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Transcription Machinery - Clostridium neonatale
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E CNEO_0245 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E CNEO_0205 rpoB; DNA-directed RNA polymerase subunit beta' K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E CNEO_3384 rpoZ; DNA-directed RNA polymerase subunit omega (RNAP omega subunit) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E CNEO_3748 sigA; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E CNEO_4012 csfV; ECF RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CNEO_4151 Putative ECF RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CNEO_2255 Putative ECF RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CNEO_2485 sigV; ECF RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CNEO_2750 Putative RNA polymerase ECF K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CNEO_4689 Putative ECF RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CNEO_2490 ECF RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CNEO_3671 Putative ECF RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E CNEO_3414 sigG; RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E CNEO_3415 sigE; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E CNEO_3422 sigK; RNA polymerase sporulation-specific sigma-27 factor (sigma-K) K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E CNEO_3791 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E CNEO_0760 Putative ECF sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E CNEO_2390 Putative RNA polymerase sigma factor SigI K03093 sigI; RNA polymerase sigma-I factor
E CNEO_1022 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
E CNEO_3806 sigD; RNA polymerase sigma-D factor (sigma-28) K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E CNEO_3321 nusA; Transcription termination/antitermination protein K02600 nusA; transcription termination/antitermination protein NusA
E CNEO_2114 nusB; Transcription termination/antitermination protein K03625 nusB; transcription antitermination protein NusB
E CNEO_0199 nusG; Transcription termination/antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
E CNEO_2571 Putative anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Transcription elongation factors
E CNEO_0159 greA; Transcription elongation factor (Transcript cleavage factor) K03624 greA; transcription elongation factor GreA
E CNEO_1165 greA; Transcription elongation factor K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E CNEO_0535 rho; Transcription termination factor K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024