+D GENES KO #

  KEGG Orthology (KO) - Cobetia sp. AM6

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cobe00010] D CLAM6_26950 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLAM6_10480 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_26970 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_08170 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CLAM6_33960 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLAM6_01700 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLAM6_08570 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLAM6_26930 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLAM6_33950 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLAM6_00330 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLAM6_31010 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLAM6_08450 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLAM6_25110 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CLAM6_29940 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CLAM6_29930 aceF; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_04300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLAM6_04950 adhA; zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLAM6_19680 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_04940 exaC; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CLAM6_05630 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_29820 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_31890 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CLAM6_26960 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D CLAM6_26140 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:cobe00020] D CLAM6_05120 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CLAM6_31740 acnA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CLAM6_25070 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLAM6_27770 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLAM6_05170 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CLAM6_05180 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_05210 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CLAM6_05200 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CLAM6_23380 CoA-transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CLAM6_05150 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLAM6_05160 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLAM6_05130 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CLAM6_05140 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CLAM6_19250 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CLAM6_24340 fumC1; fumarate hydratase class II 1 K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CLAM6_27130 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CLAM6_08380 acetyl-CoA carboxylase subunit alpha K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D CLAM6_08390 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CLAM6_26140 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLAM6_29940 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CLAM6_29930 aceF; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cobe00030] D CLAM6_10480 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_26970 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_07540 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CLAM6_07550 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CLAM6_03610 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CLAM6_06190 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLAM6_33930 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLAM6_05550 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CLAM6_00230 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CLAM6_16790 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CLAM6_31890 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CLAM6_06470 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLAM6_26940 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D CLAM6_07560 eda_1; 2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CLAM6_18430 choline dehydrogenase K19813 gdh; glucose dehydrogenase [EC:1.1.5.9] D CLAM6_20740 2-ketogluconate kinase K11441 kguK; dehydrogluconokinase [EC:2.7.1.13] D CLAM6_20750 bifunctional glyoxylate/hydroxypyruvate reductase B K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43] D CLAM6_28640 gntV; gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CLAM6_33960 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLAM6_08170 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cobe00040] D CLAM6_20810 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D CLAM6_17000 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_21690 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_23230 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_24560 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_16990 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLAM6_06190 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLAM6_11510 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D CLAM6_20730 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLAM6_21130 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLAM6_22140 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLAM6_22600 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:cobe00051] D CLAM6_26980 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLAM6_31890 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CLAM6_21710 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CLAM6_21760 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CLAM6_21750 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D CLAM6_26380 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D CLAM6_08170 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CLAM6_28740 fruK; phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CLAM6_11490 sorbitol dehydrogenase K08261 E1.1.99.21; D-sorbitol dehydrogenase (acceptor) [EC:1.1.99.21] D CLAM6_13260 mannitol 2-dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D CLAM6_33960 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLAM6_01700 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLAM6_28730 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:cobe00052] D CLAM6_24590 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLAM6_16990 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLAM6_31890 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CLAM6_26950 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLAM6_17740 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D CLAM6_17730 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D CLAM6_08170 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CLAM6_17690 3-oxoacyl-ACP reductase K22215 galD; galactose dehydrogenase [EC:1.1.1.48 1.1.1.120] D CLAM6_17680 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D CLAM6_17700 2-keto-3-deoxy-galactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D CLAM6_17710 eda_2; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] C 00053 Ascorbate and aldarate metabolism [PATH:cobe00053] D CLAM6_17000 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_21690 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_23230 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_24560 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_12230 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_22040 L-rhamnonate dehydratase K25260 lxyD; L-lyxonate dehydratase [EC:4.2.1.176] D CLAM6_20730 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLAM6_21130 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLAM6_22140 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00500 Starch and sucrose metabolism [PATH:cobe00500] D CLAM6_16990 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLAM6_31890 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CLAM6_26950 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLAM6_10480 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_26970 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_26980 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cobe00520] D CLAM6_08520 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CLAM6_26980 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLAM6_34580 glmS_2; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLAM6_23220 glmS_1; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLAM6_01690 glmM_1; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CLAM6_21360 glmM_2; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CLAM6_34600 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CLAM6_02010 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D CLAM6_16960 phosphoglycolate phosphatase, bacterial K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D CLAM6_30580 hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D CLAM6_30590 glgC; mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D CLAM6_07020 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLAM6_08820 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLAM6_21410 nfrC; UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLAM6_21400 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CLAM6_26950 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLAM6_31890 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CLAM6_16990 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLAM6_17000 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_21690 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_23230 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_24560 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_24590 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLAM6_12230 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D CLAM6_10480 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_26970 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_21710 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CLAM6_21760 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CLAM6_21750 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D CLAM6_31380 hypothetical protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:cobe00620] D CLAM6_05630 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_29820 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_29940 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CLAM6_29930 aceF; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_04950 adhA; zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLAM6_04300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLAM6_19680 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLAM6_25650 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_20130 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_08450 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLAM6_31440 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLAM6_08100 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLAM6_08090 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLAM6_10180 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_04940 exaC; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CLAM6_23380 CoA-transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CLAM6_14840 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D CLAM6_21900 poxB; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D CLAM6_33720 lactate dehydrogenase K18930 dld; D-lactate dehydrogenase D CLAM6_02860 gloA_1; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CLAM6_08400 gloA_2; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CLAM6_15670 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CLAM6_28570 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLAM6_14950 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLAM6_31750 maeA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CLAM6_31150 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D CLAM6_30900 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D CLAM6_30890 oadB; putative oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CLAM6_30910 hypothetical protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D CLAM6_08380 acetyl-CoA carboxylase subunit alpha K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D CLAM6_08390 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CLAM6_27130 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CLAM6_19250 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CLAM6_24340 fumC1; fumarate hydratase class II 1 K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CLAM6_09370 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CLAM6_26140 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLAM6_25110 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CLAM6_01020 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_24630 leuA-2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cobe00630] D CLAM6_27870 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D CLAM6_05630 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_29820 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_01020 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D CLAM6_05120 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CLAM6_31740 acnA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CLAM6_25070 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_32370 phbB; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D CLAM6_11580 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D CLAM6_11570 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D CLAM6_11560 glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D CLAM6_05420 katE; catalase K03781 katE; catalase [EC:1.11.1.6] D CLAM6_05430 katB; catalase K03781 katE; catalase [EC:1.11.1.6] D CLAM6_20960 catalase K03781 katE; catalase [EC:1.11.1.6] D CLAM6_28570 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLAM6_14950 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLAM6_16810 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D CLAM6_06220 gph1; phosphoglycolate phosphatase 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CLAM6_08850 hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CLAM6_13870 virP; haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CLAM6_34060 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06660 spuI; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_14370 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_04570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_26440 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_11790 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CLAM6_11820 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_13830 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_14360 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11800 gcvH2; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein D CLAM6_23770 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLAM6_07560 eda_1; 2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CLAM6_04440 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CLAM6_16350 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CLAM6_04430 NADH-quinone oxidoreductase subunit F K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D CLAM6_16340 fdhB; formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CLAM6_16330 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D CLAM6_04620 purU2; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLAM6_14510 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLAM6_23940 purU1; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:cobe00640] D CLAM6_05630 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_29820 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_15760 acyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D CLAM6_25650 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_20130 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_16700 bkdA1; 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D CLAM6_16710 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D CLAM6_16720 bkdB; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_30670 quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_31440 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLAM6_08100 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLAM6_08090 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLAM6_10180 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLAM6_18640 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CLAM6_14290 beta alanine--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D CLAM6_05200 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CLAM6_05210 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CLAM6_14280 mmsA1; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_21040 mmsA_1; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_25200 mmsA_2; methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_05760 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D CLAM6_05790 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D CLAM6_05770 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D CLAM6_05780 putative methylaconitate Delta-isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D CLAM6_25070 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLAM6_05750 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D CLAM6_08440 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D CLAM6_13080 aldehyde reductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D CLAM6_24890 NADH-dependent alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:cobe00650] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_29160 fabV; enoyl-[acyl-carrier-protein] reductase [NADH] K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D CLAM6_20110 phbC; poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D CLAM6_32370 phbB; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D CLAM6_30890 oadB; putative oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CLAM6_05150 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLAM6_05160 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLAM6_05130 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CLAM6_05140 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CLAM6_18640 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CLAM6_08010 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_18630 gabD_1; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_19600 gabD_2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_23380 CoA-transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CLAM6_25400 liuE; 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methyl glutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D CLAM6_11850 dhcA; dehydrocarnitine CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CLAM6_11840 dhcB; dehydrocarnitine CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CLAM6_19500 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D CLAM6_18820 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_18970 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_32680 ilvI; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_32670 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLAM6_12660 short-chain dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:cobe00660] D CLAM6_18820 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_18970 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_32680 ilvI; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_32670 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLAM6_05200 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CLAM6_05210 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CLAM6_10110 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CLAM6_10120 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CLAM6_10130 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cobe00562] D CLAM6_15810 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CLAM6_29370 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CLAM6_14280 mmsA1; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_21040 mmsA_1; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_25200 mmsA_2; methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_01700 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cobe00190] D CLAM6_06210 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CLAM6_05150 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLAM6_05160 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLAM6_05130 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CLAM6_05140 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CLAM6_07120 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CLAM6_07130 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D CLAM6_07140 cytochrome c K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D CLAM6_04520 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CLAM6_04510 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D CLAM6_09600 coIII; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D CLAM6_09580 coxA; cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CLAM6_09570 coxB; cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D CLAM6_09590 ctaG; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D CLAM6_09640 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CLAM6_03150 cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D CLAM6_03140 ccoO1; cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D CLAM6_04500 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D CLAM6_04490 cyoB; cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D CLAM6_04480 cyoA-2; ubiquinol oxidase subunit 2 K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D CLAM6_11100 cytochrome bd oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLAM6_20000 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLAM6_22530 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLAM6_11110 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLAM6_19990 ubiquinol oxidase subunit II, cyanide insensitive K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLAM6_22540 cioB; cyanide insensitive terminal oxidase K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLAM6_34640 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CLAM6_20090 hypothetical protein K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CLAM6_34620 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CLAM6_20020 atpD2; ATP synthase subunit beta 2 K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CLAM6_34630 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CLAM6_20100 hypothetical protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CLAM6_34650 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CLAM6_34610 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CLAM6_20030 atpC2; ATP synthase epsilon chain 2 K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CLAM6_34680 atpB_2; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLAM6_20060 atpB_1; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLAM6_34660 atpF_2; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CLAM6_20080 atpF_1; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CLAM6_34670 atpE_2; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CLAM6_20070 atpE_1; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CLAM6_08140 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CLAM6_31320 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CLAM6_26480 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:cobe00710] D CLAM6_33950 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLAM6_08570 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLAM6_26930 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLAM6_33960 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLAM6_33930 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLAM6_00230 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CLAM6_03490 prkB; phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D CLAM6_01700 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLAM6_06190 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLAM6_05550 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CLAM6_09370 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CLAM6_26140 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLAM6_31150 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] C 00720 Other carbon fixation pathways [PATH:cobe00720] D CLAM6_25110 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CLAM6_09370 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CLAM6_08380 acetyl-CoA carboxylase subunit alpha K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D CLAM6_08390 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CLAM6_19250 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CLAM6_24340 fumC1; fumarate hydratase class II 1 K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CLAM6_05150 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLAM6_05160 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLAM6_05130 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CLAM6_05140 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CLAM6_05210 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CLAM6_05200 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_27770 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLAM6_31740 acnA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CLAM6_25070 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLAM6_31440 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLAM6_08100 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLAM6_08090 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLAM6_10180 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLAM6_14500 folD2; bifunctional protein FolD 2 K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CLAM6_24980 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CLAM6_33830 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CLAM6_22630 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CLAM6_25650 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_20130 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_05630 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_29820 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:cobe00680] D CLAM6_24690 fdh; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D CLAM6_04300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLAM6_04310 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D CLAM6_04440 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CLAM6_16350 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CLAM6_04430 NADH-quinone oxidoreductase subunit F K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D CLAM6_16340 fdhB; formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CLAM6_16330 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D CLAM6_04570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_26440 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_16810 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D CLAM6_31010 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLAM6_09370 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CLAM6_33960 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLAM6_08170 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CLAM6_13790 potassium transporter K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D CLAM6_13880 potassium transporter K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D CLAM6_14380 glutamine amidotransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D CLAM6_14390 protein glxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D CLAM6_14400 FMN-binding glutamate synthase family protein K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D CLAM6_25650 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_20130 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_05630 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_29820 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_25110 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CLAM6_00330 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLAM6_00450 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLAM6_27290 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CLAM6_10520 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:cobe00910] D CLAM6_04200 crnA; MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CLAM6_30290 narB; nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D CLAM6_30300 hypothetical protein K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D CLAM6_30310 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D CLAM6_30320 nirD; nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D CLAM6_21910 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CLAM6_28500 gdhB; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D CLAM6_34060 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06660 spuI; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_14370 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_31050 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLAM6_31040 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLAM6_17170 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D CLAM6_16290 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cobe00920] D CLAM6_21490 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D CLAM6_10430 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CLAM6_10420 cysD_1; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLAM6_21500 cysD_2; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLAM6_21510 cysQ_1; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CLAM6_24580 cysQ_2; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CLAM6_05700 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CLAM6_17570 cysI; sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D CLAM6_19000 hypothetical protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D CLAM6_09040 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLAM6_10590 hypothetical protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLAM6_30510 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D CLAM6_29390 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CLAM6_05480 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLAM6_28590 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLAM6_01950 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CLAM6_10230 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D CLAM6_05650 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D CLAM6_07860 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cobe00061] D CLAM6_31440 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLAM6_08100 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLAM6_08090 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLAM6_10180 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLAM6_08930 acpP1; acyl carrier protein 1 K02078 acpP; acyl carrier protein D CLAM6_27380 hypothetical protein K02078 acpP; acyl carrier protein D CLAM6_27390 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D CLAM6_08910 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLAM6_30730 fabY; beta-ketoacyl-[acyl-carrier-protein] synthase FabY K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D CLAM6_27500 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLAM6_33200 fabB; beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLAM6_08940 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLAM6_27530 fabF_2; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLAM6_08410 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_08920 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_20720 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_27190 speA_2; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_27520 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_33190 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D CLAM6_31490 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLAM6_20120 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CLAM6_29160 fabV; enoyl-[acyl-carrier-protein] reductase [NADH] K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D CLAM6_05490 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_16680 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cobe00071] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_06010 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_06350 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D CLAM6_05490 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_16680 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_34370 rubB; pyridine nucleotide-disulfide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D CLAM6_04300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLAM6_04950 adhA; zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cobe00561] D CLAM6_23770 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_19680 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLAM6_24300 glpK1; glycerol kinase 1 K00864 glpK; glycerol kinase [EC:2.7.1.30] D CLAM6_29860 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CLAM6_08900 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CLAM6_30490 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CLAM6_33210 lptA; lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLAM6_30650 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CLAM6_17730 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:cobe00564] D CLAM6_09940 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CLAM6_24330 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CLAM6_29860 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CLAM6_30490 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CLAM6_33210 lptA; lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLAM6_22170 tagD2; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D CLAM6_30650 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CLAM6_28170 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D CLAM6_05230 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CLAM6_06290 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CLAM6_23000 eutB_1; ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D CLAM6_22990 eutC; ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D CLAM6_29970 SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D CLAM6_31560 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CLAM6_32640 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CLAM6_10580 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CLAM6_25820 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CLAM6_26270 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D CLAM6_19240 clsA; cardiolipin synthase A K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:cobe00565] D CLAM6_28170 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:cobe00600] D CLAM6_17730 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism D CLAM6_28170 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D CLAM6_28170 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:cobe00592] D CLAM6_28170 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D CLAM6_06010 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:cobe01040] D CLAM6_26470 tesA; arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CLAM6_30250 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CLAM6_34480 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cobe00230] D CLAM6_10390 aspP; adenosine diphosphate sugar pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CLAM6_26180 ADP-ribose diphosphatase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D CLAM6_31890 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CLAM6_06470 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLAM6_10220 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CLAM6_03470 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CLAM6_23550 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CLAM6_30210 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CLAM6_23540 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CLAM6_03020 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CLAM6_03030 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CLAM6_30050 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CLAM6_27820 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CLAM6_08050 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLAM6_24200 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CLAM6_16050 nutA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLAM6_26660 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLAM6_26170 haloacid dehalogenase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D CLAM6_25130 UPF0345 protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D CLAM6_32700 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CLAM6_08540 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CLAM6_04030 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CLAM6_29430 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLAM6_34920 rdgB; non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CLAM6_24190 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D CLAM6_16120 xdhA; xanthine dehydrogenase K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D CLAM6_16110 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D CLAM6_04040 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CLAM6_16090 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D CLAM6_34260 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CLAM6_03630 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLAM6_03620 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLAM6_34020 dgt2; deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D CLAM6_34280 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CLAM6_31420 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CLAM6_09350 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D CLAM6_10740 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CLAM6_23410 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D CLAM6_11290 adenine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D CLAM6_15100 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLAM6_29910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CLAM6_09360 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CLAM6_10410 cpdA_1; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D CLAM6_13860 cpdA_2; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D CLAM6_30520 apaH; bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D CLAM6_21490 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D CLAM6_10430 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CLAM6_10420 cysD_1; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLAM6_21500 cysD_2; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLAM6_15850 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D CLAM6_15840 uricase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D CLAM6_33890 Asp/Glu racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D CLAM6_16230 allantoinase K16842 hpxB; allantoinase [EC:3.5.2.5] D CLAM6_15830 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D CLAM6_15820 aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D CLAM6_22370 ureC2; urease subunit alpha 2 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CLAM6_22380 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CLAM6_22390 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D CLAM6_15970 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:cobe00240] D CLAM6_01620 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLAM6_01610 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLAM6_00420 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CLAM6_00430 pyrC'; dihydroorotase-like protein K01465 URA4; dihydroorotase [EC:3.5.2.3] D CLAM6_17330 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CLAM6_28480 pyrD; dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CLAM6_34150 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CLAM6_07740 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CLAM6_31590 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CLAM6_29430 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLAM6_09360 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CLAM6_06780 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CLAM6_33910 ygjP; metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D CLAM6_31030 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CLAM6_27260 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CLAM6_16050 nutA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLAM6_26660 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLAM6_25130 UPF0345 protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D CLAM6_24130 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CLAM6_00410 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CLAM6_15100 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLAM6_18690 rihA; pyrimidine-specific ribonucleoside hydrolase RihA K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D CLAM6_23410 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D CLAM6_09710 cdd; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CLAM6_23570 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CLAM6_03630 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLAM6_03620 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLAM6_08970 hypothetical protein K00943 tmk; dTMP kinase [EC:2.7.4.9] D CLAM6_31870 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CLAM6_27050 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CLAM6_04250 oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CLAM6_04240 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CLAM6_04260 dht; D-hydantoinase/dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CLAM6_04270 apolipoprotein acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D CLAM6_14200 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CLAM6_14790 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CLAM6_18830 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cobe00250] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLAM6_24360 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CLAM6_12350 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D CLAM6_15070 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CLAM6_09380 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLAM6_15960 ansZ; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLAM6_12310 nitrilase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3] D CLAM6_28330 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CLAM6_31780 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CLAM6_16750 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CLAM6_25730 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLAM6_01390 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLAM6_10740 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CLAM6_27820 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CLAM6_00420 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CLAM6_18640 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CLAM6_08010 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_18630 gabD_1; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_19600 gabD_2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_31050 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLAM6_31040 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLAM6_28500 gdhB; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D CLAM6_11200 bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CLAM6_34060 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06660 spuI; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_14370 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_01620 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLAM6_01610 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLAM6_08020 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CLAM6_34580 glmS_2; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLAM6_23220 glmS_1; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLAM6_10220 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cobe00260] D CLAM6_30940 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLAM6_10140 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLAM6_32170 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CLAM6_02310 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D CLAM6_32160 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CLAM6_03190 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D CLAM6_04570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_26440 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_16810 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D CLAM6_28570 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLAM6_14950 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLAM6_23770 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLAM6_00330 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLAM6_00450 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLAM6_27290 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CLAM6_10520 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CLAM6_20410 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CLAM6_20420 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D CLAM6_18600 flavin monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLAM6_11790 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CLAM6_11820 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_13830 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_14360 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11800 gcvH2; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein D CLAM6_32640 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CLAM6_06360 betA; oxygen-dependent choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D CLAM6_06370 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D CLAM6_18980 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D CLAM6_04530 (2Fe-2S)-binding protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D CLAM6_04540 gbcB; hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D CLAM6_04360 dgcA; dimethylglycine catabolism protein DgcA K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D CLAM6_04370 dgcB; dimethylglycine catabolism protein DgcB K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit D CLAM6_04380 electron transfer flavoprotein subunit alpha K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha D CLAM6_04390 hypothetical protein K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D CLAM6_04600 soxA; sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D CLAM6_14470 aminomethyltransferase K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D CLAM6_04580 soxB; sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D CLAM6_14490 soxB-2; sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D CLAM6_04610 soxG; sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D CLAM6_14460 soxG-2; sarcosine oxidase K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D CLAM6_04590 soxD; sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D CLAM6_14480 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D CLAM6_30380 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLAM6_00240 ilvA1; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLAM6_27630 eutB_2; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLAM6_11610 dsdA; putative D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D CLAM6_10310 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CLAM6_10300 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CLAM6_17480 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D CLAM6_17490 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D CLAM6_17470 ectC; L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D CLAM6_02280 ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55] D CLAM6_04690 pyridoxal-dependent decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] D CLAM6_28560 ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D CLAM6_28550 N-alpha-acetyl diaminobutyric acid deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D CLAM6_27640 aspartate aminotransferase family protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D CLAM6_27650 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:cobe00270] D CLAM6_29390 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CLAM6_05480 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLAM6_28590 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLAM6_32400 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLAM6_18670 ybgG; homocysteine S-methyltransferase YbgG K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D CLAM6_17520 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLAM6_12620 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CLAM6_33920 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CLAM6_30610 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CLAM6_00550 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D CLAM6_24990 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CLAM6_19230 mtnK; methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D CLAM6_32700 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CLAM6_08550 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D CLAM6_16980 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D CLAM6_30020 mtnB; methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D CLAM6_30000 mtnC; enolase-phosphatase E1 K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D CLAM6_30010 mtnD; acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D CLAM6_24260 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D CLAM6_00060 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CLAM6_03180 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D CLAM6_30940 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLAM6_10140 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLAM6_32170 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CLAM6_01950 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CLAM6_18770 metY; O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CLAM6_10230 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D CLAM6_02930 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLAM6_27160 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CLAM6_00370 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLAM6_09040 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLAM6_10590 hypothetical protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLAM6_15010 1-aminocyclopropane-1-carboxylate deaminase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25] D CLAM6_30380 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLAM6_09330 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D CLAM6_00450 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLAM6_27290 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:cobe00280] D CLAM6_02930 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLAM6_16700 bkdA1; 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D CLAM6_16710 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D CLAM6_16720 bkdB; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_25360 acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_06010 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLAM6_20600 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CLAM6_25160 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CLAM6_14280 mmsA1; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_21040 mmsA_1; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_25200 mmsA_2; methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_14290 beta alanine--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D CLAM6_18640 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CLAM6_25390 liuD; methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D CLAM6_25370 liuB; methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D CLAM6_25380 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D CLAM6_25400 liuE; 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methyl glutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D CLAM6_11850 dhcA; dehydrocarnitine CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CLAM6_11840 dhcB; dehydrocarnitine CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cobe00290] D CLAM6_00240 ilvA1; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLAM6_27630 eutB_2; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLAM6_10110 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CLAM6_10120 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CLAM6_10130 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CLAM6_18820 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_18970 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_32680 ilvI; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_32670 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLAM6_32650 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CLAM6_26230 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CLAM6_02930 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLAM6_28330 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CLAM6_24630 leuA-2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cobe00300] D CLAM6_32170 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CLAM6_30940 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLAM6_10140 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLAM6_30080 dapA_2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLAM6_01600 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CLAM6_31660 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CLAM6_31640 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CLAM6_31670 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CLAM6_01360 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CLAM6_01370 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CLAM6_07250 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLAM6_07260 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cobe00310] D CLAM6_05180 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_18640 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CLAM6_08010 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_18630 gabD_1; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_19600 gabD_2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_07810 membrane protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D CLAM6_13330 lhpD_1; delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D CLAM6_21120 lhpD_2; delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_13450 gamma-butyrobetaine hydroxylase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] D CLAM6_28910 gamma-butyrobetaine hydroxylase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] D CLAM6_02410 gamma-butyrobetaine hydroxylase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] D CLAM6_15520 gamma-butyrobetaine hydroxylase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] D CLAM6_22750 hypothetical protein K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] C 00220 Arginine biosynthesis [PATH:cobe00220] D CLAM6_25760 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CLAM6_25730 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLAM6_01390 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLAM6_13640 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D CLAM6_13630 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D CLAM6_22370 ureC2; urease subunit alpha 2 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CLAM6_22380 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CLAM6_22390 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D CLAM6_08020 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CLAM6_34060 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06660 spuI; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_14370 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_01620 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLAM6_01610 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLAM6_28500 gdhB; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLAM6_28330 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CLAM6_03980 argA; amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D CLAM6_07400 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CLAM6_30850 N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D CLAM6_31900 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CLAM6_34780 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CLAM6_24680 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D CLAM6_28410 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:cobe00330] D CLAM6_09710 cdd; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CLAM6_02300 speA_1; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D CLAM6_08700 aguA_1; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D CLAM6_14170 aguA_2; putative agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D CLAM6_08690 aguB; apolipoprotein acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D CLAM6_00550 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D CLAM6_30610 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CLAM6_06680 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_06690 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D CLAM6_14210 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D CLAM6_18600 flavin monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLAM6_14980 aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D CLAM6_18950 gbuA; guanidinobutyrase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D CLAM6_16220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CLAM6_29120 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D CLAM6_29130 arginine N-succinyltransferase subunit alpha K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D CLAM6_29100 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D CLAM6_29140 aruC; succinylornithine transaminase/acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D CLAM6_29110 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D CLAM6_28950 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D CLAM6_06570 FAD-dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D CLAM6_06640 hypothetical protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D CLAM6_18840 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D CLAM6_01970 proC_1; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CLAM6_07820 proC_2; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CLAM6_11200 bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CLAM6_32970 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CLAM6_08250 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:cobe00340] D CLAM6_07030 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CLAM6_10730 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D CLAM6_31260 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CLAM6_17290 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CLAM6_02170 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D CLAM6_02180 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CLAM6_02160 hisF1; imidazole glycerol phosphate synthase subunit hisF1 K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CLAM6_02190 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CLAM6_02050 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_13720 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_00990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_07040 hisD_1; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CLAM6_27440 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_18600 flavin monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:cobe00350] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLAM6_02050 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_13720 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_00990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_24650 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D CLAM6_19450 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D CLAM6_19430 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D CLAM6_19440 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D CLAM6_18600 flavin monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLAM6_04300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLAM6_04950 adhA; zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLAM6_10540 hypothetical protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D CLAM6_08010 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_18630 gabD_1; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_19600 gabD_2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_22870 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00360 Phenylalanine metabolism [PATH:cobe00360] D CLAM6_24740 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D CLAM6_18600 flavin monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLAM6_02050 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_13720 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_00990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_22870 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CLAM6_24650 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D CLAM6_06420 dadA2; D-amino acid dehydrogenase 2 K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D CLAM6_24800 dadA; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D CLAM6_16220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:cobe00380] D CLAM6_05180 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_18600 flavin monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_16220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CLAM6_05420 katE; catalase K03781 katE; catalase [EC:1.11.1.6] D CLAM6_05430 katB; catalase K03781 katE; catalase [EC:1.11.1.6] D CLAM6_20960 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cobe00400] D CLAM6_09190 aroF-1; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLAM6_31340 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLAM6_31060 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CLAM6_08110 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CLAM6_29580 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CLAM6_31070 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CLAM6_27270 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D CLAM6_10060 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CLAM6_06230 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CLAM6_06240 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CLAM6_06250 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CLAM6_10170 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D CLAM6_06260 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CLAM6_10310 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CLAM6_10300 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CLAM6_27280 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D CLAM6_10030 pheC; cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLAM6_02050 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_13720 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_00990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_24740 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cobe00410] D CLAM6_01800 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CLAM6_18640 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_01810 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CLAM6_04250 oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CLAM6_04240 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CLAM6_04260 dht; D-hydantoinase/dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CLAM6_04270 apolipoprotein acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D CLAM6_14200 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CLAM6_14790 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CLAM6_18830 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CLAM6_14290 beta alanine--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_14280 mmsA1; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_21040 mmsA_1; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLAM6_25200 mmsA_2; methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:cobe00430] D CLAM6_06180 ggtA; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLAM6_31780 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CLAM6_28500 gdhB; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D CLAM6_22000 transcriptional regulator K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D CLAM6_25570 transcriptional regulator K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D CLAM6_21990 FAD-dependent oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-] D CLAM6_25560 tauD; FAD-dependent oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-] D CLAM6_25660 sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D CLAM6_25650 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLAM6_20130 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] C 00440 Phosphonate and phosphinate metabolism [PATH:cobe00440] D CLAM6_13240 phnX; phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D CLAM6_13230 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00450 Selenocompound metabolism [PATH:cobe00450] D CLAM6_32400 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLAM6_17520 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLAM6_12620 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CLAM6_10790 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CLAM6_31710 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CLAM6_21490 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D CLAM6_10430 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CLAM6_10420 cysD_1; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLAM6_21500 cysD_2; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLAM6_16270 hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CLAM6_23630 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cobe00460] D CLAM6_06180 ggtA; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLAM6_09380 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLAM6_15960 ansZ; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLAM6_04570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_26440 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cobe00470] D CLAM6_26600 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D CLAM6_07320 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLAM6_08020 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CLAM6_28520 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3] D CLAM6_07280 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLAM6_12350 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D CLAM6_15070 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CLAM6_11610 dsdA; putative D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D CLAM6_01360 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CLAM6_01370 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CLAM6_21100 4-hydroxyproline 2-epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D CLAM6_21200 amino acid dehydrogenase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-] D CLAM6_21110 dapA_1; dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D CLAM6_20730 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLAM6_21130 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLAM6_22140 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLAM6_06420 dadA2; D-amino acid dehydrogenase 2 K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D CLAM6_24800 dadA; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:cobe00480] D CLAM6_06180 ggtA; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLAM6_25270 UPF0271 protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CLAM6_25250 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D CLAM6_27160 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CLAM6_00370 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CLAM6_02940 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CLAM6_23750 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CLAM6_02570 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CLAM6_13090 gst3; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_20560 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_25710 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_30840 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_00490 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_17180 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D CLAM6_27770 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLAM6_20750 bifunctional glyoxylate/hydroxypyruvate reductase B K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43] D CLAM6_03610 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CLAM6_07540 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CLAM6_11640 glutathione amide-dependent peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D CLAM6_00550 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:cobe00540] D CLAM6_31480 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CLAM6_07360 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CLAM6_31510 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CLAM6_25030 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CLAM6_31470 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CLAM6_08780 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CLAM6_06940 kdsD; arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CLAM6_31020 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CLAM6_06930 hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CLAM6_08800 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CLAM6_00180 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CLAM6_26590 htrB_1; lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CLAM6_26770 htrB_2; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CLAM6_27890 membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D CLAM6_02880 membrane protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D CLAM6_00150 kdkA; 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D CLAM6_07180 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CLAM6_00170 hldE; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D CLAM6_00070 gmhB; D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CLAM6_00100 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CLAM6_00110 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CLAM6_24550 hypothetical protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D CLAM6_21680 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cobe00541] D CLAM6_16990 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLAM6_24590 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLAM6_17000 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_21690 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_23230 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_24560 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLAM6_12230 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D CLAM6_21240 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLAM6_21320 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLAM6_21250 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLAM6_21310 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLAM6_21330 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CLAM6_33220 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CLAM6_31380 hypothetical protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D CLAM6_21710 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CLAM6_21760 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CLAM6_21750 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D CLAM6_34600 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CLAM6_21410 nfrC; UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLAM6_21400 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:cobe00550] D CLAM6_07020 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLAM6_08820 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLAM6_07310 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CLAM6_07280 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLAM6_07250 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLAM6_07320 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLAM6_07260 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CLAM6_31570 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLAM6_29880 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLAM6_11880 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLAM6_07270 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLAM6_07300 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CLAM6_04330 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CLAM6_31130 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLAM6_08290 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLAM6_07240 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLAM6_08330 dacC; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLAM6_30680 dacB; peptidase M15 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:cobe00552] D CLAM6_29880 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLAM6_11880 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cobe00543] D CLAM6_29390 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cobe00730] D CLAM6_26820 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CLAM6_34810 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CLAM6_01190 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CLAM6_29410 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLAM6_25590 putative D-amino acid oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D CLAM6_32750 putative D-amino acid oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D CLAM6_00480 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CLAM6_01060 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CLAM6_22960 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CLAM6_22970 thiE; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CLAM6_26280 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CLAM6_10610 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CLAM6_23610 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CLAM6_29910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CLAM6_26810 aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:cobe00740] D CLAM6_00520 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CLAM6_26310 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CLAM6_26320 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CLAM6_01330 hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D CLAM6_26300 ribH1; 6,7-dimethyl-8-ribityllumazine synthase 1 K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CLAM6_24220 ribE-1; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CLAM6_32940 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CLAM6_22960 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CLAM6_10390 aspP; adenosine diphosphate sugar pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CLAM6_08190 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:cobe00750] D CLAM6_16510 pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D CLAM6_33940 D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D CLAM6_28430 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D CLAM6_27290 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CLAM6_22030 pdxA2; 4-hydroxythreonine-4-phosphate dehydrogenase 2 K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D CLAM6_30550 pdxA1; 4-hydroxythreonine-4-phosphate dehydrogenase 1 K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D CLAM6_09300 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D CLAM6_32160 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:cobe00760] D CLAM6_24360 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CLAM6_30130 nadA; quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CLAM6_29960 nadC; nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CLAM6_26890 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CLAM6_16050 nutA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLAM6_26660 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLAM6_16770 ADP-ribose pyrophosphatase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D CLAM6_08260 hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CLAM6_09360 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CLAM6_15720 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CLAM6_32730 nadE; NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CLAM6_30980 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CLAM6_29710 npdA; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CLAM6_23860 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CLAM6_08660 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D CLAM6_09910 pntAa; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D CLAM6_09920 NAD(P)(+) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D CLAM6_09930 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D CLAM6_08010 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_18630 gabD_1; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLAM6_19600 gabD_2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:cobe00770] D CLAM6_18820 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_18970 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_32680 ilvI; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLAM6_32670 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLAM6_32650 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CLAM6_26230 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CLAM6_01820 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CLAM6_07570 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CLAM6_01810 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CLAM6_33670 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D CLAM6_31860 coaBC; phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CLAM6_09360 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CLAM6_30740 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CLAM6_07430 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CLAM6_09310 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CLAM6_02930 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLAM6_04250 oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CLAM6_04240 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CLAM6_04260 dht; D-hydantoinase/dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CLAM6_04270 apolipoprotein acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D CLAM6_14200 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CLAM6_14790 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CLAM6_18830 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CLAM6_01800 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:cobe00780] D CLAM6_07920 bioC; malonyl-[acyl-carrier protein] O-methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D CLAM6_27500 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLAM6_33200 fabB; beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLAM6_08940 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLAM6_27530 fabF_2; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLAM6_08410 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_08920 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_20720 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_27190 speA_2; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_27520 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_31490 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLAM6_20120 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CLAM6_07930 hypothetical protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D CLAM6_07940 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CLAM6_21590 wcbT; polyketide synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CLAM6_23900 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CLAM6_07910 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CLAM6_07950 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CLAM6_33680 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cobe00785] D CLAM6_08350 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CLAM6_08360 lipA_1; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_29940 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CLAM6_29930 aceF; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CLAM6_05170 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CLAM6_05180 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CLAM6_16700 bkdA1; 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D CLAM6_16710 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D CLAM6_16720 bkdB; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D CLAM6_11790 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CLAM6_11820 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_13830 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_14360 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_11800 gcvH2; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cobe00790] D CLAM6_07980 folE1; GTP cyclohydrolase 1 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CLAM6_22270 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D CLAM6_23610 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CLAM6_05390 eddA; extracelullar DNA degradation protein EddA K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CLAM6_30480 folB-1; 7,8-dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CLAM6_01830 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CLAM6_30470 folK-2; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CLAM6_01680 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CLAM6_27040 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CLAM6_10190 folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CLAM6_00520 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CLAM6_26310 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CLAM6_05710 aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D CLAM6_08950 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CLAM6_07990 folX; dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D CLAM6_31370 folM; short-chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D CLAM6_24750 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D CLAM6_24740 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D CLAM6_24850 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CLAM6_24840 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CLAM6_28280 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CLAM6_14860 hypothetical protein K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33] D CLAM6_23970 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CLAM6_23990 hypothetical protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CLAM6_23980 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CLAM6_16310 moaB2; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D CLAM6_16300 moeA; molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CLAM6_24000 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CLAM6_29040 molybdopterin-guanine dinucleotide biosynthesis protein A K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D CLAM6_24020 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:cobe00670] D CLAM6_27040 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CLAM6_31370 folM; short-chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D CLAM6_14500 folD2; bifunctional protein FolD 2 K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CLAM6_24980 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CLAM6_04570 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_26440 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLAM6_23550 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CLAM6_08050 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLAM6_29650 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CLAM6_11820 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_13830 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_14360 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLAM6_17520 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLAM6_27050 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CLAM6_04620 purU2; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLAM6_14510 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLAM6_23940 purU1; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLAM6_33830 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CLAM6_22630 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CLAM6_00250 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cobe00860] D CLAM6_05100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLAM6_06520 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CLAM6_34820 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CLAM6_31310 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CLAM6_01400 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CLAM6_01410 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CLAM6_00530 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CLAM6_29590 hemF; oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D CLAM6_34800 TIGR00701 family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D CLAM6_03370 hemH1; ferrochelatase 1 K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CLAM6_01420 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CLAM6_07850 hypothetical protein K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D CLAM6_30280 hypothetical protein K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CLAM6_04520 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CLAM6_09640 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CLAM6_33090 hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CLAM6_25600 cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D CLAM6_25610 hypothetical protein K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D CLAM6_07770 cob(I)alamin adenosyltransferase/cobinamide ATP-dependent adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CLAM6_03010 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cobe00130] D CLAM6_34380 ubiC; putative chorismate pyruvate-lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D CLAM6_34390 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CLAM6_31390 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D CLAM6_08190 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CLAM6_00300 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D CLAM6_16970 ubiG; ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D CLAM6_00290 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D CLAM6_31230 ubiE; ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CLAM6_03520 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D CLAM6_16570 wrbA; NAD(P)H quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D CLAM6_24650 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cobe00900] D CLAM6_00480 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CLAM6_31550 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CLAM6_26690 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CLAM6_06480 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CLAM6_26680 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CLAM6_29470 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CLAM6_32900 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_08190 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CLAM6_00470 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CLAM6_33010 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CLAM6_31570 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:cobe00903] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_24270 hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:cobe00907] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_25400 liuE; 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methyl glutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D CLAM6_06010 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CLAM6_33930 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cobe00523] D CLAM6_21240 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLAM6_21320 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLAM6_21250 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLAM6_21310 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLAM6_21330 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CLAM6_33220 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:cobe01054] D CLAM6_12350 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D CLAM6_15070 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D CLAM6_21250 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D CLAM6_14920 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:cobe00332] D CLAM6_32970 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CLAM6_08250 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cobe00261] D CLAM6_21490 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D CLAM6_10430 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CLAM6_10420 cysD_1; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLAM6_21500 cysD_2; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLAM6_30940 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLAM6_10140 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLAM6_30080 dapA_2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLAM6_01600 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cobe00521] D CLAM6_26950 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLAM6_31890 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CLAM6_15810 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CLAM6_29370 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CLAM6_21240 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLAM6_21320 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLAM6_21250 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLAM6_21310 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLAM6_21330 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CLAM6_33220 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CLAM6_26950 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cobe00525] D CLAM6_21240 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLAM6_21320 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLAM6_21250 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cobe00401] D CLAM6_27270 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLAM6_02050 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_13720 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_00990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CLAM6_06230 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CLAM6_06240 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D CLAM6_08910 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLAM6_08410 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_08920 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_20720 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_27190 speA_2; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_27520 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_20120 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CLAM6_08930 acpP1; acyl carrier protein 1 K02078 acpP; acyl carrier protein D CLAM6_27380 hypothetical protein K02078 acpP; acyl carrier protein D CLAM6_27390 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:cobe00999] D CLAM6_33920 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CLAM6_29580 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cobe00362] D CLAM6_06010 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLAM6_00440 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D CLAM6_23030 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLAM6_30890 oadB; putative oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:cobe00627] D CLAM6_16220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CLAM6_08190 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:cobe00364] D CLAM6_22940 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:cobe00625] D CLAM6_04950 adhA; zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLAM6_04300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLAM6_20610 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLAM6_24690 fdh; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D CLAM6_22830 dehII; haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D CLAM6_11010 chd1; haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cobe00361] D CLAM6_22940 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CLAM6_22830 dehII; haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D CLAM6_11010 chd1; haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:cobe00623] D CLAM6_22870 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CLAM6_15430 aldehyde dehydrogenase K20199 pchA; 4-hydroxybenzaldehyde dehydrogenase (NADP+) [EC:1.2.1.96] D CLAM6_22940 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:cobe00622] D CLAM6_22870 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CLAM6_00440 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:cobe00633] D CLAM6_16080 oxygen-insensitive NAD(P)H-dependent nitroreductase NfsB K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D CLAM6_02060 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D CLAM6_13060 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D CLAM6_06010 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:cobe00643] D CLAM6_19450 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D CLAM6_19430 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D CLAM6_19440 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D CLAM6_16220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation [PATH:cobe00791] D CLAM6_13630 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D CLAM6_13640 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D CLAM6_22370 ureC2; urease subunit alpha 2 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CLAM6_22380 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CLAM6_22390 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:cobe00930] D CLAM6_24270 hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D CLAM6_06000 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] C 00363 Bisphenol degradation C 00621 Dioxin degradation D CLAM6_00440 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:cobe00626] D CLAM6_04950 adhA; zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLAM6_04300 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation D CLAM6_18700 hypothetical protein K03333 choD; cholesterol oxidase [EC:1.1.3.6] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cobe03020] D CLAM6_33600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLAM6_33590 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLAM6_33280 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLAM6_34270 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D CLAM6_16240 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cobe03010] D CLAM6_27250 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CLAM6_31610 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CLAM6_33470 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CLAM6_33300 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CLAM6_33360 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CLAM6_03270 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CLAM6_33570 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CLAM6_33390 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CLAM6_07110 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CLAM6_33540 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CLAM6_33310 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CLAM6_33580 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CLAM6_33320 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CLAM6_33400 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CLAM6_01770 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CLAM6_32230 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CLAM6_33440 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CLAM6_03280 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CLAM6_33490 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CLAM6_32960 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CLAM6_30440 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CLAM6_33630 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CLAM6_33500 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CLAM6_33530 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CLAM6_33520 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CLAM6_33410 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CLAM6_33380 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CLAM6_33610 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CLAM6_03300 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CLAM6_33620 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CLAM6_33640 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CLAM6_07100 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CLAM6_33430 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CLAM6_33340 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CLAM6_33460 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CLAM6_33270 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CLAM6_33370 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CLAM6_32200 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CLAM6_24480 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CLAM6_33000 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CLAM6_33480 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CLAM6_33510 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CLAM6_33420 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CLAM6_06460 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CLAM6_32990 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CLAM6_31840 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CLAM6_33450 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CLAM6_33350 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CLAM6_31160 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CLAM6_08890 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CLAM6_31830 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CLAM6_24490 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 C 00970 Aminoacyl-tRNA biosynthesis [PATH:cobe00970] D CLAM6_t00220 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLAM6_t00190 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLAM6_t00620 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLAM6_t00460 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CLAM6_t00450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLAM6_t00210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLAM6_t00140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLAM6_t00590 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLAM6_t00640 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLAM6_t00710 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CLAM6_05100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLAM6_06720 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLAM6_13510 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLAM6_14020 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLAM6_14660 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLAM6_06710 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CLAM6_06730 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CLAM6_25010 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CLAM6_30950 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLAM6_16840 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLAM6_00090 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CLAM6_00080 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CLAM6_24510 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLAM6_07840 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLAM6_25000 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLAM6_23630 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLAM6_29650 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CLAM6_02900 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLAM6_06050 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLAM6_32930 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLAM6_32030 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLAM6_31180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLAM6_26120 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLAM6_29480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLAM6_24470 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLAM6_24460 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLAM6_02020 tyrS2; tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLAM6_30170 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLAM6_31770 hypothetical protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLAM6_t00320 tRNA-Gly C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cobe03060] D CLAM6_33330 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CLAM6_33660 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CLAM6_01710 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CLAM6_29350 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CLAM6_29360 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CLAM6_29340 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CLAM6_35000 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLAM6_07390 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLAM6_00350 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CLAM6_32240 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLAM6_31960 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D CLAM6_09540 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CLAM6_31270 tatE; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D CLAM6_31280 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D CLAM6_31290 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D CLAM6_09260 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLAM6_00850 lspA_1; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CLAM6_32920 lspA_2; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cobe04122] D CLAM6_29410 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLAM6_09040 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLAM6_10590 hypothetical protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLAM6_05850 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CLAM6_30110 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CLAM6_12110 tusB; protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D CLAM6_12100 tusC; protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D CLAM6_12090 hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D CLAM6_12120 sulfurtransferase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D CLAM6_27800 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CLAM6_23980 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CLAM6_23970 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CLAM6_06560 thiF; adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D CLAM6_23990 hypothetical protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CLAM6_16310 moaB2; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D CLAM6_01050 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:cobe03018] D CLAM6_27110 hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CLAM6_08830 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CLAM6_09170 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D CLAM6_31010 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLAM6_01780 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CLAM6_05920 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CLAM6_12070 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CLAM6_03250 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLAM6_04800 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLAM6_31400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CLAM6_23950 MBL fold hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D CLAM6_01570 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLAM6_27220 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLAM6_10690 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D CLAM6_31320 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CLAM6_26480 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CLAM6_01840 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cobe03030] D CLAM6_15710 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_29750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_31450 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLAM6_28100 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLAM6_08980 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLAM6_06030 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLAM6_02920 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLAM6_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLAM6_03310 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLAM6_30430 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CLAM6_33240 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CLAM6_15700 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CLAM6_31460 hypothetical protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CLAM6_02340 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLAM6_03840 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cobe03410] D CLAM6_23720 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CLAM6_24180 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CLAM6_02220 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CLAM6_31820 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CLAM6_30870 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CLAM6_34160 crc; catabolite repression control protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CLAM6_09150 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CLAM6_02340 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLAM6_32150 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLAM6_03840 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cobe03420] D CLAM6_08560 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CLAM6_33260 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CLAM6_19330 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CLAM6_25810 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CLAM6_34500 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLAM6_09030 uvrD1; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLAM6_02340 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLAM6_03840 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLAM6_16240 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:cobe03430] D CLAM6_30990 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CLAM6_10670 hypothetical protein K03572 mutL; DNA mismatch repair protein MutL D CLAM6_34500 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLAM6_09030 uvrD1; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLAM6_32320 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D CLAM6_04020 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CLAM6_00460 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CLAM6_32150 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLAM6_33240 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CLAM6_31450 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLAM6_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLAM6_28100 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLAM6_06030 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLAM6_08980 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLAM6_15710 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_29750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_02920 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLAM6_03840 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cobe03440] D CLAM6_32150 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLAM6_33240 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CLAM6_00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CLAM6_09290 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CLAM6_28080 recR; recombination protein RecR K06187 recR; recombination protein RecR D CLAM6_30970 recA; protein RecA K03553 recA; recombination protein RecA D CLAM6_02340 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLAM6_16860 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CLAM6_16870 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CLAM6_16850 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CLAM6_34320 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CLAM6_04880 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CLAM6_04870 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CLAM6_04890 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CLAM6_31450 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLAM6_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLAM6_28100 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLAM6_06030 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLAM6_08980 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLAM6_15710 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_29750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_02920 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLAM6_31170 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus D CLAM6_32310 peptidase M16 K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cobe02010] D CLAM6_24060 modA2; tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D CLAM6_24050 modB2; ABC transporter permease K05773 tupB; tungstate transport system permease protein D CLAM6_24040 hypothetical protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D CLAM6_12010 hypothetical protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D CLAM6_12020 tauC; ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D CLAM6_12030 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D CLAM6_28840 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLAM6_28830 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D CLAM6_28820 modC; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CLAM6_05890 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLAM6_13200 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLAM6_28150 afuA; periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLAM6_05900 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CLAM6_13220 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CLAM6_13210 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CLAM6_25770 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CLAM6_16630 potD_3; spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLAM6_06610 potD_1; polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLAM6_06620 potD_2; polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLAM6_06600 hypothetical protein K11070 potC; spermidine/putrescine transport system permease protein D CLAM6_16620 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D CLAM6_16610 potB; spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D CLAM6_06590 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D CLAM6_06580 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CLAM6_16600 potA; spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CLAM6_06390 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_14600 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_02430 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_12330 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_16480 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_16470 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D CLAM6_16460 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CLAM6_25340 ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D CLAM6_25350 hypothetical protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLAM6_11470 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLAM6_19070 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLAM6_11440 maltose ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D CLAM6_11450 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D CLAM6_11460 mannitol ABC transporter permease K10229 smoG; polyol transport system permease protein D CLAM6_06990 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D CLAM6_06980 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CLAM6_06970 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CLAM6_07000 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D CLAM6_06960 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CLAM6_18360 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CLAM6_18350 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D CLAM6_18340 rbsA; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CLAM6_18330 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D CLAM6_11780 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D CLAM6_11740 ABC transporter permease K17322 glpP; glycerol transport system permease protein D CLAM6_11750 sugar ABC transporter permease K17323 glpQ; glycerol transport system permease protein D CLAM6_11720 ABC transporter K17324 glpS; glycerol transport system ATP-binding protein D CLAM6_11730 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D CLAM6_06330 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D CLAM6_06320 ugpA; glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D CLAM6_06310 ugpEc; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D CLAM6_06300 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D CLAM6_34470 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CLAM6_05570 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLAM6_05580 hypothetical protein K02037 pstC; phosphate transport system permease protein D CLAM6_34460 hypothetical protein K02037 pstC; phosphate transport system permease protein D CLAM6_34450 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D CLAM6_05590 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D CLAM6_34440 pstB_2; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLAM6_05600 pstB_1; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLAM6_14530 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CLAM6_14540 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CLAM6_07520 phnD; putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CLAM6_14560 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CLAM6_14570 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CLAM6_07500 phnC_1; phosphate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D CLAM6_14550 phnC_2; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CLAM6_07510 phnC1; phosphonates import ATP-binding protein PhnC 1 K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CLAM6_34760 glnH; amino acid ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein D CLAM6_34750 glnP; glutamine transport system permease protein GlnP K10037 glnP; glutamine transport system permease protein D CLAM6_34740 arginine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_00560 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D CLAM6_00570 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D CLAM6_00580 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D CLAM6_00590 arginine ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_10870 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D CLAM6_10880 ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D CLAM6_10890 arginine ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D CLAM6_29000 argT; ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D CLAM6_28970 amino acid-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D CLAM6_28990 aotM; arginine/ornithine transporter AotM K10023 aotM; arginine/ornithine transport system permease protein D CLAM6_28980 histidine/lysine/arginine/ornithine ABC transporter permease HisQ K10024 aotQ; arginine/ornithine transport system permease protein D CLAM6_28960 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_02450 ABC transporter ATP-binding protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_19320 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLAM6_30350 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLAM6_19310 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CLAM6_30340 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CLAM6_19300 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D CLAM6_30330 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D CLAM6_19290 braF; high-affinity branched-chain amino acid transport ATP-binding protein BraF K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLAM6_30370 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLAM6_19280 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLAM6_30360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLAM6_24250 metQ; lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D CLAM6_24240 metI; D-methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D CLAM6_24230 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D CLAM6_22450 urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D CLAM6_22440 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein D CLAM6_22430 ABC transporter permease K11961 urtC; urea transport system permease protein D CLAM6_22420 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D CLAM6_22410 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D CLAM6_32050 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLAM6_32060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLAM6_32070 oppB; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D CLAM6_32080 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D CLAM6_32090 oppD; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CLAM6_15650 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D CLAM6_15640 ABC transporter permease K13894 yejB; microcin C transport system permease protein D CLAM6_15630 ABC transporter permease K13895 yejE; microcin C transport system permease protein D CLAM6_15620 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D CLAM6_13610 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CLAM6_01470 siderophore ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D CLAM6_13600 ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D CLAM6_13590 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CLAM6_01480 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CLAM6_01490 cobalamin/Fe3+-siderophore ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CLAM6_13580 iron-dicitrate ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CLAM6_04640 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CLAM6_04630 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D CLAM6_04650 iron-hydroxamate transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CLAM6_22290 znuA2; zinc transporter K09815 znuA; zinc transport system substrate-binding protein D CLAM6_17320 cation ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D CLAM6_17300 membrane protein K09816 znuB; zinc transport system permease protein D CLAM6_22310 znuB2; membrane protein K09816 znuB; zinc transport system permease protein D CLAM6_17310 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CLAM6_22300 znuC2; zinc import ATP-binding protein ZnuC 2 K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CLAM6_21440 kpsE; capsule polysaccharide export inner-membrane protein KpsE K10107 kpsE; capsular polysaccharide transport system permease protein D CLAM6_21460 transport permease protein K09688 kpsM; capsular polysaccharide transport system permease protein D CLAM6_21450 kpsT; ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D CLAM6_08710 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D CLAM6_08720 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CLAM6_03760 hypothetical protein K02196 ccmD; heme exporter protein D D CLAM6_03750 ccmC; heme ABC transporter permease K02195 ccmC; heme exporter protein C D CLAM6_03740 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B D CLAM6_03730 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D CLAM6_02960 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CLAM6_02970 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CLAM6_06900 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CLAM6_31940 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CLAM6_31950 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLAM6_08770 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CLAM6_34980 mdlA; multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CLAM6_34970 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CLAM6_29220 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D CLAM6_05080 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CLAM6_19970 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CLAM6_05090 cydD; cysteine/glutathione ABC transporter membrane protein/ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CLAM6_19980 thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CLAM6_15560 ABC transporter ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cobe02060] D CLAM6_28750 fruI; PTS fructose transporter subunit FruI K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D CLAM6_28730 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLAM6_28740 fruK; phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CLAM6_27100 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D CLAM6_06850 HPr kinase K08485 ptsO; phosphocarrier protein NPr D CLAM6_06870 ptsN; nitrogen regulatory protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cobe03070] D CLAM6_26610 channel protein TolC K12340 tolC; outer membrane protein D CLAM6_29350 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CLAM6_29360 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CLAM6_33660 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CLAM6_01710 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CLAM6_33330 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CLAM6_29340 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CLAM6_35000 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLAM6_07390 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLAM6_31960 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D CLAM6_00350 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CLAM6_32240 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLAM6_31270 tatE; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D CLAM6_31280 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D CLAM6_31290 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:cobe02020] D CLAM6_34410 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLAM6_34400 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CLAM6_23610 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CLAM6_05390 eddA; extracelullar DNA degradation protein EddA K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CLAM6_34470 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CLAM6_05570 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLAM6_03650 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CLAM6_03640 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D CLAM6_09240 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D CLAM6_28680 two-component sensor histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CLAM6_28690 DNA-binding response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D CLAM6_19510 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CLAM6_19520 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CLAM6_18280 hypothetical protein K02403 flhD; flagellar transcriptional activator FlhD D CLAM6_18270 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CLAM6_17850 flaA; flagellin K02406 fliC; flagellin D CLAM6_17840 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CLAM6_18260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D CLAM6_28120 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D CLAM6_11240 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D CLAM6_13970 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D CLAM6_20690 C4-dicarboxylate ABC transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D CLAM6_20850 C4-dicarboxylate ABC transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D CLAM6_11250 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D CLAM6_20700 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D CLAM6_11280 tricarboxylic transport membrane protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_20710 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_11260 C4-dicarboxylate ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_13980 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_20830 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_09640 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CLAM6_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLAM6_14780 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CLAM6_03870 two-component system sensor histidine kinase DcuS K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3] D CLAM6_03880 malR; transcriptional regulatory protein MalR K11615 malR; two-component system, CitB family, response regulator MalR D CLAM6_31750 maeA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CLAM6_03860 citrate:sodium symporter K11616 maeN; malate:Na+ symporter D CLAM6_13810 hypothetical protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D CLAM6_09320 gacS; histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CLAM6_25800 gacA; response regulator GacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CLAM6_30930 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CLAM6_31630 glnD; bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D CLAM6_34040 ntrB; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CLAM6_34030 ntrC; sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D CLAM6_34060 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06660 spuI; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_14370 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_30790 atoE; short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_33750 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D CLAM6_02700 dctB; two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D CLAM6_33760 hypothetical protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D CLAM6_02710 dctD; C4-dicarboxylate transport transcriptional regulatory protein DctD K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D CLAM6_06890 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CLAM6_07470 pilA; fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D CLAM6_03990 sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CLAM6_04010 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D CLAM6_18210 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLAM6_00610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_13500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_15870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_18220 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D CLAM6_18230 cheW-2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLAM6_18240 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLAM6_18190 cheY; two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLAM6_18200 cheB1; chemotaxis response regulator protein-glutamate methylesterase 1 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLAM6_02240 hypothetical protein K10912 luxO; two-component system, repressor protein LuxO D CLAM6_27020 dctP_4; C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP D CLAM6_27010 dctQ_2; C4-dicarboxylate ABC transporter permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D CLAM6_17800 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_27000 dctM; C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_01230 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_14680 membrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_25320 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_08020 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CLAM6_19480 roxS; two-component sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D CLAM6_19490 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA D CLAM6_07120 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CLAM6_07130 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D CLAM6_07140 cytochrome c K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D CLAM6_03150 cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D CLAM6_03140 ccoO1; cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D CLAM6_11100 cytochrome bd oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLAM6_20000 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLAM6_22530 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLAM6_11110 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLAM6_19990 ubiquinol oxidase subunit II, cyanide insensitive K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLAM6_22540 cioB; cyanide insensitive terminal oxidase K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLAM6_26610 channel protein TolC K12340 tolC; outer membrane protein D CLAM6_21840 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CLAM6_23160 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CLAM6_23320 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CLAM6_07680 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein D CLAM6_08810 ptpA; phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CLAM6_19590 yccY; phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CLAM6_21830 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_23150 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_23310 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_21410 nfrC; UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLAM6_21400 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CLAM6_04910 hypothetical protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D CLAM6_18130 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D CLAM6_07120 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cobe02024] D CLAM6_00060 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CLAM6_02240 hypothetical protein K10912 luxO; two-component system, repressor protein LuxO D CLAM6_10690 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D CLAM6_06230 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CLAM6_06240 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CLAM6_09190 aroF-1; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLAM6_31340 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLAM6_19510 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CLAM6_19520 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CLAM6_03990 sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CLAM6_04010 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D CLAM6_18280 hypothetical protein K02403 flhD; flagellar transcriptional activator FlhD D CLAM6_18270 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CLAM6_11680 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CLAM6_19730 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CLAM6_11700 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CLAM6_19760 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CLAM6_11690 polyamine ABC transporter substrate-binding protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CLAM6_19750 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CLAM6_11670 polyamine-transporting ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CLAM6_19770 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CLAM6_19320 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLAM6_30350 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLAM6_19310 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CLAM6_30340 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CLAM6_19300 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D CLAM6_30330 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D CLAM6_19290 braF; high-affinity branched-chain amino acid transport ATP-binding protein BraF K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLAM6_30370 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLAM6_19280 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLAM6_30360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLAM6_05490 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_16680 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_17340 zur; transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D CLAM6_00520 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CLAM6_26320 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CLAM6_32580 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLAM6_32050 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLAM6_32060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLAM6_32070 oppB; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D CLAM6_32080 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D CLAM6_32090 oppD; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CLAM6_15140 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CLAM6_17160 dppA; cytochrome c K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CLAM6_13430 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CLAM6_13410 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CLAM6_15150 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CLAM6_17150 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CLAM6_15160 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CLAM6_17140 dppC; ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CLAM6_13400 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CLAM6_15170 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CLAM6_17130 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CLAM6_13390 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CLAM6_17120 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D CLAM6_35000 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLAM6_33660 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CLAM6_01710 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CLAM6_33330 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CLAM6_29340 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CLAM6_07390 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLAM6_31960 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D CLAM6_00350 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CLAM6_32240 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cobe02030] D CLAM6_00610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_13500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_15870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_18220 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D CLAM6_18360 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CLAM6_18240 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLAM6_18230 cheW-2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLAM6_18190 cheY; two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLAM6_18180 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D CLAM6_18200 cheB1; chemotaxis response regulator protein-glutamate methylesterase 1 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLAM6_18210 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLAM6_17880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLAM6_17940 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLAM6_17950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLAM6_18260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D CLAM6_18250 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cobe02040] D CLAM6_17860 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D CLAM6_17870 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D CLAM6_17880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLAM6_17890 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CLAM6_17900 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLAM6_17910 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D CLAM6_17920 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D CLAM6_17930 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CLAM6_17940 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLAM6_17950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLAM6_17960 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D CLAM6_17970 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLAM6_17980 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLAM6_17990 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CLAM6_18160 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLAM6_18170 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CLAM6_18100 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CLAM6_18090 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CLAM6_18080 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CLAM6_18070 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CLAM6_18060 flagellar basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D CLAM6_18050 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CLAM6_18040 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D CLAM6_18030 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D CLAM6_18020 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CLAM6_18010 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1 D CLAM6_18000 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D CLAM6_17850 flaA; flagellin K02406 fliC; flagellin D CLAM6_18320 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D CLAM6_18310 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CLAM6_18260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D CLAM6_18250 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D CLAM6_18130 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D CLAM6_18140 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D CLAM6_30420 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CLAM6_18280 hypothetical protein K02403 flhD; flagellar transcriptional activator FlhD D CLAM6_18270 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CLAM6_06890 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CLAM6_17840 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CLAM6_31010 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D CLAM6_17520 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cobe01501] D CLAM6_07700 integral membrane signal transducer protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D CLAM6_08520 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CLAM6_32050 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLAM6_32060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLAM6_32070 oppB; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D CLAM6_32080 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D CLAM6_32090 oppD; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CLAM6_14920 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D CLAM6_09530 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLAM6_09520 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CLAM6_26610 channel protein TolC K12340 tolC; outer membrane protein D CLAM6_31130 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLAM6_08290 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLAM6_07240 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cobe01502] D CLAM6_14780 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CLAM6_07320 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLAM6_26600 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D CLAM6_07260 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CLAM6_07270 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLAM6_07300 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cobe01503] D CLAM6_10660 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLAM6_09240 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D CLAM6_01290 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CLAM6_09530 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLAM6_09520 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CLAM6_26610 channel protein TolC K12340 tolC; outer membrane protein D CLAM6_31480 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cobe01000] C 01001 Protein kinases [BR:cobe01001] D CLAM6_19670 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CLAM6_12750 putative kinase Y4mE K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CLAM6_21830 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_23150 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_23310 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_34410 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLAM6_03650 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CLAM6_28680 two-component sensor histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CLAM6_19510 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CLAM6_09320 gacS; histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CLAM6_03870 two-component system sensor histidine kinase DcuS K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3] D CLAM6_34040 ntrB; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CLAM6_03990 sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CLAM6_33750 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D CLAM6_02700 dctB; two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D CLAM6_24080 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D CLAM6_18240 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLAM6_19480 roxS; two-component sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D CLAM6_04910 hypothetical protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cobe01009] D CLAM6_09860 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D CLAM6_10520 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:cobe01002] D CLAM6_00850 lspA_1; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CLAM6_32920 lspA_2; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CLAM6_07440 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CLAM6_09390 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D CLAM6_04040 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CLAM6_06670 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase D CLAM6_28000 protein NlpC K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CLAM6_10220 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CLAM6_31050 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLAM6_34580 glmS_2; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLAM6_23220 glmS_1; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLAM6_02590 pfpI; protease K05520 yhbO; deglycase [EC:3.5.1.124] D CLAM6_28600 protease K05520 yhbO; deglycase [EC:3.5.1.124] D CLAM6_00870 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D CLAM6_23750 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CLAM6_33800 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D CLAM6_14780 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CLAM6_32310 peptidase M16 K01408 IDE; insulysin [EC:3.4.24.56] D CLAM6_02940 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CLAM6_04340 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLAM6_22590 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLAM6_14260 cpg2; glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D CLAM6_31670 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CLAM6_02570 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CLAM6_15830 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D CLAM6_04760 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D CLAM6_31620 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CLAM6_17100 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CLAM6_00280 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CLAM6_01670 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CLAM6_28340 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CLAM6_30120 putative beta-barrel assembly-enhancing protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D CLAM6_31540 putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CLAM6_21920 hypothetical protein K16922 yydH; putative peptide zinc metalloprotease protein D CLAM6_28890 hypothetical protein K09933 mtfA; MtfA peptidase D CLAM6_09240 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D CLAM6_07050 2-alkenal reductase K04691 hhoB; serine protease DegS [EC:3.4.21.-] D CLAM6_05440 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CLAM6_08330 dacC; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLAM6_30680 dacB; peptidase M15 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CLAM6_24960 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CLAM6_24940 lon_1; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CLAM6_26250 lon_2; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CLAM6_03720 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D CLAM6_08490 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CLAM6_14250 umuD; umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CLAM6_09260 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLAM6_00310 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CLAM6_06400 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CLAM6_08860 hypothetical protein K04773 sppA; protease IV [EC:3.4.21.-] D CLAM6_15740 protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D CLAM6_23840 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D CLAM6_31200 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D CLAM6_06180 ggtA; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLAM6_15970 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D CLAM6_06830 pmbA; PmbA protein K03592 pmbA; PmbA protein D CLAM6_06810 tldD; protease TldD K03568 tldD; TldD protein D CLAM6_10720 hflC; protein HflC K04087 hflC; modulator of FtsH protease HflC D CLAM6_10710 hflK; protease modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:cobe01003] D CLAM6_05260 hypothetical protein K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CLAM6_04330 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CLAM6_31130 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLAM6_26370 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cobe01005] D CLAM6_31480 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CLAM6_31470 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CLAM6_07360 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CLAM6_31510 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CLAM6_25030 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CLAM6_08780 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CLAM6_26590 htrB_1; lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CLAM6_26770 htrB_2; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CLAM6_02880 membrane protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D CLAM6_27890 membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D CLAM6_00180 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CLAM6_00150 kdkA; 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D CLAM6_31020 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CLAM6_08800 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CLAM6_06930 hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CLAM6_06940 kdsD; arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CLAM6_00110 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CLAM6_24550 hypothetical protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D CLAM6_21680 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D CLAM6_00160 glycosyl transferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D CLAM6_07180 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CLAM6_00070 gmhB; D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CLAM6_00170 hldE; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D CLAM6_00100 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CLAM6_11130 bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D CLAM6_23300 wcaJ_3; glycosyl transferase K21303 wecP; UDP-GalNAc:undecaprenyl-phosphate GalNAc-1-phosphate transferase [EC:2.7.8.40] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cobe01011] D CLAM6_07020 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLAM6_08820 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLAM6_07310 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CLAM6_07280 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLAM6_07250 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLAM6_07320 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLAM6_26600 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D CLAM6_28520 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3] D CLAM6_07270 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLAM6_07300 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CLAM6_29880 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLAM6_11880 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLAM6_32950 murJ; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CLAM6_31130 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLAM6_08290 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLAM6_07240 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLAM6_08330 dacC; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLAM6_30680 dacB; peptidase M15 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CLAM6_04330 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CLAM6_00870 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D CLAM6_14780 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CLAM6_28000 protein NlpC K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CLAM6_04760 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D CLAM6_09820 slt; murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CLAM6_08310 sltB1; soluble lytic transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D CLAM6_15660 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D CLAM6_30220 mltF; membrane-bound lytic murein transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D CLAM6_08960 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CLAM6_08320 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CLAM6_10660 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLAM6_19260 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLAM6_29950 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cobe01004] D CLAM6_08910 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLAM6_30730 fabY; beta-ketoacyl-[acyl-carrier-protein] synthase FabY K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D CLAM6_27500 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLAM6_33200 fabB; beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLAM6_08940 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLAM6_27530 fabF_2; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLAM6_08410 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_08920 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_20720 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_27190 speA_2; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_27520 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLAM6_33190 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D CLAM6_31490 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLAM6_20120 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CLAM6_29160 fabV; enoyl-[acyl-carrier-protein] reductase [NADH] K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D CLAM6_26470 tesA; arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CLAM6_30250 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CLAM6_34480 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D CLAM6_27310 thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D CLAM6_05630 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_29820 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLAM6_15760 acyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D CLAM6_05490 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_16680 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_25230 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D CLAM6_29860 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CLAM6_08900 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CLAM6_30490 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CLAM6_33210 lptA; lysophosphatidic acid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:cobe01008] D CLAM6_12350 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D CLAM6_15070 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:cobe01006] D CLAM6_00470 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CLAM6_33010 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CLAM6_31570 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLAM6_10680 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CLAM6_34390 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CLAM6_04520 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:cobe01007] D CLAM6_05100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLAM6_25010 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CLAM6_01860 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D CLAM6_02020 tyrS2; tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLAM6_30170 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLAM6_31770 hypothetical protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLAM6_25000 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLAM6_31180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLAM6_23630 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLAM6_32930 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLAM6_02900 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLAM6_06050 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLAM6_32030 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLAM6_16840 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLAM6_29480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLAM6_00090 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CLAM6_00080 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CLAM6_07840 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLAM6_26120 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLAM6_24510 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLAM6_30950 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLAM6_24470 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLAM6_24460 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLAM6_24760 phhC; aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLAM6_28330 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CLAM6_14980 aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D CLAM6_31640 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CLAM6_02050 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_13720 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_00990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLAM6_20410 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CLAM6_07940 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CLAM6_21590 wcbT; polyketide synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CLAM6_32400 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLAM6_14290 beta alanine--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D CLAM6_29140 aruC; succinylornithine transaminase/acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D CLAM6_18640 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CLAM6_17480 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D CLAM6_06680 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D CLAM6_23900 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CLAM6_34820 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CLAM6_02930 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLAM6_13230 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D CLAM6_27290 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CLAM6_15820 aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cobe00194] D CLAM6_34610 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CLAM6_20030 atpC2; ATP synthase epsilon chain 2 K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CLAM6_34620 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CLAM6_20020 atpD2; ATP synthase subunit beta 2 K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CLAM6_34630 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CLAM6_20100 hypothetical protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CLAM6_34640 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CLAM6_20090 hypothetical protein K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CLAM6_34650 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CLAM6_34660 atpF_2; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CLAM6_20080 atpF_1; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CLAM6_34670 atpE_2; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CLAM6_20070 atpE_1; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CLAM6_34680 atpB_2; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLAM6_20060 atpB_1; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLAM6_34690 atpI; F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I D CLAM6_20040 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cobe03000] D CLAM6_12900 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D CLAM6_15080 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT D CLAM6_30810 AraC family transcriptional regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D CLAM6_20370 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D CLAM6_15530 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D CLAM6_19890 cdhR; HTH-type transcriptional regulator CdhR K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D CLAM6_34230 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D CLAM6_04320 gbdR_1; protein GbdR K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D CLAM6_12890 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLAM6_28900 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLAM6_30390 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLAM6_32660 ilvY; transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D CLAM6_03680 XRE family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D CLAM6_34310 oxyR; transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CLAM6_24670 transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CLAM6_05690 cysB; CysB family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D CLAM6_11860 dhcR_1; transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D CLAM6_12360 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D CLAM6_16760 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D CLAM6_15000 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D CLAM6_17110 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D CLAM6_14300 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D CLAM6_08370 transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D CLAM6_10290 trpI; HTH-type transcriptional regulator TrpI K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator D CLAM6_00190 DeoR family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D CLAM6_06280 glpR_1; DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D CLAM6_24310 glpR_2; DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D CLAM6_18370 rbsR; transcriptional regulator RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLAM6_20760 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLAM6_14310 DNA-binding transcriptional regulator CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLAM6_19030 thuR; transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLAM6_28760 DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D CLAM6_28630 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D CLAM6_20240 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D CLAM6_33740 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CLAM6_20680 gntR; GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CLAM6_11590 glcC; transcriptional regulator K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D CLAM6_26420 hypothetical protein K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D CLAM6_22020 GntR family transcriptional regulator K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor D CLAM6_25550 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CLAM6_18620 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CLAM6_06380 betI; HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D CLAM6_28350 TetR family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D CLAM6_14970 TetR family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D CLAM6_31910 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D CLAM6_04230 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D CLAM6_16130 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D CLAM6_05030 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D CLAM6_05620 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D CLAM6_06550 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLAM6_24640 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLAM6_28540 AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D CLAM6_28580 ybaO; putative HTH-type transcriptional regulator YbaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D CLAM6_34900 helix-turn-helix transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D CLAM6_34910 hypothetical protein K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D CLAM6_05980 slyA_1; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D CLAM6_24720 slyA_2; MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D CLAM6_33100 transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D CLAM6_01540 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CLAM6_17340 zur; transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D CLAM6_25670 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D CLAM6_03120 anr; transcriptional activator protein anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CLAM6_29400 Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CLAM6_15390 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CLAM6_19660 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CLAM6_19830 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CLAM6_15750 hlyU; transcriptional activator HlyU K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D CLAM6_34510 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D CLAM6_07530 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D CLAM6_33680 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CLAM6_08060 putative Fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CLAM6_12640 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CLAM6_11710 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CLAM6_10450 regulatory protein LuxO K12266 norR; anaerobic nitric oxide reductase transcription regulator D CLAM6_11200 bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CLAM6_32010 transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D CLAM6_34700 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLAM6_07710 rfaH; transcription antitermination protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D CLAM6_26810 aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CLAM6_24730 phhR; transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D CLAM6_34090 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase D CLAM6_07880 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D CLAM6_00410 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CLAM6_00390 UPF0301 protein K07735 algH; putative transcriptional regulator D CLAM6_01870 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CLAM6_26330 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:cobe03021] D CLAM6_16240 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CLAM6_33280 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLAM6_33600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLAM6_33590 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLAM6_34270 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CLAM6_30420 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CLAM6_26620 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CLAM6_09200 algU; RNA polymerase sigma-H factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CLAM6_31350 rpoE; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CLAM6_31930 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D CLAM6_06890 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CLAM6_17840 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CLAM6_33050 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D CLAM6_01730 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CLAM6_26290 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CLAM6_33650 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CLAM6_07150 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D CLAM6_07160 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B D CLAM6_05530 fused response regulator/phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D CLAM6_07690 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist D CLAM6_09210 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA D CLAM6_09230 rseC; SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D CLAM6_01870 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CLAM6_01630 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CLAM6_10370 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D CLAM6_31400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cobe03019] D CLAM6_08830 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CLAM6_06790 cafA; axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-] D CLAM6_09270 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLAM6_23950 MBL fold hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D CLAM6_03250 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLAM6_10620 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CLAM6_09170 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D CLAM6_05920 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CLAM6_12070 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CLAM6_04800 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLAM6_31010 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLAM6_01780 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CLAM6_31400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CLAM6_01570 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLAM6_27220 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLAM6_10690 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D CLAM6_31320 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CLAM6_26480 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CLAM6_01840 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CLAM6_27110 hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CLAM6_30930 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CLAM6_25090 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A D CLAM6_06860 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ D CLAM6_05500 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:cobe03011] D CLAM6_27250 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CLAM6_31610 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CLAM6_33470 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CLAM6_33300 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CLAM6_33360 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CLAM6_03270 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CLAM6_33570 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CLAM6_33390 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CLAM6_07110 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CLAM6_33540 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CLAM6_33310 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CLAM6_33580 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CLAM6_33320 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CLAM6_33400 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CLAM6_01770 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CLAM6_32230 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CLAM6_33440 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CLAM6_03280 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CLAM6_33490 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CLAM6_32960 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CLAM6_30440 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CLAM6_33630 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CLAM6_33500 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CLAM6_33530 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CLAM6_33520 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CLAM6_33410 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CLAM6_33380 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CLAM6_03300 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CLAM6_33620 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CLAM6_33640 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CLAM6_33610 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CLAM6_07100 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CLAM6_33430 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CLAM6_33340 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CLAM6_33460 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CLAM6_33270 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CLAM6_33370 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CLAM6_32200 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CLAM6_24480 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CLAM6_33000 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CLAM6_33480 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CLAM6_33510 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CLAM6_33420 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CLAM6_32990 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CLAM6_31840 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CLAM6_33450 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CLAM6_33350 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CLAM6_31160 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CLAM6_08890 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CLAM6_31830 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CLAM6_24490 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CLAM6_06460 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:cobe03009] D CLAM6_09270 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLAM6_19670 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CLAM6_10620 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CLAM6_09280 era; GTPase Era K03595 era; GTPase D CLAM6_32980 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D CLAM6_01870 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CLAM6_01730 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CLAM6_26290 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CLAM6_33650 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CLAM6_12320 rsuA; pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CLAM6_01150 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CLAM6_30540 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CLAM6_29660 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CLAM6_10360 rsmC; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D CLAM6_31970 ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CLAM6_00360 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CLAM6_03450 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CLAM6_34720 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CLAM6_07220 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CLAM6_07210 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CLAM6_29870 rsmJ; ribosomal RNA small subunit methyltransferase J K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D CLAM6_01080 SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CLAM6_03260 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CLAM6_01660 rlmE; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D CLAM6_12180 rlmF; ribosomal RNA large subunit methyltransferase F K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D CLAM6_08280 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CLAM6_31810 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CLAM6_28460 rlmL; ribosomal RNA large subunit methyltransferase K/L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D CLAM6_05830 rlmM; ribosomal RNA large subunit methyltransferase M K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D CLAM6_29440 rlmN; dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CLAM6_09340 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CLAM6_04070 RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLAM6_16490 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLAM6_33060 rluA; pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLAM6_30140 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CLAM6_08840 rluC; pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CLAM6_32710 rluD; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CLAM6_27780 hypothetical protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D CLAM6_34570 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D CLAM6_23590 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D CLAM6_31990 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CLAM6_10840 rimK; putative alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D CLAM6_34000 hypothetical protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D CLAM6_32220 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CLAM6_13540 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D CLAM6_08080 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CLAM6_10050 prmB; 50S ribosomal protein L3 glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D CLAM6_27840 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D CLAM6_08830 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CLAM6_06790 cafA; axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-] D CLAM6_00400 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CLAM6_04160 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D CLAM6_04800 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLAM6_10610 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CLAM6_29510 der; GTPase Der K03977 engA; GTPase D CLAM6_28320 rbgA; ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A D CLAM6_10700 hflX; GTPase HflX K03665 hflX; GTPase D CLAM6_29600 tsaC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CLAM6_34280 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CLAM6_01750 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CLAM6_01720 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CLAM6_08270 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D CLAM6_01650 putative RNA-binding protein K07574 yhbY; RNA-binding protein D CLAM6_06820 hypothetical protein K09889 yjgA; ribosome-associated protein D CLAM6_28470 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor D CLAM6_06880 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D CLAM6_06440 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase D CLAM6_08880 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cobe03016] D CLAM6_30500 cca; multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CLAM6_05100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLAM6_26120 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLAM6_32930 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLAM6_06050 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLAM6_23630 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLAM6_25010 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CLAM6_31180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLAM6_32030 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLAM6_16840 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLAM6_30950 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLAM6_24510 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLAM6_07840 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLAM6_25000 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLAM6_02900 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLAM6_29480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLAM6_24470 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLAM6_24460 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLAM6_02020 tyrS2; tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLAM6_30170 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLAM6_31770 hypothetical protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLAM6_01240 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CLAM6_03510 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CLAM6_11380 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CLAM6_01070 trmB_1; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CLAM6_30720 trmB_2; SAM-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CLAM6_30030 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D CLAM6_10160 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CLAM6_01760 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CLAM6_26670 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D CLAM6_29410 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLAM6_29600 tsaC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CLAM6_10680 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CLAM6_34990 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CLAM6_34730 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CLAM6_16270 hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CLAM6_21510 cysQ_1; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CLAM6_24580 cysQ_2; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CLAM6_35010 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CLAM6_25740 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D CLAM6_34170 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CLAM6_05290 rnb; exoribonuclease 2 K01147 rnb; exoribonuclease II [EC:3.1.13.1] D CLAM6_28070 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CLAM6_26550 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D CLAM6_00090 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CLAM6_00080 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CLAM6_01860 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D CLAM6_32480 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CLAM6_30240 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CLAM6_05020 dusA; tRNA-dihydrouridine(20/20a) synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D CLAM6_08070 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CLAM6_30920 dusC; tRNA-dihydrouridine(16) synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D CLAM6_06130 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CLAM6_10470 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D CLAM6_10460 cmoB; tRNA U34 carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D CLAM6_10350 cmoM; tRNA 5-carboxymethoxyuridine methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D CLAM6_28510 trmA; tRNA/tmRNA (uracil-C(5))-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D CLAM6_32210 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CLAM6_27230 trmJ_1; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D CLAM6_29380 trmJ_2; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D CLAM6_34130 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CLAM6_03060 hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D CLAM6_04070 RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLAM6_16490 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLAM6_33060 rluA; pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLAM6_27800 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CLAM6_29730 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CLAM6_05850 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CLAM6_30110 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CLAM6_12110 tusB; protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D CLAM6_12100 tusC; protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D CLAM6_12090 hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D CLAM6_12120 sulfurtransferase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D CLAM6_29420 iscA; iron-binding protein IscA K13628 iscA; iron-sulfur cluster assembly protein D CLAM6_19360 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D CLAM6_25050 hypothetical protein K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D CLAM6_03890 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D CLAM6_29320 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CLAM6_24840 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CLAM6_24850 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CLAM6_28280 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CLAM6_10630 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D CLAM6_02110 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D CLAM6_29330 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CLAM6_31430 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CLAM6_02560 tmcA; tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D CLAM6_29890 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CLAM6_30460 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CLAM6_10650 tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CLAM6_03050 ygdL; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CLAM6_03250 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLAM6_01780 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cobe03012] D CLAM6_33970 translation initiation factor K03113 EIF1; translation initiation factor 1 D CLAM6_01740 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CLAM6_24500 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CLAM6_01140 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CLAM6_31600 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CLAM6_33550 tufA; elongation factor Tu K02358 tuf; elongation factor Tu D CLAM6_33560 fusA; elongation factor G K02355 fusA; elongation factor G D CLAM6_06530 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CLAM6_31580 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor D CLAM6_06540 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CLAM6_06450 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CLAM6_27730 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CLAM6_10560 efp; elongation factor P K02356 efp; elongation factor P D CLAM6_10570 epmA; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D CLAM6_10550 EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D CLAM6_05880 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D CLAM6_32040 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D CLAM6_19400 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D CLAM6_13890 hypothetical protein K09890 arfA; alternative ribosome-rescue factor D CLAM6_19150 yaeJ; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:cobe03110] D CLAM6_27740 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D CLAM6_32690 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CLAM6_24950 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CLAM6_31210 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D CLAM6_09860 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D CLAM6_01570 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLAM6_27220 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLAM6_01580 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CLAM6_26150 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33 D CLAM6_01560 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D CLAM6_26160 heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D CLAM6_27210 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D CLAM6_09240 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D CLAM6_01670 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CLAM6_34680 atpB_2; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLAM6_20060 atpB_1; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLAM6_00350 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CLAM6_29280 hypothetical protein K09796 pccA; periplasmic copper chaperone A D CLAM6_25020 ppiB; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CLAM6_24920 ppiD; peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D CLAM6_01120 mip; outer membrane protein MIP K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D CLAM6_32910 peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D CLAM6_07720 slyD_1; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D CLAM6_27910 slyD_2; peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D CLAM6_26830 ppiC2; peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D CLAM6_28250 ppiC1; peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D CLAM6_30560 surA; chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D CLAM6_05670 thioredoxin K03671 TXN; thioredoxin D CLAM6_19840 hypothetical protein K03671 TXN; thioredoxin D CLAM6_31410 trxA; thioredoxin K03671 TXN; thioredoxin D CLAM6_25440 trxC; thiol disulfide reductase thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D CLAM6_32390 thioredoxin-like protein K05838 ybbN; putative thioredoxin D CLAM6_11960 grxA; glutaredoxin, GrxA family protein K03674 grxA; glutaredoxin 1 D CLAM6_25750 ydhD; glutaredoxin K07390 grxD; monothiol glutaredoxin D CLAM6_01290 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CLAM6_27150 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D CLAM6_32180 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CLAM6_08120 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D CLAM6_03790 thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:cobe04131] D CLAM6_29430 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLAM6_09540 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CLAM6_08570 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLAM6_26930 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLAM6_08450 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLAM6_09860 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:cobe03051] D CLAM6_09860 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:cobe03032] D CLAM6_15700 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CLAM6_34360 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CLAM6_24930 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CLAM6_24450 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CLAM6_24390 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CLAM6_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLAM6_03310 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLAM6_30430 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CLAM6_33240 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CLAM6_31450 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLAM6_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLAM6_02920 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLAM6_06030 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLAM6_08980 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLAM6_15710 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_29750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_28100 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLAM6_31460 hypothetical protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CLAM6_02340 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLAM6_03840 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLAM6_23520 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D CLAM6_27300 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CLAM6_00040 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CLAM6_10510 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLAM6_10500 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLAM6_08460 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CLAM6_07580 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cobe03036] D CLAM6_09270 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLAM6_23960 hypothetical protein K03746 hns; DNA-binding protein H-NS D CLAM6_34360 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CLAM6_24930 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CLAM6_24450 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CLAM6_24390 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CLAM6_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLAM6_02660 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D CLAM6_08060 putative Fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CLAM6_10690 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D CLAM6_24670 transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CLAM6_06550 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLAM6_24640 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLAM6_12970 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D CLAM6_03820 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein D CLAM6_30160 hypothetical protein K05896 scpA; segregation and condensation protein A D CLAM6_30150 hypothetical protein K06024 scpB; segregation and condensation protein B D CLAM6_07340 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D CLAM6_26700 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D CLAM6_31950 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLAM6_07240 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLAM6_27700 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CLAM6_07230 hypothetical protein K03586 ftsL; cell division protein FtsL D CLAM6_07330 hypothetical protein K03589 ftsQ; cell division protein FtsQ D CLAM6_07290 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CLAM6_31940 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CLAM6_07350 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLAM6_03830 hypothetical protein K03528 zipA; cell division protein ZipA D CLAM6_00260 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D CLAM6_31980 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB D CLAM6_07080 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D CLAM6_10660 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLAM6_09530 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLAM6_32350 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CLAM6_32340 minD; site-determining protein K03609 minD; septum site-determining protein MinD D CLAM6_32330 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D CLAM6_31910 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D CLAM6_06740 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLAM6_06750 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CLAM6_06760 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CLAM6_08300 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D CLAM6_34710 soj; chromosome partitioning protein Soj K03496 parA; chromosome partitioning protein D CLAM6_34700 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLAM6_10510 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLAM6_10500 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLAM6_34730 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CLAM6_34720 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CLAM6_01340 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CLAM6_32190 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CLAM6_23580 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CLAM6_01310 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:cobe03400] D CLAM6_33110 phr; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CLAM6_24180 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CLAM6_02220 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CLAM6_23720 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CLAM6_16240 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CLAM6_07410 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CLAM6_31870 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CLAM6_30810 AraC family transcriptional regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D CLAM6_03360 deoxyribodipyrimidine photo-lyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D CLAM6_30870 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CLAM6_31820 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CLAM6_34160 crc; catabolite repression control protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CLAM6_09150 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CLAM6_04820 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D CLAM6_32150 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLAM6_03840 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLAM6_02340 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLAM6_33260 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CLAM6_19330 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CLAM6_25810 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CLAM6_34500 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLAM6_09030 uvrD1; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLAM6_33600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLAM6_33590 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLAM6_33280 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLAM6_34270 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CLAM6_08560 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CLAM6_30990 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CLAM6_10670 hypothetical protein K03572 mutL; DNA mismatch repair protein MutL D CLAM6_32320 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D CLAM6_04020 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CLAM6_00460 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CLAM6_31450 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLAM6_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLAM6_02920 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLAM6_06030 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLAM6_08980 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLAM6_15710 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_29750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLAM6_28100 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLAM6_33240 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CLAM6_04880 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CLAM6_04870 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CLAM6_04890 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CLAM6_30970 recA; protein RecA K03553 recA; recombination protein RecA D CLAM6_16860 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CLAM6_16870 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CLAM6_16850 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CLAM6_31170 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CLAM6_04830 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D CLAM6_04840 sbcD; nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D CLAM6_02080 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CLAM6_00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CLAM6_34320 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CLAM6_09290 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CLAM6_28080 recR; recombination protein RecR K06187 recR; recombination protein RecR D CLAM6_01550 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CLAM6_27330 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D CLAM6_30180 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD D CLAM6_26200 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D CLAM6_27300 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CLAM6_00040 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CLAM6_08460 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CLAM6_34360 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CLAM6_24930 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CLAM6_08060 putative Fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CLAM6_24450 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CLAM6_24390 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CLAM6_23960 hypothetical protein K03746 hns; DNA-binding protein H-NS D CLAM6_23930 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CLAM6_14240 SOS mutagenesis and repair protein UmuC K03502 umuC; DNA polymerase V D CLAM6_14250 umuD; umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CLAM6_03720 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D CLAM6_08490 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CLAM6_15550 polB; DNA polymerase K02336 polB; DNA polymerase II [EC:2.7.7.7] D CLAM6_34120 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D CLAM6_09180 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CLAM6_03630 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLAM6_03620 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cobe03029] D CLAM6_07130 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D CLAM6_01740 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CLAM6_24500 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CLAM6_31600 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CLAM6_33550 tufA; elongation factor Tu K02358 tuf; elongation factor Tu D CLAM6_33560 fusA; elongation factor G K02355 fusA; elongation factor G D CLAM6_09280 era; GTPase Era K03595 era; GTPase D CLAM6_02020 tyrS2; tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLAM6_06050 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLAM6_16840 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLAM6_31180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLAM6_06720 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLAM6_13510 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLAM6_14020 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLAM6_14660 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLAM6_06710 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CLAM6_06730 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CLAM6_03240 hypothetical protein K01173 ENDOG; endonuclease G, mitochondrial D CLAM6_33240 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CLAM6_31530 opr86; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CLAM6_01570 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLAM6_01560 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D CLAM6_27220 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLAM6_27210 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D CLAM6_01580 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CLAM6_29410 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLAM6_25750 ydhD; glutaredoxin K07390 grxD; monothiol glutaredoxin D CLAM6_23580 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CLAM6_04520 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CLAM6_09590 ctaG; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D CLAM6_09640 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CLAM6_35000 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLAM6_09620 SURF1-like protein K14998 SURF1; surfeit locus 1 family protein D CLAM6_01110 hypothetical protein K07152 SCO1; protein SCO1 D CLAM6_14130 hypothetical protein K07152 SCO1; protein SCO1 D CLAM6_09860 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cobe02000] D CLAM6_08770 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CLAM6_34980 mdlA; multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CLAM6_34970 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CLAM6_29220 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D CLAM6_05080 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CLAM6_19970 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CLAM6_05090 cydD; cysteine/glutathione ABC transporter membrane protein/ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CLAM6_19980 thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CLAM6_15560 ABC transporter ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D CLAM6_05950 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D CLAM6_28840 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLAM6_28830 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D CLAM6_28820 modC; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CLAM6_24060 modA2; tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D CLAM6_24050 modB2; ABC transporter permease K05773 tupB; tungstate transport system permease protein D CLAM6_24040 hypothetical protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D CLAM6_05890 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLAM6_13200 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLAM6_28150 afuA; periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLAM6_05900 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CLAM6_13220 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CLAM6_13210 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CLAM6_25770 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CLAM6_16630 potD_3; spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLAM6_06610 potD_1; polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLAM6_06620 potD_2; polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLAM6_06600 hypothetical protein K11070 potC; spermidine/putrescine transport system permease protein D CLAM6_16620 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D CLAM6_16610 potB; spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D CLAM6_06590 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D CLAM6_06580 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CLAM6_16600 potA; spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CLAM6_11680 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CLAM6_19730 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CLAM6_11700 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CLAM6_19760 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CLAM6_11690 polyamine ABC transporter substrate-binding protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CLAM6_19750 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CLAM6_11670 polyamine-transporting ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CLAM6_19770 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CLAM6_06390 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_14600 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_02430 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_12330 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_16480 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLAM6_16470 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D CLAM6_16460 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CLAM6_25340 ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D CLAM6_25350 hypothetical protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLAM6_12010 hypothetical protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D CLAM6_12020 tauC; ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D CLAM6_12030 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D CLAM6_27950 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein D CLAM6_27940 ABC transporter permease K05778 ynjC; putative thiamine transport system permease protein D CLAM6_13690 lipid kinase K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CLAM6_13680 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CLAM6_13670 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CLAM6_11470 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLAM6_19070 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLAM6_18360 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CLAM6_18350 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D CLAM6_18340 rbsA; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CLAM6_11780 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D CLAM6_11740 ABC transporter permease K17322 glpP; glycerol transport system permease protein D CLAM6_11750 sugar ABC transporter permease K17323 glpQ; glycerol transport system permease protein D CLAM6_11720 ABC transporter K17324 glpS; glycerol transport system ATP-binding protein D CLAM6_11730 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D CLAM6_06330 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D CLAM6_06320 ugpA; glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D CLAM6_06310 ugpEc; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D CLAM6_06300 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D CLAM6_11440 maltose ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D CLAM6_11450 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D CLAM6_11460 mannitol ABC transporter permease K10229 smoG; polyol transport system permease protein D CLAM6_06980 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CLAM6_06970 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CLAM6_06960 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CLAM6_06990 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D CLAM6_07000 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D CLAM6_19040 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CLAM6_19050 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D CLAM6_19060 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D CLAM6_34470 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CLAM6_05570 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLAM6_05580 hypothetical protein K02037 pstC; phosphate transport system permease protein D CLAM6_34460 hypothetical protein K02037 pstC; phosphate transport system permease protein D CLAM6_34450 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D CLAM6_05590 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D CLAM6_34440 pstB_2; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLAM6_05600 pstB_1; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLAM6_14530 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CLAM6_14540 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CLAM6_07520 phnD; putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CLAM6_14560 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CLAM6_14570 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CLAM6_07500 phnC_1; phosphate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D CLAM6_14550 phnC_2; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CLAM6_07510 phnC1; phosphonates import ATP-binding protein PhnC 1 K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CLAM6_34760 glnH; amino acid ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein D CLAM6_34750 glnP; glutamine transport system permease protein GlnP K10037 glnP; glutamine transport system permease protein D CLAM6_34740 arginine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_00560 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D CLAM6_00570 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D CLAM6_00580 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D CLAM6_00590 arginine ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_29000 argT; ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D CLAM6_28970 amino acid-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D CLAM6_28990 aotM; arginine/ornithine transporter AotM K10023 aotM; arginine/ornithine transport system permease protein D CLAM6_28980 histidine/lysine/arginine/ornithine ABC transporter permease HisQ K10024 aotQ; arginine/ornithine transport system permease protein D CLAM6_28960 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_19320 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLAM6_30350 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLAM6_19310 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CLAM6_30340 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D CLAM6_19300 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D CLAM6_30330 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D CLAM6_19290 braF; high-affinity branched-chain amino acid transport ATP-binding protein BraF K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLAM6_30370 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLAM6_19280 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLAM6_30360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLAM6_24250 metQ; lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D CLAM6_24240 metI; D-methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D CLAM6_24230 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D CLAM6_22450 urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D CLAM6_22440 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein D CLAM6_22430 ABC transporter permease K11961 urtC; urea transport system permease protein D CLAM6_22420 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D CLAM6_22410 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D CLAM6_02450 ABC transporter ATP-binding protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_10870 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D CLAM6_10880 ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D CLAM6_10890 arginine ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D CLAM6_16180 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CLAM6_28380 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CLAM6_02460 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CLAM6_02470 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLAM6_02480 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLAM6_16190 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLAM6_16200 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLAM6_28390 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLAM6_28400 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLAM6_28370 histidine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_16210 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CLAM6_32050 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLAM6_32060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLAM6_32070 oppB; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D CLAM6_32080 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D CLAM6_32090 oppD; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CLAM6_15140 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CLAM6_17160 dppA; cytochrome c K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CLAM6_13430 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CLAM6_13410 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CLAM6_15150 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CLAM6_17150 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CLAM6_15160 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CLAM6_17140 dppC; ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CLAM6_13400 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CLAM6_15170 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CLAM6_17130 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CLAM6_13390 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CLAM6_17120 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D CLAM6_15650 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D CLAM6_15640 ABC transporter permease K13894 yejB; microcin C transport system permease protein D CLAM6_15630 ABC transporter permease K13895 yejE; microcin C transport system permease protein D CLAM6_15620 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D CLAM6_04640 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CLAM6_04630 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D CLAM6_04650 iron-hydroxamate transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CLAM6_13610 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CLAM6_01470 siderophore ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D CLAM6_13600 ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D CLAM6_13590 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CLAM6_01480 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CLAM6_01490 cobalamin/Fe3+-siderophore ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CLAM6_13580 iron-dicitrate ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CLAM6_12940 iron ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D CLAM6_07760 btuF; cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CLAM6_22910 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CLAM6_22930 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CLAM6_22920 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CLAM6_22290 znuA2; zinc transporter K09815 znuA; zinc transport system substrate-binding protein D CLAM6_17320 cation ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D CLAM6_17300 membrane protein K09816 znuB; zinc transport system permease protein D CLAM6_22310 znuB2; membrane protein K09816 znuB; zinc transport system permease protein D CLAM6_17310 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CLAM6_22300 znuC2; zinc import ATP-binding protein ZnuC 2 K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CLAM6_21460 transport permease protein K09688 kpsM; capsular polysaccharide transport system permease protein D CLAM6_21440 kpsE; capsule polysaccharide export inner-membrane protein KpsE K10107 kpsE; capsular polysaccharide transport system permease protein D CLAM6_21450 kpsT; ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D CLAM6_02960 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CLAM6_02970 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CLAM6_06900 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CLAM6_09970 hypothetical protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D CLAM6_08710 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D CLAM6_08720 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CLAM6_03760 hypothetical protein K02196 ccmD; heme exporter protein D D CLAM6_03750 ccmC; heme ABC transporter permease K02195 ccmC; heme exporter protein C D CLAM6_03740 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B D CLAM6_03730 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D CLAM6_31940 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CLAM6_31950 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLAM6_28290 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CLAM6_28300 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLAM6_26450 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D CLAM6_26460 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLAM6_10770 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D CLAM6_24600 di- and tricarboxylate transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CLAM6_05870 pmpM; multidrug resistance protein PmpM K26939 norM; MATE family, multidrug efflux pump D CLAM6_17530 norM; MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D CLAM6_30780 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D CLAM6_25140 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D CLAM6_24810 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D CLAM6_19710 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CLAM6_15090 cyanate transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D CLAM6_09420 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D CLAM6_19810 MFS transporter K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D CLAM6_04200 crnA; MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CLAM6_07700 integral membrane signal transducer protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D CLAM6_09670 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CLAM6_32270 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CLAM6_05560 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CLAM6_34240 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CLAM6_19930 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CLAM6_02510 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D CLAM6_22850 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D CLAM6_27980 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CLAM6_27100 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D CLAM6_06850 HPr kinase K08485 ptsO; phosphocarrier protein NPr D CLAM6_28750 fruI; PTS fructose transporter subunit FruI K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D CLAM6_28730 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLAM6_06870 ptsN; nitrogen regulatory protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CLAM6_24280 major intrinsic protein K02440 glpF; glycerol uptake facilitator D CLAM6_24290 major intrinsic protein K02440 glpF; glycerol uptake facilitator D CLAM6_03940 ion transporter K10716 kch; voltage-gated potassium channel D CLAM6_30620 hypothetical protein K10716 kch; voltage-gated potassium channel D CLAM6_00660 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family D CLAM6_14440 ammonium transporter K03320 amt; ammonium transporter, Amt family D CLAM6_13090 gst3; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_20560 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_25710 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_30840 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_00490 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLAM6_07150 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D CLAM6_12080 BAX inhibitor protein K19416 yccA; modulator of FtsH protease D CLAM6_19390 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D CLAM6_28160 potassium transporter KefA K05802 mscK; potassium-dependent mechanosensitive channel D CLAM6_11170 mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel D CLAM6_01450 mechanosensitive channel protein K22044 ybiO; moderate conductance mechanosensitive channel D CLAM6_08530 mechanosensitive ion channel protein MscS K16052 ynaI; MscS family membrane protein D CLAM6_06840 magnesium transporter MgtE K06213 mgtE; magnesium transporter D CLAM6_18260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D CLAM6_18250 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D CLAM6_08750 hypothetical protein K03561 exbB; biopolymer transport protein ExbB D CLAM6_09100 biopolymer transporter TonB K03561 exbB; biopolymer transport protein ExbB D CLAM6_09110 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D CLAM6_08760 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D CLAM6_09120 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D CLAM6_16890 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D CLAM6_16900 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D CLAM6_05050 corA; magnesium transport protein CorA K03284 corA; magnesium transporter D CLAM6_26500 zinc transporter ZntB K16074 zntB; zinc transporter D CLAM6_07830 crcB; putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D CLAM6_13950 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLAM6_32260 corB; membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLAM6_24520 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D CLAM6_25080 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D CLAM6_32110 outer membrane protein K06076 fadL; long-chain fatty acid transport protein D CLAM6_00210 outer membrane protein K05517 tsx; nucleoside-specific channel-forming protein D CLAM6_23560 estA; esterase EstA K12686 apeE; outer membrane lipase/esterase D CLAM6_07780 btuB; TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter D CLAM6_13620 fauA; TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D CLAM6_12930 outer membrane receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D CLAM6_20880 ligand-gated channel K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D CLAM6_23440 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D CLAM6_04700 foxA; ferrioxamine receptor FoxA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLAM6_15300 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLAM6_15570 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLAM6_14160 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLAM6_26610 channel protein TolC K12340 tolC; outer membrane protein D CLAM6_29200 channel protein TolC K12543 lapE; outer membrane protein, adhesin transport system D CLAM6_21840 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CLAM6_23160 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CLAM6_23320 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CLAM6_07680 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein D CLAM6_31530 opr86; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CLAM6_29500 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D CLAM6_30070 lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D CLAM6_32720 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD D CLAM6_01530 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE D CLAM6_17040 hypothetical protein K07278 tamA; translocation and assembly module TamA D CLAM6_17050 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D CLAM6_06910 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D CLAM6_06920 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D CLAM6_30570 lptD; LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D CLAM6_06040 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D CLAM6_06100 ion transporter K06189 corC; hemolysin (HlyC) family protein D CLAM6_18660 hypothetical protein K16235 mmuP; S-methylmethionine transporter D CLAM6_22980 ethanolamine permease K16238 eat; ethanolamine permease D CLAM6_00760 czcD; cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D CLAM6_19610 zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein D CLAM6_00810 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family D CLAM6_09770 gufA; divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family D CLAM6_29020 mexF; resistance-nodulation-cell division (RND) multidrug efflux transporter MexF K18299 mexF; multidrug efflux pump D CLAM6_09520 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CLAM6_30690 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D CLAM6_13780 hypothetical protein K18924 ykkC; paired small multidrug resistance pump D CLAM6_13770 multidrug transporter K18925 ykkD; paired small multidrug resistance pump D CLAM6_18480 ywfM_2; membrane protein K03298 TC.DME; drug/metabolite transporter, DME family D CLAM6_18470 ywfM_1; membrane protein K03298 TC.DME; drug/metabolite transporter, DME family D CLAM6_20490 multidrug DMT transporter permease K03298 TC.DME; drug/metabolite transporter, DME family D CLAM6_15190 hypothetical protein K11939 rhtA; inner membrane transporter RhtA D CLAM6_12290 rarD; chloramphenicol resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD D CLAM6_32580 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLAM6_07890 UPF0060 membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein D CLAM6_28650 gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D CLAM6_23920 sodium:proton antiporter K07084 yuiF; putative amino acid transporter D CLAM6_20180 putative permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CLAM6_33730 lactate permease K03303 lutP; lactate permease D CLAM6_20500 L-lactate permease K03303 lutP; lactate permease D CLAM6_34210 glycine/betaine ABC transporter K05020 opuD; glycine betaine transporter D CLAM6_34220 glycine/betaine ABC transporter K05020 opuD; glycine betaine transporter D CLAM6_14080 glycine/betaine ABC transporter permease K05020 opuD; glycine betaine transporter D CLAM6_20400 glycine/betaine ABC transporter permease K05020 opuD; glycine betaine transporter D CLAM6_21980 glycine/betaine ABC transporter permease K05020 opuD; glycine betaine transporter D CLAM6_02670 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D CLAM6_16660 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D CLAM6_20380 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D CLAM6_28720 high-affinity choline transporter BetT K02168 betT; choline/glycine/proline betaine transport protein D CLAM6_16670 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D CLAM6_20390 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D CLAM6_06950 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter D CLAM6_11190 putP_1; sodium:proline symporter K11928 putP; sodium/proline symporter D CLAM6_15340 putP_3; sodium:proline symporter K11928 putP; sodium/proline symporter D CLAM6_29770 cation acetate symporter K14393 actP; cation/acetate symporter D CLAM6_24610 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CLAM6_30660 nhaB; Na(+)/H(+) antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D CLAM6_04550 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D CLAM6_21210 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D CLAM6_28420 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D CLAM6_15770 tetracycline efflux Na+/H+ antiporter family transporter Tet(35) K18218 tet35; tetracycline resistance efflux pump D CLAM6_12050 nhaP2; K(+)/H(+) antiporter NhaP2 K11105 cvrA; potassium/hydrogen antiporter D CLAM6_33900 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D CLAM6_11950 kefB; glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D CLAM6_10910 potassium transporter Kef K03455 KEA1_2_3; K+:H+ antiporter D CLAM6_24440 ktrB; ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein D CLAM6_27350 Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D CLAM6_29680 trkH; Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D CLAM6_29670 trkA_2; Trk system potassium transport protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D CLAM6_24430 trkA_1; potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D CLAM6_18510 codB; cytosine permease K10974 codB; cytosine permease D CLAM6_24120 uracil permease K02824 uraA; uracil permease D CLAM6_16060 transporter K16345 xanP; xanthine permease XanP D CLAM6_10600 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CLAM6_24210 adenine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CLAM6_34790 chloride channel protein K03281 clcA; chloride channel protein, CIC family D CLAM6_19800 chrA; chromate transporter K07240 chrA; chromate transporter D CLAM6_02100 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D CLAM6_18990 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D CLAM6_20670 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D CLAM6_27590 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D CLAM6_04920 mntH; divalent metal cation transporter MntH K03322 mntH; manganese transport protein D CLAM6_27020 dctP_4; C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP D CLAM6_27010 dctQ_2; C4-dicarboxylate ABC transporter permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D CLAM6_17800 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_27000 dctM; C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_01230 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_14680 membrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_25320 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CLAM6_14770 transporter K21393 yiaN; TRAP-type transport system large permease protein D CLAM6_22100 dehydroascorbate transporter K21393 yiaN; TRAP-type transport system large permease protein D CLAM6_17810 C4-dicarboxylate ABC transporter permease K21394 yiaM; TRAP-type transport system small permease protein D CLAM6_20780 hypothetical protein K21394 yiaM; TRAP-type transport system small permease protein D CLAM6_14750 hypothetical protein K21395 yiaO; TRAP-type transport system periplasmic protein D CLAM6_17820 C4-dicarboxylate ABC transporter K21395 yiaO; TRAP-type transport system periplasmic protein D CLAM6_22060 hypothetical protein K21395 yiaO; TRAP-type transport system periplasmic protein D CLAM6_22080 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D CLAM6_22110 hypothetical protein K21395 yiaO; TRAP-type transport system periplasmic protein D CLAM6_20770 C4-dicarboxylate ABC transporter K21395 yiaO; TRAP-type transport system periplasmic protein D CLAM6_25470 hypothetical protein K21395 yiaO; TRAP-type transport system periplasmic protein D CLAM6_25540 dctP_3; Taurine transporter periplasmatic component K21395 yiaO; TRAP-type transport system periplasmic protein D CLAM6_09540 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CLAM6_15360 arsB2; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein D CLAM6_03430 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D CLAM6_03420 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D CLAM6_03410 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D CLAM6_03400 monovalent cation/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D CLAM6_03390 monovalent cation/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D CLAM6_03380 monovalent cation/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D CLAM6_32950 murJ; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CLAM6_01090 hypothetical protein K13936 mdcF; malonate transporter and related proteins D CLAM6_04560 hypothetical protein K24180 mleP; malate permease and related proteins D CLAM6_09960 membrane protein K24180 mleP; malate permease and related proteins D CLAM6_33840 hypothetical protein K24180 mleP; malate permease and related proteins D CLAM6_24660 transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D CLAM6_08200 threonine transporter RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein D CLAM6_11390 lysine transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein D CLAM6_29290 amino acid efflux permease RhtB family protein K05835 rhtC; threonine efflux protein D CLAM6_16530 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D CLAM6_16520 branched-chain amino acid transporter AzlD K26606 azlD; branched chain amino acid efflux pump D CLAM6_11240 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D CLAM6_13970 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D CLAM6_20690 C4-dicarboxylate ABC transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D CLAM6_20850 C4-dicarboxylate ABC transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D CLAM6_11250 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D CLAM6_20700 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D CLAM6_11280 tricarboxylic transport membrane protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_20710 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_11260 C4-dicarboxylate ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_13980 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_20830 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CLAM6_30100 AI-2E family transporter K03548 perM; putative permease D CLAM6_15790 yhhQ; hypothetical protein K09125 yhhQ; queuosine precursor transporter D CLAM6_07290 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CLAM6_15250 mntP; putative manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein D CLAM6_02530 membrane protein K07243 FTR; high-affinity iron transporter D CLAM6_02550 membrane protein K07230 p19; periplasmic iron binding protein D CLAM6_02730 hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein D CLAM6_00380 tonB3; transporter TonB K03832 tonB; periplasmic protein TonB D CLAM6_09130 hypothetical protein K03832 tonB; periplasmic protein TonB D CLAM6_16930 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CLAM6_16910 hypothetical protein K03646 tolA; colicin import membrane protein D CLAM6_16920 tolB; protein TolB K03641 tolB; TolB protein D CLAM6_30890 oadB; putative oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CLAM6_30900 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D CLAM6_30910 hypothetical protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D CLAM6_22860 secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D CLAM6_02500 hemolysin secretion protein D K03543 emrA; membrane fusion protein, multidrug efflux system D CLAM6_29210 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D CLAM6_29010 mexE; MexE family multidrug efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D CLAM6_09530 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLAM6_21830 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_23150 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_23310 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLAM6_15180 tspO; tryptophan-rich sensory protein K05770 TSPO; translocator protein D CLAM6_02800 hypothetical protein K16347 ecnA; entericidin A D CLAM6_02810 hypothetical protein K16348 ecnB; entericidin B D CLAM6_03780 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D CLAM6_15850 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:cobe02044] D CLAM6_26610 channel protein TolC K12340 tolC; outer membrane protein D CLAM6_29220 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D CLAM6_29210 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D CLAM6_29200 channel protein TolC K12543 lapE; outer membrane protein, adhesin transport system D CLAM6_07440 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CLAM6_07470 pilA; fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D CLAM6_07460 pilB; type 4 fimbrial assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB D CLAM6_07450 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D CLAM6_32820 pilE_2; type IV minor pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D CLAM6_32760 pilE_1; type IV minor pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D CLAM6_32890 pilus biosynthesis protein K02655 pilE; type IV pilus assembly protein PilE D CLAM6_29450 hypothetical protein K02656 pilF; type IV pilus assembly protein PilF D CLAM6_31120 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D CLAM6_31110 pilN; fimbrial protein K02663 pilN; type IV pilus assembly protein PilN D CLAM6_31100 pilO; type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D CLAM6_31090 pilP; pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D CLAM6_31080 pilQ; fimbrial assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D CLAM6_01990 pilT; twitching mobility protein K02669 pilT; twitching motility protein PilT D CLAM6_02000 pilU; twitching motility protein PilU K02670 pilU; twitching motility protein PilU D CLAM6_32800 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D CLAM6_32870 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D CLAM6_32860 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D CLAM6_32850 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D CLAM6_32840 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D CLAM6_08990 pilZ; type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D CLAM6_32810 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D CLAM6_10150 hypothetical protein K08086 fimV; pilus assembly protein FimV D CLAM6_01960 hypothetical protein K02221 yggT; YggT family protein D CLAM6_07730 hypothetical protein K02237 comEA; competence protein ComEA D CLAM6_08740 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D CLAM6_18160 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLAM6_18170 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CLAM6_17870 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D CLAM6_17890 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CLAM6_17900 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLAM6_17950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLAM6_17960 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D CLAM6_17970 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLAM6_17980 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLAM6_17990 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CLAM6_32180 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CLAM6_23560 estA; esterase EstA K12686 apeE; outer membrane lipase/esterase D CLAM6_34890 hypothetical protein K04337 csgE; curli production assembly/transport component CsgE D CLAM6_34880 csgF; curli production assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF D CLAM6_34870 csgG; curli production assembly protein CsgG K06214 csgG; curli production assembly/transport component CsgG D CLAM6_07390 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLAM6_00350 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CLAM6_29350 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CLAM6_33660 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CLAM6_29360 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CLAM6_01710 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CLAM6_33330 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CLAM6_32240 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLAM6_31960 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D CLAM6_29340 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CLAM6_35000 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLAM6_31270 tatE; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D CLAM6_31280 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D CLAM6_31290 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:cobe02042] D CLAM6_13950 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLAM6_32260 corB; membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLAM6_00510 yplQ; hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:cobe02022] D CLAM6_34410 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLAM6_34400 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CLAM6_03650 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CLAM6_03640 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D CLAM6_28680 two-component sensor histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CLAM6_28690 DNA-binding response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D CLAM6_19510 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CLAM6_19520 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CLAM6_28120 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D CLAM6_03560 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D CLAM6_15450 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D CLAM6_13810 hypothetical protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D CLAM6_09320 gacS; histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CLAM6_25800 gacA; response regulator GacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CLAM6_03870 two-component system sensor histidine kinase DcuS K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3] D CLAM6_03880 malR; transcriptional regulatory protein MalR K11615 malR; two-component system, CitB family, response regulator MalR D CLAM6_34040 ntrB; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CLAM6_34030 ntrC; sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D CLAM6_03990 sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CLAM6_04010 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D CLAM6_33750 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D CLAM6_02700 dctB; two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D CLAM6_33760 hypothetical protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D CLAM6_02710 dctD; C4-dicarboxylate transport transcriptional regulatory protein DctD K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D CLAM6_24080 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D CLAM6_18240 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLAM6_18190 cheY; two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLAM6_18200 cheB1; chemotaxis response regulator protein-glutamate methylesterase 1 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLAM6_02240 hypothetical protein K10912 luxO; two-component system, repressor protein LuxO D CLAM6_19480 roxS; two-component sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D CLAM6_19490 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA D CLAM6_04910 hypothetical protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D CLAM6_04220 nitrate transporter K22067 nasS; two-component system, oxyanion-binding sensor D CLAM6_04210 nasT; histidine kinase K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:cobe02035] D CLAM6_18240 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLAM6_18230 cheW-2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLAM6_18210 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLAM6_18200 cheB1; chemotaxis response regulator protein-glutamate methylesterase 1 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLAM6_18190 cheY; two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLAM6_18180 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D CLAM6_00610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_13500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_15870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLAM6_18220 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D CLAM6_17890 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CLAM6_17900 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLAM6_17910 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D CLAM6_17960 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D CLAM6_17970 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLAM6_17980 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLAM6_17990 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CLAM6_18160 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLAM6_18170 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CLAM6_17880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLAM6_17940 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLAM6_17950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLAM6_17870 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D CLAM6_18030 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D CLAM6_18040 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D CLAM6_17930 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CLAM6_17860 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D CLAM6_17920 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D CLAM6_18100 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CLAM6_18090 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CLAM6_18080 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CLAM6_18060 flagellar basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D CLAM6_18050 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CLAM6_18020 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CLAM6_18070 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CLAM6_18010 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1 D CLAM6_18000 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D CLAM6_18140 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D CLAM6_17850 flaA; flagellin K02406 fliC; flagellin D CLAM6_18320 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D CLAM6_18310 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CLAM6_18280 hypothetical protein K02403 flhD; flagellar transcriptional activator FlhD D CLAM6_18270 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CLAM6_17840 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CLAM6_18260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D CLAM6_18250 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D CLAM6_18130 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D CLAM6_01990 pilT; twitching mobility protein K02669 pilT; twitching motility protein PilT D CLAM6_02000 pilU; twitching motility protein PilU K02670 pilU; twitching motility protein PilU D CLAM6_07470 pilA; fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D CLAM6_07460 pilB; type 4 fimbrial assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB D CLAM6_07450 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D CLAM6_07440 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CLAM6_29450 hypothetical protein K02656 pilF; type IV pilus assembly protein PilF D CLAM6_31080 pilQ; fimbrial assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D CLAM6_31090 pilP; pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D CLAM6_31100 pilO; type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D CLAM6_31110 pilN; fimbrial protein K02663 pilN; type IV pilus assembly protein PilN D CLAM6_31120 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D CLAM6_08990 pilZ; type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D CLAM6_32800 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D CLAM6_32870 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D CLAM6_32860 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D CLAM6_32850 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D CLAM6_32840 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D CLAM6_32820 pilE_2; type IV minor pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D CLAM6_32760 pilE_1; type IV minor pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D CLAM6_32890 pilus biosynthesis protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cobe04812] D CLAM6_06740 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLAM6_07350 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLAM6_07340 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D CLAM6_32350 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CLAM6_32340 minD; site-determining protein K03609 minD; septum site-determining protein MinD D CLAM6_32330 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D CLAM6_34710 soj; chromosome partitioning protein Soj K03496 parA; chromosome partitioning protein D CLAM6_34700 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cobe04147] D CLAM6_09860 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D CLAM6_31010 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLAM6_08570 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLAM6_26930 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLAM6_33950 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLAM6_08450 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLAM6_04340 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLAM6_22590 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLAM6_31720 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CLAM6_27220 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLAM6_01570 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLAM6_10480 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_26970 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLAM6_04030 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CLAM6_33550 tufA; elongation factor Tu K02358 tuf; elongation factor Tu D CLAM6_03510 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CLAM6_11380 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CLAM6_05490 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_16680 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLAM6_01790 phbA-1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_05610 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLAM6_29910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CLAM6_24200 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CLAM6_01390 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLAM6_25730 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLAM6_04260 dht; D-hydantoinase/dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CLAM6_24300 glpK1; glycerol kinase 1 K00864 glpK; glycerol kinase [EC:2.7.1.30] D CLAM6_34060 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_06660 spuI; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_14370 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLAM6_31310 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CLAM6_24650 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D CLAM6_24750 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D CLAM6_23610 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CLAM6_00450 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLAM6_08050 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLAM6_05190 lpdG; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_11630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLAM6_09080 etfA-2; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D CLAM6_07540 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CLAM6_01700 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLAM6_28930 blc; hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:cobe02048] D CLAM6_12440 type I restriction-modification system, restriction (R) subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D CLAM6_12470 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CLAM6_12750 putative kinase Y4mE K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CLAM6_18490 higA-1; antitoxin HigA-1 K21498 higA-1; antitoxin HigA-1 D CLAM6_07350 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLAM6_06740 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLAM6_10510 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLAM6_10500 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLAM6_05100 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLAM6_24380 hypothetical protein K09159 cptB; antitoxin CptB D CLAM6_29410 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cobe01504] D CLAM6_15770 tetracycline efflux Na+/H+ antiporter family transporter Tet(35) K18218 tet35; tetracycline resistance efflux pump D CLAM6_14920 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D CLAM6_14780 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CLAM6_09530 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLAM6_09520 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CLAM6_29010 mexE; MexE family multidrug efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D CLAM6_29020 mexF; resistance-nodulation-cell division (RND) multidrug efflux transporter MexF K18299 mexF; multidrug efflux pump D CLAM6_26610 channel protein TolC K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cobe00537] D CLAM6_23610 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CLAM6_04340 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLAM6_22590 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cobe03100] D CLAM6_t00220 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLAM6_t00190 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLAM6_t00620 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLAM6_t00460 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CLAM6_t00450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLAM6_t00210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLAM6_t00140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLAM6_t00590 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLAM6_t00640 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLAM6_t00710 tRNA-Trp K14235 tRNA-Trp; tRNA Trp # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CLAM6_20260 lcdH; L-carnitine dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D CLAM6_15020 hisD_2; histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D CLAM6_19960 dkgB; 2,5-diketo-D-gluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D CLAM6_20190 hypothetical protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410] D CLAM6_20230 3-hydroxyisobutyrate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D CLAM6_11520 glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CLAM6_18440 hypothetical protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14] D CLAM6_34100 calB; putative coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D CLAM6_19820 gapA; glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D CLAM6_03170 fadH1; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D CLAM6_29070 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D CLAM6_29060 aldehyde dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D CLAM6_15890 N-methylproline demethylase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-] D CLAM6_09060 electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D CLAM6_33080 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D CLAM6_02790 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CLAM6_13480 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CLAM6_14620 Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CLAM6_32450 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CLAM6_14230 mdaB; modulator of drug activity B K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D CLAM6_03700 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D CLAM6_17070 msrA_1; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CLAM6_27970 msrA_2; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CLAM6_27180 hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CLAM6_28310 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CLAM6_15260 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D CLAM6_28860 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D CLAM6_04780 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D CLAM6_30090 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CLAM6_34200 ohr; organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D CLAM6_12270 osmC_1; peroxiredoxin OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D CLAM6_13070 osmC_2; osmotically inducible protein C K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D CLAM6_20450 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CLAM6_13460 phosphodiesterase K24290 tmpB; [1-hydroxy-2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.13.11.90] D CLAM6_10440 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CLAM6_14430 hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238] D CLAM6_14410 hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238] D CLAM6_14420 ferredoxin--NADP(+) reductase K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239] D CLAM6_04680 alcA; lysine N6-hydroxylase/L-ornithine N5-oxygenase family protein K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252] D CLAM6_15910 sodN; superoxide dismutase [Ni] K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1] D CLAM6_00640 fpr; ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CLAM6_15380 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CLAM6_16580 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CLAM6_26650 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D CLAM6_24710 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CLAM6_33160 cfaA; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CLAM6_05510 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D CLAM6_00860 lnt_1; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CLAM6_06090 lnt_2; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CLAM6_04180 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D CLAM6_29990 hypothetical protein K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D CLAM6_27710 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D CLAM6_29240 transglutaminase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D CLAM6_27720 ate; putative arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D CLAM6_26360 sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D CLAM6_29690 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D CLAM6_27060 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CLAM6_08640 apbE; FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CLAM6_20220 HPr kinase K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D CLAM6_25120 putative phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D CLAM6_30640 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CLAM6_09900 UPF0061 protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D CLAM6_16730 serine/threonine protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1] D CLAM6_29720 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D CLAM6_21020 formyl-CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D CLAM6_20270 cdhB; carnitine dehydrogenase K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33] D CLAM6_16880 acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CLAM6_27450 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CLAM6_31790 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CLAM6_32470 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CLAM6_03920 phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D CLAM6_09950 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D CLAM6_14880 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D CLAM6_05940 mttC; secretion protein MttC K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CLAM6_09010 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CLAM6_19380 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CLAM6_11990 acyl-CoA esterase K01175 ybfF; esterase [EC:3.1.-.-] D CLAM6_19080 hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170] D CLAM6_29640 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CLAM6_22550 enamine deaminase RidA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CLAM6_21720 gmm; GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D CLAM6_08870 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D CLAM6_29260 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CLAM6_20210 class II aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D CLAM6_10640 nnr; bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CLAM6_20200 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D CLAM6_08180 mpl; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D CLAM6_23690 electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D CLAM6_23680 hypothetical protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D CLAM6_23670 electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D CLAM6_08580 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D CLAM6_08590 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D CLAM6_08600 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CLAM6_08610 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D CLAM6_08620 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D CLAM6_08630 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D CLAM6_00840 heavy metal-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D CLAM6_01890 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D CLAM6_16410 fdhD; sulfurtransferase FdhD K02379 fdhD; FdhD protein D CLAM6_02840 fdhD-1; sulfurtransferase FdhD K02379 fdhD; FdhD protein D CLAM6_31000 fdxA; ferredoxin 1 K05524 fdxA; ferredoxin D CLAM6_23700 hypothetical protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D CLAM6_23710 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D CLAM6_23660 rnfA; electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D CLAM6_09070 etfB; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D CLAM6_34420 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein D CLAM6_02040 VOC family protein K08234 yaeR; glyoxylase I family protein D CLAM6_01980 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CLAM6_24400 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D CLAM6_24410 lapB; lipopolysaccharide assembly protein B K19804 lapB; lipopolysaccharide assembly protein B D CLAM6_05240 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D CLAM6_01430 heme biosynthesis protein HemY K02498 hemY; HemY protein D CLAM6_31250 ubiB; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D CLAM6_31240 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D CLAM6_00680 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D CLAM6_24010 hypothetical protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D CLAM6_12490 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D CLAM6_30040 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D CLAM6_02640 hypothetical protein K15977 K15977; putative oxidoreductase D CLAM6_20440 oxidoreductase K15977 K15977; putative oxidoreductase D CLAM6_30860 GntR family transcriptional regulator K15977 K15977; putative oxidoreductase D CLAM6_11020 carboxylesterase K06999 K06999; phospholipase/carboxylesterase D CLAM6_16450 GCN5 family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CLAM6_03670 cold-shock protein K03704 cspA; cold shock protein D CLAM6_09730 cold-shock protein K03704 cspA; cold shock protein D CLAM6_11830 cold-shock protein K03704 cspA; cold shock protein D CLAM6_31690 hypothetical protein K03704 cspA; cold shock protein D CLAM6_27140 algQ; transcriptional regulatory protein AlgQ K07740 rsd; regulator of sigma D D CLAM6_00650 glnK_1; nitrogen regulatory protein P-II 1 K04752 glnK; nitrogen regulatory protein P-II 2 D CLAM6_00670 glnK_2; nitrogen regulatory protein P-II 1 K04752 glnK; nitrogen regulatory protein P-II 2 D CLAM6_27170 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CLAM6_27750 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CLAM6_24970 tig; trigger factor K03545 tig; trigger factor D CLAM6_22360 hypothetical protein K03187 ureE; urease accessory protein D CLAM6_22350 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein D CLAM6_22340 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D CLAM6_22400 ureD2; urease accessory protein UreD 2 K03190 ureD; urease accessory protein D CLAM6_22330 protein hupE K03192 ureJ; urease accessory protein D CLAM6_01500 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D CLAM6_00700 hypothetical protein K07391 comM; magnesium chelatase family protein D CLAM6_26740 prolyl 4-hydroxylase subunit alpha K07394 K07394; SM-20-related protein D CLAM6_30600 hypothetical protein K07397 yhfA; putative redox protein D CLAM6_19340 peroxiredoxin K07397 yhfA; putative redox protein D CLAM6_17510 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D CLAM6_26510 hypothetical protein K07401 K07401; selenoprotein W-related protein D CLAM6_29050 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D CLAM6_16100 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D CLAM6_02130 hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D CLAM6_31850 UPF0758 protein K03630 radC; DNA repair protein RadC D CLAM6_02600 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D CLAM6_07190 UPF0102 protein K07460 yraN; putative endonuclease D CLAM6_06200 hypothetical protein K07461 K07461; putative endonuclease D CLAM6_29620 hypothetical protein K04096 smf; DNA processing protein D CLAM6_27670 recombinase RarA K07478 ycaJ; putative ATPase D CLAM6_00740 transposase K07483 K07483; transposase D CLAM6_00890 transposase K07483 K07483; transposase D CLAM6_00930 transposase K07483 K07483; transposase D CLAM6_12590 transposase K07483 K07483; transposase D CLAM6_13020 transposase K07483 K07483; transposase D CLAM6_14820 transposase K07483 K07483; transposase D CLAM6_17630 transposase K07483 K07483; transposase D CLAM6_21160 transposase K07483 K07483; transposase D CLAM6_21610 transposase K07483 K07483; transposase D CLAM6_21730 transposase K07483 K07483; transposase D CLAM6_22670 transposase K07483 K07483; transposase D CLAM6_25860 transposase K07483 K07483; transposase D CLAM6_25990 hypothetical protein K07483 K07483; transposase D CLAM6_21170 transposase K07484 K07484; transposase D CLAM6_21180 transposase K07484 K07484; transposase D CLAM6_18730 hypothetical protein K07485 K07485; transposase D CLAM6_25920 hypothetical protein K07485 K07485; transposase D CLAM6_00730 transposase K07497 K07497; putative transposase D CLAM6_00880 transposase K07497 K07497; putative transposase D CLAM6_00950 transposase K07497 K07497; putative transposase D CLAM6_12600 transposase K07497 K07497; putative transposase D CLAM6_13010 transposase K07497 K07497; putative transposase D CLAM6_13130 tnpA; transposase K07497 K07497; putative transposase D CLAM6_14830 transposase K07497 K07497; putative transposase D CLAM6_21150 transposase K07497 K07497; putative transposase D CLAM6_25870 transposase K07497 K07497; putative transposase D CLAM6_25980 integrase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CLAM6_28090 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC D CLAM6_19470 cry; cryptochrome DASH K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CLAM6_34010 yeaV; transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D CLAM6_04420 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D CLAM6_04460 betT; BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D CLAM6_20990 hypothetical protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family D CLAM6_20970 hypothetical protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family D CLAM6_05010 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CLAM6_03970 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D CLAM6_05370 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CLAM6_05380 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CLAM6_20640 sodium:pantothenate symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CLAM6_13520 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CLAM6_14330 putP_2; sodium:proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CLAM6_18860 sodium:solute symport protein K03307 TC.SSS; solute:Na+ symporter, SSS family D CLAM6_19910 panF; pantothenate permease K03307 TC.SSS; solute:Na+ symporter, SSS family D CLAM6_33790 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CLAM6_34540 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CLAM6_24420 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CLAM6_32510 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CLAM6_11810 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CLAM6_15780 agcS-2; sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CLAM6_32440 alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CLAM6_10940 braB; branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CLAM6_29700 sodium transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CLAM6_33870 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D CLAM6_04280 transporter K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D CLAM6_00200 nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family D CLAM6_07790 nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D CLAM6_03910 putative intracellular septation protein A K06190 ispZ; intracellular septation protein D CLAM6_03220 SpoVR family protein K06415 spoVR; stage V sporulation protein R D CLAM6_00320 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D CLAM6_27030 hypothetical protein K03607 proQ; ProP effector D CLAM6_05960 universal stress protein K06149 uspA; universal stress protein A D CLAM6_09560 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein D CLAM6_34070 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein D CLAM6_06120 ATP-binding protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CLAM6_17220 hypothetical protein K07175 phoH2; PhoH-like ATPase D CLAM6_03200 PrkA family serine protein kinase K07180 prkA; serine protein kinase D CLAM6_29760 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein D CLAM6_06140 hypothetical protein K07184 ygiM; SH3 domain protein D CLAM6_23790 UPF0234 protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D CLAM6_27680 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D CLAM6_06490 lolB; outer-membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D CLAM6_05520 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA D CLAM6_27880 membrane protein K06077 slyB; outer membrane lipoprotein SlyB D CLAM6_31520 hypothetical protein K06142 hlpA; outer membrane protein D CLAM6_26630 hypothetical protein K06194 nlpD; lipoprotein NlpD D CLAM6_21550 wcbO; capsular polysaccharide export protein K07265 kpsS; capsular polysaccharide export protein D CLAM6_21540 lipA_2; capsule polysaccharide modification protein LipA K07266 kpsC; capsular polysaccharide export protein D CLAM6_11070 outer membrane protein W K07275 ompW; outer membrane protein D CLAM6_11080 outer membrane protein K07275 ompW; outer membrane protein D CLAM6_31140 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D CLAM6_06160 hypothetical protein K07286 yajG; uncharacterized lipoprotein D CLAM6_02210 cell envelope biogenesis protein AsmA K07289 asmA; AsmA protein D CLAM6_03770 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D CLAM6_03800 cytochrome c biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D CLAM6_03810 c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D CLAM6_29460 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D CLAM6_34430 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D CLAM6_03000 hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin D CLAM6_30530 apaG; protein ApaG K06195 apaG; ApaG protein D CLAM6_16420 DNA-binding protein K07219 K07219; putative molybdopterin biosynthesis protein D CLAM6_12650 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D CLAM6_15610 peptidase K07231 K07231; putative iron-regulated protein D CLAM6_15480 hypothetical protein K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D CLAM6_10210 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D CLAM6_09880 hypothetical protein K03796 bax; Bax protein D CLAM6_09500 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B D CLAM6_10020 esterase K07001 K07001; NTE family protein D CLAM6_01160 patatin K07001 K07001; NTE family protein D CLAM6_34770 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D CLAM6_10760 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D CLAM6_10780 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D CLAM6_30880 integral membrane protein K07038 K07038; inner membrane protein D CLAM6_16590 UPF0761 membrane protein K07058 K07058; membrane protein D CLAM6_12280 hypothetical protein K07058 K07058; membrane protein D CLAM6_27200 hypothetical protein K07113 fxsA; UPF0716 protein FxsA D CLAM6_17250 hypothetical protein K02426 sufE; cysteine desulfuration protein SufE D CLAM6_02830 UPF0176 protein K07146 K07146; UPF0176 protein D CLAM6_27810 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D CLAM6_11550 hypothetical protein K11477 glcG; glc operon protein GlcG D CLAM6_15370 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D CLAM6_12170 ferric iron reductase K13255 fhuF; ferric iron reductase protein FhuF D CLAM6_05800 hypothetical protein K03744 lemA; LemA protein D CLAM6_31700 hypothetical protein K03745 slyX; SlyX protein D CLAM6_04970 hypothetical protein K05805 creA; CreA protein D CLAM6_29830 hypothetical protein K02742 sprT; SprT protein D CLAM6_10200 hypothetical protein K03749 dedD; DedD protein D CLAM6_10820 hypothetical protein K03748 sanA; SanA protein D CLAM6_09510 hypothetical protein K03808 pqiA; paraquat-inducible protein A D CLAM6_26640 DUF368 domain-containing protein K08974 K08974; putative membrane protein D CLAM6_05320 hypothetical protein K08990 ycjF; putative membrane protein D CLAM6_17060 UPF0225 protein K09858 K09858; SEC-C motif domain protein D CLAM6_25410 hypothetical protein K06193 phnA; protein PhnA C 99997 Function unknown D CLAM6_03580 hypothetical protein K06867 K06867; uncharacterized protein D CLAM6_20950 hypothetical protein K06867 K06867; uncharacterized protein D CLAM6_05330 hypothetical protein K06918 K06918; uncharacterized protein D CLAM6_29520 hypothetical protein K06923 K06923; uncharacterized protein D CLAM6_25060 hypothetical protein K06938 K06938; uncharacterized protein D CLAM6_24870 UPF0153 protein PA1578.1 K06940 K06940; uncharacterized protein D CLAM6_23370 hypothetical protein K06940 K06940; uncharacterized protein D CLAM6_32740 hypothetical protein K06950 K06950; uncharacterized protein D CLAM6_33140 amine oxidase K06954 K06954; uncharacterized protein D CLAM6_20620 peptidase S15 K06978 K06978; uncharacterized protein D CLAM6_05250 hypothetical protein K06986 K06986; uncharacterized protein D CLAM6_05000 deacylase K06987 K06987; uncharacterized protein D CLAM6_25280 glyoxalase K06991 K06991; uncharacterized protein D CLAM6_10490 hypothetical protein K07000 K07000; uncharacterized protein D CLAM6_20540 hypothetical protein K07006 K07006; uncharacterized protein D CLAM6_17090 yheT; hydrolase K07019 K07019; uncharacterized protein D CLAM6_03160 hypothetical protein K07020 K07020; uncharacterized protein D CLAM6_34830 hypothetical protein K07028 K07028; uncharacterized protein D CLAM6_29840 hypothetical protein K07039 K07039; uncharacterized protein D CLAM6_33810 DNA-binding protein K07070 K07070; uncharacterized protein D CLAM6_33070 sulA; epimerase K07071 K07071; uncharacterized protein D CLAM6_02760 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein D CLAM6_17190 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein D CLAM6_04990 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D CLAM6_05680 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D CLAM6_27070 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D CLAM6_02780 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D CLAM6_15980 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D CLAM6_23200 membrane protein K07090 K07090; uncharacterized protein D CLAM6_31330 dTDP-D-glucose 4,6-dehydratase K07093 K07093; uncharacterized protein D CLAM6_13730 transporter K07112 K07112; uncharacterized protein D CLAM6_13740 hypothetical protein K07112 K07112; uncharacterized protein D CLAM6_31760 membrane protein K07112 K07112; uncharacterized protein D CLAM6_28110 hypothetical protein K07120 K07120; uncharacterized protein D CLAM6_07200 penicillin-binding protein activator K07121 K07121; uncharacterized protein D CLAM6_28810 hypothetical protein K07140 K07140; MOSC domain-containing protein D CLAM6_17280 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D CLAM6_32500 hypothetical protein K09009 K09009; uncharacterized protein D CLAM6_08340 UPF0250 protein K09158 K09158; uncharacterized protein D CLAM6_28050 UPF0260 protein K09160 K09160; uncharacterized protein D CLAM6_33150 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D CLAM6_04790 UPF0178 protein K09768 K09768; uncharacterized protein D CLAM6_03900 yciL; hypothetical protein K09780 K09780; uncharacterized protein D CLAM6_03210 UPF0229 protein K09786 K09786; uncharacterized protein D CLAM6_23760 hypothetical protein K09790 K09790; uncharacterized protein D CLAM6_08790 UPF0434 protein K09791 K09791; uncharacterized protein D CLAM6_13930 hypothetical protein K09794 K09794; uncharacterized protein D CLAM6_19160 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D CLAM6_01520 UPF0125 protein K09801 K09801; uncharacterized protein D CLAM6_07750 hypothetical protein K09807 K09807; uncharacterized protein D CLAM6_08650 hypothetical protein K05952 K05952; uncharacterized protein D CLAM6_23780 GntR family transcriptional regulator K00243 K00243; uncharacterized protein D CLAM6_09490 hypothetical protein K09857 K09857; uncharacterized protein D CLAM6_32590 UPF0246 protein K09861 K09861; uncharacterized protein D CLAM6_07420 hypothetical protein K09862 K09862; uncharacterized protein D CLAM6_02140 hypothetical protein K09891 K09891; uncharacterized protein D CLAM6_00270 hypothetical protein K09895 K09895; uncharacterized protein D CLAM6_28060 YcgL domain-containing protein K09902 K09902; uncharacterized protein D CLAM6_07070 hypothetical protein K09908 K09908; uncharacterized protein D CLAM6_23830 hypothetical protein K09916 K09916; uncharacterized protein D CLAM6_26870 hypothetical protein K09919 K09919; uncharacterized protein D CLAM6_10400 hypothetical protein K09920 K09920; uncharacterized protein D CLAM6_01350 hypothetical protein K09921 K09921; uncharacterized protein D CLAM6_08730 hypothetical protein K09928 K09928; uncharacterized protein D CLAM6_02620 hypothetical protein K09930 K09930; uncharacterized protein D CLAM6_03080 UPF0276 protein K09930 K09930; uncharacterized protein D CLAM6_26800 hypothetical protein K09931 K09931; uncharacterized protein D CLAM6_02090 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D CLAM6_26240 yegP; UPF0339 protein YegP K09946 K09946; uncharacterized protein D CLAM6_15580 hypothetical protein K09947 K09947; uncharacterized protein D CLAM6_16320 hypothetical protein K09948 K09948; uncharacterized protein D CLAM6_15420 hypothetical protein K09954 K09954; uncharacterized protein D CLAM6_20570 hypothetical protein K09958 K09958; uncharacterized protein D CLAM6_13650 urea carboxylase K09967 K09967; uncharacterized protein D CLAM6_13660 urea carboxylase K09967 K09967; uncharacterized protein D CLAM6_15330 hypothetical protein K09967 K09967; uncharacterized protein D CLAM6_10950 hypothetical protein K09977 K09977; uncharacterized protein D CLAM6_09020 hypothetical protein K09986 K09986; uncharacterized protein D CLAM6_03960 TIGR00153 family protein K07220 K07220; uncharacterized protein D CLAM6_15590 lipoprotein K07338 K07338; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024