+F Repair protein KO
#
DNA Repair and Recombination Proteins - Candida orthopsilosis
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D CORT_0E04550 DNA repair methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E CORT_0C04030 Ung1 protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E CORT_0A05590 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E CORT_0G02630 Ogg1 protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E CORT_0A06760 Ntg1 protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E CORT_0C04060 Apn1 protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E CORT_0A11880 Apn2 class II abasic (AP) endonuclease K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F CORT_0G02430 Pol3 large subunit of DNA polymerase III K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F CORT_0F01510 Hys2 DNA polymerase III (delta) subunit K02328 POLD2; DNA polymerase delta subunit 2
F CORT_0B08550 Pol32 protein K03504 POLD3; DNA polymerase delta subunit 3
E DNA polymerase epsilon complex
F CORT_0D05520 Pol2 DNA polymerase epsilon K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F CORT_0D01000 Dpb2 subunit of DNA polymerase II (DNA polymerase epsilon) K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F CORT_0A12650 DNA polymerase epsilon subunit D K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F CORT_0B10040 Hfl1 HAP5-like protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E CORT_0E01250 Pol30 protein K04802 PCNA; proliferating cell nuclear antigen
E CORT_0D04310 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E CORT_0B03610 Cdc9 protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E CORT_0B04230 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E CORT_0A02110 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F CORT_0C00970 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F CORT_0A09550 Rad23 protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F CORT_0B04130 Hrt1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F CORT_0B05010 hypothetical protein K10609 CUL4; cullin 4
E NER4 complex
F CORT_0A09560 Rad7 protein K15082 RAD7; DNA repair protein RAD7
F CORT_0B09500 Rad16 protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F CORT_0D00190 Rpo21 protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F CORT_0B10440 RNA polymerase II subunit B150 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F CORT_0B00580 RNA polymerase II subunit B44 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F CORT_0B05210 Rpb4 protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F CORT_0D01360 Rpb5 protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F CORT_0C04170 Rpo26 RNA polymerase subunit K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F CORT_0B10420 Rpb7 protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F CORT_0D04130 Rpb8 subunit of RNA polymerases I, II, and III K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F CORT_0C05900 Rpb9 protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F CORT_0E01580 Rpb10 protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F CORT_0B11110 Rpb11 RNA polymerase II subunit K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F CORT_0G00520 Rpc10 RNA polymerase subunit ABC10-alpha of RNA polymerase complexes I, II, and III K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F CORT_0B04130 Hrt1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F CORT_0B05010 hypothetical protein K10609 CUL4; cullin 4
F CORT_0B03470 hypothetical protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F CORT_0G02160 Rad26 protein K10841 ERCC6; DNA excision repair protein ERCC-6
F CORT_0D06270 Elf1 protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E CORT_0A01110 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E CORT_0H00140 Rad3 protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E CORT_0E04310 Tfb1 protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E CORT_0A13430 RNA polymerase transcription factor TFIIH core component K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E CORT_0F03810 TFIIH complex subunit K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E CORT_0D04630 TFIIH and nucleotide excision repair factor 3 complex subunit K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E CORT_0D03910 Tfb5 protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E CORT_0A06400 serine/threonine protein kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E CORT_0B08040 Ccl1 protein K06634 CCNH; cyclin H
E CORT_0E05930 Tfb3 transcription factor isoforms A and B K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E CORT_0A12720 Rfa1 DNA replication factor A K07466 RFA1; replication factor A1
E CORT_0C06010 Rfa2 DNA replication factor A K10739 RFA2; replication factor A2
E CORT_0A03680 hypothetical protein K10740 RPA3; replication factor A3
D Other NER factors
E CORT_0G03320 Rad14 DNA repair protein K10847 XPA; DNA-repair protein complementing XP-A cells
E CORT_0B08760 Rad10 protein K10849 ERCC1; DNA excision repair protein ERCC-1
E CORT_0C03580 Rad1 single-stranded DNA endonuclease K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E CORT_0E03450 Rad2 protein K10846 ERCC5; DNA excision repair protein ERCC-5
E CORT_0B03610 Cdc9 protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E CORT_0D07250 Met18 protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E CORT_0A00430 hypothetical protein K03869 CUL3; cullin 3
E CORT_0B06420 Elc1 elongin C K03872 ELOC; elongin-C
E CORT_0B08470 Ela1 protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E CORT_0B00260 Msh2 DNA mismatch repair factor K08735 MSH2; DNA mismatch repair protein MSH2
E CORT_0C02620 Msh3 protein K08736 MSH3; DNA mismatch repair protein MSH3
E CORT_0A01850 Msh6 protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E CORT_0E01190 Mlh1 mismatch repair protein K08734 MLH1; DNA mismatch repair protein MLH1
E CORT_0C02880 Pms1 DNA mismatch repair factor K10858 PMS2; DNA mismatch repair protein PMS2
E CORT_0G00510 Mlh3 protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E CORT_0G02430 Pol3 large subunit of DNA polymerase III K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E CORT_0F01510 Hys2 DNA polymerase III (delta) subunit K02328 POLD2; DNA polymerase delta subunit 2
E CORT_0B08550 Pol32 protein K03504 POLD3; DNA polymerase delta subunit 3
D RPA (replication factor A)
E CORT_0A12720 Rfa1 DNA replication factor A K07466 RFA1; replication factor A1
E CORT_0C06010 Rfa2 DNA replication factor A K10739 RFA2; replication factor A2
E CORT_0A03680 hypothetical protein K10740 RPA3; replication factor A3
D RFC (replication factor C)
E CORT_0A08800 Rfc1 protein K10754 RFC1; replication factor C subunit 1
E CORT_0H00930 Rfc2 heteropentameric replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
E CORT_0D00170 Rfc4 heteropentameric replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
E CORT_0A12190 Rfc5 hypothetical proteineteropentameric replication factor C subunit K10756 RFC3_5; replication factor C subunit 3/5
E CORT_0B02420 Rcf3 heteropentameric replication factor C subunit K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E CORT_0E01250 Pol30 protein K04802 PCNA; proliferating cell nuclear antigen
E CORT_0E05870 Exo1 exodeoxyribonuclease K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E CORT_0B03610 Cdc9 protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E CORT_0H00510 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E CORT_0H00570 Mre11 DNA double-strand break repair factor K10865 MRE11; double-strand break repair protein MRE11
E CORT_0C01460 Rad50 DNA double-strand break repair factor K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E CORT_0H00570 Mre11 DNA double-strand break repair factor K10865 MRE11; double-strand break repair protein MRE11
E CORT_0C01460 Rad50 DNA double-strand break repair factor K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E CORT_0A01470 Rad51 protein K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E CORT_0A01470 Rad51 protein K04482 RAD51; DNA repair protein RAD51
E CORT_0C02920 Rad57 protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E CORT_0F04600 Rad52 protein K10873 RAD52; DNA repair and recombination protein RAD52
E CORT_0E03160 Rad59 protein K10959 RAD59; DNA repair protein RAD59
D Rad54 family proteins
E CORT_0D01580 Rad54 protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E CORT_0C07040 Rdh54 DNA-dependent ATPase K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E CORT_0C07310 Sgs1 RecQ-related DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E CORT_0C07310 Sgs1 RecQ-related DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E CORT_0C01660 Top3 protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E CORT_0C03570 Nce4 protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E CORT_0A12720 Rfa1 DNA replication factor A K07466 RFA1; replication factor A1
E CORT_0C06010 Rfa2 DNA replication factor A K10739 RFA2; replication factor A2
E CORT_0A03680 hypothetical protein K10740 RPA3; replication factor A3
D Protein phosphatase 4
E CORT_0D02580 Pph3 protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E CORT_0B07510 Psy2 protein phosphatase PP4 complex subunit K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E CORT_0A02380 Smc5 protein K22803 SMC5; structural maintenance of chromosomes protein 5
E CORT_0H00990 Smc6 structural maintenance of chromosomes (SMC) protein K22804 SMC6; structural maintenance of chromosomes protein 6
E CORT_0F01180 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E CORT_0C04200 Mms21 MMS21-SMC5-SMC6 complex component K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E CORT_0E04040 hypothetical protein K22823 NSMCE3; non-structural maintenance of chromosomes element 3
E CORT_0E01180 Nse4 protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E CORT_0F03940 Mms4 protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E CORT_0F04620 Mus81 protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E CORT_0A09290 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E CORT_0A07780 hypothetical protein K10991 SWI5; DNA repair protein Swi5/Sae3
E CORT_0D04610 Mei5 protein K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E CORT_0A00630 Yen1 protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E CORT_0C03720 Eaf3 subunit of the NuA4 histone acetyltransferase complex K11339 MORF4L1; mortality factor 4-like protein 1
E CORT_0D00970 Yta6 protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E CORT_0B04680 Wss1 protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E CORT_0E01920 Mph1 protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
E CORT_0A00410 hypothetical protein K26122 MMS22; E3 ubiquitin-protein ligase substrate receptor MMS22
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E CORT_0A04480 Cas1 transcription factor K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E CORT_0A02180 Yku80 Yku70p-Yku80p Ku complex subunit K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E CORT_0H00570 Mre11 DNA double-strand break repair factor K10865 MRE11; double-strand break repair protein MRE11
E CORT_0C01460 Rad50 DNA double-strand break repair factor K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E CORT_0A10510 Lig4 DNA ligase K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
D Other NHEJ factors
E CORT_0A02110 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CORT_0C07180 Pso2 DNA cross-link repair protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
E CORT_0C07310 Sgs1 RecQ-related DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E CORT_0C01660 Top3 protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E CORT_0C03570 Nce4 protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E CORT_0A01470 Rad51 protein K04482 RAD51; DNA repair protein RAD51
E CORT_0H00740 hypothetical protein K11137 TELO2; telomere length regulation protein
E CORT_0D01350 hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E CORT_0H00510 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D CORT_0A10780 Rad32 protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D CORT_0B01620 Rev1 protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D CORT_0C05210 Rev3 protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
D CORT_0C02870 hypothetical protein K03508 POLZ2; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D CORT_0G04090 Rad6 protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D CORT_0F03350 transcription factor K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D CORT_0A12750 Rad5 protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D CORT_0D01750 Mms2 protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D CORT_0E06140 Ubc13 protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D CORT_0E01250 Pol30 protein K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D CORT_0E02370 Rad17 protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D CORT_0E00170 Rad24 protein K06662 HRAD17; cell cycle checkpoint protein
D CORT_0H00930 Rfc2 heteropentameric replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
D CORT_0D00170 Rfc4 heteropentameric replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
D CORT_0A12190 Rfc5 hypothetical proteineteropentameric replication factor C subunit K10756 RFC3_5; replication factor C subunit 3/5
D CORT_0B02420 Rcf3 heteropentameric replication factor C subunit K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D CORT_0E02370 Rad17 protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
D CORT_0B05980 Mec3 DNA damage and meiotic pachytene checkpoint protein K02544 MEC3; G2-specific checkpoint protein
D CORT_0B04220 Ddc1 DNA damage checkpoint protein K06663 DDC1; DNA damage checkpoint protein
C FPC (fork protection complex)
D CORT_0B01750 Ybl053 protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D CORT_0B06070 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D CORT_0A07310 Gin1 protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D CORT_0H00740 hypothetical protein K11137 TELO2; telomere length regulation protein
D CORT_0B10050 Tti1 protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D CORT_0F00510 Get4 protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D CORT_0F02830 Tel1 protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D CORT_0B02820 Dun1 protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D CORT_0D06510 Mih1 protein phosphatase K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D CORT_0B09680 Bmh1 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D CORT_0D06760 Rad53 component of cell cycle checkpoint K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
D CORT_0F01330 Rad9 protein K06661 RAD9; DNA repair protein RAD9
D CORT_0B02390 Mec1 cell cycle checkpoint protein K02543 MEC1; cell cycle checkpoint protein MEC1
D CORT_0A11780 negative regulator of exit from mitosis K15081 AMN1; antagonist of mitotic exit network protein 1
D CORT_0G00960 Swe1 protein kinase K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D CORT_0D07370 Fkh2 forkhead transcription factor K24664 FKH; forkhead protein FKH
D CORT_0B02120 Vps4 protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
B Other factors with a suspected DNA repair function
C DNA polymerases
D CORT_0H02580 Pol5 DNA Polymerase phi K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D CORT_0B07610 Pso2 protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D CORT_0A02050 Dem1 mitochondrial exonuclease K17815 EXO5; exonuclease V [EC:3.1.-.-]
C Helicases
C PSO4 complex
D CORT_0C01210 Prp19 protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D CORT_0A06920 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D CORT_0D06870 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D CORT_0B08340 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CORT_0B10200 Dut1 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CORT_0A11030 Rnr1 large subunit of ribonucleotide reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D CORT_0D04620 Rnr3 ribonucleotide reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D CORT_0A11500 Rnr21 ribonucleoside-diphosphate reductase K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D CORT_0E04550 DNA repair methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E CORT_0C04030 Ung1 protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E CORT_0C06340 Mag1 protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E CORT_0F03300 Fpg1 Formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E CORT_0A06760 Ntg1 protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E CORT_0C05010 DNA repair helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E CORT_0C05010 DNA repair helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D CORT_0B08340 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CORT_0B10200 Dut1 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024