatory subunit B''beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111443963 serine/threonine protein phosphatase 2A regulatory subunit B''beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111444109 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111450438 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111451624 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111433049 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111444815 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111462718 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111454096 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111457354 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111454208 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111436204 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111463212 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 111448933 serine/threonine-protein kinase SMG1-like isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 111461458 protein SMG7-like K14409 SMG7; protein SMG7
E 111436815 protein SMG7-like K14409 SMG7; protein SMG7
E 111459538 uncharacterized protein LOC111459538 K18734 SMG8; protein SMG8
E 111442489 protein SMG9-like K18735 SMG9; protein SMG9
E 111456622 uncharacterized protein LOC111456622 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111460759 uncharacterized protein LOC111460759 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
C Factors involved in mRNA localization
D Cargo complex
E 111436931 pumilio homolog 24 K14844 PUF6; pumilio homology domain family member 6
E 111460975 myosin-12-like K10357 MYO5; myosin V
E 111455977 myosin-11-like K10357 MYO5; myosin V
E 111436922 myosin-17-like K10357 MYO5; myosin V
E 111450705 myosin-11-like isoform X1 K10357 MYO5; myosin V
E 111442995 myosin-2-like K10357 MYO5; myosin V
E 111446433 myosin-2-like K10357 MYO5; myosin V
E 111461569 myosin-17-like K10357 MYO5; myosin V
E 111455819 myosin-12 isoform X1 K10357 MYO5; myosin V
E 111462475 myosin-15 isoform X1 K10357 MYO5; myosin V
E 111456019 myosin-6-like K10357 MYO5; myosin V
E 111444166 myosin-11 isoform X1 K10357 MYO5; myosin V
E 111447924 myosin-6-like isoform X1 K10357 MYO5; myosin V
E 111460810 myosin-9 isoform X1 K10357 MYO5; myosin V
E 111460860 myosin-6-like isoform X1 K10357 MYO5; myosin V
E 111462393 exosome complex exonuclease rrp6-like isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 111454125 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
D Trans-acting binding proteins
E 111432672 far upstream element-binding protein 1-like K13210 FUBP; far upstream element-binding protein
E 111455107 far upstream element-binding protein 2-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 111462896 far upstream element-binding protein 1 K13210 FUBP; far upstream element-binding protein
E 111454679 far upstream element-binding protein 1-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 111452148 far upstream element-binding protein 2-like K13210 FUBP; far upstream element-binding protein
E 111434504 far upstream element-binding protein 1-like K13210 FUBP; far upstream element-binding protein
E 111448516 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111451670 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111444841 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111444842 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 111460404 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111464329 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111436431 elongation factor 1-gamma-like isoform X1 K03233 EEF1G; elongation factor 1-gamma
E 111453009 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 111447557 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 111435990 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 111442093 probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
D Other mRNA localization factors
E 111461814 protein PIR isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 111449824 RNA-binding KH domain-containing protein RCF3-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111433674 KH domain-containing protein At4g18375-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111444285 RNA-binding KH domain-containing protein PEPPER-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111434650 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111444152 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111443416 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111433193 KH domain-containing protein At4g18375-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111460387 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111444879 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111436202 RNA-binding KH domain-containing protein PEPPER-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111456570 KH domain-containing protein HEN4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111459820 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111460958 flowering locus K homology domain-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111430831 RNA-binding KH domain-containing protein RCF3-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111450297 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111455341 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 111431419 protein argonaute 1-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111454846 LOW QUALITY PROTEIN: protein argonaute 16-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111449809 protein argonaute 7-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111452895 protein argonaute 1-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111458222 protein argonaute 7-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111451413 protein argonaute 10-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111459479 protein argonaute 4-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111437218 protein argonaute 16-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111448493 protein argonaute 4-like isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111457947 protein argonaute 10-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111464716 protein argonaute 5 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111437044 protein argonaute PNH1-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111460287 eukaryotic translation initiation factor-like K03259 EIF4E; translation initiation factor 4E
E 111456920 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 111434284 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 111464472 eukaryotic translation initiation factor-like K03259 EIF4E; translation initiation factor 4E
E 111436995 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E
E 111431113 regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111442920 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111448456 DEAD-box ATP-dependent RNA helicase 37-like isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111459788 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111446001 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111431941 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111449329 protein decapping 5-like K18749 LSM14; protein LSM14
E 111436605 protein decapping 5-like isoform X1 K18749 LSM14; protein LSM14
E 111446404 protein decapping 5-like K18749 LSM14; protein LSM14
E 111435726 protein decapping 5-like K18749 LSM14; protein LSM14
E 111458590 protein decapping 5-like K18749 LSM14; protein LSM14
E 111444678 probable RNA helicase SDE3 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111444680 uncharacterized protein LOC111444680 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111436784 probable RNA helicase SDE3 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111451780 transportin-1-like K18752 TNPO1; transportin-1
E 111448889 transportin-1-like K18752 TNPO1; transportin-1
E 111448933 serine/threonine-protein kinase SMG1-like isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 111461458 protein SMG7-like K14409 SMG7; protein SMG7
E 111436815 protein SMG7-like K14409 SMG7; protein SMG7
E 111436459 uncharacterized protein LOC111436459 isoform X1 K18753 ZFP36L; butyrate response factor
E 111444951 zinc finger CCCH domain-containing protein 15-like isoform X1 K18753 ZFP36L; butyrate response factor
E 111458383 zinc finger CCCH domain-containing protein 14-like K18753 ZFP36L; butyrate response factor
E 111436579 uncharacterized protein LOC111436579 isoform X1 K18753 ZFP36L; butyrate response factor
E 111430026 glycine-rich RNA-binding protein 3, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111434903 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111446490 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111435320 heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111446005 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111447049 UBP1-associated protein 2B-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111435983 UBP1-associated protein 2B-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111464402 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111441349 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111441536 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111451162 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111447112 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111440991 glycine-rich RNA-binding protein 2, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111430581 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111442795 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111456883 glycine-rich RNA-binding protein 4, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111459403 la-related protein 1A K18757 LARP1; la-related protein 1
E 111453425 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 111448734 LOW QUALITY PROTEIN: la-related protein 1A-like K18757 LARP1; la-related protein 1
E 111453192 la-related protein 1C-like isoform X1 K18757 LARP1; la-related protein 1
E 111433580 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 111446461 la-related protein 1C-like K18757 LARP1; la-related protein 1
D P-body specific factors
E 111458180 mRNA-decapping enzyme subunit 2-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111464573 mRNA-decapping enzyme subunit 2-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111433245 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111463459 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111456650 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111457720 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111464261 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111437386 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111463792 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111445386 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111455423 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111433469 sm-like protein LSM4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111442734 sm-like protein LSM4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111437295 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111463894 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111447731 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111447304 sm-like protein LSM36B isoform X1 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111441416 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111452019 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111457194 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 111460975 myosin-12-like K10357 MYO5; myosin V
E 111455977 myosin-11-like K10357 MYO5; myosin V
E 111436922 myosin-17-like K10357 MYO5; myosin V
E 111450705 myosin-11-like isoform X1 K10357 MYO5; myosin V
E 111442995 myosin-2-like K10357 MYO5; myosin V
E 111446433 myosin-2-like K10357 MYO5; myosin V
E 111461569 myosin-17-like K10357 MYO5; myosin V
E 111455819 myosin-12 isoform X1 K10357 MYO5; myosin V
E 111462475 myosin-15 isoform X1 K10357 MYO5; myosin V
E 111456019 myosin-6-like K10357 MYO5; myosin V
E 111444166 myosin-11 isoform X1 K10357 MYO5; myosin V
E 111447924 myosin-6-like isoform X1 K10357 MYO5; myosin V
E 111460810 myosin-9 isoform X1 K10357 MYO5; myosin V
E 111460860 myosin-6-like isoform X1 K10357 MYO5; myosin V
E 111448780 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 111436987 tubulin alpha-3 chain-like K07374 TUBA; tubulin alpha
E 111434601 tubulin alpha-4 chain K07374 TUBA; tubulin alpha
E 111447383 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 111439152 tubulin alpha-3 chain-like K07374 TUBA; tubulin alpha
E 111453759 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 111454877 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 111430659 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 111463623 tubulin alpha chain K07374 TUBA; tubulin alpha
E 111449221 CCR4-NOT transcription complex subunit 1-like isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111432166 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111451091 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111451093 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111448793 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111439249 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111439142 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111448316 uncharacterized protein LOC111448316 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111451202 uncharacterized protein LOC111451202 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111441499 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111435560 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111444853 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111443256 carbon catabolite repressor protein 4 homolog 4 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111451625 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111451626 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111462726 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111462886 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111463977 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111454439 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111454440 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111459188 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111449978 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111435626 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111463978 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111444646 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 111464416 DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 111443142 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111437511 uncharacterized protein LOC111437511 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111445957 uncharacterized protein LOC111445957 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111447147 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111438721 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 111458622 regulator of nonsense transcripts UPF2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111445073 regulator of nonsense transcripts UPF2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111432763 regulator of nonsense transcripts UPF3-like K14328 UPF3; regulator of nonsense transcripts 3
E 111452331 regulator of nonsense transcripts UPF3-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 111440900 DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 111431229 DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 111445199 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 111460233 uncharacterized protein LOC111460233 K20102 YTHDF; YTH domain-containing family protein
E 111461656 uncharacterized protein LOC111461656 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 111433388 uncharacterized protein LOC111433388 isoform X1 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 111456407 oligouridylate-binding protein 1B-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 111457671 oligouridylate-binding protein 1B-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 111443912 oligouridylate-binding protein 1-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 111450279 oligouridylate-binding protein 1-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 111464510 oligouridylate-binding protein 1B-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 111456607 30S ribosomal protein 2, chloroplastic-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 111442260 LOW QUALITY PROTEIN: polyadenylate-binding protein 7-like K13126 PABPC; polyadenylate-binding protein
E 111445344 polyadenylate-binding protein 3-like K13126 PABPC; polyadenylate-binding protein
E 111455064 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 111434661 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 111461096 polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 111430615 polyadenylate-binding protein 8-like K13126 PABPC; polyadenylate-binding protein
E 111447895 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 111460708 30S ribosomal protein 2, chloroplastic-like K13126 PABPC; polyadenylate-binding protein
E 111430061 ras GTPase-activating protein-binding protein 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 111440891 ras GTPase-activating protein-binding protein 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 111457778 eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A
E 111438955 eukaryotic translation initiation factor 3 subunit B-like isoform X1 K03253 EIF3B; translation initiation factor 3 subunit B
E 111439034 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 111462654 eukaryotic initiation factor 4A-15-like K03257 EIF4A; translation initiation factor 4A
E 111457739 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A
E 111456244 eukaryotic initiation factor 4A-11-like K03257 EIF4A; translation initiation factor 4A
E 111452380 eukaryotic initiation factor 4A-8-like K03257 EIF4A; translation initiation factor 4A
E 111464232 eukaryotic initiation factor 4A-11 K03257 EIF4A; translation initiation factor 4A
E 111442104 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111452540 eukaryotic initiation factor 4A-3-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111446342 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111446016 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 111443046 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111439174 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 111460421 eukaryotic translation initiation factor 4G isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111464325 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111429890 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G
E 111439215 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 111429928 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 111461813 tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 111433245 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111463459 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111458180 mRNA-decapping enzyme subunit 2-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111464573 mRNA-decapping enzyme subunit 2-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111446001 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111431941 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111438721 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 111443142 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111437511 uncharacterized protein LOC111437511 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111445957 uncharacterized protein LOC111445957 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111447147 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 111456650 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111457720 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111464261 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111437386 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111463792 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111445386 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111455423 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111433469 sm-like protein LSM4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111442734 sm-like protein LSM4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111437295 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111463894 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111447731 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111447304 sm-like protein LSM36B isoform X1 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111441416 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111452019 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111457194 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 111454256 5'-3' exoribonuclease 3-like K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 111450621 5'-3' exoribonuclease 4 isoform X1 K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-]
D Other 5'-3' decay factors
C 3'-5' decay
D Core exosome factors
E 111441251 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 111437483 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 111464056 exosome complex component RRP4 homolog isoform X1 K03679 RRP4; exosome complex component RRP4
E 111433176 putative exosome complex component rrp40 K03681 RRP40; exosome complex component RRP40
E 111429887 putative exosome complex component rrp40 K03681 RRP40; exosome complex component RRP40
E 111446911 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 111454378 exosome complex exonuclease RRP46 homolog K12590 RRP46; exosome complex component RRP46
E 111449089 exosome complex component RRP41-like K12587 MTR3; exosome complex component MTR3
E 111434693 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 111435558 exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 111461486 exosome complex component RRP45A-like K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 111434671 exosome complex exonuclease RRP44 homolog A-like K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 111455103 exosome complex exonuclease RRP44 homolog A-like K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 111453438 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 111432526 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 111445751 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1
E 111442695 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1
E 111448524 uncharacterized protein LOC111448524 isoform X1 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 111451657 uncharacterized protein LOC111451657 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 111443297 non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 111460149 DExH-box ATP-dependent RNA helicase DExH9-like K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E 111464445 DExH-box ATP-dependent RNA helicase DExH9-like isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E 111436255 DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 111452275 DExH-box ATP-dependent RNA helicase DExH11 isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 111442802 tetratricopeptide repeat protein SKI3 isoform X1 K12600 SKI3; superkiller protein 3
E 111461552 WD repeat-containing protein VIP3 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 111441499 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111435560 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111444853 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111443256 carbon catabolite repressor protein 4 homolog 4 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111449221 CCR4-NOT transcription complex subunit 1-like isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111432166 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111451091 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111451093 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111448793 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111439249 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111439142 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111448316 uncharacterized protein LOC111448316 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111451202 uncharacterized protein LOC111451202 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111451625 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111451626 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111462726 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111462886 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111463977 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111454439 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111454440 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111459188 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111449978 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111435626 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111463978 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111455057 CCR4-NOT transcription complex subunit 9-like isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 111446310 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 111442939 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 111461648 CCR4-NOT transcription complex subunit 10-like K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E 111437239 CCR4-NOT transcription complex subunit 10-like isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E 111462046 ABC transporter I family member 20 K12608 CAF16; CCR4-NOT complex subunit CAF16
E 111456494 ABC transporter I family member 19-like K12608 CAF16; CCR4-NOT complex subunit CAF16
D Pan complex
D Other 3'-5' decay factors
E 111456191 poly(A)-specific ribonuclease PARN-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111438751 poly(A)-specific ribonuclease PARN isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111462417 uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111437674 DExH-box ATP-dependent RNA helicase DExH6-like isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111441971 DExH-box ATP-dependent RNA helicase DExH1 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111447032 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111458384 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111429870 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111449254 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111458570 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111462643 uncharacterized protein LOC111462643 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 111454139 3'-5' exoribonuclease 1-like isoform X1 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 111431485 protein NRDE2 homolog isoform X1 K26109 NRDE2; nuclear exosome regulator NRDE2
E 111435141 protein RST1 isoform X1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 111459134 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
E 111432359 uncharacterized protein LOC111432359 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Other RNA degradosome components
E 111452790 cytosolic enolase 3 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111437858 enolase 1, chloroplastic K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111463425 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111430677 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111433186 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111441489 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 111435245 polyribonucleotide nucleotidyltransferase 2, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 111447341 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111453612 ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111447909 ATP-dependent 6-phosphofructokinase 4, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111435953 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111461629 ATP-dependent 6-phosphofructokinase 7-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111441125 ATP-dependent 6-phosphofructokinase 7-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111452403 ATP-dependent 6-phosphofructokinase 3-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 111430597 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 111447951 heat shock 70 kDa protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 111460590 chaperonin CPN60-2, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111455859 chaperonin CPN60-like 2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111460315 chaperonin CPN60-1, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111461463 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111437173 ruBisCO large subunit-binding protein subunit beta, chloroplastic K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111449606 chaperonin 60 subunit beta 4, chloroplastic-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111464468 chaperonin CPN60-2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 111437483 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 111464056 exosome complex component RRP4 homolog isoform X1 K03679 RRP4; exosome complex component RRP4
E 111441251 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 111446911 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 111434693 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024