+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Carica papaya (papaya)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 110810374 mediator of RNA polymerase II transcription subunit 36a-like K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 110808208 nucleolar protein 56-like K14564 NOP56; nucleolar protein 56 D 110825651 probable nucleolar protein 5-2 K14565 NOP58; nucleolar protein 58 D 110825653 probable nucleolar protein 5-1 K14565 NOP58; nucleolar protein 58 D 110812736 NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 110824576 H/ACA ribonucleoprotein complex subunit 4-like K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 110806537 H/ACA ribonucleoprotein complex subunit 4-like K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 110823145 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 110807662 H/ACA ribonucleoprotein complex subunit 3-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 110816960 uncharacterized protein LOC110816960 isoform X1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 B 90S particles C U3 small nucleolar RNA-associated proteins D 110820143 U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 110814851 U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 110812589 U3 small nucleolar ribonucleoprotein protein MPP10 isoform X1 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 110810145 neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 110812990 LOW QUALITY PROTEIN: uncharacterized protein LOC110812990 K14545 RRP7; ribosomal RNA-processing protein 7 D 110821056 periodic tryptophan protein 2 K14558 PWP2; periodic tryptophan protein 2 D 110824067 nucleolar protein 14 isoform X1 K14766 NOP14; nucleolar protein 14 D 110809871 something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 110808440 U3 small nucleolar RNA-associated protein 4-like isoform X1 K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 110825874 WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 110821518 uncharacterized protein LOC110821518 isoform X1 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 110809733 U3 small nucleolar RNA-associated protein 7 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 110820475 uncharacterized protein At3g06530 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 110820476 uncharacterized protein At3g06530-like K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 110809846 LOW QUALITY PROTEIN: probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 110822759 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 110815974 transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 110826444 U3 small nucleolar RNA-associated protein 14 homolog A isoform X1 K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 110821525 protein SLOW WALKER 1 K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 110806677 U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 110813867 nucleolar complex protein 4 homolog B-like K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 110811974 U3 small nucleolar RNA-associated protein 20 K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 110811975 uncharacterized protein LOC110811975 isoform X1 K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 110812755 LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 21 homolog K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 110825567 WD repeat-containing protein 36-like K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 110822252 LOW QUALITY PROTEIN: nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 110812983 rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 110807080 rRNA-processing protein FCF1 homolog isoform X1 K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 110811628 U3 small nucleolar RNA-associated protein 25 isoform X1 K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 110810404 ribosomal L1 domain-containing protein 1-like K14775 UTP30; ribosome biogenesis protein UTP30 D 110808417 putative ribosome biogenesis protein C8F11.04 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 110810936 DEAD-box ATP-dependent RNA helicase 32 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 110820430 DEAD-box ATP-dependent RNA helicase 51 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 110808348 DEAD-box ATP-dependent RNA helicase 50 isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 110814315 DEAD-box ATP-dependent RNA helicase 10 isoform X1 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 110816988 DEAD-box ATP-dependent RNA helicase 36 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 110807502 DEAD-box ATP-dependent RNA helicase 57 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 110819424 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 110808099 ATP-dependent RNA helicase DEAH13 isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] C GTPase D 110821271 LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 110812333 RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 110812136 uncharacterized protein LOC110812136 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 110816301 lariat debranching enzyme isoform X1 K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 110818779 casein kinase II subunit alpha-2 isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 110822203 casein kinase II subunit alpha-2-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 110822226 casein kinase II subunit alpha-2-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 110810839 casein kinase II subunit beta-1-like isoform X1 K03115 CSNK2B; casein kinase II subunit beta D 110810869 casein kinase II subunit beta-2-like K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 110822583 ribosomal RNA small subunit methyltransferase NEP1-like K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 110812141 ribosomal RNA small subunit methyltransferase NEP1-like K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 110808972 pre-rRNA-processing protein ESF2 K14785 ESF2; ESF2/ABP1 family protein D 110822650 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 110806896 multiple RNA-binding domain-containing protein 1 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 110820227 RNA cytidine acetyltransferase 1-like K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 110807122 nucleolin 1-like isoform X1 K11294 NCL; nucleolin D 110818479 LOW QUALITY PROTEIN: pumilio homolog 23 K14790 NOP9; nucleolar protein 9 D 110819122 uncharacterized protein LOC110819122 K11135 PINX1; Pin2-interacting protein X1 D 110811457 LOW QUALITY PROTEIN: periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 110814213 probable RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 110811658 rRNA biogenesis protein RRP5 isoform X1 K14792 RRP5; rRNA biogenesis protein RRP5 D 110819348 U3 snoRNP-associated protein-like EMB2271 K14793 RRP9; ribosomal RNA-processing protein 9 D 110817291 RRP12-like protein isoform X1 K14794 RRP12; ribosomal RNA-processing protein 12 D 110817087 ribosomal RNA-processing protein 12 K14794 RRP12; ribosomal RNA-processing protein 12 D 110814553 ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 110811985 DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 110826276 serine/threonine-protein kinase RIO1-like K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 110821311 serine/threonine-protein kinase rio2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 110806426 ribosomal RNA small subunit methyltransferase, mitochondrial K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 110818022 ribosomal RNA small subunit methyltransferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 110811122 probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 110820875 methyltransferase-like protein 5 isoform X1 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 110814501 LOW QUALITY PROTEIN: bystin K14797 ENP1; essential nuclear protein 1 D 110808482 protein LTV1 homolog isoform X1 K14798 LTV1; protein LTV1 D 110812372 protein LTV1-like K14798 LTV1; protein LTV1 D 110808288 protein LTV1 homolog isoform X1 K14798 LTV1; protein LTV1 D 110806653 uncharacterized protein LOC110806653 K11883 NOB1; RNA-binding protein NOB1 D 110819399 RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1 D 110823537 GTP-binding nuclear protein Ran1B-like K07936 RAN; GTP-binding nuclear protein Ran D 110812675 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran D 110821734 adenylate kinase isoenzyme 6 homolog isoform X1 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 110818102 pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 110820433 pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2 D 110809907 pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2 D 110813890 ribosome biogenesis protein TSR3 homolog K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 110806913 programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4 D 110808152 programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 110816351 protein EXPORTIN 1A K14290 XPO1; exportin-1 D 110809492 importin subunit beta-1-like K14293 KPNB1; importin subunit beta-1 D 110823225 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 110819074 transportin-1 K18752 TNPO1; transportin-1 D 110816319 importin-4 K20221 IPO4; importin-4 D 110826230 importin subunit beta-3-like K20222 IPO5; importin-5 D 110815022 importin beta-like SAD2 K20223 IPO7; importin-7 D 110824014 importin-9 K20224 IPO9; importin-9 C Other pre-40S particles D 110822853 phospholipid-transporting ATPase 3 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 110810156 phospholipid-transporting ATPase 1-like K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 110814508 LOW QUALITY PROTEIN: phospholipid-transporting ATPase 1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 110811603 phospholipid-transporting ATPase 1-like K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 110807266 eukaryotic translation initiation factor 3 subunit J-like K03245 EIF3J; translation initiation factor 3 subunit J D 110807636 probable protein phosphatase 2C 28 isoform X1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 110815723 probable protein phosphatase 2C 27 isoform X1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 110808327 LOW QUALITY PROTEIN: probable protein phosphatase 2C 13 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 110822157 probable protein phosphatase 2C 47 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 110819753 ABC transporter E family member 2-like K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D 110825794 ABC transporter E family member 2 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 110818392 DEAD-box ATP-dependent RNA helicase 20 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 110822380 DEAD-box ATP-dependent RNA helicase 14-like K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 110810117 DEAD-box ATP-dependent RNA helicase 30 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 110808362 DEAD-box ATP-dependent RNA helicase 46 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 110823708 DEAD-box ATP-dependent RNA helicase 20-like K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 110820430 DEAD-box ATP-dependent RNA helicase 51 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 110808348 DEAD-box ATP-dependent RNA helicase 50 isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 110823148 DEAD-box ATP-dependent RNA helicase 7 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 110811489 DEAD-box ATP-dependent RNA helicase 13-like K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 110817478 DEAD-box ATP-dependent RNA helicase 28 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 110819185 DEAD-box ATP-dependent RNA helicase 17 isoform X1 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 110819762 LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 1 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 110818019 putative DEAD-box ATP-dependent RNA helicase 29 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 110819152 DEAD-box ATP-dependent RNA helicase 18 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 110809296 DEAD-box ATP-dependent RNA helicase 16 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D 110819887 DEAD-box ATP-dependent RNA helicase 5 K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7] D 110807370 DExH-box ATP-dependent RNA helicase DExH9 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D 110809808 LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 110821810 LOW QUALITY PROTEIN: guanine nucleotide-binding protein-like NSN1 K14538 NUG1; nuclear GTP-binding protein D 110812267 nuclear/nucleolar GTPase 2 K14537 NUG2; nuclear GTP-binding protein D 110811818 LOW QUALITY PROTEIN: nucleolar GTP-binding protein 1-like K06943 NOG1; nucleolar GTP-binding protein D 110824890 LOW QUALITY PROTEIN: nucleolar GTP-binding protein 1-like K06943 NOG1; nucleolar GTP-binding protein D 110814718 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D 110808407 LOW QUALITY PROTEIN: nucleolar GTP-binding protein 1-like K06943 NOG1; nucleolar GTP-binding protein D 110824580 LOW QUALITY PROTEIN: nucleolar GTP-binding protein 1-like K06943 NOG1; nucleolar GTP-binding protein D 110810682 GTPase LSG1-2-like K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 110810671 LOW QUALITY PROTEIN: elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 110816866 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D 110814354 small RNA degrading nuclease 1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 110818035 small RNA degrading nuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D RNase MRP E 110819444 ribonucleases P/MRP protein subunit POP1 isoform X1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 110815800 uncharacterized protein LOC110815800 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 110823346 probable ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 110808593 LOW QUALITY PROTEIN: uncharacterized protein LOC110808593 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases D 110817424 polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 110824063 LOW QUALITY PROTEIN: ABC transporter F family member 1 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 110811164 LOW QUALITY PROTEIN: DNAJ protein JJJ1 homolog K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 110815482 eukaryotic translation initiation factor 6-2-like K03264 EIF6; translation initiation factor 6 D 110822188 eukaryotic translation initiation factor 6-2 isoform X1 K03264 EIF6; translation initiation factor 6 D 110815703 heat shock 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 110826210 heat shock cognate 70 kDa protein 2-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 110809920 heat shock 70 kDa protein 6, chloroplastic K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 110824174 heat shock cognate 70 kDa protein 2 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 110819681 heat shock 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 110823568 mRNA turnover protein 4 homolog isoform X1 K14815 MRT4; mRNA turnover protein 4 D 110809723 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D 110823537 GTP-binding nuclear protein Ran1B-like K07936 RAN; GTP-binding nuclear protein Ran D 110812675 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran D 110818639 cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 isoform X1 K14816 REI1; pre-60S factor REI1 D 110820555 ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 110816351 protein EXPORTIN 1A K14290 XPO1; exportin-1 D 110809492 importin subunit beta-1-like K14293 KPNB1; importin subunit beta-1 D 110823225 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 110819074 transportin-1 K18752 TNPO1; transportin-1 D 110816319 importin-4 K20221 IPO4; importin-4 D 110826230 importin subunit beta-3-like K20222 IPO5; importin-5 D 110815022 importin beta-like SAD2 K20223 IPO7; importin-7 D 110824014 importin-9 K20224 IPO9; importin-9 D 110811242 dual specificity protein phosphatase 12-like isoform X1 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] D 110806571 probable inactive dual specificity protein phosphatase-like At4g18593 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 110810555 uncharacterized protein LOC110810555 K14827 IPI1; pre-rRNA-processing protein IPI1 D 110812526 protein ROOT INITIATION DEFECTIVE 3-like K14829 IPI3; pre-rRNA-processing protein IPI3 D 110813430 protein ROOT INITIATION DEFECTIVE 3 K14829 IPI3; pre-rRNA-processing protein IPI3 D 110820358 protein ROOT INITIATION DEFECTIVE 3-like K14829 IPI3; pre-rRNA-processing protein IPI3 D 110825740 uncharacterized protein LOC110825740 K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D 110823686 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 110813860 transcription factor 25 K24970 TCF25; transcription factor 25 D 110808328 nuclear export mediator factor NEMF-like K24971 NEMF; nuclear export mediator factor NEMF D 110814218 LOW QUALITY PROTEIN: cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase D 110821344 NPL4-like protein 1 isoform X1 K14015 NPLOC4; nuclear protein localization protein 4 D 110812186 ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1 D 110808218 ubiquitin recognition factor in ER-associated degradation protein 1-like K14016 UFD1; ubiquitin fusion degradation protein 1 D 110818590 putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] D 110819580 ankyrin repeat and zinc finger domain-containing protein 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 110812291 ribosome biogenesis protein BRX1 homolog 2 K14820 BRX1; ribosome biogenesis protein BRX1 D 110810754 zinc finger protein 593 homolog K14821 BUD20; bud site selection protein 20 D 110823514 probable rRNA-processing protein EBP2 homolog K14823 EBP2; rRNA-processing protein EBP2 D 110819455 ribosome biogenesis protein BOP1 homolog K14824 ERB1; ribosome biogenesis protein ERB1 D 110820083 peptidyl-prolyl cis-trans isomerase FKBP43-like isoform X1 K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D 110819758 LOW QUALITY PROTEIN: p21-activated protein kinase-interacting protein 1-like K14830 MAK11; protein MAK11 D 110817198 protein MAK16 homolog A K14831 MAK16; protein MAK16 D 110818475 CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21 D 110817356 midasin-like K14572 MDN1; midasin D 110820000 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 110814611 nucleolar complex protein 2 homolog isoform X1 K14833 NOC2; nucleolar complex protein 2 D 110807947 LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 110823034 nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 110820656 25S rRNA (cytosine-C(5))-methyltransferase nop2-like K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 110808185 RNA-binding protein 28 K14573 NOP4; nucleolar protein 4 D 110825654 RNA-binding protein 34 K14837 NOP12; nucleolar protein 12 D 110809119 uncharacterized RNA-binding protein C1827.05c K14838 NOP15; nucleolar protein 15 D 110821213 uncharacterized protein LOC110821213 K14839 NOP16; nucleolar protein 16 D 110819261 ribosome biogenesis protein NOP53 K14840 NOP53; nucleolar protein 53 D 110807593 WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 110810626 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 110810205 pescadillo homolog K14843 PES1; pescadillo D 110821461 pumilio homolog 24 isoform X1 K14844 PUF6; pumilio homology domain family member 6 D 110811457 LOW QUALITY PROTEIN: periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 110810867 decapping nuclease DXO homolog, chloroplastic-like K14845 RAI1; RAT1-interacting protein D 110824329 cell division control protein 48 homolog C-like K14571 RIX7; ribosome biogenesis ATPase D 110811044 cell division control protein 48 homolog C-like isoform X1 K14571 RIX7; ribosome biogenesis ATPase D 110825405 ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 110810105 ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 110811988 glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1 D 110809836 LOW QUALITY PROTEIN: ribosomal RNA processing protein 1 homolog K14849 RRP1; ribosomal RNA-processing protein 1 D 110825755 ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 110817291 RRP12-like protein isoform X1 K14794 RRP12; ribosomal RNA-processing protein 12 D 110817087 ribosomal RNA-processing protein 12 K14794 RRP12; ribosomal RNA-processing protein 12 D 110817738 uncharacterized protein LOC110817738 K14851 RRP17; ribosomal RNA-processing protein 17 D 110812295 ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 110819140 notchless protein homolog K14855 RSA4; ribosome assembly protein 4 D 110817152 protein SDA1 homolog K14856 SDA1; protein SDA1 D 110825471 adoMet-dependent rRNA methyltransferase spb1-like K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 110813730 putative rRNA methyltransferase K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 110819984 peter Pan-like protein K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 110818453 uncharacterized protein LOC110818453 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 110820156 ribosome biogenesis protein WDR12 homolog isoform X1 K14863 WDR12; ribosome biogenesis protein D 110821725 zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 110813515 protein BCCIP homolog K15262 BCP1; protein BCP1 C 110823668 protein BCCIP homolog K15262 BCP1; protein BCP1 C 110817721 UBP1-associated proteins 1C isoform X1 K15263 LYER; cell growth-regulating nucleolar protein C 110809249 probable 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 110816284 rRNA methyltransferase 1, mitochondrial K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 110811203 DNA-binding protein SMUBP-2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 110817370 GTP-binding protein ERG-like K03595 era; GTPase C 110809826 GTP-binding protein ERG-like K03595 era; GTPase C 110822383 LOW QUALITY PROTEIN: uncharacterized protein LOC110822383 K03595 era; GTPase C 110825730 uncharacterized protein LOC110825730 K26142 NOPCHAP1; NOP protein chaperone 1 C 110809494 LOW QUALITY PROTEIN: ERBB-3 BINDING PROTEIN 1 K26736 PA2G4; ERBB-3 binding protein C 110825150 DAR GTPase 3, chloroplastic K19828 MTG1; mitochondrial GTPase 1 C 110825382 short integuments 2, mitochondrial K19828 MTG1; mitochondrial GTPase 1 C 110808717 LOW QUALITY PROTEIN: DAR GTPase 2, mitochondrial K19828 MTG1; mitochondrial GTPase 1 C 110823388 NO-associated protein 1, chloroplastic/mitochondrial K13427 NOA1; nitric-oxide synthase, plant [EC:1.14.13.39] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 110808208 nucleolar protein 56-like K14564 NOP56; nucleolar protein 56 D 110824882 60S ribosomal protein L7a-1-like K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D 110821493 60S ribosomal protein L7a-1 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 110824576 H/ACA ribonucleoprotein complex subunit 4-like K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 110806537 H/ACA ribonucleoprotein complex subunit 4-like K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 110807662 H/ACA ribonucleoprotein complex subunit 3-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors D 110820603 uncharacterized protein LOC110820603 isoform X1 K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D 110816851 uncharacterized protein LOC110816851 isoform X1 K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D 110809646 LOW QUALITY PROTEIN: uncharacterized protein LOC110809646 K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D 110810797 uncharacterized protein LOC110810797 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D 110821606 uncharacterized protein LOC110821606 K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D 110821003 putative RNA methyltransferase At5g10620 isoform X1 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D 110824287 uncharacterized protein LOC110824287 K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D 110813106 uncharacterized protein LOC110813106 K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D 110821606 uncharacterized protein LOC110821606 K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D 110818058 RNA pseudouridine synthase 2, chloroplastic K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors B rRNA processing factors C 110818393 uncharacterized protein LOC110818393 isoform X1 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases B GTPases C 110817370 GTP-binding protein ERG-like K03595 era; GTPase C 110809826 GTP-binding protein ERG-like K03595 era; GTPase C 110822383 LOW QUALITY PROTEIN: uncharacterized protein LOC110822383 K03595 era; GTPase C 110825808 LOW QUALITY PROTEIN: small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C 110808479 uncharacterized protein LOC110808479 K03665 hflX; GTPase B Other maturation factors C 110806469 yrdC domain-containing protein, mitochondrial isoform X1 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C 110808173 probable ribosome-binding factor A, chloroplastic K02834 rbfA; ribosome-binding factor A C 110808206 uncharacterized protein LOC110808206 K07574 yhbY; RNA-binding protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024