+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Coprococcus sp. ART55/1

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D CCU_26820 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C CCU_15500 GTP-binding protein Era K03595 era; GTPase # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C CCU_06960 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C CCU_05940 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D CCU_01820 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CCU_20340 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CCU_24570 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CCU_00700 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CCU_19410 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CCU_01190 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CCU_18640 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] C 23S rRNA modification factors D CCU_15650 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CCU_24670 Uncharacterized conserved protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CCU_24680 Uncharacterized conserved protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CCU_10170 Predicted SAM-dependent methyltransferases K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CCU_20550 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CCU_24580 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CCU_17160 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CCU_19690 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CCU_06340 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] B ribosomal protein modification factors C CCU_11400 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C CCU_25110 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C CCU_00710 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C CCU_26820 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] C CCU_00640 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C CCU_15660 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases B GTPases C CCU_15500 GTP-binding protein Era K03595 era; GTPase C CCU_27370 ribosome-associated GTPase EngA K03977 engA; GTPase C CCU_27440 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A C CCU_18740 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C CCU_17500 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C CCU_18120 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C CCU_24880 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C CCU_19490 Uncharacterized conserved protein K14761 rlbA; ribosome-associated protein C CCU_26640 iojap-related protein K09710 ybeB; ribosome-associated protein C CCU_26240 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor C CCU_26850 Predicted metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024