+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Cobetia sp. 4B

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D H2O77_05190 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E H2O77_04625 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D H2O77_12190 hypothetical protein K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D H2O77_17440 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D H2O77_12680 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D H2O77_12440 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D H2O77_12410 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D H2O77_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D H2O77_01235 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D H2O77_04025 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D H2O77_05595 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D H2O77_12545 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D H2O77_12530 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D H2O77_03265 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D H2O77_06730 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D H2O77_01850 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D H2O77_15245 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D H2O77_15240 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B C Divisome proteins D H2O77_03655 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D H2O77_13445 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D H2O77_16155 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D H2O77_03605 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D H2O77_13945 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D H2O77_03600 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D H2O77_03650 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D H2O77_03630 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D H2O77_16150 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D H2O77_03660 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D H2O77_01855 hypothetical protein K03528 zipA; cell division protein ZipA D H2O77_00135 cell division protein ZapA K09888 zapA; cell division protein ZapA D H2O77_16170 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB D H2O77_03525 cell division protein ZapE K06916 zapE; cell division protein ZapE D H2O77_05575 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D H2O77_04755 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D H2O77_16375 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D H2O77_16370 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D H2O77_16365 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D H2O77_16135 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D H2O77_03360 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D H2O77_03365 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D H2O77_03370 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D H2O77_04145 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D H2O77_17610 ParA family protein K03496 parA; chromosome partitioning protein D H2O77_17605 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D H2O77_05500 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D H2O77_05495 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D H2O77_17620 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D H2O77_17615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D H2O77_00535 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D H2O77_16295 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D H2O77_12000 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D H2O77_00520 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024