+D GENES KO #

  KEGG Orthology (KO) - Clostridium pasteurianum BC1

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cpas00010] D Clopa_3905 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3927 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3919 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_4421 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_1401 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_4020 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_3574 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1337 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1831 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clopa_3420 hypothetical protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Clopa_3783 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Clopa_1251 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clopa_3634 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clopa_3636 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clopa_3635 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clopa_1319 phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clopa_3633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clopa_3632 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clopa_3573 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_3255 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_0640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_2212 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clopa_2984 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_2985 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_3689 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clopa_3688 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clopa_4803 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_2980 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_1347 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1400 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1767 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clopa_3053 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_0885 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_3496 NAD-dependent aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D Clopa_3914 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_3915 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_0195 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_2088 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_2997 PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:cpas00020] D Clopa_3429 isopropylmalate/homocitrate/citramalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Clopa_3428 aconitate hydratase, putative, Aquifex type K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Clopa_3427 isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D Clopa_3689 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clopa_3688 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clopa_3687 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clopa_3690 hypothetical protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clopa_4472 hydro-lyase, Fe-S type, tartrate/fumarate subfamily K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Clopa_4471 hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Clopa_4405 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Clopa_2984 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_2985 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:cpas00030] D Clopa_4421 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_1401 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_4028 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clopa_2457 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clopa_4401 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_3603 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_3604 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_4030 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_4031 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_0950 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_0951 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_4235 fructose-6-phosphate aldolase, TalC/MipB family K00616 TALDO1; transaldolase [EC:2.2.1.2] D Clopa_3620 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Clopa_3966 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_4021 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_0387 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_0948 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_3802 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Clopa_2720 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Clopa_3053 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_0885 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_4592 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clopa_1111 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clopa_4878 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Clopa_0712 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Clopa_3496 NAD-dependent aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D Clopa_4676 lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Clopa_4877 sugar kinase, ribokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Clopa_2301 sugar kinase, ribokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Clopa_3783 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Clopa_1251 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clopa_1831 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clopa_3420 hypothetical protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Clopa_4020 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_3574 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1337 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:cpas00040] D Clopa_4223 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D Clopa_1615 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Clopa_4711 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Clopa_0819 altronate dehydratase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D Clopa_0820 altronate dehydratase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D Clopa_4710 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Clopa_1610 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Clopa_0855 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clopa_0443 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clopa_3051 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0875 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0882 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0918 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_1614 malate/lactate dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D Clopa_3763 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Clopa_4028 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clopa_2457 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clopa_3681 pentulose/hexulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Clopa_4029 theronine dehydrogenase-like Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Clopa_2089 theronine dehydrogenase-like Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Clopa_0817 dihydrodipicolinate synthase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] C 00051 Fructose and mannose metabolism [PATH:cpas00051] D Clopa_4072 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Clopa_3443 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clopa_0264 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Clopa_4412 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clopa_0848 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clopa_3785 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clopa_4020 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_3574 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1337 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1831 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clopa_3420 hypothetical protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Clopa_1399 mannitol-1-phosphate/altronate dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D Clopa_1338 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D Clopa_1402 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D Clopa_1343 theronine dehydrogenase-like Zn-dependent dehydrogenase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D Clopa_4843 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Clopa_4029 theronine dehydrogenase-like Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Clopa_2089 theronine dehydrogenase-like Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Clopa_3783 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Clopa_1251 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clopa_3634 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clopa_0908 beta-fructosidase, levanase/invertase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] D Clopa_3966 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_4021 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_0387 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_0948 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_4842 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIA component/PTS system, fructose subfamily, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Clopa_4466 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Clopa_4461 PTS system, mannose/fructose/sorbose family, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Clopa_3925 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Clopa_4460 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Clopa_3924 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Clopa_4459 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component D Clopa_3923 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component D Clopa_3910 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component D Clopa_4458 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component D Clopa_3922 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID K02796 manZ; mannose PTS system EIID component D Clopa_3909 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID K02796 manZ; mannose PTS system EIID component D Clopa_1398 mannitol/fructose-specific phosphotransferase system, IIA domain protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D Clopa_1396 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D Clopa_1406 phosphotransferase system sorbitol-specific component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Clopa_1405 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Clopa_1404 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D Clopa_1339 PTS system, mannose/fructose/sorbose family, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D Clopa_1340 PTS system, mannose/fructose/sorbose family, IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D Clopa_1341 PTS system, mannose/fructose/sorbose family, IIC component K02814 sorA; sorbose PTS system EIIC component D Clopa_1342 PTS system, mannose/fructose/sorbose family, IID component K02815 sorM; sorbose PTS system EIID component C 00052 Galactose metabolism [PATH:cpas00052] D Clopa_0706 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Clopa_4335 galactose-1-phosphate uridylyltransferase, family 1 K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Clopa_0702 galactose-1-phosphate uridylyltransferase, family 2 K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Clopa_0707 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_0830 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_4076 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_3051 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0875 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0882 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0918 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_3053 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_0885 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_3905 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3927 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3919 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_0694 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Clopa_0713 phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D Clopa_3766 phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D Clopa_0714 phosphotransferase system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D Clopa_3765 phosphotransferase system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D Clopa_3764 phosphotransferase system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D Clopa_0715 phosphotransferase system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D Clopa_4020 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_3574 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1337 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_0716 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D Clopa_3997 beta-fructosidase, levanase/invertase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D Clopa_1030 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D Clopa_3897 family 31 glycosyl hydrolase, alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Clopa_3902 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Clopa_3906 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3921 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3926 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3928 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3933 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3757 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3912 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] C 00053 Ascorbate and aldarate metabolism [PATH:cpas00053] D Clopa_0855 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clopa_0443 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clopa_3763 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Clopa_1614 malate/lactate dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:cpas00500] D Clopa_1029 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Clopa_3997 beta-fructosidase, levanase/invertase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D Clopa_1030 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D Clopa_3897 family 31 glycosyl hydrolase, alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Clopa_3902 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Clopa_4677 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_4678 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_4679 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_3796 beta-fructosidase, levanase/invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_4680 beta-fructosidase, levanase/invertase K01212 sacC; levanase [EC:3.2.1.65] D Clopa_0615 beta-fructosidase, levanase/invertase K01212 sacC; levanase [EC:3.2.1.65] D Clopa_3904 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D Clopa_3051 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0875 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0882 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0918 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_1145 phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D Clopa_1143 phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D Clopa_1144 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D Clopa_3076 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Clopa_2381 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clopa_2382 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clopa_2380 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Clopa_3223 glycosyltransferase K16150 K16150; glycogen synthase [EC:2.4.1.11] D Clopa_3174 hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Clopa_2395 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Clopa_1441 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D Clopa_3943 glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Clopa_2610 glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Clopa_3906 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3921 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3926 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3928 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3933 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3757 glycosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Clopa_3941 putative carbohydrate binding protein K05988 dexA; dextranase [EC:3.2.1.11] D Clopa_3944 trehalose/maltose hydrolase or phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8] D Clopa_3945 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D Clopa_3914 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_3915 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_0195 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_2088 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_2086 PTS system, alpha-glucoside-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Clopa_3918 PTS system, glucose-like IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Clopa_3917 family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D Clopa_3684 family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D Clopa_2087 family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D Clopa_0496 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D Clopa_0495 alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D Clopa_3053 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_0885 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_3905 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3927 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3919 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_4421 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_1401 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_4072 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpas00520] D Clopa_3914 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_3915 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_0195 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_2088 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_0656 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Clopa_4072 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Clopa_1348 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clopa_4440 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Clopa_4593 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Clopa_4376 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clopa_4782 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clopa_3582 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clopa_4388 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clopa_4712 putative dehydrogenase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Clopa_2997 PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D Clopa_3905 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3927 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3919 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3053 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_0885 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_3051 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0875 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0882 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0918 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0855 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clopa_0443 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clopa_0781 nucleoside-diphosphate-sugar epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D Clopa_0706 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Clopa_4335 galactose-1-phosphate uridylyltransferase, family 1 K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Clopa_0702 galactose-1-phosphate uridylyltransferase, family 2 K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Clopa_0707 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_0830 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_4076 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_4461 PTS system, mannose/fructose/sorbose family, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Clopa_3925 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Clopa_4460 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Clopa_3924 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Clopa_4459 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component D Clopa_3923 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component D Clopa_3910 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component D Clopa_4458 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component D Clopa_3922 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID K02796 manZ; mannose PTS system EIID component D Clopa_3909 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID K02796 manZ; mannose PTS system EIID component D Clopa_4421 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_1401 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_3443 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clopa_0264 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Clopa_3785 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clopa_4412 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clopa_0848 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clopa_3076 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Clopa_3073 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Clopa_2381 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clopa_2382 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cpas00620] D Clopa_2984 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_2985 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_3689 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clopa_3688 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clopa_0161 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Clopa_1347 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1400 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1767 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_2470 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clopa_2469 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clopa_3573 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_3255 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_0640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_4804 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Clopa_4808 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Clopa_4806 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Clopa_4805 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Clopa_2355 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clopa_3664 FAD/FMN-dependent dehydrogenase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436] D Clopa_3349 FAD/FMN-dependent dehydrogenase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436] D Clopa_3350 electron transfer flavoprotein, alpha subunit K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC D Clopa_3351 electron transfer flavoprotein, beta subunit K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB D Clopa_4803 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_2980 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_4262 aldo/keto reductase, diketogulonate reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] D Clopa_1102 lactoylglutathione lyase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Clopa_1658 lactoylglutathione lyase-like lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Clopa_2333 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Clopa_3953 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Clopa_3455 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1] D Clopa_4785 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1] D Clopa_4676 lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Clopa_2033 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Clopa_4405 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Clopa_4472 hydro-lyase, Fe-S type, tartrate/fumarate subfamily K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Clopa_4471 hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Clopa_2212 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3987 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Clopa_1748 isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Clopa_3457 hypothetical protein K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] D Clopa_3456 isopropylmalate/homocitrate/citramalate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpas00630] D Clopa_3428 aconitate hydratase, putative, Aquifex type K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_0741 catalase K03781 katE; catalase [EC:1.11.1.6] D Clopa_4676 lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Clopa_2367 haloacid dehalogenase superfamily enzyme, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Clopa_0418 haloacid dehalogenase superfamily enzyme, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Clopa_4623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clopa_2339 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clopa_3672 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clopa_4878 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Clopa_0712 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:cpas00640] D Clopa_2470 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clopa_2469 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clopa_0161 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Clopa_1420 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clopa_4804 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Clopa_4808 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Clopa_4806 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Clopa_4805 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Clopa_1050 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K25571 pydD; beta-alanine---2-oxoglutarate transaminase [EC:2.6.1.120] D Clopa_4803 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_2980 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_3454 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D Clopa_4670 glycerol dehydrogenase-like oxidoreductase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Clopa_4016 glycerol dehydrogenase-like oxidoreductase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Clopa_4262 aldo/keto reductase, diketogulonate reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] C 00650 Butanoate metabolism [PATH:cpas00650] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_1423 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Clopa_1419 enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D Clopa_1420 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clopa_3224 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Clopa_1768 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Clopa_1769 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Clopa_4447 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Clopa_4448 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Clopa_1347 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1400 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1767 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_2874 Fe-dependent oxidoreductase, alcohol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-] D Clopa_0605 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Clopa_4032 alcohol dehydrogenase, class IV K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D Clopa_4274 alcohol dehydrogenase, class IV K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D Clopa_4007 acetyl-CoA hydrolase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-] D Clopa_4009 aromatic ring hydroxylase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D Clopa_0161 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Clopa_2984 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_2985 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_3689 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clopa_3688 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clopa_1770 acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4] D Clopa_1771 theronine dehydrogenase-like Zn-dependent dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80] D Clopa_4275 thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_2225 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_1298 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_1299 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:cpas00660] D Clopa_4275 thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_2225 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_1298 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_1299 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clopa_2227 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Clopa_2228 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Clopa_2229 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cpas00562] D Clopa_3296 Zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] D Clopa_3634 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cpas00190] D Clopa_2005 NADH:ubiquinone oxidoreductase subunit 3 (chain A) K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Clopa_2006 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Clopa_2007 NADH:ubiquinone oxidoreductase 27 kD subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Clopa_2008 NADH:ubiquinone oxidoreductase 49 kD subunit 7 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Clopa_4234 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Clopa_2009 NADH:ubiquinone oxidoreductase subunit 1 (chain H) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Clopa_2010 NADH:ubiquinone oxidoreductase chain I-like protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Clopa_2013 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Clopa_2014 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Clopa_2015 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Clopa_2012 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2] D Clopa_4381 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Clopa_4379 ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Clopa_4380 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Clopa_4382 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Clopa_4378 ATP synthase, F1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Clopa_4385 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Clopa_4383 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Clopa_4384 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Clopa_2913 inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D Clopa_3244 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:cpas00710] D Clopa_3635 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clopa_3636 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clopa_3783 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Clopa_1251 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clopa_1831 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clopa_3420 hypothetical protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Clopa_4401 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_3603 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_3604 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_4030 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_4031 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_0950 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_0951 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_3620 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Clopa_3966 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_4021 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_0387 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_0948 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clopa_3634 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clopa_4028 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clopa_2457 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clopa_4235 fructose-6-phosphate aldolase, TalC/MipB family K00616 TALDO1; transaldolase [EC:2.2.1.2] D Clopa_2212 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:cpas00720] D Clopa_2984 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_2985 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clopa_2212 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clopa_4405 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Clopa_4472 hydro-lyase, Fe-S type, tartrate/fumarate subfamily K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Clopa_4471 hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Clopa_4009 aromatic ring hydroxylase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3689 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clopa_3688 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clopa_3687 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clopa_3690 hypothetical protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clopa_3428 aconitate hydratase, putative, Aquifex type K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Clopa_4804 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Clopa_4808 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Clopa_4806 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Clopa_4805 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Clopa_0987 formate dehydrogenase, alpha subunit, archaeal-type K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D Clopa_0990 Fe-S-cluster-containing hydrogenase subunit K25124 hycB; FeS-containing electron transfer protein D Clopa_0991 Fe-S-cluster-containing hydrogenase subunit K25124 hycB; FeS-containing electron transfer protein D Clopa_4564 formyltetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Clopa_2832 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Clopa_3023 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Clopa_4821 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Clopa_0057 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_1484 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_2128 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_3232 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_1483 Fe-S-cluster-containing hydrogenase subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Clopa_2469 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clopa_2470 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:cpas00680] D Clopa_0987 formate dehydrogenase, alpha subunit, archaeal-type K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D Clopa_0990 Fe-S-cluster-containing hydrogenase subunit K25124 hycB; FeS-containing electron transfer protein D Clopa_0991 Fe-S-cluster-containing hydrogenase subunit K25124 hycB; FeS-containing electron transfer protein D Clopa_0057 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_1484 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_2128 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_3232 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_1483 Fe-S-cluster-containing hydrogenase subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Clopa_2339 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clopa_3632 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clopa_3783 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Clopa_1251 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clopa_1831 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clopa_3420 hypothetical protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Clopa_4020 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_3574 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1337 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_2470 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clopa_2469 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clopa_1319 phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clopa_3633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clopa_4720 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clopa_0018 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clopa_2035 fructose-2,6-bisphosphatase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Clopa_4611 phosphosulfolactate phosphohydrolase-like enzyme K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D Clopa_1152 malate/lactate dehydrogenase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337] C 00910 Nitrogen metabolism [PATH:cpas00910] D Clopa_4268 sulfite reductase, beta subunit (hemoprotein) K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1] D Clopa_4707 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4237 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4845 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_2358 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4189 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4213 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_1023 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4170 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4182 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_3463 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_2678 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_2126 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4846 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4238 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4706 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_3462 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_2677 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_2359 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4188 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4212 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_1024 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_1025 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4134 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4181 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_2127 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_3474 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_3464 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_3465 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_1056 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_4148 nitrogenase subunit NifH (ATPase) K02588 nifH; nitrogenase iron protein NifH D Clopa_4183 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_3473 nitrogenase vanadium-iron protein, alpha chain K22896 vnfD; vanadium-dependent nitrogenase alpha chain [EC:1.18.6.2] D Clopa_3471 nitrogenase molybdenum-iron protein, alpha and beta chains K22897 vnfK; vanadium-dependent nitrogenase beta chain [EC:1.18.6.2] D Clopa_3472 Vanadium/alternative nitrogenase delta subunit K22898 vnfG; vanadium nitrogenase delta subunit [EC:1.18.6.2] D Clopa_2304 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Clopa_4409 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Clopa_4815 2-nitropropane dioxygenase-like enzyme K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Clopa_4623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clopa_2400 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Clopa_2401 NADH/NADPH-dependent glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Clopa_1425 NADPH-dependent glutamate synthase, homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Clopa_1665 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cpas00920] D Clopa_3719 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4139 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4155 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_1150 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4345 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_3692 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_3718 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_4138 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_1147 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_4343 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_3691 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_1148 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_3717 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_4137 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_4344 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_3694 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_4340 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clopa_4341 PAPS reductase/FAD synthetase family protein K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clopa_4348 adenylylsulfate kinase ApsK K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Clopa_4347 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D Clopa_4346 ferredoxin K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D Clopa_4350 sulfite reductase, beta subunit (hemoprotein) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D Clopa_1274 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clopa_0866 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clopa_0445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clopa_4043 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_3188 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_4192 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_4205 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_0533 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_1757 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_1616 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Clopa_4417 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Clopa_1663 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cpas00061] D Clopa_4804 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Clopa_4808 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Clopa_4806 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Clopa_4805 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Clopa_4014 acyl carrier protein K02078 acpP; acyl carrier protein D Clopa_2474 acyl carrier protein K02078 acpP; acyl carrier protein D Clopa_4811 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clopa_4813 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clopa_4809 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clopa_2116 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clopa_4810 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4260 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_1653 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_0961 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4160 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_1525 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4807 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clopa_4812 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Clopa_3224 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Clopa_4013 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_2103 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cpas00071] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_1420 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clopa_4013 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_2103 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_1347 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1400 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1767 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cpas00561] D Clopa_3672 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clopa_3762 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D Clopa_3761 dihydroxyacetone kinase, phosphoprotein-dependent, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D Clopa_4670 glycerol dehydrogenase-like oxidoreductase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Clopa_4016 glycerol dehydrogenase-like oxidoreductase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Clopa_0922 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clopa_2473 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clopa_1276 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clopa_3430 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clopa_2206 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Clopa_0369 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_1266 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_4085 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_2231 phosphoglycerol transferase family protein, alkaline phosphatase superfamily K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Clopa_0781 nucleoside-diphosphate-sugar epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D Clopa_0694 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:cpas00564] D Clopa_2440 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Clopa_0923 putative dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Clopa_2144 putative dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Clopa_1276 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clopa_3430 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clopa_2206 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Clopa_3296 Zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] D Clopa_0691 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Clopa_3835 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Clopa_2582 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Clopa_1257 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Clopa_0059 phosphatidylserine decarboxylase precursor K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Clopa_0970 phosphatidylserine synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Clopa_2603 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Clopa_0486 phosphatidylglycerophosphate synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Clopa_1321 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Clopa_4395 glycerol dehydrogenase-like oxidoreductase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] C 00565 Ether lipid metabolism D Clopa_3296 Zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:cpas00600] D Clopa_0694 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D Clopa_2656 lysophospholipase L1-like esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cpas00230] D Clopa_2724 NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Clopa_0938 NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Clopa_2720 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Clopa_3053 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_0885 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_4592 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clopa_1111 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clopa_2053 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clopa_2057 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Clopa_2055 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Clopa_2050 phosphoribosylformylglycinamidine synthase, clade II K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Clopa_2054 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Clopa_2051 phosphoribosylaminoimidazole carboxylase, PurE protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Clopa_2052 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Clopa_2611 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Clopa_0497 AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clopa_2056 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clopa_2691 IMP cyclohydrolase-like protein K11176 purO; IMP cyclohydrolase [EC:3.5.4.10] D Clopa_2331 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clopa_4158 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clopa_3896 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Clopa_4042 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Clopa_2719 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clopa_2718 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clopa_3674 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Clopa_2429 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Clopa_4566 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Clopa_0420 IMP dehydrogenase/GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clopa_1431 inosine-5''-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clopa_3335 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Clopa_1456 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Clopa_3279 xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Clopa_1621 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D Clopa_1432 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Clopa_1044 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D Clopa_1849 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Clopa_2445 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Clopa_3234 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Clopa_0269 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clopa_2214 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1] D Clopa_2332 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Clopa_3245 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Clopa_3246 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Clopa_1236 hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D Clopa_1247 adenylate cyclase, class 2 (thermophilic) K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D Clopa_4834 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Clopa_4099 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Clopa_4791 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Clopa_3658 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5] D Clopa_4491 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3] D Clopa_4340 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clopa_4348 adenylylsulfate kinase ApsK K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Clopa_4341 PAPS reductase/FAD synthetase family protein K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clopa_0642 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:cpas00240] D Clopa_1632 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clopa_1631 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clopa_1623 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Clopa_1624 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Clopa_1625 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Clopa_1628 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Clopa_1627 2-polyprenylphenol hydroxylase-like oxidoreductase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Clopa_1629 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Clopa_1626 orotidine 5''-phosphate decarboxylase, subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Clopa_2579 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Clopa_3335 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Clopa_2152 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Clopa_0373 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Clopa_2669 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Clopa_3896 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Clopa_4042 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Clopa_3658 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5] D Clopa_3674 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Clopa_0388 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Clopa_2880 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Clopa_4791 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Clopa_2717 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Clopa_2207 cytidine deaminase, homotetrameric K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Clopa_1709 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Clopa_1129 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Clopa_0269 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clopa_2351 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Clopa_3234 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Clopa_4390 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Clopa_0379 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Clopa_2356 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Clopa_4535 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Clopa_1055 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clopa_0435 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clopa_0433 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Clopa_1053 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Clopa_1051 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpas00250] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_0299 nicotinate-nucleotide pyrophosphorylase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Clopa_3887 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0325 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0562 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_2530 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_3858 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_1962 L-asparaginase/GlutRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Clopa_4638 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Clopa_2393 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Clopa_3426 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clopa_3425 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clopa_4834 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Clopa_2611 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Clopa_1623 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Clopa_1624 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Clopa_0605 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Clopa_2400 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Clopa_2401 NADH/NADPH-dependent glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Clopa_1425 NADPH-dependent glutamate synthase, homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Clopa_4623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clopa_1632 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clopa_1631 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clopa_1348 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clopa_2053 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cpas00260] D Clopa_4080 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_0173 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_1180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_4723 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clopa_3500 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clopa_3499 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Clopa_3501 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Clopa_1149 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Clopa_2339 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clopa_4676 lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Clopa_3672 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clopa_1319 phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clopa_3633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clopa_4720 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clopa_0018 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clopa_2035 fructose-2,6-bisphosphatase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Clopa_1257 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Clopa_1254 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Clopa_1255 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Clopa_1662 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Clopa_1710 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Clopa_3136 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Clopa_3488 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Clopa_3489 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cpas00270] D Clopa_1274 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clopa_0866 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clopa_0445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clopa_4043 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_3188 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_4192 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_4205 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_0533 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_1757 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clopa_4044 cystathionine beta-lyase/cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clopa_1664 cystathionine beta-lyase/cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clopa_1250 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clopa_2036 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clopa_4365 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clopa_3723 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clopa_4147 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clopa_4081 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Clopa_1760 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clopa_3020 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clopa_2884 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Clopa_2429 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Clopa_4396 haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D Clopa_2246 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clopa_2147 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Clopa_4080 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_0173 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_1180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_4723 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clopa_3500 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clopa_1616 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Clopa_4417 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Clopa_1663 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Clopa_4349 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clopa_1617 OAH/OAS sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clopa_4191 OAH/OAS sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clopa_0158 OAH/OAS sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clopa_4180 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clopa_4784 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_2981 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_4803 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_2980 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_1710 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Clopa_3136 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Clopa_1254 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Clopa_1255 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Clopa_4720 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clopa_0018 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:cpas00280] D Clopa_4784 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_2981 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_1420 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clopa_2360 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpas00290] D Clopa_1662 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Clopa_2227 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Clopa_2228 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Clopa_2229 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Clopa_4275 thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_2225 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_1298 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_1299 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clopa_2226 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Clopa_4874 dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Clopa_0502 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Clopa_4784 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_2981 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_3987 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Clopa_1748 isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cpas00300] D Clopa_3500 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clopa_4080 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_0173 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_1180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_4723 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clopa_3106 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clopa_2021 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clopa_3107 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Clopa_3114 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Clopa_3120 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clopa_0616 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clopa_3984 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Clopa_0410 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Clopa_2442 aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clopa_1181 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Clopa_1756 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Clopa_0749 transcriptional regulator with HTH domain and aminotransferase domain K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Clopa_2896 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clopa_2895 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cpas00310] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_1710 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Clopa_3136 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Clopa_3776 lysine-2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D Clopa_1768 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Clopa_1769 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Clopa_4869 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:cpas00220] D Clopa_0217 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Clopa_3426 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clopa_3425 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clopa_1672 arginase K01476 rocF; arginase [EC:3.5.3.1] D Clopa_0642 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Clopa_4623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clopa_1632 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clopa_1631 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3123 glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Clopa_3121 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Clopa_3515 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Clopa_3122 N-acetyl-gamma-glutamyl-phosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Clopa_0531 N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Clopa_3120 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clopa_0616 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cpas00330] D Clopa_3055 arginine/lysine/ornithine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Clopa_1760 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clopa_3020 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clopa_4081 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clopa_1672 arginase K01476 rocF; arginase [EC:3.5.3.1] D Clopa_4624 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Clopa_4625 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Clopa_4626 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_4869 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:cpas00340] D Clopa_4055 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Clopa_4056 ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Clopa_4046 phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Clopa_4047 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Clopa_4051 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Clopa_4052 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Clopa_4049 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Clopa_4053 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Clopa_4050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_4187 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_4057 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Clopa_4054 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:cpas00350] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_4050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_4187 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_1347 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1400 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1767 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:cpas00360] D Clopa_1423 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_4050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_4187 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_4869 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Clopa_0897 NADH:flavin oxidoreductase K10797 enr; 2-enoate reductase [EC:1.3.1.31] D Clopa_0474 NADH:flavin oxidoreductase K10797 enr; 2-enoate reductase [EC:1.3.1.31] D Clopa_1159 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Clopa_0658 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism [PATH:cpas00380] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clopa_0741 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpas00400] D Clopa_4665 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Clopa_4663 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Clopa_4658 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Clopa_4659 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Clopa_4662 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Clopa_4661 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Clopa_3494 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clopa_3493 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Clopa_1534 anthranilate synthase K13503 trpEG; anthranilate synthase [EC:4.1.3.27] D Clopa_3492 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Clopa_3490 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Clopa_3491 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Clopa_3488 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Clopa_3489 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Clopa_3498 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D Clopa_4664 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Clopa_3986 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_4050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_4187 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cpas00410] D Clopa_3980 L-aspartate-alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Clopa_0605 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Clopa_1050 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K25571 pydD; beta-alanine---2-oxoglutarate transaminase [EC:2.6.1.120] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clopa_3979 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Clopa_1055 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clopa_0435 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clopa_0433 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Clopa_1053 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Clopa_1051 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D Clopa_1420 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:cpas00430] D Clopa_0605 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Clopa_2469 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clopa_2470 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clopa_0949 alcohol dehydrogenase, class IV K25985 sarD; sulfoacetaldehyde reductase (NADH) [EC:1.1.1.433] D Clopa_3693 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-] D Clopa_0943 pyruvate-formate lyase K25261 islA; isethionate sulfite-lyase [EC:4.4.1.38] D Clopa_0944 glycyl-radical enzyme activator family protein K25262 islB; isethionate sulfite-lyase activating enzyme C 00440 Phosphonate and phosphinate metabolism [PATH:cpas00440] D Clopa_3541 putative enzyme of phosphonate metabolism K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D Clopa_3542 phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D Clopa_3536 ABC-type phosphonate transport system, ATPase component K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D Clopa_3538 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D Clopa_3540 putative enzyme of phosphonate metabolism K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D Clopa_4629 metal-dependent hydrolase, beta-lactamase superfamily III K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] D Clopa_3535 putative metal-dependent phosphoesterase, PHP family K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57] D Clopa_4267 putative metal-dependent phosphoesterase, PHP family K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57] C 00450 Selenocompound metabolism [PATH:cpas00450] D Clopa_1663 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Clopa_4044 cystathionine beta-lyase/cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clopa_1664 cystathionine beta-lyase/cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clopa_1250 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clopa_2036 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clopa_4672 cysteine desulfurase-like protein, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Clopa_4642 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clopa_4455 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clopa_4340 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clopa_4341 PAPS reductase/FAD synthetase family protein K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clopa_0411 selenium donor protein K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Clopa_0244 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cpas00460] D Clopa_1962 L-asparaginase/GlutRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Clopa_2339 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cpas00470] D Clopa_3607 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clopa_4869 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Clopa_0371 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clopa_1710 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Clopa_3136 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Clopa_4622 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Clopa_4556 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clopa_3887 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0325 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0562 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_2530 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_3858 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0410 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Clopa_1181 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Clopa_1756 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:cpas00480] D Clopa_1760 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clopa_3020 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:cpas00540] D Clopa_3248 haloacid dehalogenase superfamily enzyme, subfamily IA K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] C 00542 O-Antigen repeat unit biosynthesis [PATH:cpas00542] D Clopa_4389 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpas00541] D Clopa_3051 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0875 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0882 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0918 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clopa_0707 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_0830 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_4076 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clopa_0855 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clopa_0443 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clopa_3049 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Clopa_0872 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Clopa_3048 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clopa_0873 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clopa_3047 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clopa_0874 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clopa_1669 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Clopa_3028 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Clopa_0852 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Clopa_3076 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Clopa_3073 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Clopa_3443 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clopa_4412 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clopa_0848 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clopa_4593 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Clopa_4388 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clopa_4712 putative dehydrogenase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] C 00550 Peptidoglycan biosynthesis [PATH:cpas00550] D Clopa_4376 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clopa_4782 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clopa_3582 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clopa_4596 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Clopa_4556 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clopa_2896 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clopa_0371 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clopa_2895 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Clopa_2581 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_2858 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_3178 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_2652 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_4433 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_3442 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_2124 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_1746 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_4606 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_1268 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_2894 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clopa_2988 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clopa_3012 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clopa_2157 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clopa_2159 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clopa_4399 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clopa_2897 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clopa_3585 cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D Clopa_2716 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_2711 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_2178 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_3444 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Clopa_3445 putative glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cpas00552] D Clopa_4433 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_3442 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_2124 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_1746 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_4606 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_1268 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_4389 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clopa_3029 exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Clopa_0831 cell envelope-related function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clopa_2176 cell envelope-related function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clopa_0796 cell envelope-related function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clopa_0369 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_1266 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_4085 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_2231 phosphoglycerol transferase family protein, alkaline phosphatase superfamily K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cpas00543] D Clopa_4389 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clopa_3786 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D Clopa_1274 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clopa_0866 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clopa_0445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cpas00730] D Clopa_4123 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Clopa_0212 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Clopa_3187 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_2403 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_0206 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_0207 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clopa_4120 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Clopa_1126 iron-only hydrogenase maturation rSAM protein HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Clopa_2827 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Clopa_4121 putative enzyme of thiazole biosynthesis K03149 thiG; thiazole synthase [EC:2.8.1.10] D Clopa_4119 thiamine monophosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D Clopa_0214 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Clopa_0215 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Clopa_2456 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clopa_2458 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Clopa_4491 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cpas00740] D Clopa_0219 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Clopa_0221 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Clopa_0218 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Clopa_0220 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Clopa_2596 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Clopa_0214 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Clopa_2724 NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Clopa_0938 NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:cpas00750] D Clopa_3501 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Clopa_1149 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Clopa_2999 pyridoxal 5''-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Clopa_2998 pyridoxal 5''-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cpas00760] D Clopa_0299 nicotinate-nucleotide pyrophosphorylase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Clopa_0298 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Clopa_3322 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Clopa_2719 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clopa_2718 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clopa_3896 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Clopa_4042 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Clopa_3658 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5] D Clopa_2174 nicotinate/nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Clopa_0117 Zn-finger containing NTP pyrophosphohydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Clopa_3227 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Clopa_0177 NAD-dependent protein deacetylase, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Clopa_2825 putative sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:cpas00770] D Clopa_4275 thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_2225 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_1298 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clopa_1299 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clopa_2226 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Clopa_4874 dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Clopa_0502 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Clopa_3978 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Clopa_3581 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Clopa_1125 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Clopa_3979 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Clopa_4563 pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Clopa_2447 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Clopa_2465 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Clopa_2064 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Clopa_3610 holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Clopa_1307 phosphopantetheine--protein transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Clopa_4784 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_2981 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_1055 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clopa_0435 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clopa_0433 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Clopa_1053 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Clopa_1051 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D Clopa_3980 L-aspartate-alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:cpas00780] D Clopa_1508 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Clopa_4809 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clopa_2116 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clopa_4810 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4260 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_1653 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_0961 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4160 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_1525 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4807 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clopa_1509 putative hydrolase or acyltransferase of alpha/beta superfamily K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Clopa_1510 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Clopa_1517 adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Clopa_1516 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Clopa_0793 biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6] D Clopa_2990 iron-only hydrogenase maturation rSAM protein HydE K01012 bioB; biotin synthase [EC:2.8.1.6] D Clopa_1668 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:cpas00790] D Clopa_0287 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Clopa_1067 NTP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D Clopa_0290 dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D Clopa_0289 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Clopa_2357 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Clopa_3125 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Clopa_0219 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Clopa_2877 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D Clopa_2876 aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Clopa_2875 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Clopa_0683 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Clopa_0684 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Clopa_3253 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Clopa_0535 metal-dependent hydrolase, beta-lactamase superfamily II K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Clopa_0993 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Clopa_0405 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Clopa_0986 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Clopa_4244 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clopa_4245 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clopa_0988 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clopa_0429 molybdenum hydroxylase accessory protein, YgfJ family K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Clopa_0992 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:cpas00670] D Clopa_2357 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Clopa_4564 formyltetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Clopa_2832 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Clopa_3023 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Clopa_2339 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clopa_2055 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Clopa_0497 AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clopa_2056 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clopa_2450 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clopa_2036 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clopa_2356 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Clopa_4535 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Clopa_4821 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Clopa_1833 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cpas00860] D Clopa_3348 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clopa_4339 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Clopa_4336 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Clopa_1199 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Clopa_4338 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Clopa_0488 flavodoxin K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Clopa_4337 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Clopa_4355 siroheme synthase, N-terminal domain protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Clopa_0540 transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Clopa_0541 transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Clopa_0538 putative heme d1 biosynthesis radical SAM protein NirJ1 K22226 ahbC; Fe-coproporphyrin III synthase D Clopa_0539 putative heme d1 biosynthesis radical SAM protein NirJ2 K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Clopa_1203 cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Clopa_1217 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Clopa_1220 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Clopa_1218 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Clopa_1219 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Clopa_1221 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Clopa_1213 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Clopa_1216 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D Clopa_1215 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D Clopa_1212 precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Clopa_1210 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Clopa_1209 ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Clopa_1204 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Clopa_1205 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Clopa_4111 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Clopa_4110 cobalamin 5''-phosphate synthase/cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Clopa_4112 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Clopa_4109 fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Clopa_1225 putative kinase involved in propanediol utilization K16651 pduX; L-threonine kinase [EC:2.7.1.177] D Clopa_1208 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D Clopa_3646 hypothetical protein K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpas00130] D Clopa_1969 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Clopa_1974 isochorismate synthase family protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Clopa_1975 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D Clopa_1998 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D Clopa_2001 o-succinylbenzoic acid synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Clopa_2000 2-succinylbenzoyl-CoA synthetase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D Clopa_1999 dihydroxynaphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D Clopa_2002 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Clopa_2003 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Clopa_4724 putative NADPH-quinone reductase (modulator of drug activity B) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Clopa_4729 putative NADPH-quinone reductase (modulator of drug activity B) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cpas00900] D Clopa_2827 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Clopa_2584 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Clopa_4538 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Clopa_0365 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Clopa_0228 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Clopa_2586 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2829 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Clopa_2581 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_2858 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_3178 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_2652 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Clopa_4401 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_3603 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_3604 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_4030 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_4031 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_0950 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clopa_0951 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cpas00523] D Clopa_3049 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Clopa_0872 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Clopa_3048 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clopa_0873 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clopa_3047 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clopa_0874 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clopa_1669 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Clopa_3028 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Clopa_0852 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:cpas01054] D Clopa_3887 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0325 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0562 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_2530 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_3858 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cpas01053] D Clopa_1974 isochorismate synthase family protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Clopa_1535 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D Clopa_3048 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clopa_0873 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:cpas00332] D Clopa_4625 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Clopa_4626 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cpas00261] D Clopa_4340 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clopa_4341 PAPS reductase/FAD synthetase family protein K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clopa_4080 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_0173 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_1180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clopa_4723 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clopa_3106 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clopa_2021 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clopa_3107 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cpas00521] D Clopa_3905 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3927 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3919 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3053 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_0885 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clopa_3049 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Clopa_0872 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Clopa_3048 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clopa_0873 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clopa_3047 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clopa_0874 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clopa_1669 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Clopa_3028 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Clopa_0852 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Clopa_3905 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3927 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Clopa_3919 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cpas00525] D Clopa_3049 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Clopa_0872 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Clopa_3048 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clopa_0873 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cpas00401] D Clopa_4664 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_4050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_4187 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Clopa_3494 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clopa_3493 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Clopa_4811 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clopa_4810 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4260 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_1653 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_0961 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4160 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_1525 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Clopa_4014 acyl carrier protein K02078 acpP; acyl carrier protein D Clopa_2474 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D Clopa_4365 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clopa_3723 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clopa_4147 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cpas00362] D Clopa_1159 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Clopa_0658 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Clopa_0731 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_1073 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_1075 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_3876 uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Clopa_2708 uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Clopa_1423 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:cpas00627] D Clopa_2355 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Clopa_1768 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Clopa_1769 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:cpas00625] D Clopa_1347 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1400 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1767 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_2141 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clopa_4846 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4238 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4706 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_3462 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_2677 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_2359 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4188 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4212 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_1024 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_1025 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4134 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_4181 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_2127 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clopa_3474 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_3464 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_3465 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_1056 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_4148 nitrogenase subunit NifH (ATPase) K02588 nifH; nitrogenase iron protein NifH D Clopa_4183 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clopa_4707 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4237 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4845 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_2358 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4189 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4213 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_1023 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4170 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_4182 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_3463 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_2678 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clopa_2126 nitrogenase molybdenum-iron protein, alpha and beta chains K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation [PATH:cpas00622] D Clopa_0731 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_1073 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_1075 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_1159 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Clopa_0658 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation [PATH:cpas00633] D Clopa_1733 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Clopa_0035 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Clopa_1979 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Clopa_0034 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Clopa_1977 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Clopa_2016 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Clopa_2557 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Clopa_0057 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_1484 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_2128 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_3232 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clopa_1483 Fe-S-cluster-containing hydrogenase subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D Clopa_0642 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:cpas00621] D Clopa_0731 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_1073 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_1075 uncharacterized protein, 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clopa_1159 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Clopa_0658 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation [PATH:cpas00626] D Clopa_1347 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1400 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clopa_1767 alcohol dehydrogenase, class IV K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cpas03020] D Clopa_4520 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clopa_4519 DNA-directed RNA polymerase, beta'' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clopa_4483 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clopa_2446 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D Clopa_2399 DNA helicase, Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cpas03010] D Clopa_2577 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Clopa_4506 ribosomal protein S3, bacterial type K02982 RP-S3; small subunit ribosomal protein S3 D Clopa_4484 ribosomal protein S4, bacterial/organelle type K02986 RP-S4; small subunit ribosomal protein S4 D Clopa_4495 ribosomal protein S5, bacterial/organelle type K02988 RP-S5; small subunit ribosomal protein S5 D Clopa_4893 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Clopa_4516 ribosomal protein S7, bacterial/organelle K02992 RP-S7; small subunit ribosomal protein S7 D Clopa_4498 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Clopa_4476 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Clopa_4513 ribosomal protein S10, bacterial/organelle K02946 RP-S10; small subunit ribosomal protein S10 D Clopa_4485 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Clopa_4517 ribosomal protein S12, bacterial/organelle K02950 RP-S12; small subunit ribosomal protein S12 D Clopa_4486 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Clopa_4499 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Clopa_2597 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Clopa_2481 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Clopa_4503 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Clopa_4891 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Clopa_4508 ribosomal protein S19, bacterial/organelle K02965 RP-S19; small subunit ribosomal protein S19 D Clopa_2185 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Clopa_2200 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Clopa_4524 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Clopa_4509 ribosomal protein L2, bacterial/organellar K02886 RP-L2; large subunit ribosomal protein L2 D Clopa_4512 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3 D Clopa_4511 50S ribosomal protein L4, bacterial/organelle K02926 RP-L4; large subunit ribosomal protein L4 D Clopa_4500 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Clopa_4497 ribosomal protein L6, bacterial type K02933 RP-L6; large subunit ribosomal protein L6 D Clopa_4521 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Clopa_4883 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Clopa_4522 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Clopa_4525 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Clopa_4477 ribosomal protein L13, bacterial type K02871 RP-L13; large subunit ribosomal protein L13 D Clopa_4502 ribosomal protein L14, bacterial/organelle K02874 RP-L14; large subunit ribosomal protein L14 D Clopa_4493 ribosomal protein L15, bacterial/organelle K02876 RP-L15; large subunit ribosomal protein L15 D Clopa_4505 ribosomal protein L16, bacterial/organelle K02878 RP-L16; large subunit ribosomal protein L16 D Clopa_4482 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Clopa_4496 ribosomal protein L18, bacterial type K02881 RP-L18; large subunit ribosomal protein L18 D Clopa_2485 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Clopa_3091 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Clopa_2169 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Clopa_4507 ribosomal protein L22, bacterial type K02890 RP-L22; large subunit ribosomal protein L22 D Clopa_4510 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Clopa_4501 ribosomal protein L24, bacterial/organelle K02895 RP-L24; large subunit ribosomal protein L24 D Clopa_3054 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D Clopa_3680 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D Clopa_2171 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Clopa_2460 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Clopa_4504 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Clopa_4494 ribosomal protein L30, bacterial/organelle K02907 RP-L30; large subunit ribosomal protein L30 D Clopa_0378 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Clopa_2472 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Clopa_4528 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Clopa_4911 ribosomal protein L34, bacterial type K02914 RP-L34; large subunit ribosomal protein L34 D Clopa_3092 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Clopa_4487 ribosomal protein L36, bacterial type K02919 RP-L36; large subunit ribosomal protein L36 D Clopa_4518 ribosomal protein HS6-type (S12/L30/L7a) K07590 RP-L7A; large subunit ribosomal protein L7A D Clopa_0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0178 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_4552 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_3440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0127 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0146 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0109 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0128 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0171 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0136 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_4551 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_3439 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0180 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_4550 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0148 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0172 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_3438 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0110 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0181 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0129 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_4555 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpas00970] D Clopa_0012 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clopa_4553 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clopa_0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_1460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_1468 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_0072 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_0115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_1477 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_3437 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clopa_4559 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clopa_4549 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clopa_3101 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clopa_4827 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clopa_0183 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clopa_3098 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clopa_1243 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clopa_1463 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clopa_1470 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clopa_0111 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clopa_4829 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clopa_1674 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clopa_0114 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1467 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1476 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1459 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_0113 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1466 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1473 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_3099 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_4531 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1462 tRNA-His K14226 tRNA-His; tRNA His D Clopa_1469 tRNA-His K14226 tRNA-His; tRNA His D Clopa_0179 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clopa_1289 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_2067 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_4571 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_4576 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_1858 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_0112 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_1465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_1472 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_1461 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_0130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_0149 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_1464 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_1471 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_1474 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_0011 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4554 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4569 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4574 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4570 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4575 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_0138 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clopa_3100 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clopa_0182 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clopa_1458 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clopa_4604 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clopa_1475 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clopa_0101 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clopa_0024 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clopa_0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clopa_0095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clopa_4367 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clopa_4826 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clopa_4530 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clopa_4871 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clopa_4320 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Clopa_4369 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clopa_4366 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clopa_3102 tRNA-Val K14237 tRNA-Val; tRNA Val D Clopa_4368 tRNA-Val K14237 tRNA-Val; tRNA Val D Clopa_4828 tRNA-Val K14237 tRNA-Val; tRNA Val D Clopa_3348 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clopa_0267 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clopa_1358 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clopa_1450 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clopa_1357 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clopa_1451 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clopa_0268 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clopa_1359 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clopa_1449 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clopa_0266 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clopa_2407 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clopa_2342 putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clopa_2336 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clopa_0516 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Clopa_0265 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Clopa_4637 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clopa_4558 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clopa_3095 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clopa_0020 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clopa_4537 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clopa_0244 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clopa_2450 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clopa_3126 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clopa_1241 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clopa_0273 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clopa_4560 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clopa_3243 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clopa_3510 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clopa_0693 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clopa_2335 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clopa_3089 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clopa_3088 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clopa_0750 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clopa_1231 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clopa_1193 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cpas03060] D Clopa_4492 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clopa_4527 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clopa_3631 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clopa_2328 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D Clopa_2329 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Clopa_2324 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clopa_4908 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clopa_4358 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clopa_2480 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clopa_0102 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D Clopa_2478 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clopa_0614 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Clopa_4247 Sec-independent protein secretion pathway component K03116 tatA; sec-independent protein translocase protein TatA D Clopa_1737 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_0039 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_1983 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_4246 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Clopa_4248 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_0040 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1984 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1985 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1738 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1739 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1702 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clopa_2379 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clopa_2486 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clopa_0164 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clopa_2882 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cpas04122] D Clopa_3187 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_2403 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_0206 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_3186 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Clopa_0993 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Clopa_4352 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Clopa_0405 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Clopa_0986 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Clopa_0207 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clopa_4353 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Clopa_4122 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Clopa_4351 putative metal-dependent protease of the PAD1/JAB1 superfamily K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome C 03018 RNA degradation [PATH:cpas03018] D Clopa_3632 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clopa_2598 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Clopa_4743 DNA/RNA helicase, superfamily II K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Clopa_3630 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clopa_3173 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_4086 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_2617 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_2618 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Clopa_0377 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Clopa_2605 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D Clopa_2412 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clopa_0609 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clopa_4020 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_3574 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1337 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_2193 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clopa_1430 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clopa_2660 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clopa_3244 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Clopa_0205 tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cpas03030] D Clopa_3575 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clopa_4765 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clopa_0103 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clopa_0191 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clopa_2184 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clopa_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clopa_4881 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Clopa_2215 DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D Clopa_4892 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_4304 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_0329 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3153 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3215 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_1412 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3392 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_2488 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Clopa_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clopa_1447 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cpas03410] D Clopa_1427 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Clopa_1277 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clopa_4415 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Clopa_2291 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Clopa_0242 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clopa_0132 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clopa_2389 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Clopa_0543 apurinic endonuclease APN1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Clopa_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clopa_2989 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clopa_1447 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cpas03420] D Clopa_4587 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Clopa_3588 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Clopa_3589 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Clopa_4731 putative endonuclease K03703 uvrC; excinuclease ABC subunit C D Clopa_3583 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Clopa_1666 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1670 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_2259 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_3321 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1446 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1133 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clopa_1447 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clopa_2399 DNA helicase, Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:cpas03430] D Clopa_2663 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Clopa_3056 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clopa_2662 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Clopa_1666 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1670 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_2259 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_3321 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1446 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1133 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_2831 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Clopa_2830 exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Clopa_2989 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clopa_4892 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_4304 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_0329 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3153 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3215 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_1412 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3392 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3575 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clopa_4765 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clopa_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clopa_0103 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clopa_2184 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clopa_0191 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clopa_1447 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clopa_3144 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:cpas03440] D Clopa_2989 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clopa_4892 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_4304 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_0329 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3153 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3215 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_1412 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3392 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_0004 recF protein K03629 recF; DNA replication and repair protein RecF D Clopa_2209 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Clopa_0105 recombination protein RecR K06187 recR; recombination protein RecR D Clopa_2604 protein RecA K03553 recA; recombination protein RecA D Clopa_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clopa_2320 Holliday junction DNA helicase, RuvA subunit K03550 ruvA; holliday junction DNA helicase RuvA D Clopa_2321 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Clopa_2463 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clopa_4364 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clopa_3575 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clopa_4765 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clopa_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clopa_0103 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clopa_2184 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clopa_0191 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clopa_2448 primosomal protein N'' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cpas02010] D Clopa_3482 ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D Clopa_3481 ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein D Clopa_3480 ABC-type spermidine/putrescine transport system, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Clopa_3719 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4139 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4155 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_1150 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4345 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_3692 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_3718 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_4138 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_1147 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_4343 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_3691 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_1148 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_3717 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_4137 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_4344 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_3694 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_3459 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Clopa_3458 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Clopa_1292 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Clopa_0051 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Clopa_3834 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Clopa_1293 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Clopa_0052 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Clopa_3832 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Clopa_3833 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clopa_0053 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clopa_1294 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clopa_2375 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D Clopa_2374 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein D Clopa_2373 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein D Clopa_2372 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Clopa_0154 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D Clopa_4653 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D Clopa_0153 ABC-type proline/glycine betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D Clopa_0156 ABC-type proline/glycine betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D Clopa_4654 glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Clopa_0155 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Clopa_4613 ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clopa_3601 ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clopa_3931 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clopa_3930 permease component of ABC-type sugar transporter K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Clopa_3929 ABC-type sugar transport system, permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Clopa_3600 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein D Clopa_3936 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein D Clopa_3599 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein D Clopa_3935 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein D Clopa_3598 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein D Clopa_3934 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein D Clopa_0945 ABC-type sugar transport system, periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein D Clopa_0946 permease component of ABC-type sugar transporter K10237 thuF; trehalose/maltose transport system permease protein D Clopa_0947 ABC-type sugar transport system, permease component K10238 thuG; trehalose/maltose transport system permease protein D Clopa_0393 putative ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Clopa_0547 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D Clopa_0395 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D Clopa_0548 putative ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D Clopa_0396 putative ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D Clopa_0394 ATPase component of uncharacterized ABC-type transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Clopa_0546 ATPase component of uncharacterized ABC-type transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Clopa_4285 ABC-type sugar transport system, periplasmic component K17213 K17213; inositol transport system substrate-binding protein D Clopa_0690 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Clopa_0688 permease component of ABC-type sugar transporter K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Clopa_0686 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Clopa_0689 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Clopa_0687 ATPase component of ABC-type sugar transporter K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Clopa_2433 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clopa_2434 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D Clopa_2435 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D Clopa_2436 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Clopa_3534 ABC-type phosphate/phosphonate transport system, periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein D Clopa_3531 ABC-type phosphate/phosphonate transport system, permease component K02042 phnE; phosphonate transport system permease protein D Clopa_3532 ABC-type phosphate/phosphonate transport system, permease component K02042 phnE; phosphonate transport system permease protein D Clopa_3533 phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Clopa_4278 periplasmic component of amino acid ABC-type transporter/signal transduction system K10036 glnH; glutamine transport system substrate-binding protein D Clopa_4277 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K10037 glnP; glutamine transport system permease protein D Clopa_4276 ABC-type polar amino acid transport system, ATPase component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D Clopa_0461 periplasmic component of amino acid ABC-type transporter/signal transduction system K02424 tcyA; L-cystine transport system substrate-binding protein D Clopa_0462 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K10009 tcyB; L-cystine transport system permease protein D Clopa_0463 ABC-type polar amino acid transport system, ATPase component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Clopa_4216 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D Clopa_3667 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D Clopa_3665 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D Clopa_3666 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D Clopa_3108 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D Clopa_1452 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D Clopa_3112 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein D Clopa_3111 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein D Clopa_3110 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D Clopa_3109 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D Clopa_4796 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D Clopa_4392 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein D Clopa_4391 ATPase component of Mn/Zn ABC-type transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Clopa_0778 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D Clopa_0779 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D Clopa_0777 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Clopa_0773 cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Clopa_0166 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Clopa_2101 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Clopa_1515 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Clopa_4479 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Clopa_3716 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Clopa_0671 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Clopa_0676 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Clopa_4481 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clopa_4480 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clopa_3045 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Clopa_0175 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Clopa_0174 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Clopa_4690 ABC-type transport system, involved in lipoprotein release, permease component K11632 bceB; bacitracin transport system permease protein D Clopa_4691 ABC-type antimicrobial peptide transport system, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein D Clopa_0889 ABC-type transport system, involved in lipoprotein release, permease component K09808 lolC_E; lipoprotein-releasing system permease protein D Clopa_0890 ABC-type antimicrobial peptide transport system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Clopa_3592 cell division protein K09811 ftsX; cell division transport system permease protein D Clopa_3593 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clopa_4598 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4443 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_3939 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4444 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4599 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_3938 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4649 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_0402 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_0403 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4114 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4648 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_3740 ATPase component of ABC transporters with duplicated ATPase domain K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cpas02060] D Clopa_4464 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Clopa_2609 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr D Clopa_2997 PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D Clopa_3914 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_3915 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_0195 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_2088 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_1029 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Clopa_3683 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D Clopa_2086 PTS system, alpha-glucoside-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Clopa_3918 PTS system, glucose-like IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Clopa_0496 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D Clopa_1398 mannitol/fructose-specific phosphotransferase system, IIA domain protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D Clopa_1396 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D Clopa_1145 phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D Clopa_1143 phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D Clopa_1144 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D Clopa_4461 PTS system, mannose/fructose/sorbose family, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Clopa_3925 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Clopa_4460 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Clopa_3924 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Clopa_4459 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component D Clopa_3923 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component D Clopa_3910 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component D Clopa_4458 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component D Clopa_3922 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID K02796 manZ; mannose PTS system EIID component D Clopa_3909 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID K02796 manZ; mannose PTS system EIID component D Clopa_3907 phosphotransferase system, mannose/fructose-specific component IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-] D Clopa_1339 PTS system, mannose/fructose/sorbose family, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D Clopa_1340 PTS system, mannose/fructose/sorbose family, IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D Clopa_1341 PTS system, mannose/fructose/sorbose family, IIC component K02814 sorA; sorbose PTS system EIIC component D Clopa_1342 PTS system, mannose/fructose/sorbose family, IID component K02815 sorM; sorbose PTS system EIID component D Clopa_3912 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D Clopa_1406 phosphotransferase system sorbitol-specific component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Clopa_1405 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Clopa_1404 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D Clopa_0713 phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D Clopa_3766 phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D Clopa_0714 phosphotransferase system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D Clopa_3765 phosphotransferase system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D Clopa_3764 phosphotransferase system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D Clopa_0715 phosphotransferase system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D Clopa_4842 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIA component/PTS system, fructose subfamily, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Clopa_4466 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Clopa_4843 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Clopa_4467 PTS system, fructose subfamily, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cpas03070] D Clopa_2328 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D Clopa_2329 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Clopa_4527 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clopa_3631 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clopa_4492 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clopa_2324 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clopa_4908 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clopa_4358 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clopa_2478 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clopa_2480 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clopa_4247 Sec-independent protein secretion pathway component K03116 tatA; sec-independent protein translocase protein TatA D Clopa_1737 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_0039 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_1983 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_4246 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Clopa_4248 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_0040 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1984 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1985 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1738 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1739 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:cpas02020] D Clopa_2431 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clopa_3660 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clopa_2430 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clopa_3659 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clopa_2433 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clopa_0286 signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clopa_0285 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07770 cssR; two-component system, OmpR family, response regulator CssR D Clopa_4589 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Clopa_3181 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Clopa_2942 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2944 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2954 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2918 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA D Clopa_0196 flagellar motor component K02556 motA; chemotaxis protein MotA D Clopa_3992 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clopa_3991 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clopa_3995 K+-transporting ATPase, KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Clopa_3994 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D Clopa_3993 K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D Clopa_4591 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD D Clopa_4693 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07668 vicR; two-component system, OmpR family, response regulator VicR D Clopa_4728 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07668 vicR; two-component system, OmpR family, response regulator VicR D Clopa_4677 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_4678 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_4679 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_3796 beta-fructosidase, levanase/invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clopa_4691 ABC-type antimicrobial peptide transport system, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein D Clopa_4690 ABC-type transport system, involved in lipoprotein release, permease component K11632 bceB; bacitracin transport system permease protein D Clopa_4258 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D Clopa_3182 signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Clopa_2273 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR D Clopa_1270 signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clopa_1308 signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clopa_1269 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18941 arlR; two-component system, OmpR family, response regulator ArlR D Clopa_1309 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18941 arlR; two-component system, OmpR family, response regulator ArlR D Clopa_0975 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D Clopa_2821 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clopa_4470 holo-ACP synthase CitX K05964 citX; holo-ACP synthase [EC:2.7.7.61] D Clopa_2033 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Clopa_0174 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Clopa_0175 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Clopa_1002 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_2499 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_2629 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_3625 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_3624 hypothetical protein K07800 agrD; AgrD protein D Clopa_4094 hypothetical protein K07800 agrD; AgrD protein D Clopa_1009 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clopa_0625 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clopa_1008 response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clopa_0624 response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clopa_2961 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D Clopa_3695 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Clopa_4703 hypothetical protein K11621 liaG; lia operon protein LiaG D Clopa_4209 nitrogen regulatory protein PII K04751 glnB; nitrogen regulatory protein P-II 1 D Clopa_4623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clopa_1768 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Clopa_1769 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3638 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Clopa_2852 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clopa_3415 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clopa_0034 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Clopa_1977 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Clopa_2016 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Clopa_2557 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Clopa_1733 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Clopa_0035 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Clopa_1979 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Clopa_4283 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clopa_2973 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clopa_0790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clopa_2432 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clopa_2969 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clopa_2977 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clopa_2972 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clopa_2970 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clopa_2975 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clopa_4407 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Clopa_4281 signal transduction histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D Clopa_4282 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07719 glnL; two-component system, response regulator GlnL D Clopa_0921 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN D Clopa_0700 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN D Clopa_4388 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clopa_2966 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Clopa_1672 arginase K01476 rocF; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cpas02024] D Clopa_2147 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Clopa_2660 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clopa_3494 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clopa_3493 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Clopa_3991 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clopa_0605 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Clopa_1130 hypothetical protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D Clopa_4633 ABC-type uncharacterized transport system, periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Clopa_4635 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Clopa_4632 ABC-type spermidine/putrescine transport system, permease component I K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D Clopa_4634 ABC-type spermidine/putrescine transport system, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Clopa_4013 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_2103 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_4407 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Clopa_0221 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Clopa_4787 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Clopa_2072 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Clopa_3624 hypothetical protein K07800 agrD; AgrD protein D Clopa_4094 hypothetical protein K07800 agrD; AgrD protein D Clopa_1002 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_2499 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_2629 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_3625 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_1009 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clopa_0625 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clopa_1008 response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clopa_0624 response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clopa_3108 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D Clopa_1452 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D Clopa_3112 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein D Clopa_3111 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein D Clopa_3110 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D Clopa_3109 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D Clopa_1034 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clopa_4176 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clopa_1035 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clopa_4175 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clopa_1036 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clopa_4174 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clopa_4173 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clopa_1037 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clopa_1038 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D Clopa_4908 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clopa_4527 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clopa_3631 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clopa_4492 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clopa_2324 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clopa_4358 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clopa_2478 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clopa_2480 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clopa_2821 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clopa_3296 Zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] D Clopa_0975 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cpas02030] D Clopa_0790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clopa_2432 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clopa_2972 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clopa_2969 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clopa_2977 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clopa_2970 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clopa_2971 chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Clopa_2975 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clopa_2976 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Clopa_4283 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clopa_2973 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clopa_2936 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clopa_2968 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Clopa_2967 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Clopa_0196 flagellar motor component K02556 motA; chemotaxis protein MotA D Clopa_0197 flagellar motor protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cpas02040] D Clopa_2938 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Clopa_2937 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF D Clopa_2936 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clopa_2935 hypothetical protein K02411 fliH; flagellar assembly protein FliH D Clopa_2934 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clopa_2933 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Clopa_2932 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Clopa_2927 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D Clopa_2968 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Clopa_2967 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Clopa_2926 flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D Clopa_2925 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clopa_2924 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clopa_2922 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clopa_2923 flagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D Clopa_2940 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Clopa_2939 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Clopa_2931 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Clopa_2929 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Clopa_2915 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Clopa_2914 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D Clopa_2964 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Clopa_2963 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Clopa_2942 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2944 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2954 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2957 flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D Clopa_2958 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS D Clopa_0196 flagellar motor component K02556 motA; chemotaxis protein MotA D Clopa_0197 flagellar motor protein K02557 motB; chemotaxis protein MotB D Clopa_2966 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Clopa_0461 periplasmic component of amino acid ABC-type transporter/signal transduction system K02424 tcyA; L-cystine transport system substrate-binding protein D Clopa_2216 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D Clopa_0089 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D Clopa_3638 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Clopa_2918 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Clopa_3632 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D Clopa_2036 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cpas01501] D Clopa_3695 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Clopa_3108 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D Clopa_1452 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D Clopa_3112 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein D Clopa_3111 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein D Clopa_3110 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D Clopa_3109 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D Clopa_3012 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clopa_2157 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clopa_2159 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cpas01502] D Clopa_3182 signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Clopa_2273 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR D Clopa_0371 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clopa_3607 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clopa_2895 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Clopa_2894 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clopa_2988 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpas01503] D Clopa_4473 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clopa_4589 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Clopa_3181 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Clopa_4258 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cpas01000] C 01001 Protein kinases [BR:cpas01001] D Clopa_2455 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Clopa_2239 protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Clopa_0884 capsular exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Clopa_0894 capsular exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Clopa_2431 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clopa_3660 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clopa_0286 signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clopa_3992 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clopa_3182 signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Clopa_1270 signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clopa_1308 signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clopa_1263 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Clopa_1009 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clopa_0625 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clopa_1850 putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Clopa_2972 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clopa_4281 signal transduction histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D Clopa_0832 putative regulator of cell autolysis K19694 chiS; two-component system, sensor histidine kinase ChiS D Clopa_4286 signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cpas01009] D Clopa_4020 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_3574 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1337 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_4070 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG D Clopa_2454 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cpas01002] D Clopa_2882 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Clopa_3353 prepilin signal peptidase PulO-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clopa_2186 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D Clopa_0036 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Clopa_1980 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Clopa_1734 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Clopa_2423 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D Clopa_1432 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Clopa_0202 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Clopa_0203 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Clopa_2017 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Clopa_2053 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clopa_2400 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Clopa_1348 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clopa_4638 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Clopa_3346 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D Clopa_0505 putative intracellular protease/amidase K03152 thiJ; protein deglycase [EC:3.5.1.124] D Clopa_2993 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D Clopa_0230 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70] D Clopa_0825 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70] D Clopa_0028 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71] D Clopa_1002 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_2499 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_2629 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_3625 hypothetical protein K07813 agrB; accessory gene regulator B D Clopa_1926 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D Clopa_1001 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D Clopa_3342 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D Clopa_0272 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein D Clopa_0276 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein D Clopa_0623 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D Clopa_3973 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Clopa_0912 putative carboxypeptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11] D Clopa_2394 putative Zn-dependent peptidase, insulinase K06972 PITRM1; presequence protease [EC:3.4.24.-] D Clopa_1011 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D Clopa_4837 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Clopa_3984 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Clopa_0281 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Clopa_4490 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Clopa_1176 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Clopa_2844 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Clopa_2369 leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-] D Clopa_0122 Zn-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Clopa_4565 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clopa_3970 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clopa_1132 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clopa_1287 peptidase family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-] D Clopa_2165 Zn-dependent protease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D Clopa_2585 putative membrane-associated Zn-dependent protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Clopa_1713 Zn-dependent protease K16922 yydH; putative peptide zinc metalloprotease protein D Clopa_2627 putative membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-] D Clopa_4589 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Clopa_3181 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Clopa_4788 subtilisin-like serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-] D Clopa_2716 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_2711 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_2178 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_1636 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Clopa_0340 protease subunit of ATP-dependent protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Clopa_4882 ATP-dependent protease, Lon family K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Clopa_4255 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Clopa_1639 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Clopa_1638 ATP-dependent protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D Clopa_2658 SOS regulatory protein LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Clopa_0551 SOS response transcriptional repressor, RecA-mediated autopeptidase K01356 lexA; repressor LexA [EC:3.4.21.88] D Clopa_1702 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clopa_2379 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clopa_2486 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clopa_0164 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clopa_2636 putative hydrolase or acyltransferase of alpha/beta superfamily K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-] D Clopa_3591 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Clopa_3971 putative membrane protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D Clopa_2822 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D Clopa_0184 putative MccF-like protein (microcin C7 resistance) K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Clopa_3057 collagenase-like protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Clopa_2416 collagenase-like protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:cpas01003] D Clopa_0369 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_1266 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_4085 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clopa_3223 glycosyltransferase K16150 K16150; glycogen synthase [EC:2.4.1.11] D Clopa_2380 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Clopa_3012 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clopa_3786 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D Clopa_3029 exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Clopa_4389 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clopa_4677 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_4678 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_4679 Levansucrase/Invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_3796 beta-fructosidase, levanase/invertase K00692 sacB; levansucrase [EC:2.4.1.10] D Clopa_1190 cellobiose phosphorylase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpas01005] D Clopa_3248 haloacid dehalogenase superfamily enzyme, subfamily IA K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Clopa_0856 glycosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-] D Clopa_3035 glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Clopa_4389 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpas01011] D Clopa_4376 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clopa_4782 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clopa_3582 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clopa_4596 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Clopa_4556 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clopa_2896 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clopa_0371 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clopa_3607 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clopa_4622 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Clopa_0184 putative MccF-like protein (microcin C7 resistance) K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Clopa_2894 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clopa_2988 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clopa_4433 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_3442 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_2124 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_1746 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_4606 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_1268 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clopa_3012 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clopa_2157 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clopa_2159 cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clopa_4399 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clopa_2897 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clopa_0165 cell division protein FtsI/penicillin-binding protein 2 K21467 pbpC; penicillin-binding protein 3 D Clopa_3585 cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D Clopa_2716 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_2711 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_2178 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clopa_0202 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Clopa_0203 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Clopa_2017 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Clopa_0230 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70] D Clopa_0825 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70] D Clopa_0028 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71] D Clopa_2065 soluble lytic murein transglycosylase-like protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clopa_4272 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Clopa_2414 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Clopa_1272 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clopa_4375 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clopa_4473 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cpas01004] D Clopa_4811 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clopa_4813 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clopa_4809 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clopa_2116 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clopa_4810 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4260 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_1653 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_0961 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4160 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_1525 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clopa_4807 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clopa_4812 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Clopa_3224 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Clopa_2656 lysophospholipase L1-like esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Clopa_4013 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_2103 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_2473 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clopa_1276 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clopa_3430 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:cpas01008] D Clopa_3887 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0325 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_0562 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_2530 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clopa_3858 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:cpas01006] D Clopa_2829 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Clopa_2581 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_2858 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_3178 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_2652 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clopa_2661 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Clopa_2003 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:cpas01007] D Clopa_3348 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clopa_0750 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clopa_1231 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clopa_1193 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Clopa_4537 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clopa_3243 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clopa_0244 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clopa_0273 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clopa_3126 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clopa_1241 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clopa_4560 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clopa_2336 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clopa_4637 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clopa_0516 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Clopa_0265 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Clopa_0693 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clopa_2335 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clopa_4558 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clopa_0020 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clopa_3510 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clopa_3095 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clopa_2407 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clopa_2342 putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clopa_3089 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clopa_3088 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clopa_2608 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clopa_3657 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clopa_2442 aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clopa_3113 aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D Clopa_4089 aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D Clopa_4050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_4187 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clopa_1510 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Clopa_1250 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clopa_3120 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clopa_0616 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clopa_1517 adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Clopa_4336 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Clopa_4869 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Clopa_4784 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clopa_2981 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 [BR:cpas00199] D Clopa_0939 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4] C 00194 Photosynthesis proteins [BR:cpas00194] D Clopa_4378 ATP synthase, F1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Clopa_4379 ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Clopa_4380 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Clopa_4381 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Clopa_4382 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Clopa_4383 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Clopa_4384 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Clopa_4385 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Clopa_4386 ATP synthase I chain K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cpas03000] D Clopa_2246 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clopa_4739 hypothetical protein K13653 K13653; AraC family transcriptional regulator D Clopa_0665 DNA-binding domain-containing protein, AraC-type K13653 K13653; AraC family transcriptional regulator D Clopa_4269 transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Clopa_4468 transcriptional regulator of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Clopa_4373 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D Clopa_1184 transcriptional regulator of sugar metabolism K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D Clopa_1185 transcriptional regulator of sugar metabolism K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D Clopa_2211 CBS domain-containing protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D Clopa_4442 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clopa_3932 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clopa_3998 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clopa_0274 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clopa_3707 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clopa_0703 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clopa_0708 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clopa_1607 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clopa_3901 transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D Clopa_0494 trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D Clopa_4628 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D Clopa_3544 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D Clopa_3352 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Clopa_0501 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Clopa_4876 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Clopa_1389 transcriptional regulator with HTH domain and aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Clopa_1393 transcriptional regulator with HTH domain and aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Clopa_2683 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D Clopa_3728 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D Clopa_0521 transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D Clopa_3422 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Clopa_2106 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Clopa_0735 transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA D Clopa_1538 transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D Clopa_1374 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Clopa_4755 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Clopa_1951 putative transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D Clopa_2706 putative transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D Clopa_3559 putative transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D Clopa_2411 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Clopa_3976 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Clopa_1642 Fe2+/Zn2+ uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Clopa_4879 transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D Clopa_4407 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Clopa_3189 rrf2 family protein, putative transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clopa_2402 rrf2 family protein, putative transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clopa_0612 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Clopa_0606 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Clopa_2045 putative transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Clopa_1550 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator D Clopa_4705 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator D Clopa_2387 Mn-dependent transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Clopa_2085 transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D Clopa_1668 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Clopa_4595 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Clopa_3913 transcriptional antiterminator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D Clopa_3920 transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D Clopa_0392 transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Clopa_1417 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor D Clopa_2576 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor D Clopa_1864 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D Clopa_3194 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D Clopa_2815 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D Clopa_3356 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D Clopa_1678 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D Clopa_1922 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D Clopa_0962 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D Clopa_1114 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D Clopa_2506 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D Clopa_3606 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Clopa_1028 transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D Clopa_2979 transcriptional antiterminator K03480 glcT; transcriptional antiterminator D Clopa_1397 transcriptional antiterminator K03483 mtlR; mannitol operon transcriptional activator D Clopa_3990 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Clopa_4026 purine catabolism regulator-like protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Clopa_4838 looped-hinge helix DNA binding domain, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Clopa_0204 looped-hinge helix DNA binding domain, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Clopa_4585 stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Clopa_4901 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clopa_4903 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clopa_4540 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Clopa_2824 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D Clopa_0942 transcriptional regulator/sugar kinase K02565 nagC; N-acetylglucosamine repressor D Clopa_2191 heat shock gene repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Clopa_4119 thiamine monophosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D Clopa_4547 transcriptional repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response D Clopa_3637 transcriptional regulator with sigma factor-related N-terminal domain K05311 cggR; central glycolytic genes regulator D Clopa_2880 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Clopa_2427 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D Clopa_2900 mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cpas03021] D Clopa_2399 DNA helicase, Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Clopa_4483 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clopa_4520 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clopa_4519 DNA-directed RNA polymerase, beta'' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clopa_2446 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Clopa_2216 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D Clopa_0089 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D Clopa_0959 RNA polymerase sigma-70 factor, TIGR02954 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clopa_1367 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clopa_3781 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clopa_4310 RNA polymerase sigma factor, sigma-70 family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clopa_3159 RNA polymerase sigma factor, sigma-70 family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clopa_2418 RNA polymerase sigma-K factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clopa_2424 RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clopa_2425 RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clopa_3017 RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clopa_0899 RNA polymerase sigma factor, sigma-70 family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clopa_4532 RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor D Clopa_4682 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Clopa_3798 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Clopa_3638 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Clopa_2918 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA D Clopa_2589 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Clopa_2833 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D Clopa_4526 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D Clopa_4561 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Clopa_3778 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Clopa_0377 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cpas03019] D Clopa_2168 ribonuclease G and E K08301 rng; ribonuclease G [EC:3.1.26.-] D Clopa_2475 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clopa_2412 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clopa_0609 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clopa_2605 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D Clopa_3630 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clopa_2378 putative HD superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Clopa_4743 DNA/RNA helicase, superfamily II K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Clopa_3173 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_4086 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_2617 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_2618 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Clopa_3632 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clopa_2598 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Clopa_0377 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Clopa_4020 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_3574 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_1337 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clopa_2193 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clopa_1430 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clopa_2660 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clopa_3244 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Clopa_0205 tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Clopa_2961 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D Clopa_3580 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:cpas03011] D Clopa_2577 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Clopa_4506 ribosomal protein S3, bacterial type K02982 RP-S3; small subunit ribosomal protein S3 D Clopa_4484 ribosomal protein S4, bacterial/organelle type K02986 RP-S4; small subunit ribosomal protein S4 D Clopa_4495 ribosomal protein S5, bacterial/organelle type K02988 RP-S5; small subunit ribosomal protein S5 D Clopa_4893 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Clopa_4516 ribosomal protein S7, bacterial/organelle K02992 RP-S7; small subunit ribosomal protein S7 D Clopa_4498 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Clopa_4476 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Clopa_4513 ribosomal protein S10, bacterial/organelle K02946 RP-S10; small subunit ribosomal protein S10 D Clopa_4485 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Clopa_4517 ribosomal protein S12, bacterial/organelle K02950 RP-S12; small subunit ribosomal protein S12 D Clopa_4486 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Clopa_4499 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Clopa_2597 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Clopa_2481 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Clopa_4503 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Clopa_4891 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Clopa_4508 ribosomal protein S19, bacterial/organelle K02965 RP-S19; small subunit ribosomal protein S19 D Clopa_2185 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Clopa_2200 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Clopa_4524 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Clopa_4509 ribosomal protein L2, bacterial/organellar K02886 RP-L2; large subunit ribosomal protein L2 D Clopa_4512 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3 D Clopa_4511 50S ribosomal protein L4, bacterial/organelle K02926 RP-L4; large subunit ribosomal protein L4 D Clopa_4500 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Clopa_4497 ribosomal protein L6, bacterial type K02933 RP-L6; large subunit ribosomal protein L6 D Clopa_4883 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Clopa_4522 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Clopa_4525 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Clopa_4521 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Clopa_4477 ribosomal protein L13, bacterial type K02871 RP-L13; large subunit ribosomal protein L13 D Clopa_4502 ribosomal protein L14, bacterial/organelle K02874 RP-L14; large subunit ribosomal protein L14 D Clopa_4493 ribosomal protein L15, bacterial/organelle K02876 RP-L15; large subunit ribosomal protein L15 D Clopa_4505 ribosomal protein L16, bacterial/organelle K02878 RP-L16; large subunit ribosomal protein L16 D Clopa_4482 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Clopa_4496 ribosomal protein L18, bacterial type K02881 RP-L18; large subunit ribosomal protein L18 D Clopa_2485 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Clopa_3091 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Clopa_2169 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Clopa_4507 ribosomal protein L22, bacterial type K02890 RP-L22; large subunit ribosomal protein L22 D Clopa_4510 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Clopa_4501 ribosomal protein L24, bacterial/organelle K02895 RP-L24; large subunit ribosomal protein L24 D Clopa_2171 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Clopa_2460 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Clopa_4504 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Clopa_4494 ribosomal protein L30, bacterial/organelle K02907 RP-L30; large subunit ribosomal protein L30 D Clopa_0378 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Clopa_2472 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Clopa_4528 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Clopa_4911 ribosomal protein L34, bacterial type K02914 RP-L34; large subunit ribosomal protein L34 D Clopa_3092 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Clopa_4487 ribosomal protein L36, bacterial type K02919 RP-L36; large subunit ribosomal protein L36 D Clopa_3054 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D Clopa_3680 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D Clopa_4518 ribosomal protein HS6-type (S12/L30/L7a) K07590 RP-L7A; large subunit ribosomal protein L7A D Clopa_0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_4550 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0148 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0172 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_3438 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0110 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0181 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0129 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_4555 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0178 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_4552 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_3440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0127 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0146 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0109 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0128 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0171 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0136 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_4551 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_3439 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0180 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cpas03009] D Clopa_2475 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clopa_2208 GTP-binding protein Era K03595 era; GTPase D Clopa_2172 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Clopa_2589 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Clopa_2833 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D Clopa_4526 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D Clopa_1444 pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Clopa_2452 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Clopa_2464 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Clopa_2197 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Clopa_4904 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Clopa_2899 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Clopa_0201 putative S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Clopa_2826 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Clopa_4534 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Clopa_4775 rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Clopa_2453 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Clopa_3569 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Clopa_2233 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Clopa_2672 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Clopa_3302 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Clopa_2177 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clopa_2881 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clopa_3628 pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D Clopa_4326 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Clopa_0126 acetyltransferase, ribosomal protein N-acetylase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D Clopa_2483 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Clopa_2602 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Clopa_2196 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Clopa_2168 ribonuclease G and E K08301 rng; ribonuclease G [EC:3.1.26.-] D Clopa_2409 RNAse H-fold protein YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Clopa_4536 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Clopa_3173 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_4086 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_2617 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clopa_2456 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clopa_2439 ribosome-associated GTPase EngA K03977 engA; GTPase D Clopa_2487 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D Clopa_3010 GTP-binding protein HflX K03665 hflX; GTPase D Clopa_0385 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Clopa_2332 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Clopa_2593 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Clopa_2588 hypothetical protein K09748 rimP; ribosome maturation factor RimP D Clopa_0003 hypothetical protein K14761 rlbA; ribosome-associated protein D Clopa_2205 metalloprotein, YbeY/UPF0054 family K07042 ybeY; probable rRNA maturation factor D Clopa_2173 putative RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein D Clopa_4359 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D Clopa_2901 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Clopa_2471 putative metal-binding protein, possibly nucleic-acid binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cpas03016] D Clopa_4789 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Clopa_0152 metal-dependent hydrolase, beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Clopa_0168 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Clopa_3348 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clopa_3510 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clopa_0273 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clopa_1241 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clopa_0244 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clopa_3243 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clopa_4560 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clopa_2336 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clopa_2407 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clopa_2342 putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clopa_4637 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clopa_4558 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clopa_3095 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clopa_0020 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clopa_4537 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clopa_3126 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clopa_0693 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clopa_2335 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clopa_3089 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clopa_3088 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clopa_0750 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clopa_1231 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clopa_1193 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Clopa_2199 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Clopa_1649 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Clopa_4478 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Clopa_2133 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Clopa_2595 tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Clopa_3187 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_2403 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_0206 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_0385 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Clopa_2661 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Clopa_4906 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Clopa_4905 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Clopa_0411 selenium donor protein K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Clopa_4910 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Clopa_2221 Bacterial RNase P class A K01978 rnpB; M1 RNA D Clopa_1455 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Clopa_0516 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Clopa_0265 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Clopa_3262 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Clopa_1536 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Clopa_1929 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Clopa_0094 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Clopa_4562 putative TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Clopa_2664 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Clopa_2198 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Clopa_4002 methyltransferase family protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Clopa_2484 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Clopa_2218 putative SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Clopa_3640 putative rRNA methylase SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Clopa_3090 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D Clopa_3186 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Clopa_4098 putative ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Clopa_2322 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Clopa_3253 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Clopa_0683 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Clopa_0684 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Clopa_0754 putative Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clopa_0934 putative Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clopa_1108 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clopa_1275 uncharacterized Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clopa_1378 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clopa_3686 putative Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clopa_3794 putative Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clopa_2323 tRNA-guanine transglycosylase, queuosine-34-forming K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Clopa_0207 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clopa_4567 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Clopa_4325 universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Clopa_1410 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Clopa_4324 ATPase, YjeE family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Clopa_1838 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Clopa_2468 putative nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Clopa_3630 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clopa_2598 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cpas03012] D Clopa_2592 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Clopa_4683 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Clopa_3093 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Clopa_1416 ATPase component of ABC transporters with duplicated ATPase domain K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Clopa_0508 ATPase component of ABC transporters with duplicated ATPase domain K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Clopa_2578 translation elongation factor Ts K02357 tsf; elongation factor Ts D Clopa_4514 translation elongation factor TU K02358 tuf; elongation factor Tu D Clopa_4529 translation elongation factor TU K02358 tuf; elongation factor Tu D Clopa_4515 translation elongation factor EF-G K02355 fusA; elongation factor G D Clopa_0382 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Clopa_2580 ribosome recycling factor K02838 frr; ribosome recycling factor D Clopa_0381 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Clopa_4588 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Clopa_4488 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Clopa_2843 translation elongation factor P K02356 efp; elongation factor P D Clopa_4357 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D Clopa_1197 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:cpas03110] D Clopa_1605 ATP-dependent Clp protease ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Clopa_3446 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Clopa_4544 ATPase with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Clopa_1637 endopeptidase Clp ATP-binding regulatory subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Clopa_4070 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG D Clopa_2193 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clopa_1430 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clopa_2194 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Clopa_1245 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ D Clopa_3103 disulfide bond chaperone K04083 hslO; molecular chaperone Hsp33 D Clopa_2192 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D Clopa_4880 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D Clopa_1429 Co-chaperonin GroES K04078 groES; chaperonin GroES D Clopa_4589 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Clopa_3181 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D Clopa_4565 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clopa_3970 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clopa_1132 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clopa_4385 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Clopa_1735 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Clopa_0037 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Clopa_1981 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Clopa_1721 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Clopa_1736 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Clopa_0038 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Clopa_1982 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Clopa_0515 putative component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Clopa_4621 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Clopa_4586 parvulin-like peptidyl-prolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Clopa_0169 parvulin-like peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Clopa_4456 thioredoxin K03671 TXN; thioredoxin D Clopa_4641 Glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:cpas04131] D Clopa_3335 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Clopa_1119 hypothetical protein K07192 FLOT; flotillin D Clopa_0614 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Clopa_3783 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Clopa_3636 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clopa_1319 phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clopa_3573 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_3255 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_0640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_4070 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG D Clopa_3452 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome [BR:cpas03051] D Clopa_4070 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:cpas03032] D Clopa_2246 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clopa_4582 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clopa_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clopa_4881 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Clopa_4825 DNA replication protein K02315 dnaC; DNA replication protein DnaC D Clopa_2518 DNA replication protein K02315 dnaC; DNA replication protein DnaC D Clopa_2215 DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D Clopa_4892 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_4304 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_0329 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3153 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3215 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_1412 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3392 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3575 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clopa_4765 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clopa_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clopa_2184 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clopa_0191 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clopa_0103 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clopa_2488 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Clopa_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clopa_1447 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clopa_3144 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clopa_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clopa_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clopa_2994 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Clopa_2995 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Clopa_2575 DNA topoisomerase I, bacterial K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Clopa_4802 topoisomerase IA K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D Clopa_0284 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cpas03036] D Clopa_2246 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clopa_2475 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clopa_3783 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Clopa_1119 hypothetical protein K07192 FLOT; flotillin D Clopa_2642 DNA/RNA helicase, superfamily II, SNF2 family K14440 SMARCAL1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-] D Clopa_4582 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clopa_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clopa_2660 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clopa_2477 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Clopa_2715 hypothetical protein K05896 scpA; segregation and condensation protein A D Clopa_2714 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D Clopa_2421 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Clopa_4578 Septum formation initiator K13052 divIC; cell division protein DivIC D Clopa_3593 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clopa_2601 DNA segregation ATPase, FtsK/SpoIIIE family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Clopa_2898 hypothetical protein K03586 ftsL; cell division protein FtsL D Clopa_2892 cell division septal protein K03589 ftsQ; cell division protein FtsQ D Clopa_2893 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Clopa_3592 cell division protein K09811 ftsX; cell division transport system permease protein D Clopa_2422 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clopa_3087 hypothetical protein K09888 zapA; cell division protein ZapA D Clopa_4473 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clopa_2161 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Clopa_2162 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Clopa_2163 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Clopa_2885 DivIVA domain protein K04074 divIVA; cell division initiation protein D Clopa_2887 hypothetical protein K09772 sepF; cell division inhibitor SepF D Clopa_4372 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_1061 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_2154 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_2155 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Clopa_2156 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Clopa_1651 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Clopa_1652 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Clopa_4902 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Clopa_4901 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clopa_4903 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clopa_2994 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Clopa_2995 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Clopa_4905 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Clopa_4904 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Clopa_2721 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Clopa_1861 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D Clopa_2774 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D Clopa_2820 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D Clopa_2265 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D Clopa_2871 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D Clopa_3005 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D Clopa_2648 site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D Clopa_4583 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D Clopa_2280 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Clopa_0960 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Clopa_1640 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein D Clopa_3578 hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cpas03400] D Clopa_0542 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Clopa_4415 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Clopa_1427 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Clopa_1277 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clopa_2399 DNA helicase, Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Clopa_3841 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clopa_1527 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clopa_0242 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clopa_0132 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clopa_2291 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Clopa_2389 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Clopa_0543 apurinic endonuclease APN1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Clopa_2989 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clopa_1447 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clopa_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clopa_3588 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Clopa_3589 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Clopa_4731 putative endonuclease K03703 uvrC; excinuclease ABC subunit C D Clopa_3583 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Clopa_1666 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1670 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_2259 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_3321 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1446 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_1133 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clopa_4520 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clopa_4519 DNA-directed RNA polymerase, beta'' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clopa_4483 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clopa_2446 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Clopa_4587 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Clopa_2663 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Clopa_3056 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clopa_2662 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Clopa_2831 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Clopa_2830 exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Clopa_3575 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clopa_4765 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clopa_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clopa_2184 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clopa_0191 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clopa_0103 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clopa_4892 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_4304 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_0329 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3153 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3215 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_1412 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3392 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3144 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clopa_4364 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clopa_2604 protein RecA K03553 recA; recombination protein RecA D Clopa_2320 Holliday junction DNA helicase, RuvA subunit K03550 ruvA; holliday junction DNA helicase RuvA D Clopa_2321 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Clopa_2448 primosomal protein N'' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Clopa_3678 ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50 D Clopa_3679 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D Clopa_4543 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Clopa_0004 recF protein K03629 recF; DNA replication and repair protein RecF D Clopa_2463 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clopa_2209 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Clopa_0105 recombination protein RecR K06187 recR; recombination protein RecR D Clopa_2823 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Clopa_2341 recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Clopa_2340 helicase-exonuclease AddAB, AddB subunit K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Clopa_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clopa_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clopa_2575 DNA topoisomerase I, bacterial K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Clopa_4582 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clopa_2514 recombinational DNA repair protein (RecE pathway) K07455 recT; recombination protein RecT D Clopa_2618 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Clopa_2264 nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Clopa_1320 nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Clopa_1568 nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Clopa_2658 SOS regulatory protein LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Clopa_0551 SOS response transcriptional repressor, RecA-mediated autopeptidase K01356 lexA; repressor LexA [EC:3.4.21.88] D Clopa_3170 hypothetical protein K03565 recX; regulatory protein D Clopa_3234 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cpas03029] D Clopa_2592 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Clopa_4683 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Clopa_3093 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Clopa_2578 translation elongation factor Ts K02357 tsf; elongation factor Ts D Clopa_4514 translation elongation factor TU K02358 tuf; elongation factor Tu D Clopa_4529 translation elongation factor TU K02358 tuf; elongation factor Tu D Clopa_4515 translation elongation factor EF-G K02355 fusA; elongation factor G D Clopa_4652 DNA/RNA helicase, superfamily II K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D Clopa_2208 GTP-binding protein Era K03595 era; GTPase D Clopa_0750 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clopa_1231 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clopa_1241 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clopa_2336 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clopa_4558 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clopa_3243 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clopa_0267 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clopa_1358 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clopa_1450 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clopa_1357 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clopa_1451 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clopa_0268 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clopa_1359 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clopa_1449 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clopa_0266 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clopa_1230 hypothetical protein K23499 RMND1; required for meiotic nuclear division protein 1 D Clopa_4892 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_4304 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_0329 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3153 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3215 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_1412 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_3392 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clopa_2193 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clopa_2192 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D Clopa_1430 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clopa_1429 Co-chaperonin GroES K04078 groES; chaperonin GroES D Clopa_2194 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Clopa_1245 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ D Clopa_3187 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_2403 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_0206 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_4908 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clopa_4070 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cpas02000] D Clopa_4598 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4443 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_3939 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4444 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4599 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_3938 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4649 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_0402 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_0403 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4114 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4648 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clopa_4937 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clopa_4270 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clopa_1620 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clopa_1013 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clopa_3740 ATPase component of ABC transporters with duplicated ATPase domain K18231 msr; macrolide transport system ATP-binding/permease protein D Clopa_1841 ATPase component of ABC transporters with duplicated ATPase domain K15738 uup; ABC transport system ATP-binding/permease protein D Clopa_3459 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Clopa_3458 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Clopa_3482 ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D Clopa_3481 ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein D Clopa_3480 ABC-type spermidine/putrescine transport system, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Clopa_3719 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4139 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4155 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_1150 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_4345 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_3692 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D Clopa_3718 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_4138 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_1147 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_4343 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_3691 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D Clopa_1148 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_3717 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_4137 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_4344 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_3694 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clopa_1292 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Clopa_0051 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Clopa_3834 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Clopa_1293 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Clopa_0052 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Clopa_3832 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Clopa_3833 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clopa_0053 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clopa_1294 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clopa_2375 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D Clopa_2374 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein D Clopa_2373 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein D Clopa_2372 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Clopa_4633 ABC-type uncharacterized transport system, periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Clopa_4635 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Clopa_4632 ABC-type spermidine/putrescine transport system, permease component I K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D Clopa_4634 ABC-type spermidine/putrescine transport system, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Clopa_0154 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D Clopa_4653 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D Clopa_0153 ABC-type proline/glycine betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D Clopa_0156 ABC-type proline/glycine betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D Clopa_4654 glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Clopa_0155 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Clopa_3331 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clopa_4143 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clopa_4146 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clopa_2311 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clopa_0935 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clopa_4194 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clopa_3326 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clopa_4144 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clopa_0249 ABC-type anion transport system, duplicated permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clopa_2616 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clopa_0936 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clopa_2312 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clopa_4193 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clopa_3327 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clopa_4142 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clopa_4145 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clopa_0250 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clopa_4613 ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clopa_3601 ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clopa_3946 ABC-type sugar transport system, periplasmic component K25086 musE; maltose transport system substrate-binding protein D Clopa_3900 hypothetical protein K25086 musE; maltose transport system substrate-binding protein D Clopa_3947 permease component of ABC-type sugar transporter K25087 musF; maltose transport system permease protein D Clopa_3899 permease component of ABC-type sugar transporter K25087 musF; maltose transport system permease protein D Clopa_3948 ABC-type sugar transport system, permease component K25088 musG; maltose transport system permease protein D Clopa_3898 ABC-type sugar transport system, permease component K25088 musG; maltose transport system permease protein D Clopa_3931 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clopa_3930 permease component of ABC-type sugar transporter K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Clopa_3929 ABC-type sugar transport system, permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Clopa_0945 ABC-type sugar transport system, periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein D Clopa_0946 permease component of ABC-type sugar transporter K10237 thuF; trehalose/maltose transport system permease protein D Clopa_0947 ABC-type sugar transport system, permease component K10238 thuG; trehalose/maltose transport system permease protein D Clopa_3600 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein D Clopa_3936 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein D Clopa_3599 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein D Clopa_3935 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein D Clopa_3598 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein D Clopa_3934 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein D Clopa_4285 ABC-type sugar transport system, periplasmic component K17213 K17213; inositol transport system substrate-binding protein D Clopa_4001 ABC-type sugar transport system, periplasmic component K10120 msmE; fructooligosaccharide transport system substrate-binding protein D Clopa_4000 permease component of ABC-type sugar transporter K10121 msmF; fructooligosaccharide transport system permease protein D Clopa_3999 ABC-type sugar transport system, permease component K10122 msmG; fructooligosaccharide transport system permease protein D Clopa_0690 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Clopa_0688 permease component of ABC-type sugar transporter K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Clopa_0686 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Clopa_0689 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Clopa_0687 ATPase component of ABC-type sugar transporter K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Clopa_0393 putative ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Clopa_0547 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D Clopa_0395 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D Clopa_0548 putative ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D Clopa_0396 putative ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D Clopa_0394 ATPase component of uncharacterized ABC-type transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Clopa_0546 ATPase component of uncharacterized ABC-type transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Clopa_1960 TIGR00245 family protein K02069 STAR2; UDP-glucose/iron transport system permease protein D Clopa_1959 ABC-type uncharacterized transport system, ATPase component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D Clopa_0697 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clopa_1014 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clopa_3706 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clopa_3836 transcriptional regulator K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clopa_0301 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clopa_1016 permease component of ABC-type sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D Clopa_3704 permease component of ABC-type sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D Clopa_0698 permease component of ABC-type sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D Clopa_1017 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clopa_3703 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clopa_0699 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clopa_2433 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clopa_2434 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D Clopa_2435 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D Clopa_2436 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Clopa_3534 ABC-type phosphate/phosphonate transport system, periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein D Clopa_3531 ABC-type phosphate/phosphonate transport system, permease component K02042 phnE; phosphonate transport system permease protein D Clopa_3532 ABC-type phosphate/phosphonate transport system, permease component K02042 phnE; phosphonate transport system permease protein D Clopa_3533 phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Clopa_4278 periplasmic component of amino acid ABC-type transporter/signal transduction system K10036 glnH; glutamine transport system substrate-binding protein D Clopa_4277 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K10037 glnP; glutamine transport system permease protein D Clopa_4276 ABC-type polar amino acid transport system, ATPase component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D Clopa_0461 periplasmic component of amino acid ABC-type transporter/signal transduction system K02424 tcyA; L-cystine transport system substrate-binding protein D Clopa_0462 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K10009 tcyB; L-cystine transport system permease protein D Clopa_0463 ABC-type polar amino acid transport system, ATPase component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Clopa_4216 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D Clopa_3667 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D Clopa_3665 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D Clopa_3666 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D Clopa_4855 periplasmic component of amino acid ABC-type transporter/signal transduction system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Clopa_0644 periplasmic component of amino acid ABC-type transporter/signal transduction system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Clopa_4857 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein D Clopa_4858 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein D Clopa_0645 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein D Clopa_0646 ABC-type polar amino acid transport system, ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Clopa_3108 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D Clopa_1452 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D Clopa_3112 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein D Clopa_3111 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein D Clopa_3110 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D Clopa_3109 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D Clopa_1034 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clopa_4176 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clopa_1035 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clopa_4175 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clopa_1036 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clopa_4174 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clopa_4173 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clopa_1037 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clopa_1038 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D Clopa_4404 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clopa_3478 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clopa_3487 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clopa_4402 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein D Clopa_3468 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein D Clopa_3486 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein D Clopa_4403 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Clopa_3485 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Clopa_4796 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D Clopa_4392 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein D Clopa_4391 ATPase component of Mn/Zn ABC-type transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Clopa_0778 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D Clopa_0777 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Clopa_0779 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D Clopa_0773 cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Clopa_0166 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Clopa_2101 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Clopa_1515 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Clopa_3714 putative membrane protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D Clopa_4479 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Clopa_3716 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Clopa_0671 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Clopa_0676 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Clopa_4481 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clopa_4480 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clopa_0675 ATPase component of various ABC-type transport systems with duplicated ATPase domain K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clopa_3715 ATPase component of various ABC-type transport systems with duplicated ATPase domain K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clopa_0670 ATPase component of various ABC-type transport systems with duplicated ATPase domain K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clopa_4322 ABC-type metal ion transport system, periplasmic component/surface adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Clopa_3045 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Clopa_0175 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Clopa_0174 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Clopa_0225 ABC-type multidrug transport system, permease component K25181 ybhS; drug efflux transport system permease protein D Clopa_0224 ABC-type multidrug transport system, ATPase component K25182 ybhF; drug efflux transport system ATP-binding protein D Clopa_0223 multidrug resistance efflux pump K25183 ybhG; membrane fusion protein YbhG D Clopa_3289 ABC-2 type transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein D Clopa_1318 ABC-type multidrug transport system, permease component K25142 lnrN; linearmycin/streptolysin S transport system permease protein D Clopa_1317 ABC-type multidrug transport system, permease component K25143 lnrM; linearmycin/streptolysin S transport system permease protein D Clopa_3290 ABC-type multidrug transport system, permease component K25143 lnrM; linearmycin/streptolysin S transport system permease protein D Clopa_3291 ABC-type multidrug transport system, ATPase component K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D Clopa_1316 ABC-type multidrug transport system, ATPase component K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D Clopa_4690 ABC-type transport system, involved in lipoprotein release, permease component K11632 bceB; bacitracin transport system permease protein D Clopa_4691 ABC-type antimicrobial peptide transport system, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein D Clopa_3726 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein D Clopa_3727 ABC-type multidrug transport system, ATPase component K25148 berA; beta-exotoxin I transport system ATP-binding protein D Clopa_0889 ABC-type transport system, involved in lipoprotein release, permease component K09808 lolC_E; lipoprotein-releasing system permease protein D Clopa_0890 ABC-type antimicrobial peptide transport system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Clopa_3592 cell division protein K09811 ftsX; cell division transport system permease protein D Clopa_3593 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clopa_0661 ABC-type uncharacterized transport system, permease component K25154 evrC; viologen exporter family transport system permease protein D Clopa_4759 ABC-type uncharacterized transport system, permease component K25154 evrC; viologen exporter family transport system permease protein D Clopa_4760 ABC-type uncharacterized transport system, permease component K25155 evrB; viologen exporter family transport system permease protein D Clopa_0660 ABC-type uncharacterized transport system, permease component K25155 evrB; viologen exporter family transport system permease protein D Clopa_0659 ABC-type uncharacterized transport system, ATPase component K25156 evrA; viologen exporter family transport system ATP-binding protein D Clopa_4761 ABC-type uncharacterized transport system, ATPase component K25156 evrA; viologen exporter family transport system ATP-binding protein D Clopa_1543 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_1715 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_0635 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_3259 putative permease (DUF2074) K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_1372 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_0118 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_0978 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_1363 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_1716 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_3789 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_4702 ABC-type polysaccharide/polyol phosphate export systems, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Clopa_3044 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_3258 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_1371 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_4602 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_1362 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_1542 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_3790 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_4701 daunorubicin resistance ABC transporter ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_0119 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_0979 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_0636 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clopa_4425 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_4794 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_4818 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_4686 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_0022 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_3964 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_3618 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_3272 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_3274 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_0973 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_1019 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_0021 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_0628 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_0295 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Clopa_4424 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_4793 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_4817 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_4687 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_0023 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_3951 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_3965 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_3619 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_3273 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_0974 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_1094 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_0626 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_0294 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clopa_4675 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Clopa_4102 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump D Clopa_4159 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump D Clopa_1093 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D Clopa_3903 oligosaccharide:H+ symporter K02532 lacY; MFS transporter, OHS family, lactose permease D Clopa_1852 nitrate/nitrite transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Clopa_3851 arabinose efflux permease family protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D Clopa_4698 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Clopa_0756 arabinose efflux permease family protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D Clopa_1134 arabinose efflux permease family protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D Clopa_0692 arabinose efflux permease family protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D Clopa_3742 arabinose efflux permease family protein K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter D Clopa_3560 arabinose efflux permease family protein K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter D Clopa_1137 arabinose efflux permease family protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Clopa_0638 arabinose efflux permease family protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Clopa_3452 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family D Clopa_4689 Major Facilitator Superfamily transporter K08222 yqgE; MFS transporter, YQGE family, putative transporter D Clopa_3595 Major Facilitator Superfamily transporter K08222 yqgE; MFS transporter, YQGE family, putative transporter D Clopa_4464 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Clopa_2609 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr D Clopa_3914 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_3915 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_0195 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_2088 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Clopa_2997 PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D Clopa_1029 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Clopa_3683 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D Clopa_0496 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D Clopa_2086 PTS system, alpha-glucoside-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Clopa_3918 PTS system, glucose-like IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Clopa_4842 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIA component/PTS system, fructose subfamily, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Clopa_4466 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Clopa_1398 mannitol/fructose-specific phosphotransferase system, IIA domain protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D Clopa_1396 PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D Clopa_1145 phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D Clopa_1143 phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D Clopa_1144 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D Clopa_1406 phosphotransferase system sorbitol-specific component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Clopa_1405 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Clopa_1404 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D Clopa_0713 phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D Clopa_3766 phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D Clopa_0714 phosphotransferase system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D Clopa_3765 phosphotransferase system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D Clopa_3764 phosphotransferase system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D Clopa_0715 phosphotransferase system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D Clopa_4460 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Clopa_3924 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Clopa_4461 PTS system, mannose/fructose/sorbose family, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Clopa_3925 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Clopa_4459 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component D Clopa_3923 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component D Clopa_3910 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component D Clopa_4458 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component D Clopa_3922 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID K02796 manZ; mannose PTS system EIID component D Clopa_3909 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID K02796 manZ; mannose PTS system EIID component D Clopa_3907 phosphotransferase system, mannose/fructose-specific component IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-] D Clopa_1339 PTS system, mannose/fructose/sorbose family, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D Clopa_1340 PTS system, mannose/fructose/sorbose family, IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D Clopa_1341 PTS system, mannose/fructose/sorbose family, IIC component K02814 sorA; sorbose PTS system EIIC component D Clopa_1342 PTS system, mannose/fructose/sorbose family, IID component K02815 sorM; sorbose PTS system EIID component D Clopa_3912 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D Clopa_4467 PTS system, fructose subfamily, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Clopa_0920 MIP family channel protein K02440 glpF; glycerol uptake facilitator D Clopa_2503 Ion channel K10716 kch; voltage-gated potassium channel D Clopa_4210 ammonium transporter K03320 amt; ammonium transporter, Amt family D Clopa_3732 uncharacterized protein containing a von Willebrand factor type A (vWA) domain K07114 yfbK; Ca-activated chloride channel homolog D Clopa_3968 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Clopa_4895 small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel D Clopa_4890 Mg/Co/Ni transporter MgtE with CBS domain K06213 mgtE; magnesium transporter D Clopa_0196 flagellar motor component K02556 motA; chemotaxis protein MotA D Clopa_0197 flagellar motor protein K02557 motB; chemotaxis protein MotB D Clopa_4394 magnesium Mg(2+) and cobalt Co(2+) transport protein CorA K03284 corA; magnesium transporter D Clopa_0737 Mg2+/Co2+ transporter K03284 corA; magnesium transporter D Clopa_2060 Integral membrane protein possibly involved in chromosome condensation K06199 crcB; fluoride exporter D Clopa_2061 crcB protein K06199 crcB; fluoride exporter D Clopa_4204 cation transport ATPase K08364 merP; periplasmic mercuric ion binding protein D Clopa_1844 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clopa_4331 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clopa_0199 putative effector of murein hydrolase LrgA K06518 cidA; holin-like protein D Clopa_0704 glycoside/pentoside/hexuronide transporter K16209 lacS; lactose/raffinose/galactose permease D Clopa_0537 gamma-aminobutyrate permease-like transporter K11735 gabP; GABA permease D Clopa_3507 spore germination protein, amino acid permease K06296 gerKB; spore germination protein KB D Clopa_0807 spore germination protein, amino acid permease K06296 gerKB; spore germination protein KB D Clopa_1857 spore germination protein, amino acid permease K06296 gerKB; spore germination protein KB D Clopa_2776 spore germination protein, amino acid permease K06296 gerKB; spore germination protein KB D Clopa_0064 spore germination protein, amino acid permease K06296 gerKB; spore germination protein KB D Clopa_0384 putative divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family D Clopa_4787 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Clopa_2072 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Clopa_1222 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D Clopa_4873 gluconate transporter K06157 idnT; Gnt-II system L-idonate transporter D Clopa_4875 gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter D Clopa_3280 gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter D Clopa_3739 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D Clopa_4746 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D Clopa_3671 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D Clopa_0818 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D Clopa_2134 L-lactate transport K03303 lutP; lactate permease D Clopa_4280 Na+/H+ dicarboxylate symporter K11102 gltP; proton glutamate symport protein D Clopa_1279 Kef-type K+ transport system, membrane component K26730 napA; Na+:H+ antiporter D Clopa_2224 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Clopa_1278 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family D Clopa_1823 chromate transporter, chromate ion transporter family K07240 chrA; chromate transporter D Clopa_1390 chromate transporter, chromate ion transporter family K07240 chrA; chromate transporter D Clopa_0772 high-affinity nickel-transporter, HoxN/HupN/NixA family K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D Clopa_1722 high-affinity nickel-transporter, HoxN/HupN/NixA family K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D Clopa_1991 high-affinity nickel-transporter, HoxN/HupN/NixA family K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D Clopa_1489 high-affinity nickel-transporter, HoxN/HupN/NixA family K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D Clopa_2621 high affinity sulfate transporter 1 K03321 TC.SULP; sulfate permease, SulP family D Clopa_0390 Mn2+/Fe2-transporter, NRAMP family K03322 mntH; manganese transport protein D Clopa_0651 natural resistance-associated macrophage protein metal ion transporter NRAMP K03322 mntH; manganese transport protein D Clopa_0614 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Clopa_3645 Na+/H+ antiporter NhaD-like permease K03893 arsB; arsenical pump membrane protein D Clopa_0607 arsenical-resistance protein K03325 ACR3; arsenite transporter D Clopa_4584 membrane protein involved in the export of O-antigen and teichoic acid K06409 spoVB; stage V sporulation protein B D Clopa_3300 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D Clopa_3301 putative membrane protein, putative virulence factor K06409 spoVB; stage V sporulation protein B D Clopa_1747 putative permease K24180 mleP; malate permease and related proteins D Clopa_2142 putative permease K24180 mleP; malate permease and related proteins D Clopa_2140 putative permease K24180 mleP; malate permease and related proteins D Clopa_0719 putative branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump D Clopa_0720 putative membrane protein K26606 azlD; branched chain amino acid efflux pump D Clopa_4327 putative membrane protein K23675 fmnP; riboflavin transporter D Clopa_3293 hypothetical protein K16788 niaX; niacin transporter D Clopa_0422 putative membrane protein K22736 VIT; vacuolar iron transporter family protein D Clopa_2893 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Clopa_3977 putative membrane protein K23242 mntP; manganese efflux pump family protein D Clopa_1201 high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter D Clopa_0884 capsular exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Clopa_0894 capsular exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Clopa_0883 capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D Clopa_0845 capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D Clopa_0893 capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D Clopa_3511 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D Clopa_3512 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B D Clopa_1667 tryptophan-rich sensory protein K05770 TSPO; translocator protein D Clopa_2364 putative membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:cpas02044] D Clopa_3353 prepilin signal peptidase PulO-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clopa_2852 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clopa_3415 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clopa_3417 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Clopa_2873 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Clopa_2853 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D Clopa_3416 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D Clopa_3414 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Clopa_3412 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D Clopa_2419 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D Clopa_2179 DNA uptake protein K02237 comEA; competence protein ComEA D Clopa_4390 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Clopa_1654 hypothetical protein K02238 comEC; competence protein ComEC D Clopa_2183 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D Clopa_3431 putative hydrolase (metallo-beta-lactamase superfamily) K02238 comEC; competence protein ComEC D Clopa_4362 putative amidophosphoribosyltransferase K02242 comFC; competence protein ComFC D Clopa_2922 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clopa_1233 uncharacterized protein, cytoplasmic domain of flagellar protein FhlB like protein K04061 flhB2; flagellar biosynthesis protein D Clopa_2937 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF D Clopa_2935 hypothetical protein K02411 fliH; flagellar assembly protein FliH D Clopa_2934 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clopa_2967 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Clopa_2926 flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D Clopa_2925 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clopa_2924 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clopa_2923 flagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D Clopa_4358 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clopa_2328 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D Clopa_4527 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clopa_2329 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Clopa_3631 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clopa_4492 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clopa_2480 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clopa_2478 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clopa_2324 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clopa_4908 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clopa_4247 Sec-independent protein secretion pathway component K03116 tatA; sec-independent protein translocase protein TatA D Clopa_1737 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_0039 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_1983 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Clopa_4246 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Clopa_4248 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_0040 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1984 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1985 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1738 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D Clopa_1739 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:cpas02042] D Clopa_1844 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clopa_4331 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clopa_2059 channel protein, hemolysin III family K11068 hlyIII; hemolysin III D Clopa_3296 Zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] C 02022 Two-component system [BR:cpas02022] D Clopa_2431 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clopa_3660 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clopa_2430 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clopa_3659 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clopa_0286 signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clopa_0285 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07770 cssR; two-component system, OmpR family, response regulator CssR D Clopa_3992 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clopa_3991 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clopa_4591 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD D Clopa_4693 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07668 vicR; two-component system, OmpR family, response regulator VicR D Clopa_4728 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07668 vicR; two-component system, OmpR family, response regulator VicR D Clopa_3182 signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Clopa_2273 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR D Clopa_1270 signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clopa_1308 signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clopa_1269 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18941 arlR; two-component system, OmpR family, response regulator ArlR D Clopa_1309 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18941 arlR; two-component system, OmpR family, response regulator ArlR D Clopa_0975 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D Clopa_1263 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Clopa_1262 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D Clopa_2821 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clopa_1009 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clopa_0625 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clopa_1008 response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clopa_0624 response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clopa_1850 putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Clopa_1415 response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator D Clopa_1851 response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator D Clopa_2972 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clopa_2970 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clopa_2975 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clopa_4281 signal transduction histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D Clopa_4282 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07719 glnL; two-component system, response regulator GlnL D Clopa_0921 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN D Clopa_0700 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN D Clopa_0832 putative regulator of cell autolysis K19694 chiS; two-component system, sensor histidine kinase ChiS D Clopa_4286 signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:cpas02035] D Clopa_2972 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clopa_2969 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clopa_2977 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clopa_2971 chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Clopa_2976 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Clopa_4283 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clopa_2973 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clopa_2975 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clopa_2970 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clopa_0790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clopa_2432 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clopa_2935 hypothetical protein K02411 fliH; flagellar assembly protein FliH D Clopa_2934 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clopa_2933 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Clopa_2926 flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D Clopa_2925 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clopa_2924 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clopa_2923 flagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D Clopa_2922 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clopa_2936 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clopa_2968 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Clopa_2967 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Clopa_2937 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF D Clopa_2927 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D Clopa_2938 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Clopa_2932 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Clopa_2940 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Clopa_2939 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Clopa_2931 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Clopa_2915 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Clopa_2914 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D Clopa_2929 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Clopa_2964 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Clopa_2963 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Clopa_2942 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2944 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2954 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Clopa_2957 flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D Clopa_2958 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS D Clopa_2918 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA D Clopa_0196 flagellar motor component K02556 motA; chemotaxis protein MotA D Clopa_0197 flagellar motor protein K02557 motB; chemotaxis protein MotB D Clopa_0461 periplasmic component of amino acid ABC-type transporter/signal transduction system K02424 tcyA; L-cystine transport system substrate-binding protein D Clopa_2962 hypothetical protein K13626 fliW; flagellar assembly factor FliW D Clopa_2966 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Clopa_2960 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D Clopa_2928 uncharacterized protein, possibly involved in motility K02385 flbD; flagellar protein FlbD D Clopa_2921 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D Clopa_2920 ATPase involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG D Clopa_2419 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D Clopa_2852 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clopa_3415 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clopa_3417 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Clopa_2873 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Clopa_2853 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D Clopa_3416 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D Clopa_3353 prepilin signal peptidase PulO-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clopa_3412 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D Clopa_3414 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cpas04812] D Clopa_4372 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_1061 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_2154 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_1683 hypothetical protein K18640 parM; plasmid segregation protein ParM D Clopa_2422 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clopa_2421 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Clopa_2161 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Clopa_2162 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Clopa_2163 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Clopa_4902 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Clopa_4901 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clopa_4903 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cpas04147] D Clopa_4070 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG D Clopa_3783 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Clopa_3632 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clopa_3636 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clopa_3635 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clopa_3573 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_3255 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_0640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clopa_4837 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Clopa_4640 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Clopa_1119 hypothetical protein K07192 FLOT; flotillin D Clopa_1430 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clopa_2193 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clopa_4421 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_1401 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clopa_0420 IMP dehydrogenase/GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clopa_1431 inosine-5''-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clopa_4514 translation elongation factor TU K02358 tuf; elongation factor Tu D Clopa_4529 translation elongation factor TU K02358 tuf; elongation factor Tu D Clopa_2199 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Clopa_4803 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_2980 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clopa_4013 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_2103 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clopa_4387 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_3269 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_2102 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clopa_4491 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3] D Clopa_2331 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clopa_4158 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clopa_3425 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clopa_3426 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clopa_0433 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Clopa_1053 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Clopa_0706 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Clopa_0922 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clopa_4623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clopa_1199 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Clopa_4720 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clopa_0018 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clopa_0497 AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clopa_2056 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clopa_1422 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Clopa_3634 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clopa_1319 phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cpas02048] D Clopa_1788 helicase, type I site-specific restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Clopa_1786 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Clopa_1785 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Clopa_3144 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clopa_3021 type I restriction-modification system methyltransferase subunit K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Clopa_2246 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clopa_2249 restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D Clopa_0335 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Clopa_3605 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Clopa_0985 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Clopa_1764 looped-hinge helix DNA binding domain, AbrB family K07172 mazE; antitoxin MazE D Clopa_3606 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Clopa_1552 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D Clopa_2281 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D Clopa_3252 death-on-curing family protein K07341 doc; death on curing protein D Clopa_3821 death-on-curing family protein K07341 doc; death on curing protein D Clopa_3820 prevent-host-death family protein K19165 phd; antitoxin Phd D Clopa_1608 uncharacterized protein, YhcH/YjgK/YiaL family K19334 tabA; biofilm protein TabA D Clopa_2422 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clopa_4372 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_1061 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_2154 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clopa_2994 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Clopa_2995 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Clopa_3348 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clopa_3187 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_2403 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clopa_0206 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cpas01504] D Clopa_3851 arabinose efflux permease family protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D Clopa_3740 ATPase component of ABC transporters with duplicated ATPase domain K18231 msr; macrolide transport system ATP-binding/permease protein D Clopa_1137 arabinose efflux permease family protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Clopa_4919 acetyltransferase (isoleucine patch superfamily) K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D Clopa_3182 signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Clopa_2273 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR D Clopa_4258 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D Clopa_0521 transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D Clopa_0735 transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cpas00537] D Clopa_4837 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cpas03100] D Clopa_0012 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clopa_4553 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clopa_0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_1460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_1468 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_0072 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_0115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_1477 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clopa_3437 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clopa_4559 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clopa_4549 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clopa_3101 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clopa_4827 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clopa_0183 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clopa_3098 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clopa_1243 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clopa_1463 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clopa_1470 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clopa_0111 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clopa_4829 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clopa_1674 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clopa_0114 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1467 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1476 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1459 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_0113 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1466 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1473 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_3099 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_4531 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clopa_1462 tRNA-His K14226 tRNA-His; tRNA His D Clopa_1469 tRNA-His K14226 tRNA-His; tRNA His D Clopa_0179 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clopa_1289 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_2067 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_4571 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_4576 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_1858 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_0112 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_1465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_1472 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clopa_1461 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_0130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_0149 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_1464 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_1471 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_1474 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clopa_0011 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4554 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4569 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4574 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4570 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_4575 tRNA-Met K14230 tRNA-Met; tRNA Met D Clopa_0138 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clopa_3100 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clopa_0182 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clopa_1458 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clopa_4604 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clopa_1475 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clopa_0101 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clopa_0024 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clopa_0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clopa_0095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clopa_4367 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clopa_4826 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clopa_4530 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clopa_4871 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clopa_4320 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Clopa_4369 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clopa_4366 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clopa_3102 tRNA-Val K14237 tRNA-Val; tRNA Val D Clopa_4368 tRNA-Val K14237 tRNA-Val; tRNA Val D Clopa_4828 tRNA-Val K14237 tRNA-Val; tRNA Val D Clopa_0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0178 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_4552 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_3440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0127 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0146 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clopa_0109 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0128 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0171 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0136 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_4551 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_3439 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0180 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clopa_0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_4550 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0148 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0172 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_3438 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0110 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0181 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0129 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_4555 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clopa_0102 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D Clopa_2221 Bacterial RNase P class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Clopa_3561 aldo/keto reductase, diketogulonate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D Clopa_3737 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D Clopa_0415 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Clopa_0437 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Clopa_1074 putative dinucleotide-binding enzyme K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D Clopa_1671 putative flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D Clopa_1032 putative flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D Clopa_4429 putative NADPH-quinone reductase (modulator of drug activity B) K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D Clopa_3649 NADH:flavin oxidoreductase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D Clopa_3451 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Clopa_4463 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Clopa_0464 putative hydrolase or acyltransferase of alpha/beta superfamily K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D Clopa_0139 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Clopa_4718 peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Clopa_0056 hydrogenase, Fe-only K00532 E1.12.7.2; ferredoxin hydrogenase [EC:1.12.7.2] D Clopa_1091 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Clopa_1192 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D Clopa_4790 ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2] D Clopa_1726 putative multicopper oxidase K06324 cotA; spore coat protein A, manganese oxidase [EC:1.16.3.3] D Clopa_0047 putative multicopper oxidase K06324 cotA; spore coat protein A, manganese oxidase [EC:1.16.3.3] D Clopa_4952 putative multicopper oxidase K06324 cotA; spore coat protein A, manganese oxidase [EC:1.16.3.3] D Clopa_1424 2-polyprenylphenol hydroxylase-like oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Clopa_2139 nitrogenase-associated protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D Clopa_0270 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Clopa_4735 glycyl-radical enzyme activator family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clopa_4018 glycyl-radical enzyme activator family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clopa_4022 glycyl-radical enzyme activator family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clopa_0162 pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clopa_0597 glycyl-radical enzyme activator family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clopa_4617 pyruvate formate lyase activating protein-like uncharacterized Fe-S protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clopa_4084 methyltransferase, cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Clopa_0484 trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D Clopa_1698 methylase involved in ubiquinone/menaquinone biosynthesis K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D Clopa_4393 putative N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Clopa_3203 acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D Clopa_3756 acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D Clopa_3775 putative beta-lysine N-acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264] D Clopa_3529 putative beta-lysine N-acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264] D Clopa_4048 acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D Clopa_3804 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Clopa_3523 hypothetical protein K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Clopa_3784 putative glycosylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D Clopa_1820 glycosyltransferase, MGT family K25230 yjiC; NDP-glycosyltransferase [EC:2.4.1.384] D Clopa_3026 glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Clopa_4801 putative molybdenum utilization protein ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-] D Clopa_0771 NCAIR mutase-like protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Clopa_0098 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Clopa_1089 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Clopa_3738 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D Clopa_2462 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Clopa_0561 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7] D Clopa_4766 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_1692 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_2688 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_1811 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_1708 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_0425 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_1531 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_3856 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_4922 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_4769 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clopa_4542 putative nucleic-acid-binding protein (contains the HHH domain) K07067 disA; diadenylate cyclase [EC:2.7.7.85] D Clopa_4451 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Clopa_1353 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Clopa_3018 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D Clopa_1832 serine kinase of the HPr protein, regulates carbohydrate metabolism K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Clopa_4545 arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Clopa_1660 putative phosphatase, C-terminal domain of histone macro H2A1 like protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Clopa_3254 acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Clopa_4568 stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D Clopa_0895 capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Clopa_1835 putative metal-dependent phosphoesterase, PHP family K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Clopa_3767 putative metal-dependent phosphoesterase, PHP family K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Clopa_4884 putative signaling protein consisting of a modified GGDEF domain and a DHH domain protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D Clopa_2204 putative domain HDIG-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Clopa_0255 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Clopa_0257 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D Clopa_0954 family 31 glycosyl hydrolase, alpha-glucosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199] D Clopa_4747 putative glycosyl hydrolase K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-] D Clopa_4733 putative glycosyl hydrolase K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-] D Clopa_3339 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D Clopa_0431 N-acyl-D-aspartate/D-glutamate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D Clopa_2449 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Clopa_1110 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Clopa_1115 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Clopa_0650 putative xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clopa_2122 putative xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clopa_3022 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D Clopa_0408 endoribonuclease L-PSP, putative K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Clopa_4129 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clopa_0386 protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Clopa_1774 putative TIM-barrel fold metal-dependent hydrolase K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52] D Clopa_4290 myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53] D Clopa_3609 yjeF-like protein, hydroxyethylthiazole kinase-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Clopa_0406 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D Clopa_0770 TIGR00268 family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Clopa_4087 TIGR00268 family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Clopa_2222 cystathionine beta-lyase/cystathionine gamma-synthase K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43] D Clopa_0769 TIGR00299 family protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Clopa_3176 CoA-substrate-specific enzyme activase, putative K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Clopa_3229 plasma-membrane calcium-translocating P-type ATPase/golgi membrane calcium-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clopa_0932 P-type ATPase, translocating K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clopa_1995 cation transport ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clopa_2912 plasma-membrane calcium-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clopa_1172 P-type ATPase, translocating K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clopa_2044 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D Clopa_0928 P-type ATPase, translocating K12950 ctpC; manganese-transporting P-type ATPase C [EC:7.2.2.22] C 99981 Carbohydrate metabolism D Clopa_0116 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Clopa_1506 DNA-binding protein, stimulates sugar fermentation K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D Clopa_0518 ferredoxin K05337 fer; ferredoxin D Clopa_0263 ferredoxin K05337 fer; ferredoxin D Clopa_4671 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins D Clopa_2404 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Clopa_3710 hypothetical protein K15831 hycF; formate hydrogenlyase subunit 6 D Clopa_4178 hypothetical protein K02596 nifX; nitrogen fixation protein NifX D Clopa_4190 putative Fe-S oxidoreductase K02585 nifB; nitrogen fixation protein NifB D Clopa_3461 nitrogenase molybdenum-iron cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Clopa_4135 nitrogenase molybdenum-iron protein, alpha and beta chains K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Clopa_3470 nitrogenase molybdenum-iron protein, alpha and beta chains K22903 vnfE; nitrogenase vanadium-cofactor synthesis protein VnfE D Clopa_4199 polyferredoxin K02574 napH; ferredoxin-type protein NapH D Clopa_1421 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D Clopa_3639 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit D Clopa_3982 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Clopa_3249 lactoylglutathione lyase-like lyase K08234 yaeR; glyoxylase I family protein D Clopa_2888 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein D Clopa_1758 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Clopa_0442 putative protease of the Abi (CAAX) family K07027 K07027; glycosyltransferase 2 family protein D Clopa_4454 Cell Wall Hydrolase K01449 cwlJ; cell wall hydrolase D Clopa_4067 Cell Wall Hydrolase K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D Clopa_0069 putative unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein D Clopa_0989 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D Clopa_3734 Mg chelatase, cobalamin biosynthesis protein CobN K22390 ACP7; acid phosphatase type 7 B B 09192 Unclassified: genetic information processing C 99973 Transcription D Clopa_1403 glucitol operon activator K02466 gutM; glucitol operon activator protein D Clopa_4744 cold shock protein K03704 cspA; cold shock protein D Clopa_3888 cold shock protein K03704 cspA; cold shock protein D Clopa_2396 cold shock protein K03704 cspA; cold shock protein D Clopa_2494 cold shock protein K03704 cspA; cold shock protein D Clopa_0253 cold shock protein K03704 cspA; cold shock protein D Clopa_2808 phage antirepressor KilAC-like protein K07741 antB; anti-repressor protein D Clopa_3340 nitrogen regulatory protein PII K02589 nifHD1; nitrogen regulatory protein PII 1 D Clopa_3341 nitrogen regulatory protein PII K02590 nifHD2; nitrogen regulatory protein PII 2 D Clopa_4328 transcriptional accessory protein K06959 tex; protein Tex D Clopa_4432 hypothetical protein K09777 remA; extracellular matrix regulatory protein A D Clopa_2628 hypothetical protein K09777 remA; extracellular matrix regulatory protein A D Clopa_2444 hypothetical protein K09777 remA; extracellular matrix regulatory protein A D Clopa_0005 hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D Clopa_4577 putative RNA-binding protein with ribosomal protein S1 domain K07571 K07571; S1 RNA binding domain protein D Clopa_2987 putative exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Clopa_1604 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Clopa_4546 hypothetical protein K19411 mcsA; protein arginine kinase activator D Clopa_1635 trigger factor K03545 tig; trigger factor D Clopa_3629 SsrA-binding protein K03664 smpB; SsrA-binding protein D Clopa_0042 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC D Clopa_1986 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC D Clopa_1740 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC D Clopa_1989 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Clopa_1987 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Clopa_1741 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Clopa_1454 hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE D Clopa_1988 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Clopa_1742 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Clopa_2572 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D Clopa_1935 putative redox protein, regulator of disulfide bond formation K07397 yhfA; putative redox protein D Clopa_0397 xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor D Clopa_0430 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Clopa_3268 O-6-methylguanine DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Clopa_3450 putative double-stranded RNA/RNA-DNA hybrid binding protein K06993 K06993; ribonuclease H-related protein D Clopa_1750 DNA repair protein K03630 radC; DNA repair protein RadC D Clopa_2153 DNA repair protein radc K03630 radC; DNA repair protein RadC D Clopa_2573 TIGR00252 family protein K07460 yraN; putative endonuclease D Clopa_4406 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease D Clopa_2574 DNA protecting protein DprA K04096 smf; DNA processing protein D Clopa_2536 phage terminase, small subunit K07474 xtmA; phage terminase small subunit D Clopa_1892 phage terminase, large subunit, PBSX family K06909 xtmB; phage terminase large subunit D Clopa_2398 AAA ATPase K07478 ycaJ; putative ATPase D Clopa_0080 phage/plasmid primase, P4 family, C-terminal domain protein K06919 K06919; putative DNA primase/helicase D Clopa_4945 Transposase K07483 K07483; transposase D Clopa_4772 transposase K07483 K07483; transposase D Clopa_1813 transposase K07483 K07483; transposase D Clopa_2699 transposase K07483 K07483; transposase D Clopa_3138 Transposase K07483 K07483; transposase D Clopa_2768 transposase K07483 K07483; transposase D Clopa_0066 Transposase K07483 K07483; transposase D Clopa_1004 Transposase K07483 K07483; transposase D Clopa_0881 transposase K07491 rayT; REP-associated tyrosine transposase D Clopa_1084 transposase K07491 rayT; REP-associated tyrosine transposase D Clopa_4162 transposase K07493 K07493; putative transposase D Clopa_3432 transposase K07493 K07493; putative transposase D Clopa_3549 transposase K07493 K07493; putative transposase D Clopa_1240 transposase K07493 K07493; putative transposase D Clopa_1346 transposase K07493 K07493; putative transposase D Clopa_3809 transposase K07493 K07493; putative transposase D Clopa_1559 transposase K07493 K07493; putative transposase D Clopa_2137 transposase K07493 K07493; putative transposase D Clopa_0725 transposase K07493 K07493; putative transposase D Clopa_1085 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase D Clopa_0983 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase D Clopa_3191 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase D Clopa_0610 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase D Clopa_3882 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase D Clopa_0090 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase D Clopa_1812 transposase K07497 K07497; putative transposase D Clopa_3139 transposase K07497 K07497; putative transposase D Clopa_0067 transposase K07497 K07497; putative transposase D Clopa_1005 transposase K07497 K07497; putative transposase D Clopa_1675 site-specific recombinase XerD K14059 int; integrase C 99979 Viral proteins C 99998 Others D Clopa_0209 phage shock protein A (IM30), suppresses sigma54-dependent transcription K03969 pspA; phage shock protein A D Clopa_0104 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Clopa_4708 glycoside/pentoside/hexuronide transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Clopa_3981 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Clopa_3770 gamma-aminobutyrate permease-like transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Clopa_4474 phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D Clopa_3801 phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D Clopa_1052 NCS1 nucleoside transporter-like protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D Clopa_1486 CO dehydrogenase maturation factor K07321 cooC; CO dehydrogenase maturation factor D Clopa_2129 CO dehydrogenase maturation factor K07321 cooC; CO dehydrogenase maturation factor D Clopa_0107 pro-sigmaK processing inhibitor BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery D Clopa_0100 coat F domain-containing protein K06329 cotF; spore coat protein F D Clopa_4644 hypothetical protein K06333 cotJB; spore coat protein JB D Clopa_4645 Mn-containing catalase K06334 cotJC; spore coat protein JC D Clopa_4907 putative RNA-binding protein K06346 jag; spoIIIJ-associated protein D Clopa_0240 putative membrane protein required for spore maturation K06373 spmA; spore maturation protein A D Clopa_0241 putative membrane protein K06374 spmB; spore maturation protein B D Clopa_3019 anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Clopa_2723 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M D Clopa_2657 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D Clopa_2187 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D Clopa_0368 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D Clopa_2842 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D Clopa_2841 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB D Clopa_2840 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D Clopa_2839 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD D Clopa_2838 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE D Clopa_2837 stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF D Clopa_2836 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG D Clopa_2835 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH D Clopa_2441 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D Clopa_2497 site-specific recombinase, DNA invertase Pin K06400 spoIVCA; site-specific DNA recombinase D Clopa_0310 site-specific recombinase, DNA invertase Pin K06400 spoIVCA; site-specific DNA recombinase D Clopa_1163 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D Clopa_3016 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D Clopa_1164 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D Clopa_3015 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D Clopa_1165 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D Clopa_3013 hypothetical protein K06407 spoVAE; stage V sporulation protein AE D Clopa_3014 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D Clopa_4594 uncharacterized protein, involved in the regulation of septum location K06412 spoVG; stage V sporulation protein G D Clopa_4104 hypothetical protein K06415 spoVR; stage V sporulation protein R D Clopa_2606 hypothetical protein K06416 spoVS; stage V sporulation protein S D Clopa_4218 small, acid-soluble spore protein, alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clopa_4219 small, acid-soluble spore protein, alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clopa_2635 small, acid-soluble spore protein, alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clopa_1848 small, acid-soluble spore protein, alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clopa_2108 small, acid-soluble spore protein, alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clopa_1619 small, acid-soluble spore protein, alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clopa_0529 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor) D Clopa_0309 YabG peptidase U57 K06436 yabG; spore coat assemly protein D Clopa_2203 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein D Clopa_3505 spore germination protein, GerA family K06295 gerKA; spore germination protein KA D Clopa_1238 spore germination protein, GerA family K06295 gerKA; spore germination protein KA D Clopa_3506 germination protein, Ger(X)C family K06297 gerKC; spore germination protein KC D Clopa_0063 germination protein, Ger(X)C family K06297 gerKC; spore germination protein KC D Clopa_1239 germination protein, Ger(X)C family K06297 gerKC; spore germination protein KC D Clopa_0370 germination protein YpeB K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D Clopa_2413 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D Clopa_4118 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Clopa_1643 PhoH family protein K07175 phoH2; PhoH-like ATPase D Clopa_4106 putative Ser protein kinase K07180 prkA; serine protein kinase C 99992 Structural proteins D Clopa_3359 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme D Clopa_0594 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme D Clopa_3209 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme D Clopa_2562 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme D Clopa_0357 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme D Clopa_1917 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme D Clopa_2779 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme D Clopa_1598 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme D Clopa_4423 membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D Clopa_4816 membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D Clopa_1018 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein D Clopa_0293 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Clopa_4792 multidrug resistance efflux pump K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D Clopa_2437 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D Clopa_3539 ABC-type phosphonate transport system, ATPase component K05781 phnK; putative phosphonate transport system ATP-binding protein D Clopa_0391 hemerythrin-like metal-binding domain-containing protein K07216 hr; hemerythrin D Clopa_4244 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clopa_3466 DNA-binding protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein D Clopa_3475 DNA-binding protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein D Clopa_1057 DNA-binding protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein B B 09194 Poorly characterized C 99996 General function prediction only D Clopa_4452 putative periplasmic or secreted lipoprotein K04065 osmY; hyperosmotically inducible periplasmic protein D Clopa_2623 PHP family phosphohydrolase, histidinol phosphatase K04477 ycdX; putative hydrolase D Clopa_0476 X-X-X-Leu-X-X-Gly heptad repeat-containing protein K06994 K06994; putative drug exporter of the RND superfamily D Clopa_3325 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein D Clopa_3266 putative HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Clopa_4674 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D Clopa_4673 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D Clopa_3584 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D Clopa_4288 putative membrane-bound metal-dependent hydrolase (DUF457) K07038 K07038; inner membrane protein D Clopa_0996 putative membrane protein K07058 K07058; membrane protein D Clopa_3570 hypothetical protein K04750 phnB; PhnB protein D Clopa_1284 hypothetical protein K03744 lemA; LemA protein D Clopa_2123 putative membrane-associated protein K03975 dedA; membrane-associated protein D Clopa_0061 YhgE/Pip-like protein K01421 yhgE; putative membrane protein D Clopa_1021 YhgE/Pip-like protein K01421 yhgE; putative membrane protein D Clopa_1022 YhgE/Pip-like protein K01421 yhgE; putative membrane protein D Clopa_3824 putative membrane protein K08972 K08972; putative membrane protein D Clopa_1966 putative membrane protein (DUF2078) K08982 K08982; putative membrane protein C 99997 Function unknown D Clopa_4934 arylsulfatase regulator (Fe-S oxidoreductase) K06871 K06871; uncharacterized protein D Clopa_1712 radical SAM additional 4Fe4S-binding domain protein K06871 K06871; uncharacterized protein D Clopa_2327 six-Cys-in-45 modification radical SAM protein K06871 K06871; uncharacterized protein D Clopa_1010 arylsulfatase regulator (Fe-S oxidoreductase) K06871 K06871; uncharacterized protein D Clopa_4141 anaerobic sulfatase-maturating enzyme K06871 K06871; uncharacterized protein D Clopa_1285 beta-propeller domain-containing protein, methanol dehydrogenase K06872 K06872; uncharacterized protein D Clopa_4038 thioredoxin domain protein K06888 K06888; uncharacterized protein D Clopa_3676 prolyl oligopeptidase family protein K06889 K06889; uncharacterized protein D Clopa_0655 hypothetical protein K06893 K06893; uncharacterized protein D Clopa_1297 putative ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein D Clopa_4830 putative CoA-binding protein K06929 K06929; uncharacterized protein D Clopa_3332 putative DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein D Clopa_3811 putative Fe-S oxidoreductase K06940 K06940; uncharacterized protein D Clopa_1065 putative HD superfamily hydrolase K06950 K06950; uncharacterized protein D Clopa_3819 putative HD superfamily hydrolase K06950 K06950; uncharacterized protein D Clopa_0288 putative domain HDIG-containing protein K06950 K06950; uncharacterized protein D Clopa_2482 putative RNA-binding protein (contains KH domain) K06960 K06960; uncharacterized protein D Clopa_4533 putative RNA-binding protein containing a PIN domain K06962 K06962; uncharacterized protein D Clopa_2451 putative Zn-dependent protease K06973 K06973; uncharacterized protein D Clopa_2906 putative deacylase K06987 K06987; uncharacterized protein D Clopa_2907 putative deacylase K06987 K06987; uncharacterized protein D Clopa_4646 putative flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D Clopa_3708 pyridoxamine 5'-phosphate oxidase-related, FMN binding protein K07006 K07006; uncharacterized protein D Clopa_1106 putative membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein D Clopa_4418 putative exonuclease of the beta-lactamase fold involved in RNA processing K07041 K07041; uncharacterized protein D Clopa_0621 putative TIM-barrel fold metal-dependent hydrolase K07045 K07045; uncharacterized protein D Clopa_3705 putative TIM-barrel fold metal-dependent hydrolase K07045 K07045; uncharacterized protein D Clopa_1499 putative TIM-barrel fold metal-dependent hydrolase K07045 K07045; uncharacterized protein D Clopa_0469 nitroreductase-like oxidoreductase K07078 K07078; uncharacterized protein D Clopa_0768 putative oxidoreductase of aldo/keto reductase family K07079 K07079; uncharacterized protein D Clopa_2705 putative oxidoreductase of aldo/keto reductase family K07079 K07079; uncharacterized protein D Clopa_2707 putative oxidoreductase of aldo/keto reductase family K07079 K07079; uncharacterized protein D Clopa_2120 putative oxidoreductase of aldo/keto reductase family K07079 K07079; uncharacterized protein D Clopa_0783 putative permease K07090 K07090; uncharacterized protein D Clopa_0282 putative permease K07090 K07090; uncharacterized protein D Clopa_2032 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein D Clopa_1457 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein D Clopa_3885 putative phosphoesterase, ICC K07096 K07096; uncharacterized protein D Clopa_3271 putative phosphohydrolase K07098 K07098; uncharacterized protein D Clopa_0995 putative phosphohydrolase K07098 K07098; uncharacterized protein D Clopa_1234 putative phosphohydrolase K07099 K07099; uncharacterized protein D Clopa_0014 putative small molecule binding protein (contains 3H domain) K07105 K07105; uncharacterized protein D Clopa_1183 short-chain dehydrogenase of unknown substrate specificity K07124 K07124; uncharacterized protein D Clopa_1659 short-chain dehydrogenase of unknown substrate specificity K07124 K07124; uncharacterized protein D Clopa_2080 hypothetical protein K07129 K07129; uncharacterized protein D Clopa_4449 FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein D Clopa_4835 FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein D Clopa_0254 uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein D Clopa_4614 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein D Clopa_2220 Zn-ribbon protein, possibly nucleic acid-binding protein K07164 K07164; uncharacterized protein D Clopa_4909 hypothetical protein K08998 K08998; uncharacterized protein D Clopa_0499 hypothetical protein K09004 K09004; uncharacterized protein D Clopa_1964 hypothetical protein K09004 K09004; uncharacterized protein D Clopa_2201 hypothetical protein K09117 K09117; uncharacterized protein D Clopa_0015 hypothetical protein K09118 K09118; uncharacterized protein D Clopa_3264 hypothetical protein K09126 K09126; uncharacterized protein D Clopa_4117 hypothetical protein K09157 K09157; uncharacterized protein D Clopa_1311 hypothetical protein K09706 K09706; uncharacterized protein D Clopa_1942 hypothetical protein K09707 K09707; uncharacterized protein D Clopa_3508 hypothetical protein K09729 K09729; uncharacterized protein D Clopa_1336 hypothetical protein K09764 K09764; uncharacterized protein D Clopa_1440 hypothetical protein K09768 K09768; uncharacterized protein D Clopa_3228 hypothetical protein K09770 K09770; uncharacterized protein D Clopa_3890 hypothetical protein K09776 K09776; uncharacterized protein D Clopa_3423 hypothetical protein K09779 K09779; uncharacterized protein D Clopa_4105 sporulation protein YhbH K09786 K09786; uncharacterized protein D Clopa_2479 hypothetical protein K09787 K09787; uncharacterized protein D Clopa_4797 hypothetical protein K09807 K09807; uncharacterized protein D Clopa_2390 hypothetical protein K00243 K00243; uncharacterized protein D Clopa_2135 hypothetical protein K09861 K09861; uncharacterized protein D Clopa_3852 hypothetical protein K09975 K09975; uncharacterized protein D Clopa_1655 hypothetical protein K01163 K01163; uncharacterized protein D Clopa_3421 hypothetical protein K07502 yprB; uncharacterized protein D Clopa_2170 putative ribosomal protein K07584 ysxB; uncharacterized protein D Clopa_4475 phosphate transport regulator related to PhoU K07220 K07220; uncharacterized protein D Clopa_3800 phosphate transport regulator related to PhoU K07220 K07220; uncharacterized protein D Clopa_2590 putative nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024