+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium sp. SCR221107
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cors00010]
D PAB09_03295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_08970 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_05950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAB09_04990 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PAB09_11650 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAB09_07355 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAB09_04645 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAB09_07365 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAB09_07360 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAB09_01740 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAB09_04830 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB09_08600 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB09_12300 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB09_09385 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAB09_09065 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_12330 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAB09_11770 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PAB09_00770 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAB09_05925 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAB09_11775 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PAB09_04705 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAB09_05525 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PAB09_10480 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAB09_07880 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D PAB09_12650 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PAB09_12030 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cors00020]
D PAB09_04215 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PAB09_07190 can; (GenBank) aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PAB09_02895 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAB09_05395 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_00125 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAB09_00120 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAB09_10610 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PAB09_01675 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAB09_01680 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAB09_01670 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAB09_04985 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAB09_09920 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAB09_08290 mqo; (GenBank) malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PAB09_02980 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PAB09_12030 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PAB09_09385 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAB09_09065 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cors00030]
D PAB09_07330 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PAB09_07340 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PAB09_06805 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PAB09_07415 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PAB09_07320 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAB09_07325 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PAB09_09985 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAB09_12355 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PAB09_10480 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAB09_04790 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAB09_11650 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAB09_04990 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PAB09_05950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cors00040]
D PAB09_11915 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAB09_04490 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB09_07415 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PAB09_09765 FGGY family carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:cors00051]
D PAB09_11035 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PAB09_03135 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PAB09_02965 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAB09_03125 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAB09_03105 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAB09_05950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAB09_04990 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PAB09_07995 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PAB09_11650 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAB09_07355 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAB09_09985 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAB09_08000 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PAB09_00985 mannose/fructose/sorbose PTS transporter subunit IIA K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PAB09_00980 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D PAB09_00975 manZ; (GenBank) PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:cors00052]
D PAB09_05525 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PAB09_05545 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAB09_09210 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAB09_05540 galT; (GenBank) galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PAB09_07930 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAB09_09580 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAB09_04490 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB09_10480 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAB09_03295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_08970 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_12200 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PAB09_05950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAB09_02340 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PAB09_05315 GH32 C-terminal domain-containing protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:cors00053]
D PAB09_11915 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAB09_12710 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PAB09_12715 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:cors00500]
D PAB09_02345 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PAB09_02340 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PAB09_05315 GH32 C-terminal domain-containing protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PAB09_04490 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB09_02730 hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PAB09_05330 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PAB09_05825 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PAB09_08595 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PAB09_02305 pulA; (GenBank) type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D PAB09_09635 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PAB09_09660 phosphotransferase K16146 pep2; maltokinase [EC:2.7.1.175]
D PAB09_05830 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D PAB09_05325 glgA; (GenBank) glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D PAB09_08690 glgX; (GenBank) glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D PAB09_10890 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D PAB09_10900 otsB; (GenBank) trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D PAB09_10480 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAB09_03295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_08970 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_11035 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:cors00620]
D PAB09_04705 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAB09_09385 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAB09_09065 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_11770 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PAB09_00770 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAB09_05925 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAB09_11425 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAB09_11430 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAB09_08600 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB09_12300 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB09_02985 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D PAB09_08530 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PAB09_11775 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PAB09_10610 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PAB09_12330 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAB09_10860 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PAB09_03735 FAD-binding and (Fe-S)-binding domain-containing protein K18930 dld; D-lactate dehydrogenase
D PAB09_07620 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PAB09_11875 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PAB09_02980 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PAB09_09920 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAB09_08290 mqo; (GenBank) malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PAB09_04985 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAB09_03950 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB09_07350 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB09_12030 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PAB09_04630 glcB; (GenBank) malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_12335 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cors00630]
D PAB09_04635 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D PAB09_04630 glcB; (GenBank) malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PAB09_09920 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAB09_04215 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PAB09_07190 can; (GenBank) aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PAB09_04705 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_05810 mce; (GenBank) methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAB09_02985 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D PAB09_03020 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAB09_03025 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAB09_03015 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D PAB09_07135 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_07140 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_12305 catalase K03781 katE; catalase [EC:1.11.1.6]
D PAB09_09245 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PAB09_12825 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PAB09_09105 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_09195 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB09_09070 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAB09_09075 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_09080 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PAB09_08565 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PAB09_05395 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:cors00640]
D PAB09_04705 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAB09_11425 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAB09_11430 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_03850 acyl-CoA dehydrogenase family protein K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_02985 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D PAB09_03830 methylmalonyl-CoA carboxytransferase subunit 5S K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D PAB09_03835 acyl-CoA carboxylase subunit beta K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D PAB09_03840 hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D PAB09_03845 biotin/lipoyl-binding protein K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D PAB09_12885 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PAB09_03020 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAB09_03025 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAB09_03015 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D PAB09_05810 mce; (GenBank) methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAB09_07135 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_07140 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_00120 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAB09_00125 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAB09_00440 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PAB09_07190 can; (GenBank) aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PAB09_04635 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D PAB09_12330 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cors00650]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_06425 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAB09_00960 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAB09_07240 enoyl-CoA hydratase-related protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_01675 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAB09_01680 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAB09_01670 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAB09_12885 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PAB09_04340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_08800 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12875 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12890 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_10610 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PAB09_01010 3-oxoacid CoA-transferase K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D PAB09_07255 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PAB09_06030 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_12840 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_12870 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_06035 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAB09_05320 budA; (GenBank) acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:cors00660]
D PAB09_06030 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_12840 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_12870 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_06035 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAB09_05320 budA; (GenBank) acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D PAB09_00120 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAB09_00125 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAB09_06235 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PAB09_06240 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAB09_06070 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cors00562]
D PAB09_07875 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAB09_08630 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAB09_11685 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PAB09_07720 CDP-alcohol phosphatidyltransferase family protein K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D PAB09_00440 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PAB09_07355 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00566 Sulfoquinovose metabolism
D PAB09_09920 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cors00190]
D PAB09_06830 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PAB09_01675 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAB09_01680 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAB09_01670 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAB09_08990 ubiquinol-cytochrome c reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PAB09_08985 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D PAB09_08995 cytochrome c K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D PAB09_07315 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAB09_09005 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D PAB09_09000 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PAB09_10415 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PAB09_09010 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PAB09_07310 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAB09_13060 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PAB09_13065 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PAB09_05775 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PAB09_05785 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PAB09_05780 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PAB09_05770 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PAB09_05790 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PAB09_05755 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PAB09_05765 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PAB09_05760 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PAB09_11190 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PAB09_04595 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAB09_11260 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cors00710]
D PAB09_07360 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAB09_04645 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAB09_07365 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAB09_11650 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAB09_04990 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PAB09_07320 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAB09_09985 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAB09_07355 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAB09_07415 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PAB09_07325 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PAB09_03950 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB09_07350 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB09_09920 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cors00720]
D PAB09_03950 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB09_07350 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB09_02980 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PAB09_09920 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAB09_04985 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAB09_01675 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAB09_01680 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAB09_01670 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAB09_00125 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAB09_00120 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_02895 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAB09_07190 can; (GenBank) aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PAB09_05810 mce; (GenBank) methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAB09_07135 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_07140 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_07015 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PAB09_02870 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PAB09_08920 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PAB09_11430 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAB09_11425 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAB09_04705 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:cors00680]
D PAB09_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB09_04830 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB09_03950 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB09_07350 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB09_09920 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAB09_11650 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAB09_04990 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PAB09_05950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAB09_11425 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAB09_11430 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAB09_04705 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAB09_01740 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAB09_06060 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAB09_04210 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAB09_10410 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cors00910]
D PAB09_04750 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PAB09_08560 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAB09_09105 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_09195 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_09135 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAB09_09140 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PAB09_10965 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cors00920]
D PAB09_00035 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D PAB09_00760 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D PAB09_00030 ABC transporter permease K15552 tauC; taurine transport system permease protein
D PAB09_00755 ABC transporter permease K15552 tauC; taurine transport system permease protein
D PAB09_00765 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PAB09_00040 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PAB09_00025 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PAB09_00055 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PAB09_03350 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PAB09_11840 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PAB09_11845 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PAB09_04295 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PAB09_08210 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D PAB09_11850 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PAB09_11860 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D PAB09_05045 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D PAB09_06185 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D PAB09_02990 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_05590 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_11675 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_10545 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PAB09_10540 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PAB09_02885 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PAB09_10015 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cors00061]
D PAB09_02985 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D PAB09_03250 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D PAB09_10320 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D PAB09_03860 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB09_01730 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_09630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cors00071]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_00960 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAB09_07240 enoyl-CoA hydratase-related protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAB09_03850 acyl-CoA dehydrogenase family protein K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6]
D PAB09_01000 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAB09_04715 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAB09_01730 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_09630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_11770 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:cors00074]
D PAB09_02985 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D PAB09_10310 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PAB09_08195 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D PAB09_03250 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D PAB09_10320 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D PAB09_12095 acyl-CoA carboxylase subunit beta K27093 accD4; long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.- 2.1.3.-]
D PAB09_03020 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAB09_03025 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAB09_03015 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D PAB09_12125 FadD32-like long-chain-fatty-acid--AMP ligase K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-]
D PAB09_12100 pks13; (GenBank) polyketide synthase Pks13 K12437 pks13; polyketide synthase 13
D PAB09_10135 cmrA; (GenBank) mycolate reductase K27306 cmrA; mycolic acid reductase
D PAB09_12150 alpha/beta hydrolase family protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cors00561]
D PAB09_08565 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PAB09_00770 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAB09_05925 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAB09_12210 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PAB09_06585 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D PAB09_08965 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAB09_12150 alpha/beta hydrolase family protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
C 00564 Glycerophospholipid metabolism [PATH:cors00564]
D PAB09_06255 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PAB09_08965 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAB09_12295 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PAB09_02755 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D PAB09_02750 eutC; (GenBank) ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D PAB09_08350 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PAB09_08105 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PAB09_11360 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:cors00592]
D PAB09_03850 acyl-CoA dehydrogenase family protein K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:cors01040]
D PAB09_03210 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D PAB09_03205 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D PAB09_03850 acyl-CoA dehydrogenase family protein K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6]
D PAB09_07690 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cors00230]
D PAB09_10480 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAB09_04790 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAB09_10690 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PAB09_10790 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PAB09_04380 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PAB09_11465 ATP-grasp domain-containing protein K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PAB09_00220 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PAB09_10685 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PAB09_03040 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PAB09_03045 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PAB09_10760 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PAB09_10770 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PAB09_04385 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAB09_07645 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PAB09_00675 bifunctional UDP-sugar hydrolase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PAB09_08825 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PAB09_05430 nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D PAB09_11175 hpt; (GenBank) hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PAB09_02695 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAB09_02700 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAB09_09880 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAB09_10345 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PAB09_02720 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAB09_07200 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAB09_10975 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7]
D PAB09_07455 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PAB09_10430 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAB09_10420 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PAB09_02125 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PAB09_09520 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PAB09_07640 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PAB09_01760 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PAB09_04845 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PAB09_01540 HAMP domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PAB09_11470 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PAB09_02935 hypothetical protein K01488 add; adenosine deaminase [EC:3.5.4.4]
D PAB09_00545 amn; (GenBank) AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PAB09_02470 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAB09_07725 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D PAB09_11840 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PAB09_11845 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PAB09_00945 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:cors00240]
D PAB09_07470 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAB09_07475 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAB09_07485 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PAB09_07480 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PAB09_07095 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PAB09_11665 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PAB09_07465 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PAB09_08360 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PAB09_09880 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAB09_03000 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PAB09_06620 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PAB09_06685 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PAB09_00675 bifunctional UDP-sugar hydrolase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PAB09_02955 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PAB09_07490 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PAB09_00505 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PAB09_02125 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PAB09_11920 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PAB09_10430 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAB09_10420 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PAB09_03155 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PAB09_07860 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PAB09_04290 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PAB09_08150 thyX; (GenBank) FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D PAB09_12845 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PAB09_12850 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cors00250]
D PAB09_06205 FAD-dependent oxidoreductase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PAB09_08770 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PAB09_09015 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PAB09_11910 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PAB09_07020 aspA; (GenBank) aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PAB09_06540 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAB09_06545 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAB09_11470 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PAB09_10770 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PAB09_07485 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PAB09_12885 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PAB09_04340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_08800 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12875 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12890 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_09135 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAB09_09140 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PAB09_08560 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAB09_11815 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAB09_09105 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_09195 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_07470 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAB09_07475 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAB09_09445 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB09_10690 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cors00260]
D PAB09_12320 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB09_12315 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAB09_05700 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAB09_05705 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PAB09_09175 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAB09_00480 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PAB09_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB09_08565 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PAB09_01740 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAB09_06060 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAB09_04210 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAB09_10410 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PAB09_09070 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAB09_09075 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_09080 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PAB09_00720 solA; (GenBank) N-methyl-L-tryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D PAB09_04125 solA; (GenBank) N-methyl-L-tryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D PAB09_07605 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PAB09_08730 ilvA; (GenBank) threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PAB09_06220 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PAB09_13055 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PAB09_13025 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAB09_13050 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cors00270]
D PAB09_10545 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PAB09_10540 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PAB09_09685 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PAB09_07060 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PAB09_07440 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PAB09_11885 nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PAB09_08825 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PAB09_03150 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAB09_12320 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB09_12315 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAB09_05700 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAB09_05705 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PAB09_02885 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PAB09_10015 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PAB09_02890 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PAB09_09050 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAB09_12330 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAB09_02990 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_05590 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_11675 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_09920 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAB09_07605 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PAB09_06060 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAB09_04210 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cors00280]
D PAB09_09050 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_02985 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D PAB09_03020 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAB09_03025 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAB09_03015 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D PAB09_05810 mce; (GenBank) methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAB09_07135 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_07140 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_00445 mmsB; (GenBank) 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PAB09_01250 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PAB09_00440 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PAB09_12885 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PAB09_01010 3-oxoacid CoA-transferase K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D PAB09_07255 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cors00290]
D PAB09_08730 ilvA; (GenBank) threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PAB09_06235 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PAB09_06240 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAB09_06070 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PAB09_06030 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_12840 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_12870 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_06035 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAB09_06040 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PAB09_06015 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PAB09_09050 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAB09_11910 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PAB09_12335 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cors00300]
D PAB09_05700 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAB09_12320 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB09_12315 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAB09_03290 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAB09_08135 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAB09_08155 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PAB09_05265 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PAB09_05275 DapH/DapD/GlmU-related protein K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PAB09_06525 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PAB09_04095 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D PAB09_05280 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAB09_08030 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PAB09_05695 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PAB09_12825 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PAB09_08875 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAB09_08870 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cors00310]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_01000 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAB09_04715 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_12885 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PAB09_04340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_08800 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12875 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12890 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cors00220]
D PAB09_06530 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PAB09_06540 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAB09_06545 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAB09_00945 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PAB09_09105 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_09195 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_07470 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAB09_07475 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAB09_08560 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAB09_11910 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PAB09_06515 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PAB09_11350 GNAT family N-acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D PAB09_06520 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PAB09_06510 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PAB09_06525 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cors00330]
D PAB09_00495 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D PAB09_00505 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PAB09_03720 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D PAB09_03715 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D PAB09_04130 isochorismatase family protein K08687 E3.5.1.59; N-carbamoylsarcosine amidase [EC:3.5.1.59]
D PAB09_01525 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB09_12775 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB09_01770 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PAB09_11815 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAB09_09845 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PAB09_09840 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:cors00340]
D PAB09_07040 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PAB09_07045 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PAB09_08620 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PAB09_08635 priA; (GenBank) bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D PAB09_08640 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PAB09_08625 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PAB09_08655 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PAB09_00910 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_08660 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_09240 cobC; (GenBank) Rv2231c family pyridoxal phosphate-dependent protein CobC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_03905 hisN; (GenBank) histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D PAB09_08665 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cors00350]
D PAB09_00910 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_08660 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_09240 cobC; (GenBank) Rv2231c family pyridoxal phosphate-dependent protein CobC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_11770 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PAB09_04340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_08800 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12875 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12890 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_04755 fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism [PATH:cors00360]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_06425 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAB09_00910 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_08660 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_09240 cobC; (GenBank) Rv2231c family pyridoxal phosphate-dependent protein CobC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_01525 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB09_12775 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:cors00380]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_01000 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAB09_04715 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_01525 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB09_12775 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB09_12305 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cors00400]
D PAB09_08950 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PAB09_07535 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PAB09_07530 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PAB09_05410 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PAB09_07540 AAA family ATPase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PAB09_03225 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PAB09_07545 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PAB09_13030 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAB09_13035 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PAB09_13040 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PAB09_08635 priA; (GenBank) bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D PAB09_08610 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PAB09_13045 trpCF; (GenBank) bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D PAB09_13055 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PAB09_13025 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAB09_13050 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAB09_04345 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D PAB09_01020 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PAB09_12265 pheA; (GenBank) prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PAB09_00910 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_08660 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_09240 cobC; (GenBank) Rv2231c family pyridoxal phosphate-dependent protein CobC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cors00410]
D PAB09_12885 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PAB09_00745 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D PAB09_08460 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PAB09_11120 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PAB09_12845 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PAB09_12850 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_03850 acyl-CoA dehydrogenase family protein K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6]
D PAB09_00440 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:cors00430]
D PAB09_00745 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D PAB09_11430 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAB09_11425 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cors00450]
D PAB09_10015 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PAB09_09685 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PAB09_07060 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PAB09_07270 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PAB09_13155 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PAB09_11840 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PAB09_11845 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PAB09_04550 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cors00460]
D PAB09_08770 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PAB09_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cors00470]
D PAB09_02625 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PAB09_06260 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAB09_10360 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PAB09_08855 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAB09_06220 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PAB09_08030 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PAB09_05695 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cors00480]
D PAB09_04930 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PAB09_11325 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D PAB09_09055 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PAB09_10005 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PAB09_12070 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PAB09_02895 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAB09_06805 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PAB09_07330 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PAB09_10735 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cors00520]
D PAB09_03300 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PAB09_04795 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PAB09_10525 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAB09_01720 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAB09_11975 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PAB09_03285 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PAB09_02600 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PAB09_03280 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PAB09_09445 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB09_11035 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PAB09_03135 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PAB09_03295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_08970 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_07880 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D PAB09_10480 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAB09_04490 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB09_11915 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAB09_05545 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAB09_09210 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAB09_05540 galT; (GenBank) galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PAB09_07930 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAB09_09580 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAB09_12200 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PAB09_00985 mannose/fructose/sorbose PTS transporter subunit IIA K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PAB09_00980 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D PAB09_00975 manZ; (GenBank) PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D PAB09_02965 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAB09_03125 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAB09_03105 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAB09_05330 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PAB09_01620 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:cors00541]
D PAB09_04795 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PAB09_04490 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB09_11915 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAB09_01620 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB09_01630 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PAB09_01625 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D PAB09_03105 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cors00515]
D PAB09_04540 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cors00514]
D PAB09_04540 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cors00542]
D PAB09_05745 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:cors00550]
D PAB09_10525 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAB09_01720 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAB09_08840 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PAB09_08855 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAB09_08875 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAB09_06260 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAB09_08870 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PAB09_09565 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PAB09_07085 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PAB09_08865 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAB09_08845 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PAB09_00370 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_08850 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_08880 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAB09_00365 penicillin-binding transpeptidase domain-containing protein K05364 pbpA; penicillin-binding protein A
D PAB09_02930 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PAB09_11185 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PAB09_01320 MurT ligase domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D PAB09_01315 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cors00552]
D PAB09_07085 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PAB09_05745 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:cors00572]
D PAB09_05745 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PAB09_03100 glycosyltransferase family 2 protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D PAB09_00860 glycosyltransferase family 2 protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D PAB09_12170 glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D PAB09_00825 galactan 5-O-arabinofuranosyltransferase K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D PAB09_12155 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D PAB09_07810 glycosyltransferase family 87 protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D PAB09_11985 alpha-(1->3)-arabinofuranosyltransferase family protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D PAB09_03095 LCP family protein K27775 lcp1; cell wall biosynthesis protein
D PAB09_12150 alpha/beta hydrolase family protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
C 00543 Exopolysaccharide biosynthesis [PATH:cors00543]
D PAB09_05745 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PAB09_10545 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cors00730]
D PAB09_08420 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PAB09_05860 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_06215 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_08430 thiO; (GenBank) glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PAB09_07835 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PAB09_08440 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PAB09_02420 thiM; (GenBank) hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PAB09_08425 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PAB09_06275 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PAB09_03220 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PAB09_02470 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cors00740]
D PAB09_07400 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PAB09_07410 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PAB09_07395 ribH; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PAB09_07405 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PAB09_08185 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PAB09_03350 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PAB09_02420 thiM; (GenBank) hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:cors00750]
D PAB09_09585 pdxY; (GenBank) pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PAB09_04210 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAB09_09175 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAB09_11450 pdxS; (GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PAB09_11445 pdxT; (GenBank) pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cors00760]
D PAB09_06205 FAD-dependent oxidoreductase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PAB09_06200 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PAB09_06210 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PAB09_10390 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PAB09_00675 bifunctional UDP-sugar hydrolase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PAB09_09835 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PAB09_03375 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PAB09_10450 nadE; (GenBank) ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PAB09_08100 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PAB09_10290 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PAB09_06600 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PAB09_04340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_08800 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12875 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAB09_12890 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cors00770]
D PAB09_06030 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_12840 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_12870 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB09_06035 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAB09_06040 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PAB09_06015 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PAB09_08450 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PAB09_05090 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PAB09_08460 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PAB09_11120 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PAB09_04910 coaA; (GenBank) type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PAB09_07445 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PAB09_06305 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PAB09_06405 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PAB09_10310 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PAB09_08195 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D PAB09_08200 metallophosphoesterase K28885 pptH; [acyl-carrier-protein] phosphodiesterase [EC:3.1.4.14]
D PAB09_09050 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAB09_12845 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PAB09_12850 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:cors00780]
D PAB09_03860 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB09_06065 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PAB09_06660 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PAB09_06650 AAA family ATPase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PAB09_06665 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PAB09_00525 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D PAB09_03030 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cors00785]
D PAB09_09085 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PAB09_09090 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PAB09_05070 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_09385 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAB09_09065 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAB09_05395 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D PAB09_09070 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAB09_09075 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAB09_09080 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cors00790]
D PAB09_11160 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PAB09_11150 folB; (GenBank) dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PAB09_11145 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PAB09_11155 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PAB09_04285 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PAB09_09910 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PAB09_07400 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PAB09_01015 pabB; (GenBank) aminodeoxychorismate synthase component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D PAB09_10670 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PAB09_04495 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cors00670]
D PAB09_04285 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PAB09_07015 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PAB09_02870 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PAB09_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB09_04380 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PAB09_04385 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAB09_09075 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAB09_07060 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PAB09_04290 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PAB09_08150 thyX; (GenBank) FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D PAB09_08920 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PAB09_04485 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D PAB09_07440 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PAB09_03150 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAB09_09070 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_09080 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cors00860]
D PAB09_01060 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_06100 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_01795 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PAB09_01840 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PAB09_01810 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PAB09_01800 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PAB09_01830 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PAB09_01835 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PAB09_07175 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PAB09_07820 chlorite dismutase family protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D PAB09_08255 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PAB09_05230 TIGR04053 family radical SAM/SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D PAB09_07315 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAB09_07310 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAB09_06910 cobJ; (GenBank) precorrin-3B C(17)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D PAB09_06900 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D PAB09_06930 cobM; (GenBank) precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PAB09_04275 cobF; (GenBank) precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D PAB09_06925 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PAB09_06935 cbiE; (GenBank) precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PAB09_06905 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PAB09_08270 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PAB09_06890 cobN; (GenBank) cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PAB09_10530 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAB09_08275 cobO; (GenBank) cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAB09_08305 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PAB09_09260 cbiB; (GenBank) adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PAB09_09030 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PAB09_09040 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PAB09_09035 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PAB09_09225 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D PAB09_08285 AAA family ATPase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D PAB09_00245 ferritin-like domain-containing protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D PAB09_12995 multicopper oxidase family protein K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cors00130]
D PAB09_01970 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PAB09_06095 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D PAB09_01950 menD; (GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PAB09_01925 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PAB09_01895 menE; (GenBank) o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PAB09_01905 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PAB09_01885 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cors00900]
D PAB09_07835 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PAB09_08330 dxr; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PAB09_10935 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PAB09_04575 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PAB09_10930 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PAB09_08320 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PAB09_05010 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_09665 idi; (GenBank) isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PAB09_08925 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PAB09_04900 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D PAB09_09565 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:cors00907]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PAB09_07320 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products [PATH:cors01057]
D PAB09_12895 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K05556 actVI1; ketoreductase RED1 [EC:1.1.1.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cors00523]
D PAB09_01620 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB09_01630 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PAB09_01625 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cors01053]
D PAB09_06095 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D PAB09_08195 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
C 01055 Biosynthesis of vancomycin group antibiotics
D PAB09_01630 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cors00332]
D PAB09_09845 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PAB09_09840 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cors00261]
D PAB09_11840 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PAB09_11845 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PAB09_12320 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB09_12315 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAB09_03290 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAB09_08135 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAB09_08155 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cors00521]
D PAB09_03295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_08970 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_10480 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAB09_11685 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PAB09_07875 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAB09_08630 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAB09_01620 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB09_01630 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PAB09_01625 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PAB09_03295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PAB09_08970 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cors00525]
D PAB09_01620 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB09_01630 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cors00401]
D PAB09_01020 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PAB09_00910 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_08660 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_09240 cobC; (GenBank) Rv2231c family pyridoxal phosphate-dependent protein CobC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PAB09_13030 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAB09_13035 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PAB09_03860 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00975 Biosynthesis of various siderophores
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cors00999]
D PAB09_07440 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PAB09_05410 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
D PAB09_08925 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cors00362]
D PAB09_02735 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PAB09_00960 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAB09_07240 enoyl-CoA hydratase-related protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAB09_01000 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAB09_04715 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PAB09_06425 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:cors00627]
D PAB09_01525 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB09_12775 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB09_08530 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cors00625]
D PAB09_11770 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:cors00633]
D PAB09_03215 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D PAB09_05495 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D PAB09_05490 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:cors00643]
D PAB09_01525 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB09_12775 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D PAB09_00945 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
D PAB09_04670 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cors00626]
D PAB09_11770 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D PAB09_08900 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cors03020]
D PAB09_02085 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAB09_02090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAB09_02505 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAB09_07450 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D PAB09_04120 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cors03010]
D PAB09_00400 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_04050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_06565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_10520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_12500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_00405 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_04055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_06570 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_10515 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_12495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_00410 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_04060 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_06575 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_10510 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_12490 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_06395 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PAB09_08370 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PAB09_02210 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PAB09_02500 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PAB09_02440 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PAB09_12555 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PAB09_02145 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PAB09_02425 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PAB09_02575 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PAB09_02175 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PAB09_02495 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PAB09_02140 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PAB09_02490 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PAB09_04430 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PAB09_08165 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PAB09_08490 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PAB09_02225 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PAB09_04425 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PAB09_02200 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PAB09_09790 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PAB09_02020 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PAB09_02195 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PAB09_02180 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PAB09_02185 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PAB09_02410 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PAB09_02430 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PAB09_12545 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PAB09_02035 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PAB09_02015 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PAB09_02040 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PAB09_02570 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PAB09_02400 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PAB09_02450 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PAB09_02215 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PAB09_02510 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PAB09_02435 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PAB09_08415 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PAB09_06480 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PAB09_09865 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PAB09_02205 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PAB09_02190 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PAB09_02405 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PAB09_04765 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PAB09_09860 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PAB09_04440 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PAB09_02220 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PAB09_02445 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PAB09_04445 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PAB09_04450 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PAB09_04435 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PAB09_13205 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PAB09_06475 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PAB09_10445 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cors00970]
D PAB09_00105 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAB09_00215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAB09_03815 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAB09_10465 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAB09_00920 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_00925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_04265 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_05665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_10125 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_09430 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PAB09_09450 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PAB09_10570 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PAB09_10575 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PAB09_07760 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PAB09_04805 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PAB09_06110 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PAB09_06115 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAB09_06120 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAB09_10580 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAB09_07750 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_07765 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_07775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_09970 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_11925 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_10145 tRNA-His K14226 tRNA-His; tRNA His
D PAB09_00100 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PAB09_00390 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_04850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_06340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_07115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_10330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_10240 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAB09_10245 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAB09_10595 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAB09_01995 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAB09_03420 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAB09_09455 tRNA-Ile K14230 tRNA-Met; tRNA Met
D PAB09_10565 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PAB09_01380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAB09_06735 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAB09_09960 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAB09_00905 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAB09_00915 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAB09_01035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAB09_01190 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAB09_01550 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAB09_01990 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAB09_10875 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAB09_02000 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PAB09_01985 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PAB09_07755 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB09_07770 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB09_07780 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB09_09375 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB09_01060 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_06100 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_05915 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PAB09_05955 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PAB09_05910 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PAB09_07570 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB09_07585 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAB09_09545 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAB09_07730 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAB09_12240 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAB09_10925 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAB09_04550 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAB09_07425 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PAB09_09915 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAB09_12935 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAB09_08805 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAB09_11030 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAB09_05690 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAB09_08245 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAB09_07615 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAB09_06500 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAB09_06505 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAB09_06555 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAB09_02920 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:cors03008]
D PAB09_08545 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAB09_10140 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cors03060]
D PAB09_02465 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAB09_02005 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PAB09_07345 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAB09_07660 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAB09_07655 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAB09_07665 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PAB09_12455 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_13190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_03185 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAB09_06755 secA2; (GenBank) accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAB09_08495 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAB09_01215 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D PAB09_08515 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PAB09_06965 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D PAB09_05355 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D PAB09_06960 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PAB09_08410 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PAB09_08755 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D PAB09_11530 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cors04122]
D PAB09_05860 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_06215 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_02990 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_05590 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_11675 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAB09_05885 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PAB09_08445 ThiF family adenylyltransferase K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D PAB09_08435 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
D PAB09_06995 arc; (GenBank) proteasome ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:cors03018]
D PAB09_09870 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAB09_04830 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB09_08160 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PAB09_05580 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PAB09_05725 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PAB09_08130 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAB09_11810 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAB09_02670 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_11270 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_04595 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAB09_11260 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cors03030]
D PAB09_01325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_05895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_06080 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_08695 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_08735 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAB09_01545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAB09_09805 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAB09_00005 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAB09_12535 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PAB09_09440 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PAB09_10060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_12550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_09225 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D PAB09_08405 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PAB09_06385 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAB09_05900 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cors03410]
D PAB09_01425 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PAB09_06280 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PAB09_10970 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PAB09_08540 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAB09_12610 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAB09_04315 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D PAB09_00660 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PAB09_02910 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PAB09_11355 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PAB09_06385 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAB09_05900 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cors03420]
D PAB09_04815 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PAB09_06465 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PAB09_06415 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PAB09_07385 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PAB09_03365 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_03380 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_04350 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_06385 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAB09_05900 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAB09_04120 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cors03430]
D PAB09_03365 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_03380 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_04350 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_05005 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PAB09_05000 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PAB09_10060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_12550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_08735 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAB09_00005 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAB09_09805 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAB09_01545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAB09_01325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_05895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_06080 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_08695 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_05900 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cors03440]
D PAB09_10060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_12550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_00010 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PAB09_09570 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PAB09_01240 recombination mediator RecR K06187 recR; recombination protein RecR
D PAB09_08065 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D PAB09_06385 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAB09_07675 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PAB09_07670 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PAB09_07680 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PAB09_06290 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAB09_11870 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAB09_08735 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAB09_00005 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAB09_09805 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAB09_01545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAB09_01325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_05895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_06080 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_08695 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_07435 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cors03250]
D PAB09_00330 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cors02010]
D PAB09_00035 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D PAB09_00760 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D PAB09_00030 ABC transporter permease K15552 tauC; taurine transport system permease protein
D PAB09_00755 ABC transporter permease K15552 tauC; taurine transport system permease protein
D PAB09_00765 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PAB09_00040 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PAB09_05555 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PAB09_05560 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PAB09_05565 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PAB09_02130 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAB09_02315 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PAB09_02320 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAB09_02325 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAB09_03085 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PAB09_03080 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D PAB09_03075 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D PAB09_00310 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PAB09_00320 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PAB09_00315 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PAB09_00305 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PAB09_10645 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PAB09_10640 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D PAB09_10635 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PAB09_10630 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PAB09_11705 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D PAB09_11700 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D PAB09_11695 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D PAB09_11710 gluA; (GenBank) glutamate ABC transporter ATP-binding protein GluA K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D PAB09_03870 transporter substrate-binding domain-containing protein K17073 lysX1; putative lysine transport system substrate-binding protein
D PAB09_03875 amino acid ABC transporter permease K17073 lysX1; putative lysine transport system substrate-binding protein
D PAB09_03880 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D PAB09_02855 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PAB09_02845 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D PAB09_02850 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PAB09_05125 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PAB09_05130 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PAB09_05135 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PAB09_05140 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAB09_06370 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D PAB09_06365 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D PAB09_06360 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D PAB09_11110 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D PAB09_06355 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D PAB09_12640 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D PAB09_00865 metal ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PAB09_00875 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D PAB09_00880 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D PAB09_00870 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PAB09_04015 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D PAB09_04010 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D PAB09_04020 cbiQ; (GenBank) cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D PAB09_04025 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PAB09_08075 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D PAB09_08085 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D PAB09_08080 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D PAB09_02385 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PAB09_05110 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PAB09_05440 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PAB09_00890 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D PAB09_00885 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PAB09_04675 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D PAB09_12955 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D PAB09_12950 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D PAB09_03925 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PAB09_03920 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PAB09_13075 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PAB09_13070 ATP-binding cassette domain-containing protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PAB09_06345 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cors02060]
D PAB09_07985 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PAB09_08005 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D PAB09_02345 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PAB09_06400 glucose PTS transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PAB09_02730 hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PAB09_00985 mannose/fructose/sorbose PTS transporter subunit IIA K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PAB09_00980 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D PAB09_00975 manZ; (GenBank) PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D PAB09_12710 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PAB09_12715 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D PAB09_08000 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PAB09_07995 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cors03070]
D PAB09_07660 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAB09_07655 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAB09_02005 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PAB09_07345 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAB09_02465 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAB09_07665 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PAB09_12455 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_13190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_03185 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAB09_06755 secA2; (GenBank) accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAB09_08515 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PAB09_08495 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAB09_06965 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D PAB09_05355 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D PAB09_06960 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cors02020]
D PAB09_01745 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PAB09_01750 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PAB09_10645 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PAB09_10080 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D PAB09_07310 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAB09_04460 HAMP domain-containing sensor histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PAB09_04455 response regulator transcription factor K07669 mprA; two-component system, OmpR family, response regulator MprA
D PAB09_04465 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D PAB09_03160 mtrA; (GenBank) MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D PAB09_13210 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAB09_04405 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D PAB09_11875 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PAB09_01470 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAB09_01475 hypothetical protein K12510 tadB; tight adherence protein B
D PAB09_01480 type II secretion system F family protein K12511 tadC; tight adherence protein C
D PAB09_08500 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PAB09_08505 glnK; (GenBank) P-II family nitrogen regulator GlnK K04751 glnB; nitrogen regulatory protein P-II 1
D PAB09_09105 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_09195 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_11680 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D PAB09_05490 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D PAB09_05495 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D PAB09_12740 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D PAB09_01420 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PAB09_13060 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PAB09_13065 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PAB09_09250 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecule (CAM) interaction
C 04517 IgSF CAM signaling
C 04518 Integrin signaling
C 04519 Cadherin signaling
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagocytosis
C 04142 Lysosome biogenesis
C 04146 Peroxisome [PATH:cors04146]
D PAB09_08900 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D PAB09_03850 acyl-CoA dehydrogenase family protein K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6]
D PAB09_01730 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_09630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_03375 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PAB09_02895 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAB09_12305 catalase K03781 katE; catalase [EC:1.11.1.6]
D PAB09_12395 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04149 Peroxisome - yeast
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
C 04156 Integrated stress response (ISR) signaling pathway [PATH:cors04156]
D PAB09_01995 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAB09_03420 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAB09_09455 tRNA-Ile K14230 tRNA-Met; tRNA Met
D PAB09_11810 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAB09_02670 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_11270 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cors02024]
D PAB09_13030 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAB09_13035 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PAB09_08950 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PAB09_10080 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D PAB09_01730 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_09630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_01420 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PAB09_07410 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PAB09_10035 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PAB09_05125 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PAB09_05130 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PAB09_05135 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PAB09_05140 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAB09_03780 TIGR04028 family ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_05150 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_07650 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_09710 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_10230 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_11000 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_03775 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_05145 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_09715 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_10225 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_11005 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_03770 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB09_09720 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB09_10220 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB09_11010 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB09_03765 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB09_09725 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB09_10215 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB09_11015 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB09_12455 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_13190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_02045 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D PAB09_02005 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PAB09_07345 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAB09_02465 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAB09_07665 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PAB09_03185 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAB09_06755 secA2; (GenBank) accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAB09_08515 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PAB09_08495 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D PAB09_07885 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PAB09_04830 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagosome formation
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:cors04981]
D PAB09_04485 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D PAB09_04285 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PAB09_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB09_04290 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PAB09_07060 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:cors04980]
D PAB09_10530 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAB09_07130 meaB; (GenBank) methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D PAB09_07135 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_07140 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAB09_07060 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cors01501]
D PAB09_11975 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PAB09_05125 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PAB09_05130 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PAB09_05135 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PAB09_05140 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAB09_08880 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cors01502]
D PAB09_06260 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAB09_02625 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PAB09_08870 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PAB09_08865 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAB09_08845 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cors01503]
D PAB09_13165 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PAB09_00330 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cors01000]
C 01001 Protein kinases [BR:cors01001]
D PAB09_11400 protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D PAB09_00355 pknB; (GenBank) Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PAB09_00360 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PAB09_08940 pknB; (GenBank) Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PAB09_01745 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PAB09_04460 HAMP domain-containing sensor histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PAB09_10835 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cors01009]
D PAB09_03150 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAB09_00375 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PAB09_10410 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cors01002]
D PAB09_08755 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PAB09_05505 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D PAB09_02720 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAB09_07200 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAB09_07180 NlpC/P60 family protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D PAB09_10690 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PAB09_09135 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAB09_09445 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB09_09015 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PAB09_12275 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D PAB09_10005 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PAB09_12070 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PAB09_09650 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PAB09_00800 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PAB09_09055 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PAB09_05280 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAB09_11275 dipeptidase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D PAB09_02475 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PAB09_08310 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PAB09_11165 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PAB09_00810 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D PAB09_04465 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D PAB09_02045 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D PAB09_02540 S8 family serine peptidase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D PAB09_01645 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PAB09_10750 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PAB09_02930 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PAB09_11185 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PAB09_09945 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PAB09_09950 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PAB09_02285 brxL; (GenBank) BREX system Lon protease-like protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PAB09_03400 PDZ domain-containing protein K07177 K07177; Lon-like protease
D PAB09_07975 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PAB09_08410 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:cors01003]
D PAB09_06875 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PAB09_04540 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D PAB09_07710 glycosyltransferase family 4 protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D PAB09_08975 glycosyltransferase family 4 protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D PAB09_01965 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D PAB09_05325 glgA; (GenBank) glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D PAB09_00370 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_08850 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_05745 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PAB09_08930 alpha-(1->6)-mannopyranosyltransferase A K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D PAB09_07295 mptB; (GenBank) polyprenol phosphomannose-dependent alpha 1,6 mannosyltransferase MptB K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D PAB09_00820 arabinosyltransferase domain-containing protein K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D PAB09_00825 galactan 5-O-arabinofuranosyltransferase K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D PAB09_12155 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D PAB09_07810 glycosyltransferase family 87 protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D PAB09_11985 alpha-(1->3)-arabinofuranosyltransferase family protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D PAB09_00860 glycosyltransferase family 2 protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D PAB09_12170 glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D PAB09_03100 glycosyltransferase family 2 protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D PAB09_10890 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D PAB09_05295 glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cors01005]
D PAB09_05745 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cors01011]
D PAB09_10525 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAB09_01720 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAB09_08840 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PAB09_08855 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAB09_08875 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAB09_06260 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAB09_02625 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PAB09_10360 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PAB09_08865 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAB09_08845 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PAB09_07085 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PAB09_13145 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PAB09_08880 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAB09_00365 penicillin-binding transpeptidase domain-containing protein K05364 pbpA; penicillin-binding protein A
D PAB09_02930 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PAB09_11185 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PAB09_00370 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_08850 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_07180 NlpC/P60 family protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D PAB09_13165 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cors01004]
D PAB09_03250 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D PAB09_10320 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D PAB09_03860 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB09_07690 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20]
D PAB09_03210 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D PAB09_12100 pks13; (GenBank) polyketide synthase Pks13 K12437 pks13; polyketide synthase 13
D PAB09_04705 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAB09_01730 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_09630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_12125 FadD32-like long-chain-fatty-acid--AMP ligase K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-]
D PAB09_08965 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cors01008]
D PAB09_08195 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D PAB09_12895 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K05556 actVI1; ketoreductase RED1 [EC:1.1.1.-]
C 01006 Prenyltransferases [BR:cors01006]
D PAB09_08925 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PAB09_04900 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D PAB09_09565 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PAB09_08035 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PAB09_01885 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PAB09_07315 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAB09_12160 decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:cors01007]
D PAB09_01060 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_06100 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_06555 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAB09_02920 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PAB09_10925 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAB09_05690 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAB09_04550 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAB09_08805 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAB09_09915 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAB09_12935 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAB09_11030 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAB09_07585 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAB09_07615 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAB09_09545 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAB09_12240 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAB09_08245 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAB09_07730 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAB09_07570 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB09_06500 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAB09_06505 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAB09_11910 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PAB09_04095 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D PAB09_00910 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_08660 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_09240 cobC; (GenBank) Rv2231c family pyridoxal phosphate-dependent protein CobC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB09_06065 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PAB09_09685 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PAB09_06525 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PAB09_12885 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PAB09_06660 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PAB09_01840 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PAB09_09050 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAB09_04210 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cors00194]
D PAB09_05790 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PAB09_05785 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PAB09_05780 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PAB09_05775 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PAB09_05770 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PAB09_05765 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PAB09_05760 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PAB09_05755 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cors03000]
D PAB09_05040 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D PAB09_07960 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PAB09_05970 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D PAB09_07980 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D PAB09_07990 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D PAB09_12350 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PAB09_12245 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D PAB09_01260 FadR/GntR family transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D PAB09_11455 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PAB09_07195 TetR/AcrR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D PAB09_10535 LuxR C-terminal-related transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D PAB09_00620 MarR family winged helix-turn-helix transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PAB09_11795 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D PAB09_09555 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PAB09_01420 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PAB09_12075 Crp/Fnr family transcriptional regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D PAB09_01585 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PAB09_01870 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PAB09_11550 metalloregulator ArsR/SmtB family transcription factor K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D PAB09_01665 ramB; (GenBank) acetate metabolism transcriptional regulator RamB K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D PAB09_08095 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D PAB09_07925 metal-dependent regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D PAB09_03030 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PAB09_02595 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D PAB09_03630 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D PAB09_03820 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D PAB09_11815 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAB09_01210 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D PAB09_01400 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PAB09_02675 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PAB09_03110 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PAB09_03270 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PAB09_10195 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D PAB09_11785 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D PAB09_13175 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAB09_10940 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PAB09_06535 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PAB09_09615 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D PAB09_07490 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PAB09_13125 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D PAB09_07970 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D PAB09_08895 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cors03021]
D PAB09_04120 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PAB09_02505 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAB09_02085 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAB09_02090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAB09_07450 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PAB09_07885 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D PAB09_07920 sigma-70 family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D PAB09_02680 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PAB09_03240 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PAB09_05345 sigE; (GenBank) RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PAB09_12310 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PAB09_08230 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PAB09_07515 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PAB09_02010 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PAB09_04880 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PAB09_05725 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cors03019]
D PAB09_09870 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAB09_08545 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAB09_08130 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAB09_09510 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D PAB09_10140 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PAB09_05580 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PAB09_04830 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB09_08160 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PAB09_05725 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PAB09_11810 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAB09_02670 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_11270 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_04595 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAB09_11260 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAB09_04640 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D PAB09_07380 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D PAB09_06955 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D PAB09_07965 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PAB09_00645 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cors03011]
D PAB09_06395 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PAB09_08370 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PAB09_02210 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PAB09_02500 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PAB09_02440 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PAB09_12555 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PAB09_02145 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PAB09_02425 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PAB09_02575 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PAB09_02175 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PAB09_02495 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PAB09_02140 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PAB09_02490 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PAB09_04430 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PAB09_08165 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PAB09_08490 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PAB09_02225 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PAB09_04425 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PAB09_02200 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PAB09_09790 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PAB09_02020 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PAB09_02195 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PAB09_02180 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PAB09_02185 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PAB09_02410 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PAB09_02430 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PAB09_12545 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PAB09_02035 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PAB09_02015 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PAB09_02040 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PAB09_02570 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PAB09_02400 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PAB09_02450 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PAB09_02215 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PAB09_02510 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PAB09_02435 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PAB09_08415 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PAB09_06480 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PAB09_09865 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PAB09_02205 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PAB09_02190 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PAB09_02405 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PAB09_09860 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PAB09_04440 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PAB09_02220 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PAB09_02445 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PAB09_04445 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PAB09_04450 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PAB09_04435 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PAB09_13205 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PAB09_06475 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PAB09_10445 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PAB09_04765 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PAB09_00400 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_04050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_06565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_10520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_12500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_00405 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_04055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_06570 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_10515 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_12495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_00410 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_04060 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_06575 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_10510 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_12490 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cors03009]
D PAB09_08545 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAB09_10140 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PAB09_09575 era; (GenBank) GTPase Era K03595 era; GTPase
D PAB09_09850 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PAB09_08230 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PAB09_07515 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PAB09_02010 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PAB09_04570 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PAB09_07420 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PAB09_06300 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PAB09_09605 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PAB09_13185 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PAB09_08890 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PAB09_04545 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PAB09_06595 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PAB09_05310 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PAB09_10920 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PAB09_08340 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PAB09_12480 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PAB09_06680 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PAB09_08750 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PAB09_02650 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase / [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]
D PAB09_08480 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D PAB09_09870 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAB09_05580 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PAB09_03220 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PAB09_06690 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D PAB09_08015 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D PAB09_05740 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PAB09_07640 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PAB09_08215 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D PAB09_08235 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D PAB09_00705 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D PAB09_09830 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D PAB09_09595 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D PAB09_05035 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D PAB09_08550 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cors03016]
D PAB09_09510 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D PAB09_13130 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PAB09_01060 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_06100 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_08245 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAB09_08805 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAB09_12935 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAB09_04550 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAB09_05690 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAB09_11030 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAB09_07585 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAB09_07570 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB09_09545 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAB09_07730 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAB09_12240 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAB09_10925 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAB09_09915 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAB09_07615 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAB09_06500 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAB09_06505 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAB09_06555 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAB09_02920 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PAB09_07915 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PAB09_08055 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PAB09_07000 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D PAB09_12045 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PAB09_02520 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PAB09_08190 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PAB09_05860 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_06215 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_05740 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PAB09_08035 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PAB09_04295 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PAB09_13200 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PAB09_10350 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PAB09_07830 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PAB09_10055 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D PAB09_03235 ybaK; (GenBank) Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PAB09_01030 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PAB09_08475 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PAB09_02865 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PAB09_06495 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D PAB09_12480 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PAB09_05885 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PAB09_10675 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D PAB09_01050 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PAB09_11180 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PAB09_02645 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PAB09_02655 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PAB09_02630 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PAB09_03955 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PAB09_08160 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cors03012]
D PAB09_08220 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PAB09_06470 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PAB09_08365 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D PAB09_02155 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D PAB09_02150 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D PAB09_05730 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PAB09_08355 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D PAB09_05735 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PAB09_04745 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PAB09_04760 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PAB09_02485 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PAB09_07520 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D PAB09_03915 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PAB09_04735 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cors03110]
D PAB09_11720 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PAB09_10990 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PAB09_09935 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PAB09_11810 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAB09_02670 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_11270 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_09610 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PAB09_11800 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PAB09_11805 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PAB09_11530 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D PAB09_08715 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PAB09_02665 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D PAB09_11165 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PAB09_05755 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PAB09_07740 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D PAB09_05480 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PAB09_05510 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PAB09_05485 hypB; (GenBank) hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D PAB09_02045 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D PAB09_02540 S8 family serine peptidase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D PAB09_00330 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PAB09_07630 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PAB09_12520 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
D PAB09_13160 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
D PAB09_05820 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:cors04131]
D PAB09_09880 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAB09_04645 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAB09_07365 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAB09_01740 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAB09_08600 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB09_12300 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB09_10865 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:cors04121]
D PAB09_06985 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cors03051]
D PAB09_06995 arc; (GenBank) proteasome ATPase K13527 mpa; proteasome-associated ATPase
D PAB09_06980 pafA; (GenBank) Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D PAB09_06975 WYL domain-containing protein K13572 pafB; proteasome accessory factor B
D PAB09_06970 WYL domain-containing protein K13573 pafC; proteasome accessory factor C
D PAB09_06990 dop; (GenBank) depupylase/deamidase Dop K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cors03032]
D PAB09_13210 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAB09_12535 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PAB09_09440 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PAB09_10060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_12550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_08735 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAB09_00005 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAB09_09805 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAB09_01545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAB09_01325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_05895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_06080 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_08695 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_09225 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D PAB09_08405 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PAB09_06385 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAB09_05900 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAB09_00085 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PAB09_00020 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PAB09_01515 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cors03036]
D PAB09_08545 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAB09_12425 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D PAB09_13210 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAB09_05970 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D PAB09_08525 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D PAB09_06645 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D PAB09_06675 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D PAB09_03920 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PAB09_08880 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAB09_08120 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PAB09_08835 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D PAB09_00370 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_08850 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_03925 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PAB09_08830 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAB09_13165 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PAB09_08820 sepF; (GenBank) cell division protein SepF K09772 sepF; cell division inhibitor SepF
D PAB09_06640 ParA family protein K03496 parA; chromosome partitioning protein
D PAB09_13180 ParA family protein K03496 parA; chromosome partitioning protein
D PAB09_13175 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAB09_13185 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PAB09_08380 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PAB09_06630 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PAB09_05370 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PAB09_03690 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PAB09_11570 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PAB09_07370 whiA; (GenBank) DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cors03400]
D PAB09_08265 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PAB09_06280 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PAB09_10970 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PAB09_01425 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PAB09_04120 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PAB09_05575 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PAB09_11385 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PAB09_07860 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PAB09_00655 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D PAB09_00660 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PAB09_08540 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAB09_12610 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAB09_04315 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D PAB09_02910 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PAB09_11355 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PAB09_05900 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAB09_06385 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAB09_06465 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PAB09_06415 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PAB09_07385 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PAB09_03365 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_03380 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_04350 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAB09_02085 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAB09_02090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAB09_02505 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAB09_07450 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PAB09_04815 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PAB09_05005 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PAB09_05000 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PAB09_08735 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAB09_00005 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAB09_09805 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAB09_01545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAB09_01325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_05895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_06080 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_08695 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAB09_10060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_12550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_08065 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D PAB09_07675 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PAB09_07670 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PAB09_07680 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PAB09_07435 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PAB09_10955 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PAB09_00010 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PAB09_06290 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAB09_11870 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAB09_09570 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PAB09_01240 recombination mediator RecR K06187 recR; recombination protein RecR
D PAB09_06605 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PAB09_10090 cas1e; (GenBank) type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D PAB09_00085 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PAB09_00020 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PAB09_01515 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PAB09_08775 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PAB09_07975 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PAB09_02795 DNA polymerase Y family protein K14161 imuB; protein ImuB
D PAB09_02860 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D PAB09_08060 recX; (GenBank) recombination regulator RecX K03565 recX; regulatory protein
D PAB09_10395 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PAB09_04300 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PAB09_06250 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D PAB09_06625 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D PAB09_10430 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAB09_10420 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PAB09_08210 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cors03029]
D PAB09_08220 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PAB09_06470 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PAB09_08365 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D PAB09_02155 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D PAB09_02150 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D PAB09_09575 era; (GenBank) GTPase Era K03595 era; GTPase
D PAB09_06555 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAB09_12935 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAB09_07585 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAB09_09545 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAB09_05690 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAB09_05915 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PAB09_05955 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PAB09_05910 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PAB09_10060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_12550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAB09_11810 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAB09_11805 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PAB09_02670 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_11270 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_02665 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D PAB09_09610 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PAB09_11800 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PAB09_05860 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_06215 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_05370 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PAB09_07315 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAB09_07310 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAB09_12455 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_13190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cors02000]
D PAB09_05400 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAB09_09680 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAB09_12620 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAB09_13075 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PAB09_13070 ATP-binding cassette domain-containing protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PAB09_06345 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D PAB09_04580 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D PAB09_06700 ABC transporter ATP-binding protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D PAB09_00035 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D PAB09_00760 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D PAB09_00030 ABC transporter permease K15552 tauC; taurine transport system permease protein
D PAB09_00755 ABC transporter permease K15552 tauC; taurine transport system permease protein
D PAB09_00765 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PAB09_00040 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PAB09_05555 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PAB09_05560 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PAB09_05565 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PAB09_02130 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAB09_02315 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PAB09_02320 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAB09_02325 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAB09_03085 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PAB09_03080 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D PAB09_03075 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D PAB09_00310 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PAB09_00320 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PAB09_00315 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PAB09_00305 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PAB09_00265 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D PAB09_00270 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D PAB09_00275 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAB09_10645 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PAB09_10640 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D PAB09_10635 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PAB09_10630 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PAB09_11705 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D PAB09_11700 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D PAB09_11695 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D PAB09_11710 gluA; (GenBank) glutamate ABC transporter ATP-binding protein GluA K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D PAB09_02855 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PAB09_02845 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D PAB09_02850 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PAB09_06715 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PAB09_06720 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D PAB09_06725 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D PAB09_03870 transporter substrate-binding domain-containing protein K17073 lysX1; putative lysine transport system substrate-binding protein
D PAB09_03875 amino acid ABC transporter permease K17073 lysX1; putative lysine transport system substrate-binding protein
D PAB09_03880 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D PAB09_06330 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PAB09_11395 glutamate ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PAB09_12680 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PAB09_12820 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PAB09_06325 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PAB09_12685 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PAB09_12690 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PAB09_12815 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PAB09_06320 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PAB09_12695 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PAB09_12810 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PAB09_05125 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PAB09_05130 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PAB09_05135 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PAB09_05140 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAB09_03780 TIGR04028 family ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_05150 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_07650 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_09710 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_10230 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_11000 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB09_03775 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_05145 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_09715 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_10225 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_11005 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB09_03770 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB09_09720 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB09_10220 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB09_11010 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB09_03765 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB09_09725 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB09_10215 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB09_11015 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB09_12640 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D PAB09_06370 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D PAB09_06365 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D PAB09_06360 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D PAB09_11110 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D PAB09_06355 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D PAB09_04030 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D PAB09_04040 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D PAB09_04035 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein
D PAB09_04045 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D PAB09_09890 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAB09_09895 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D PAB09_05835 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAB09_09900 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAB09_10020 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAB09_12635 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D PAB09_12645 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D PAB09_00865 metal ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PAB09_00875 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D PAB09_00880 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D PAB09_00870 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PAB09_04015 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D PAB09_04020 cbiQ; (GenBank) cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D PAB09_04010 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D PAB09_04025 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PAB09_08075 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D PAB09_08085 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D PAB09_08080 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D PAB09_02375 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component
D PAB09_02385 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PAB09_05110 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PAB09_05440 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PAB09_02380 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PAB09_05105 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PAB09_05095 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D PAB09_00890 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D PAB09_00885 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PAB09_04675 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D PAB09_12955 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D PAB09_12950 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D PAB09_01935 multidrug ABC transporter permease K25149 narB; polyether ionophore transport system permease protein
D PAB09_12115 hypothetical protein K25149 narB; polyether ionophore transport system permease protein
D PAB09_01940 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D PAB09_12120 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D PAB09_03925 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PAB09_03920 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PAB09_07305 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB09_09745 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB09_11375 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB09_07300 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB09_09740 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB09_11380 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB09_12370 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB09_00460 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PAB09_04355 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PAB09_10500 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PAB09_00465 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAB09_04360 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAB09_04680 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAB09_10505 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAB09_07275 sufC; (GenBank) Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PAB09_13085 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PAB09_11370 hypothetical protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D PAB09_08205 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PAB09_00500 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PAB09_04695 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PAB09_04325 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PAB09_12530 MFS transporter K28762 niaP; MFS transporter, niacin uptake porter
D PAB09_11365 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PAB09_05155 MFS transporter K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D PAB09_02900 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PAB09_10850 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D PAB09_02810 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PAB09_12400 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PAB09_10865 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D PAB09_07985 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PAB09_08005 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D PAB09_02345 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PAB09_06400 glucose PTS transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PAB09_08000 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PAB09_02730 hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PAB09_00985 mannose/fructose/sorbose PTS transporter subunit IIA K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PAB09_00980 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D PAB09_00975 manZ; (GenBank) PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D PAB09_12710 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PAB09_12715 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D PAB09_12190 aqpZ; (GenBank) aquaporin Z K06188 aqpZ; aquaporin
D PAB09_03370 potassium channel family protein K10716 kch; voltage-gated potassium channel
D PAB09_08510 ammonium transporter K03320 amt; ammonium transporter, Amt family
D PAB09_00425 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PAB09_05930 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PAB09_04475 mscL; (GenBank) large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D PAB09_06025 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D PAB09_10025 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D PAB09_06815 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D PAB09_10490 fluoride efflux transporter family protein K06199 crcB; fluoride exporter
D PAB09_10495 CrcB family protein K06199 crcB; fluoride exporter
D PAB09_06790 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAB09_06795 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAB09_09590 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAB09_08780 amino acid permease K11738 ansP; L-asparagine permease
D PAB09_05270 amino acid permease K16237 aroP; aromatic amino acid permease
D PAB09_02760 eat; (GenBank) ethanolamine permease K16238 eat; ethanolamine permease
D PAB09_03595 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PAB09_06045 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PAB09_05080 zupT; (GenBank) zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D PAB09_12055 MMPL family transporter K20470 mmpL3; trehalose monomycolate/heme transporter
D PAB09_10605 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D PAB09_02705 DMT family transporter K11939 rhtA; inner membrane transporter RhtA
D PAB09_08740 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D PAB09_10035 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PAB09_09145 TRAP transporter large permease subunit K07084 yuiF; putative amino acid transporter
D PAB09_01245 GntP family transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PAB09_07025 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PAB09_05685 L-lactate permease K03303 lutP; lactate permease
D PAB09_00295 sodium/proline symporter K11928 putP; sodium/proline symporter
D PAB09_05615 putP; (GenBank) sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D PAB09_04155 cation acetate symporter K14393 actP; cation/acetate symporter
D PAB09_04245 cation acetate symporter K14393 actP; cation/acetate symporter
D PAB09_04780 cation acetate symporter K14393 actP; cation/acetate symporter
D PAB09_11680 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D PAB09_06670 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D PAB09_10785 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PAB09_10780 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D PAB09_05060 purine/pyrimidine permease K24206 uacT; uric acid transporter
D PAB09_04190 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PAB09_05100 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PAB09_10040 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter
D PAB09_00475 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D PAB09_05660 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D PAB09_12740 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D PAB09_01590 arsB; (GenBank) ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D PAB09_01360 DUF4040 family protein K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D PAB09_11290 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D PAB09_01355 cation:proton antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PAB09_11295 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PAB09_01350 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PAB09_11300 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PAB09_01345 monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PAB09_11305 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PAB09_11310 monovalent cation/H+ antiporter complex subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PAB09_11315 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PAB09_13145 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PAB09_01535 oligopeptide transporter, OPT family K28868 K28868; oligopeptide transporter family protein
D PAB09_09705 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D PAB09_09760 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D PAB09_05965 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PAB09_09795 LysE family translocator K05835 rhtC; threonine efflux protein
D PAB09_13120 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D PAB09_13115 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D PAB09_01055 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D PAB09_09560 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D PAB09_10695 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D PAB09_00370 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_08850 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PAB09_00785 FTR1 family protein K07243 FTR; high-affinity iron transporter
D PAB09_00780 peptidase M75 family protein K07224 efeO; iron uptake system component EfeO
D PAB09_00775 efeB; (GenBank) iron uptake transporter deferrochelatase/peroxidase subunit K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D PAB09_01855 cytochrome c biogenesis CcdA family protein K06196 ccdA; cytochrome c-type biogenesis protein
D PAB09_12060 YbhN family protein K20468 K20468; putative heme transporter
D PAB09_03890 FeoA family protein K04758 feoA; ferrous iron transport protein A
D PAB09_03895 feoB; (GenBank) ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PAB09_03605 copper resistance protein CopC K07156 copC; copper resistance protein C
D PAB09_07745 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cors02044]
D PAB09_01470 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAB09_01475 hypothetical protein K12510 tadB; tight adherence protein B
D PAB09_01480 type II secretion system F family protein K12511 tadC; tight adherence protein C
D PAB09_08815 YggT family protein K02221 yggT; YggT family protein
D PAB09_09815 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D PAB09_02550 eccCa; (GenBank) type VII secretion protein EccCa K27086 eccC; ESX secretion system protein EccC
D PAB09_02545 eccD; (GenBank) type VII secretion integral membrane protein EccD K27087 eccD; ESX secretion system protein EccD
D PAB09_02540 S8 family serine peptidase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D PAB09_02560 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein
D PAB09_02565 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein
D PAB09_03185 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAB09_06755 secA2; (GenBank) accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAB09_07660 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAB09_02005 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PAB09_07655 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAB09_07345 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAB09_02465 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAB09_08495 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAB09_08515 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PAB09_07665 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PAB09_12455 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_13190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAB09_06965 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D PAB09_05355 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D PAB09_06960 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cors02042]
D PAB09_06790 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAB09_06795 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAB09_09590 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAB09_10710 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cors02022]
D PAB09_01745 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PAB09_01750 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PAB09_10080 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D PAB09_04460 HAMP domain-containing sensor histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PAB09_04455 response regulator transcription factor K07669 mprA; two-component system, OmpR family, response regulator MprA
D PAB09_03160 mtrA; (GenBank) MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D PAB09_10835 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PAB09_10840 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:cors02035]
D PAB09_01470 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cors04812]
D PAB09_08830 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAB09_06640 ParA family protein K03496 parA; chromosome partitioning protein
D PAB09_13180 ParA family protein K03496 parA; chromosome partitioning protein
D PAB09_13175 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cors04147]
D PAB09_04830 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB09_04645 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAB09_07365 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAB09_07360 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAB09_08600 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB09_12300 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB09_00330 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PAB09_02670 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_11270 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAB09_11810 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAB09_02695 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAB09_02700 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAB09_02155 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D PAB09_12330 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAB09_13085 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PAB09_01730 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_09630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PAB09_11370 hypothetical protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D PAB09_00955 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_04660 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_07250 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB09_03150 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAB09_02470 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAB09_07645 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PAB09_06545 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAB09_06540 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAB09_05545 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAB09_09210 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAB09_05825 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PAB09_12210 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PAB09_09105 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_09195 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB09_01810 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PAB09_06060 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAB09_04385 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAB09_01655 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAB09_05855 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D PAB09_07330 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PAB09_07355 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAB09_01740 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cors02048]
D PAB09_10090 cas1e; (GenBank) type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D PAB09_10085 cas2e; (GenBank) type I-E CRISPR-associated endoribonuclease Cas2e K09951 cas2; CRISPR-associated protein Cas2
D PAB09_10120 cas3; (GenBank) CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PAB09_10115 casA; (GenBank) type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA
D PAB09_10110 casB; (GenBank) type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D PAB09_10105 cas7e; (GenBank) type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D PAB09_10100 cas5e; (GenBank) type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D PAB09_10095 cas6e; (GenBank) type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D PAB09_03540 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PAB09_08830 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAB09_01060 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_06100 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB09_05860 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAB09_06215 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cors01504]
D PAB09_06345 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D PAB09_10850 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cors03100]
D PAB09_00105 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAB09_00215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAB09_03815 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAB09_10465 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAB09_00920 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_00925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_04265 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_05665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_10125 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAB09_09430 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PAB09_09450 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PAB09_10570 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PAB09_10575 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PAB09_07760 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PAB09_04805 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PAB09_06110 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PAB09_06115 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAB09_06120 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAB09_10580 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAB09_07750 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_07765 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_07775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_09970 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_11925 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAB09_10145 tRNA-His K14226 tRNA-His; tRNA His
D PAB09_00100 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PAB09_00390 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_04850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_06340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_07115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_10330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAB09_10240 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAB09_10245 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAB09_10595 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAB09_01995 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAB09_03420 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAB09_09455 tRNA-Ile K14230 tRNA-Met; tRNA Met
D PAB09_10565 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PAB09_01380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAB09_06735 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAB09_09960 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAB09_00905 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAB09_00915 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAB09_01035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAB09_01190 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAB09_01550 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAB09_01990 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAB09_10875 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAB09_02000 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PAB09_01985 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PAB09_07755 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB09_07770 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB09_07780 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB09_09375 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB09_00400 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_04050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_06565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_10520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_12500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAB09_00405 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_04055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_06570 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_10515 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_12495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAB09_00410 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_04060 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_06575 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_10510 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_12490 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAB09_03990 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D PAB09_01215 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PAB09_07035 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D PAB09_00830 decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D PAB09_04230 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PAB09_05960 mgrA; (GenBank) L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PAB09_00835 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D PAB09_01265 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PAB09_01975 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D PAB09_06160 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D PAB09_02975 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PAB09_08300 mtr; (GenBank) mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D PAB09_12390 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PAB09_07815 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PAB09_05980 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PAB09_07735 Dyp-type peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D PAB09_10300 bcp; (GenBank) thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PAB09_07625 tpx; (GenBank) thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PAB09_01500 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PAB09_07950 carboxymuconolactone decarboxylase family protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D PAB09_07955 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D PAB09_03255 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PAB09_00095 globin domain-containing protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PAB09_11600 merA; (GenBank) mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D PAB09_10425 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PAB09_11435 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PAB09_11865 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PAB09_05175 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PAB09_04280 mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D PAB09_12185 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PAB09_06835 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PAB09_00650 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PAB09_10650 mshD; (GenBank) mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D PAB09_06880 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PAB09_04555 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D PAB09_12005 acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D PAB09_04180 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D PAB09_01735 mshA; (GenBank) D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D PAB09_08605 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PAB09_10725 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PAB09_06285 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D PAB09_09190 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PAB09_01595 low molecular weight phosphatase family protein K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D PAB09_05415 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D PAB09_12135 cutinase family protein K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D PAB09_00560 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D PAB09_10050 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PAB09_09825 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D PAB09_12165 phosphatase PAP2 family protein K27842 E3.1.3.111; decaprenylphosphoryl-5-phosphoribose phosphatase [EC:3.1.3.111]
D PAB09_03960 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PAB09_04560 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PAB09_05800 nucS; (GenBank) endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D PAB09_12090 DUF4185 domain-containing protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D PAB09_07430 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PAB09_11345 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PAB09_12785 proline iminopeptidase-family hydrolase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D PAB09_05200 PIG-L family deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D PAB09_04890 mca; (GenBank) mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D PAB09_11755 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PAB09_00510 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PAB09_04220 fkpA; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PAB09_07080 mshC; (GenBank) cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D PAB09_04225 acetyl-CoA carboxylase carboxyl transferase subunit alpha/beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D PAB09_11080 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PAB09_12085 cation-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PAB09_04725 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D PAB09_05680 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PAB09_05675 LutB/LldF family L-lactate oxidation iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PAB09_05670 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PAB09_02460 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D PAB09_07265 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PAB09_05850 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D PAB09_10435 nrdI; (GenBank) class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D PAB09_09755 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PAB09_04165 DUF3235 domain-containing protein K21687 rpfA; resuscitation-promoting factor RpfA
D PAB09_04565 transglycosylase family protein K21688 rpfB; resuscitation-promoting factor RpfB
D PAB09_01610 glycosyltransferase family 2 protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
D PAB09_08280 VWA domain-containing protein K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
D PAB09_10915 poly(3-hydroxyalkanoate) depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
C 99999 Others
D PAB09_04510 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PAB09_01510 cold-shock protein K03704 cspA; cold shock protein
D PAB09_04170 cold-shock protein K03704 cspA; cold shock protein
D PAB09_08465 Tex family protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D PAB09_10380 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PAB09_09955 tig; (GenBank) trigger factor K03545 tig; trigger factor
D PAB09_03935 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D PAB09_05465 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D PAB09_05460 hypD; (GenBank) hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D PAB09_05470 hypE; (GenBank) hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D PAB09_05475 hypF; (GenBank) carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D PAB09_10440 nrdH; (GenBank) glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D PAB09_08390 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D PAB09_01860 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D PAB09_08395 YraN family protein K07460 yraN; putative endonuclease
D PAB09_07010 RecB family exonuclease K07465 K07465; putative RecB family exonuclease
D PAB09_08385 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D PAB09_11405 DNA-protecting protein DprA K04096 smf; DNA processing protein
D PAB09_07575 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PAB09_06130 transposase K07483 K07483; transposase
D PAB09_10810 hypothetical protein K07483 K07483; transposase
D PAB09_07790 IS256 family transposase K07493 K07493; putative transposase
D PAB09_10185 IS256 family transposase K07493 K07493; putative transposase
D PAB09_01115 IS3 family transposase K07497 K07497; putative transposase
D PAB09_03575 IS3 family transposase K07497 K07497; putative transposase
D PAB09_05240 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PAB09_08090 PspA/IM30 family protein K03969 pspA; phage shock protein A
D PAB09_01235 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PAB09_06655 oligopeptide:H+ symporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PAB09_05530 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D PAB09_05030 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PAB09_08535 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PAB09_12285 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PAB09_11790 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PAB09_02635 aspartate:alanine exchanger family transporter K07085 K07085; putative transport protein
D PAB09_03940 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D PAB09_05190 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D PAB09_07210 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D PAB09_09600 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PAB09_06075 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D PAB09_01605 DUF2304 domain-containing protein K09153 K09153; small membrane protein
C 99994 Others
D PAB09_10620 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D PAB09_06265 NAD(P)-binding domain-containing protein K07222 K07222; putative flavoprotein involved in K+ transport
D PAB09_10270 hypothetical protein K26995 sdpB; sporulation delaying protein B
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PAB09_01505 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D PAB09_10030 globin K06886 glbN; hemoglobin
D PAB09_01045 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D PAB09_04615 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D PAB09_11935 efflux RND transporter permease subunit K06994 K06994; putative drug exporter of the RND superfamily
D PAB09_00345 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D PAB09_00585 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D PAB09_12360 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PAB09_07285 sufB; (GenBank) Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PAB09_07280 sufD; (GenBank) Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PAB09_02925 yhjD; (GenBank) inner membrane protein YhjD K07058 K07058; membrane protein
D PAB09_06885 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D PAB09_12440 DUF2020 domain-containing protein K07146 K07146; UPF0176 protein
D PAB09_12605 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D PAB09_09150 VOC family protein K04750 phnB; PhnB protein
D PAB09_10070 VTT domain-containing protein K03975 dedA; membrane-associated protein
D PAB09_01285 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D PAB09_01290 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D PAB09_06335 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D PAB09_00615 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D PAB09_06745 YchJ family protein K09858 K09858; SEC-C motif domain protein
D PAB09_09125 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA
C 99997 Function unknown
D PAB09_12050 NYN domain-containing protein K06860 K06860; putative heme uptake system protein
D PAB09_09625 hypothetical protein K06867 K06867; uncharacterized protein
D PAB09_09800 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D PAB09_03260 N-acetyltransferase K06975 K06975; uncharacterized protein
D PAB09_10550 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D PAB09_10740 DUF2334 domain-containing protein K06986 K06986; uncharacterized protein
D PAB09_00710 VOC family protein K06996 K06996; uncharacterized protein
D PAB09_10460 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D PAB09_06170 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D PAB09_07590 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D PAB09_07495 DUF1731 domain-containing protein K07071 K07071; uncharacterized protein
D PAB09_06375 permease K07089 K07089; uncharacterized protein
D PAB09_00630 TSUP family transporter K07090 K07090; uncharacterized protein
D PAB09_06310 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PAB09_11830 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PAB09_01270 PhoX family phosphatase K07093 K07093; uncharacterized protein
D PAB09_01385 metallophosphoesterase K07098 K07098; uncharacterized protein
D PAB09_00470 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PAB09_04310 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D PAB09_00625 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D PAB09_00280 DUF4143 domain-containing protein K07133 K07133; uncharacterized protein
D PAB09_06430 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D PAB09_09230 C4-type zinc ribbon domain-containing protein K07164 K07164; uncharacterized protein
D PAB09_13195 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D PAB09_06770 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D PAB09_04840 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D PAB09_01390 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D PAB09_03415 UPF0182 family protein K09118 K09118; uncharacterized protein
D PAB09_05180 DUF402 domain-containing protein K09146 K09146; uncharacterized protein
D PAB09_07215 PFL family protein K09157 K09157; uncharacterized protein
D PAB09_03565 YfbU family protein K09161 K09161; uncharacterized protein
D PAB09_12765 DUF2075 domain-containing protein K09384 K09384; uncharacterized protein
D PAB09_02230 YciI family protein K09780 K09780; uncharacterized protein
D PAB09_08110 YciI family protein K09780 K09780; uncharacterized protein
D PAB09_05075 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D PAB09_06550 Trm112 family protein K09791 K09791; uncharacterized protein
D PAB09_08250 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D PAB09_08225 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 11, 2026