+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Campylobacter peloridis

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D CPEL_1593 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C CPEL_0830 era; GTP-binding protein K03595 era; GTPase C CPEL_0186 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C CPEL_0214 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor C CPEL_0330 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA C CPEL_0495 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB C CPEL_0453 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D CPEL_0018 ksgA; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CPEL_1524 rsmE; 16S rRNA m3U1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CPEL_1235 gidB; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CPEL_1289 mraW; S-adenosyl-dependent methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CPEL_1522 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CPEL_0742 tlyA; ribosomal RNA large subunit methyltransferase, FtsJ family, putative hemolysin A protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D CPEL_1521 rRNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CPEL_0215 SPOUT methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CPEL_0020 rlmN; 23S rRNA m2A2503 methyltransferase, radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CPEL_0742 tlyA; ribosomal RNA large subunit methyltransferase, FtsJ family, putative hemolysin A protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CPEL_0016 rluB; 23S rRNA pseudouridine 2605 synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CPEL_0676 rluD; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CPEL_1101 rluA; 23S RNA-specific pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CPEL_0022 23S rRNA pseudouridine synthase, RluD family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C CPEL_1097 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM C CPEL_0272 radical SAM methylthiotransferase, MiaB/RimO family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C CPEL_1366 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C CPEL_1593 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C CPEL_1047 Holliday junction resolvase-like protein (UPF0081 domain) K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases B GTPases C CPEL_0830 era; GTP-binding protein K03595 era; GTPase C CPEL_0490 engA; GTP-binding protein K03977 engA; GTPase C CPEL_0186 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C CPEL_0684 spoT; ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C CPEL_0225 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C CPEL_0226 hypothetical protein (DUF150 domain) K09748 rimP; ribosome maturation factor RimP C CPEL_0429 iojap-like ribosome-associated protein (DUF143 domain) K09710 ybeB; ribosome-associated protein C CPEL_0798 metal-dependent hydrolase (UPF0054 domain) K07042 ybeY; probable rRNA maturation factor C CPEL_1141 sigma-54 modulation protein/ribosomal protein, S30EA family K05808 hpf; ribosome hibernation promoting factor C CPEL_0745 ychF; GTP-binding protein, putative GTP-dependent translation factor K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024