+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Cucurbita pepo subsp. pepo (vegetable marrow)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 111788570 mRNA cap guanine-N7 methyltransferase 1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 111801510 mRNA cap guanine-N7 methyltransferase 2 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 111803494 mRNA-capping enzyme-like isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 111779571 cyclin-dependent kinase D-3-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 111793919 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
D Cap binding complex
E 111780082 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 111793337 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 111795908 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 111798036 pre-mRNA cleavage factor Im 25 kDa subunit 1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111801218 pre-mRNA cleavage factor Im 25 kDa subunit 2-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111791459 pre-mRNA cleavage factor Im 25 kDa subunit 2 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111805064 pre-mRNA cleavage factor Im 25 kDa subunit 1-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111788596 uncharacterized protein LOC111788596 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 111796899 cleavage and polyadenylation specificity factor subunit 6-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 111797113 cleavage and polyadenylation specificity factor subunit 6-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 111795469 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 111782861 polyadenylation and cleavage factor homolog 4-like isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 111799917 uncharacterized protein LOC111799917 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 111790321 uncharacterized protein LOC111790321 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 111802440 polyadenylation and cleavage factor homolog 4-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 111784343 cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 111810088 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 111788148 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111802279 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111783399 30-kDa cleavage and polyadenylation specificity factor 30-like K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 111801957 30-kDa cleavage and polyadenylation specificity factor 30-like K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 111808573 uncharacterized protein LOC111808573 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 111807465 flowering time control protein FY-like isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 111808319 flowering time control protein FY-like isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 111782054 protein ANTHESIS POMOTING FACTOR 1 isoform X1 K14962 WDR82; COMPASS component SWD2
E 111791496 protein ANTHESIS POMOTING FACTOR 1 isoform X1 K14962 WDR82; COMPASS component SWD2
E 111808840 serine/threonine-protein phosphatase PP1 isozyme 4 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111798564 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111796255 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111800331 serine/threonine-protein phosphatase PP1-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111800216 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111790403 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111793594 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111804750 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111805727 serine/threonine-protein phosphatase PP1 isozyme 4-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111806059 serine/threonine-protein phosphatase PP1 isozyme 4-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111787843 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 111782518 cleavage stimulation factor subunit 50 isoform X1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 111808957 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 111809164 cleavage stimulating factor 64-like isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 111782062 cleavage stimulation factor subunit 77 K14408 CSTF3; cleavage stimulation factor subunit 3
E 111788650 symplekin isoform X1 K06100 SYMPK; symplekin
E 111803506 symplekin isoform X1 K06100 SYMPK; symplekin
E 111796877 symplekin-like isoform X1 K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 111781406 small nuclear ribonucleoprotein-associated protein B'-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 111804110 small nuclear ribonucleoprotein-associated protein B'-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 111786321 small nuclear ribonucleoprotein SmD3b-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 111796460 small nuclear ribonucleoprotein SmD3b-like isoform X1 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 111784400 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 111780137 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 111792255 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 111799164 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 111805833 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 111781083 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 111804297 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 111810088 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 111788148 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111802279 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111808957 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 111809164 cleavage stimulating factor 64-like isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 111788650 symplekin isoform X1 K06100 SYMPK; symplekin
E 111803506 symplekin isoform X1 K06100 SYMPK; symplekin
E 111796877 symplekin-like isoform X1 K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E 111787495 transcription elongation factor SPT4 homolog 2 K15171 SUPT4H1; transcription elongation factor SPT4
E 111792595 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
E 111808758 putative transcription elongation factor SPT5 homolog 1 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 111810602 N6-adenosine-methyltransferase MT-A70-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 111800888 N6-adenosine-methyltransferase MT-A70-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 111795478 methyltransferase-like protein 1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 111809959 methyltransferase-like protein 1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 111811582 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 111780290 FKBP12-interacting protein of 37 kDa K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 111793209 FKBP12-interacting protein of 37 kDa-like isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 111794890 uncharacterized protein LOC111794890 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111809105 uncharacterized protein LOC111809105 isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111800013 E3 ubiquitin-protein ligase Hakai-like K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
E 111790699 E3 ubiquitin-protein ligase Hakai-like K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 111778496 nuclear poly(A) polymerase 4-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111783006 nuclear poly(A) polymerase 1-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111801792 nuclear poly(A) polymerase 1-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111805703 nuclear poly(A) polymerase 4-like isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111806797 nuclear poly(A) polymerase 4-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E 111781192 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 111803452 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 111811558 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 111791126 zinc finger CCCH domain-containing protein 41-like K13192 RBM26; RNA-binding protein 26
E 111792224 zinc finger CCCH domain-containing protein 41-like K13192 RBM26; RNA-binding protein 26
E 111807830 uncharacterized protein LOC111807830 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 111779033 uncharacterized protein LOC111779033 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 111804096 uncharacterized protein LOC111804096 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 111781804 uncharacterized protein LOC111781804 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
C Other processing factors
D 111793876 KIN17-like protein K13102 KIN; DNA/RNA-binding protein KIN17
D 111791052 methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 111780022 serrate RNA effector molecule-like K27103 SRRT; serrate RNA effector molecule
D 111793418 serrate RNA effector molecule-like K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 111780252 RNA-binding protein Y14-like K12876 RBM8A; RNA-binding protein 8A
E 111792109 RNA-binding protein Y14-like K12876 RBM8A; RNA-binding protein 8A
E 111793994 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 111801140 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 111787440 THO complex subunit 4A-like isoform X1 K12881 THOC4; THO complex subunit 4
E 111785396 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 111783402 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 111794484 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 111790458 THO complex subunit 4D K12881 THOC4; THO complex subunit 4
E 111798845 DEAD-box ATP-dependent RNA helicase 56-like isoform X1 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 111805229 DEAD-box ATP-dependent RNA helicase 56 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 111789191 eukaryotic initiation factor 4A-3-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111791589 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111800498 histone deacetylase complex subunit SAP18-like K14324 SAP18; histone deacetylase complex subunit SAP18
E 111799582 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 111810379 pinin K13114 PNN; pinin
E 111794288 histone acetyltransferase KAT6A-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 111809860 histone acetyltransferase KAT6A-like isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 111789082 serine/arginine-rich splicing factor SR45-like isoform X1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 111797603 serine/arginine-rich splicing factor SR45-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 111784643 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
E 111788023 serine/arginine repetitive matrix protein 1-like K13171 SRRM1; serine/arginine repetitive matrix protein 1
E 111783279 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
E 111786788 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 111802273 THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 111809366 THO complex subunit 2-like isoform X1 K12879 THOC2; THO complex subunit 2
E 111808014 THO complex subunit 2-like isoform X1 K12879 THOC2; THO complex subunit 2
E 111800847 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 111787440 THO complex subunit 4A-like isoform X1 K12881 THOC4; THO complex subunit 4
E 111785396 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 111783402 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 111794484 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 111790458 THO complex subunit 4D K12881 THOC4; THO complex subunit 4
E 111788389 THO complex subunit 5B K13174 THOC5; THO complex subunit 5
E 111793546 THO complex subunit 6 K13175 THOC6; THO complex subunit 6
E 111777820 THO complex subunit 7A K13176 THOC7; THO complex subunit 7
E 111785427 THO complex subunit 7A-like K13176 THOC7; THO complex subunit 7
E 111794388 THO complex subunit 7A-like K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 111798352 enhanced ethylene response protein 5 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 111782564 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111798596 protein DSS1 HOMOLOG ON CHROMOSOME V-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111798356 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 111795851 SAC3 family protein C K23719 SAC3; nuclear mRNA export protein SAC3
E 111789662 SAC3 family protein B K23719 SAC3; nuclear mRNA export protein SAC3
D Nuclear pore complex
E 111776261 nuclear-pore anchor isoform X1 K09291 TPR; nucleoprotein TPR
E 111791654 protein RAE1-like K14298 RAE1; mRNA export factor
E 111779255 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 111807458 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 111791323 protein transport protein SEC13 homolog B K14004 SEC13; protein transport protein SEC13
E 111793606 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 111789653 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 111798458 nuclear pore complex protein NUP85 K14304 NUP85; nuclear pore complex protein Nup85
E 111798898 nuclear pore complex protein NUP43 K14305 NUP43; nuclear pore complex protein Nup43
E 111809414 uncharacterized protein LOC111809414 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 111779397 nuclear pore complex protein NUP54-like K14308 NUP54; nuclear pore complex protein Nup54
E 111802620 nuclear pore complex protein NUP54 K14308 NUP54; nuclear pore complex protein Nup54
E 111806832 nuclear pore complex protein NUP62 K14306 NUP62; nuclear pore complex protein Nup62
E 111782181 nuclear pore complex protein NUP88-like K14318 NUP88; nuclear pore complex protein Nup88
E 111796637 nuclear pore complex protein NUP88-like K14318 NUP88; nuclear pore complex protein Nup88
E 111790702 nuclear pore complex protein NUP93A-like isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 111777216 nuclear pore complex protein NUP98A-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 111795262 nuclear pore complex protein NUP96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 111795952 nuclear pore complex protein NUP98A-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 111807700 nuclear pore complex protein NUP107 K14301 NUP107; nuclear pore complex protein Nup107
E 111811633 nuclear pore complex protein NUP133 K14300 NUP133; nuclear pore complex protein Nup133
E 111795266 uncharacterized protein LOC111795266 K14311 NUP188; nuclear pore complex protein Nup188
E 111795889 nuclear pore complex protein NUP155 K14312 NUP155; nuclear pore complex protein Nup155
E 111808406 nuclear pore complex protein NUP160 K14303 NUP160; nuclear pore complex protein Nup160
E 111785634 nuclear pore complex protein NUP35-like K14313 NUP35; nuclear pore complex protein Nup53
E 111785700 nuclear pore complex protein NUP35-like K14313 NUP35; nuclear pore complex protein Nup53
E 111806457 nuclear pore complex protein NUP35-like K14313 NUP35; nuclear pore complex protein Nup53
E 111798582 nuclear pore complex protein NUP205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 111791759 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 K14314 NUP210; nuclear pore complex protein Nup210
E 111801709 nuclear pore complex protein NUP214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 111782033 nuclear pore complex protein NUP58-like K14307 NUPL1; nucleoporin p58/p45
E 111803197 nuclear pore complex protein NUP58-like isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 111784074 zinc finger CCCH domain-containing protein 16 K14321 NUPL2; nucleoporin-like protein 2
E 111781279 uncharacterized protein LOC111781279 isoform X1 K14315 NDC1; nucleoporin NDC1
E 111803454 uncharacterized protein LOC111803454 K14315 NDC1; nucleoporin NDC1
E 111805996 protein SEH1 K14299 SEH1; nucleoporin SEH1
E 111790587 aladin isoform X1 K14320 AAAS; aladin
E 111804139 protein GLE1 isoform X1 K18723 GLE1; nucleoporin GLE1
D Ran-mediated transport factors
E 111780680 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111780681 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111780682 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111805613 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111793890 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111793892 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 111799117 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 111782772 plant UBX domain-containing protein 10-like K18726 FAF2; FAS-associated factor 2
E 111783952 plant UBX domain-containing protein 10 K18726 FAF2; FAS-associated factor 2
E 111795983 plant UBX domain-containing protein 10-like K18726 FAF2; FAS-associated factor 2
E 111781393 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 111792631 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 111799636 cell division control protein 48 homolog D-like K13525 VCP; transitional endoplasmic reticulum ATPase
E 111790762 cell division control protein 48 homolog E K13525 VCP; transitional endoplasmic reticulum ATPase
E 111803648 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 111777445 protein N-lysine methyltransferase METTL21A K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 111795939 protein-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 111796618 protein EXPORTIN 1A isoform X1 K14290 XPO1; exportin-1
E 111810881 protein EXPORTIN 1A-like K14290 XPO1; exportin-1
E 111798322 exportin-7-like isoform X1 K18460 XPO7; exportin-7
E 111805250 exportin-7-like isoform X1 K18460 XPO7; exportin-7
E 111778966 RAN GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
E 111799940 RAN GTPase-activating protein 2-like K14319 RANGAP1; Ran GTPase-activating protein 1
E 111789639 RAN GTPase-activating protein 2-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 111782882 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 111779016 eukaryotic translation initiation factor-like K03259 EIF4E; translation initiation factor 4E
E 111806761 eukaryotic translation initiation factor-like K03259 EIF4E; translation initiation factor 4E
E 111789644 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E
E 111801670 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 111778169 eukaryotic initiation factor 4A-11 K03257 EIF4A; translation initiation factor 4A
E 111805660 eukaryotic initiation factor 4A-15-like K03257 EIF4A; translation initiation factor 4A
E 111790922 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A
E 111789329 eukaryotic initiation factor 4A-8-like K03257 EIF4A; translation initiation factor 4A
E 111807209 eukaryotic initiation factor 4A-11-like K03257 EIF4A; translation initiation factor 4A
E 111788113 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111784601 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111779210 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111779859 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G
E 111799683 eukaryotic translation initiation factor 4G-like K03260 EIF4G; translation initiation factor 4G
E 111796946 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111806642 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111793753 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 111779891 protein PIR isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 111776881 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111795479 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111778104 uncharacterized protein LOC111778104 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111788579 uncharacterized protein LOC111788579 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111778792 31 kDa ribonucleoprotein, chloroplastic-like K13126 PABPC; polyadenylate-binding protein
E 111778178 30S ribosomal protein 2, chloroplastic-like K13126 PABPC; polyadenylate-binding protein
E 111807001 30S ribosomal protein 2, chloroplastic-like K13126 PABPC; polyadenylate-binding protein
E 111793012 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 111809979 polyadenylate-binding protein 8-like K13126 PABPC; polyadenylate-binding protein
E 111790907 LOW QUALITY PROTEIN: polyadenylate-binding protein 7-like K13126 PABPC; polyadenylate-binding protein
E 111811258 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 111797237 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 111809005 polyadenylate-binding protein 3 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 111808111 polyadenylate-binding protein 3-like K13126 PABPC; polyadenylate-binding protein
E 111788753 DExH-box ATP-dependent RNA helicase DExH11 isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 111779967 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence
E 111793938 translation machinery-associated protein 22-like K24272 DENR; density-regulated protein
E 111780060 translation machinery-associated protein 22-like K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E 111792321 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago
E 111811430 partner of Y14 and mago-like isoform X1 K14294 WIBG; partner of Y14 and mago
E 111788872 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111785439 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111785440 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111779021 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111780026 glycine-rich RNA-binding protein 3, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111788538 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111776714 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111793271 glycine-rich RNA-binding protein 2, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111792988 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111795236 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111797417 RNA-binding protein 3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111789831 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111809859 UBP1-associated protein 2B-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111810865 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111799147 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111797065 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111805812 UBP1-associated protein 2B-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111801579 glycine-rich RNA-binding protein 4, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111778445 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111788276 RNA-binding protein 1-like K14411 MSI; RNA-binding protein Musashi
E 111784420 heterogeneous nuclear ribonucleoprotein 1-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111783698 heterogeneous nuclear ribonucleoprotein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111777862 heterogeneous nuclear ribonucleoprotein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111796034 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111802088 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111810793 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111794822 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111795806 RNA-binding protein Musashi homolog 2-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111806871 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111811559 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 111797024 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 111806020 protein PELOTA 1 isoform X1 K06965 PELO; protein pelota
E 111781876 polyadenylate-binding protein 3-like K14396 PABPN1; polyadenylate-binding protein 2
E 111786689 polyadenylate-binding protein 3-like K14396 PABPN1; polyadenylate-binding protein 2
E 111780102 polyadenylate-binding protein 1-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 111809971 polyadenylate-binding protein 2-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 111809633 polyadenylate-binding protein 1-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 111810737 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 111801435 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 111790904 DEAD-box ATP-dependent RNA helicase 38 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 111803503 pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 111781377 protein MODIFIER OF SNC1 11-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 111803550 protein MODIFIER OF SNC1 11-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 111790562 protein MODIFIER OF SNC1 11-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 111780198 transcription factor Pur-alpha 1-like K21772 PURA; transcriptional activator protein Pur-alpha
E 111793823 transcription factor Pur-alpha 1-like K21772 PURA; transcriptional activator protein Pur-alpha
E 111780130 zinc finger CCCH domain-containing protein 34-like isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 111793472 zinc finger CCCH domain-containing protein 32-like isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 111791333 SAC3 family protein A-like K23802 LENG8; SAC3 family protein LENG8/THP3
E 111795974 SAC3 family protein A-like isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 111778600 eukaryotic peptide chain release factor subunit 1-3-like K03265 ETF1; peptide chain release factor subunit 1
E 111806968 eukaryotic peptide chain release factor subunit 1-3 K03265 ETF1; peptide chain release factor subunit 1
E 111783083 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 111801903 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3
E 111784697 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111810634 regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111808513 regulator of nonsense transcripts UPF2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111792008 regulator of nonsense transcripts UPF2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111788032 regulator of nonsense transcripts UPF3-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 111796968 regulator of nonsense transcripts UPF3-like K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 111785388 serine/threonine-protein phosphatase PP2A-2 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111778314 serine/threonine-protein phosphatase PP2A catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111781266 serine/threonine-protein phosphatase PP2A-4 catalytic subunit isoform X1 K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111777387 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111795481 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111803421 serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111798606 serine/threonine-protein phosphatase PP2A-2 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111805280 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111797979 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 111802290 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 111788843 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111778385 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111806845 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111793695 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111791053 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111798548 serine/threonine protein phosphatase 2A regulatory subunit B''beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111806825 probable serine/threonine protein phosphatase 2A regulatory subunit B''delta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111805374 serine/threonine protein phosphatase 2A regulatory subunit B''beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111800323 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111781554 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111785449 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111798834 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111800012 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111805155 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111798906 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111798919 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111795194 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111805603 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111798666 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111805662 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111808985 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111803868 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 111777809 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 111780074 protein SMG7-like isoform X1 K14409 SMG7; protein SMG7
E 111793983 protein SMG7-like K14409 SMG7; protein SMG7
E 111777873 protein smg8-like isoform X1 K18734 SMG8; protein SMG8
E 111795761 uncharacterized protein LOC111795761 K18734 SMG8; protein SMG8
E 111801051 protein SMG9-like K18735 SMG9; protein SMG9
E 111778104 uncharacterized protein LOC111778104 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111788579 uncharacterized protein LOC111788579 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
C Factors involved in mRNA localization
D Cargo complex
E 111779177 pumilio homolog 24 K14844 PUF6; pumilio homology domain family member 6
E 111780287 myosin-17-like K10357 MYO5; myosin V
E 111778431 myosin-12-like isoform X1 K10357 MYO5; myosin V
E 111778121 myosin-6-like K10357 MYO5; myosin V
E 111788698 myosin-2-like K10357 MYO5; myosin V
E 111804849 myosin-11-like isoform X1 K10357 MYO5; myosin V
E 111792608 myosin-17-like K10357 MYO5; myosin V
E 111806002 myosin-15 K10357 MYO5; myosin V
E 111796588 myosin-2-like K10357 MYO5; myosin V
E 111807183 myosin-11-like K10357 MYO5; myosin V
E 111807572 myosin-12 isoform X1 K10357 MYO5; myosin V
E 111806791 myosin-6-like K10357 MYO5; myosin V
E 111808417 myosin-9 isoform X1 K10357 MYO5; myosin V
E 111800250 myosin-7-like isoform X1 K10357 MYO5; myosin V
E 111798068 myosin-11 isoform X1 K10357 MYO5; myosin V
E 111799013 piRNA biogenesis protein EXD1-like isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 111805057 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
D Trans-acting binding proteins
E 111788580 far upstream element-binding protein 2-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 111805635 far upstream element-binding protein 1 K13210 FUBP; far upstream element-binding protein
E 111796794 far upstream element-binding protein 1-like K13210 FUBP; far upstream element-binding protein
E 111811591 far upstream element-binding protein 1-like K13210 FUBP; far upstream element-binding protein
E 111792741 far upstream element-binding protein 1-like K13210 FUBP; far upstream element-binding protein
E 111798092 far upstream element-binding protein 1-like K13210 FUBP; far upstream element-binding protein
E 111778365 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111776822 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 111806755 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111809280 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111809281 elongation factor 1-alpha-like isoform X1 K03231 EEF1A; elongation factor 1-alpha
E 111794446 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 111784613 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 111793031 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 111810181 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 111802567 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 111790925 probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
D Other mRNA localization factors
E 111779891 protein PIR isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 111781345 KH domain-containing protein At4g18375-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111778620 poly(rC)-binding protein 4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111803996 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111808476 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111798917 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111793968 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111806543 KH domain-containing protein HEN4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111807563 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111797293 KH domain-containing protein HEN4-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111799151 RNA-binding KH domain-containing protein PEPPER-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111805844 RNA-binding KH domain-containing protein PEPPER-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111805744 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111803789 KH domain-containing protein At4g18375-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111811608 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111810246 RNA-binding KH domain-containing protein RCF3-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 111801659 RNA-binding KH domain-containing protein RCF3-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 111782778 protein argonaute 1-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111787923 protein argonaute 1-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111777208 protein argonaute 4-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111782854 protein argonaute 5 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111793981 protein argonaute 16-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111795214 protein argonaute 4-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111809928 protein argonaute 7-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111790468 protein argonaute 10-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111801935 protein argonaute 7-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111794084 protein argonaute PNH1-like isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111799933 protein argonaute 10-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111811207 LOW QUALITY PROTEIN: protein argonaute 16-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111782882 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 111779016 eukaryotic translation initiation factor-like K03259 EIF4E; translation initiation factor 4E
E 111806761 eukaryotic translation initiation factor-like K03259 EIF4E; translation initiation factor 4E
E 111789644 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E
E 111801670 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 111784697 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111810634 regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111776881 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111795479 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111790150 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111800249 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111787981 protein decapping 5-like isoform X1 K18749 LSM14; protein LSM14
E 111797598 protein decapping 5-like K18749 LSM14; protein LSM14
E 111808837 protein decapping 5-like K18749 LSM14; protein LSM14
E 111801841 protein decapping 5-like K18749 LSM14; protein LSM14
E 111805478 protein decapping 5-like K18749 LSM14; protein LSM14
E 111811383 protein decapping 5-like isoform X1 K18749 LSM14; protein LSM14
E 111778780 probable RNA helicase SDE3 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111808228 probable RNA helicase SDE3 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111809236 probable RNA helicase SDE3 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111777388 transportin-1-like K18752 TNPO1; transportin-1
E 111795193 transportin-1-like K18752 TNPO1; transportin-1
E 111777809 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 111780074 protein SMG7-like isoform X1 K14409 SMG7; protein SMG7
E 111793983 protein SMG7-like K14409 SMG7; protein SMG7
E 111809160 zinc finger CCCH domain-containing protein 15-like isoform X1 K18753 ZFP36L; butyrate response factor
E 111797287 uncharacterized protein LOC111797287 isoform X1 K18753 ZFP36L; butyrate response factor
E 111810274 zinc finger CCCH domain-containing protein 14-like K18753 ZFP36L; butyrate response factor
E 111788872 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111785439 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111785440 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111779021 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111780026 glycine-rich RNA-binding protein 3, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111788538 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111776714 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111793271 glycine-rich RNA-binding protein 2, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111792988 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111795236 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111797417 RNA-binding protein 3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111789831 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111809859 UBP1-associated protein 2B-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111810865 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111799147 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111797065 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111805812 UBP1-associated protein 2B-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111801579 glycine-rich RNA-binding protein 4, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111785673 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 111788926 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 111781262 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 111786718 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 111785762 la-related protein 1A-like K18757 LARP1; la-related protein 1
E 111777382 la-related protein 1A-like isoform X1 K18757 LARP1; la-related protein 1
E 111803944 la-related protein 1C-like isoform X1 K18757 LARP1; la-related protein 1
E 111803464 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 111795013 la-related protein 1A-like K18757 LARP1; la-related protein 1
D P-body specific factors
E 111787481 mRNA-decapping enzyme subunit 2-like isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111801024 mRNA-decapping enzyme subunit 2-like isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111781781 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111803237 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111779302 sm-like protein LSM1B isoform X1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111806449 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111790382 sm-like protein LSM1B isoform X1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111795197 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111811200 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111806813 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111809241 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111787556 sm-like protein LSM4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111797034 sm-like protein LSM4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111794701 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111811380 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111778180 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111800438 uncharacterized protein LOC111800438 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111789260 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111790011 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111801466 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 111780287 myosin-17-like K10357 MYO5; myosin V
E 111778431 myosin-12-like isoform X1 K10357 MYO5; myosin V
E 111778121 myosin-6-like K10357 MYO5; myosin V
E 111788698 myosin-2-like K10357 MYO5; myosin V
E 111804849 myosin-11-like isoform X1 K10357 MYO5; myosin V
E 111792608 myosin-17-like K10357 MYO5; myosin V
E 111806002 myosin-15 K10357 MYO5; myosin V
E 111796588 myosin-2-like K10357 MYO5; myosin V
E 111807183 myosin-11-like K10357 MYO5; myosin V
E 111807572 myosin-12 isoform X1 K10357 MYO5; myosin V
E 111806791 myosin-6-like K10357 MYO5; myosin V
E 111808417 myosin-9 isoform X1 K10357 MYO5; myosin V
E 111800250 myosin-7-like isoform X1 K10357 MYO5; myosin V
E 111798068 myosin-11 isoform X1 K10357 MYO5; myosin V
E 111777377 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 111781669 tubulin alpha chain isoform X1 K07374 TUBA; tubulin alpha
E 111793030 tubulin alpha-4 chain K07374 TUBA; tubulin alpha
E 111809983 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 111794469 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 111811277 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 111803282 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 111789643 tubulin alpha-3 chain-like K07374 TUBA; tubulin alpha
E 111800289 tubulin alpha-3 chain-like K07374 TUBA; tubulin alpha
E 111786720 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111799741 CCR4-NOT transcription complex subunit 1-like isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111790227 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111776803 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111795054 probable NOT transcription complex subunit VIP2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111794490 probable NOT transcription complex subunit VIP2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111794416 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111794417 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111801027 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111790094 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111776791 uncharacterized protein LOC111776791 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111794396 uncharacterized protein LOC111794396 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111797698 carbon catabolite repressor protein 4 homolog 4 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111790776 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111804487 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111800379 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111776329 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111776331 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111798873 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111795144 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111795145 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111808636 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111795826 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111795886 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111805029 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111805030 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111799079 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111801330 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111780222 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 111808491 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 111785359 uncharacterized protein LOC111785359 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111787912 uncharacterized protein LOC111787912 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111810394 uncharacterized protein LOC111810394 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111797027 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111789550 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111810752 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 111808513 regulator of nonsense transcripts UPF2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111792008 regulator of nonsense transcripts UPF2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111788032 regulator of nonsense transcripts UPF3-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 111796968 regulator of nonsense transcripts UPF3-like K14328 UPF3; regulator of nonsense transcripts 3
E 111789141 DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 111809014 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 111792654 DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 111784068 uncharacterized protein LOC111784068 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 111780169 uncharacterized protein LOC111780169 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 111806856 uncharacterized protein LOC111806856 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 111779050 oligouridylate-binding protein 1B-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 111807702 oligouridylate-binding protein 1B-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 111805429 oligouridylate-binding protein 1-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 111790356 oligouridylate-binding protein 1B-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 111799167 oligouridylate-binding protein 1-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 111778792 31 kDa ribonucleoprotein, chloroplastic-like K13126 PABPC; polyadenylate-binding protein
E 111778178 30S ribosomal protein 2, chloroplastic-like K13126 PABPC; polyadenylate-binding protein
E 111807001 30S ribosomal protein 2, chloroplastic-like K13126 PABPC; polyadenylate-binding protein
E 111793012 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 111809979 polyadenylate-binding protein 8-like K13126 PABPC; polyadenylate-binding protein
E 111790907 LOW QUALITY PROTEIN: polyadenylate-binding protein 7-like K13126 PABPC; polyadenylate-binding protein
E 111811258 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 111797237 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 111809005 polyadenylate-binding protein 3 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 111808111 polyadenylate-binding protein 3-like K13126 PABPC; polyadenylate-binding protein
E 111780113 ras GTPase-activating protein-binding protein 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 111793549 ras GTPase-activating protein-binding protein 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 111791257 eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A
E 111793305 eukaryotic translation initiation factor 3 subunit B-like isoform X1 K03253 EIF3B; translation initiation factor 3 subunit B
E 111797089 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 111778169 eukaryotic initiation factor 4A-11 K03257 EIF4A; translation initiation factor 4A
E 111805660 eukaryotic initiation factor 4A-15-like K03257 EIF4A; translation initiation factor 4A
E 111790922 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A
E 111789329 eukaryotic initiation factor 4A-8-like K03257 EIF4A; translation initiation factor 4A
E 111807209 eukaryotic initiation factor 4A-11-like K03257 EIF4A; translation initiation factor 4A
E 111789191 eukaryotic initiation factor 4A-3-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111791589 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111788113 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111784601 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111779210 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111779859 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G
E 111799683 eukaryotic translation initiation factor 4G-like K03260 EIF4G; translation initiation factor 4G
E 111796946 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111806642 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 111793753 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 111779573 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 111793410 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 111780703 tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 111781781 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111803237 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111787481 mRNA-decapping enzyme subunit 2-like isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111801024 mRNA-decapping enzyme subunit 2-like isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111790150 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111800249 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111810752 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 111785359 uncharacterized protein LOC111785359 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111787912 uncharacterized protein LOC111787912 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111810394 uncharacterized protein LOC111810394 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111797027 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111789550 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 111779302 sm-like protein LSM1B isoform X1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111806449 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111790382 sm-like protein LSM1B isoform X1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111795197 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111811200 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111806813 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111809241 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111787556 sm-like protein LSM4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111797034 sm-like protein LSM4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111794701 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111811380 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111778180 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111800438 uncharacterized protein LOC111800438 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111789260 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111790011 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111801466 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 111798477 5'-3' exoribonuclease 3 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 111804820 5'-3' exoribonuclease 4 K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-]
D Other 5'-3' decay factors
C 3'-5' decay
D Core exosome factors
E 111793261 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 111795353 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 111811443 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 111779834 putative exosome complex component rrp40 K03681 RRP40; exosome complex component RRP40
E 111793693 putative exosome complex component rrp40 K03681 RRP40; exosome complex component RRP40
E 111778292 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 111798976 exosome complex exonuclease RRP46 homolog K12590 RRP46; exosome complex component RRP46
E 111777491 exosome complex component RRP41-like isoform X1 K12587 MTR3; exosome complex component MTR3
E 111796028 exosome complex component RRP41-like isoform X1 K12587 MTR3; exosome complex component MTR3
E 111792238 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 111803880 exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 111786727 exosome complex component RRP45B-like K03678 RRP45; exosome complex component RRP45
E 111780656 exosome complex component RRP45A-like isoform X1 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 111792736 exosome complex exonuclease RRP44 homolog A-like K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 111811598 exosome complex exonuclease RRP44 homolog A-like K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 111781329 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 111804160 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 111788289 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1
E 111796525 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1
E 111776852 uncharacterized protein LOC111776852 isoform X1 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 111794500 uncharacterized protein LOC111794500 isoform X1 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 111796614 non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 111778667 DExH-box ATP-dependent RNA helicase DExH9-like isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E 111805403 DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E 111807085 DExH-box ATP-dependent RNA helicase DExH9-like K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 111788753 DExH-box ATP-dependent RNA helicase DExH11 isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 111784741 tetratricopeptide repeat protein SKI3 K12600 SKI3; superkiller protein 3
E 111779917 WD repeat-containing protein VIP3 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 111797698 carbon catabolite repressor protein 4 homolog 4 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111790776 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111804487 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111800379 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111786720 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111799741 CCR4-NOT transcription complex subunit 1-like isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111790227 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111776803 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111795054 probable NOT transcription complex subunit VIP2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111794490 probable NOT transcription complex subunit VIP2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111794416 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111794417 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111801027 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111790094 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111776791 uncharacterized protein LOC111776791 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111794396 uncharacterized protein LOC111794396 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111776329 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111776331 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111798873 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111795144 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111795145 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111808636 putative CCR4-associated factor 1 homolog 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111795826 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111795886 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111805029 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111805030 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111799079 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111801330 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111811745 CCR4-NOT transcription complex subunit 9-like isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 111789276 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 111797056 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 111780161 CCR4-NOT transcription complex subunit 10-like K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E 111792818 CCR4-NOT transcription complex subunit 10-like isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E 111780555 ABC transporter I family member 20 K12608 CAF16; CCR4-NOT complex subunit CAF16
E 111807585 ABC transporter I family member 19-like K12608 CAF16; CCR4-NOT complex subunit CAF16
D Pan complex
D Other 3'-5' decay factors
E 111806690 poly(A)-specific ribonuclease PARN-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111810771 poly(A)-specific ribonuclease PARN isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111804992 uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111779849 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111777360 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111793843 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111790766 DExH-box ATP-dependent RNA helicase DExH1 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111803135 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111801315 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111810930 DExH-box ATP-dependent RNA helicase DExH6-like isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111798656 3'-5' exoribonuclease 1-like isoform X1 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 111805389 uncharacterized protein LOC111805389 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 111782758 protein NRDE2 homolog isoform X1 K26109 NRDE2; nuclear exosome regulator NRDE2
E 111792223 protein RST1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 111795149 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
E 111782167 uncharacterized protein LOC111782167 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Other RNA degradosome components
E 111781810 enolase 1-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111793952 enolase 1, chloroplastic K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111803558 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111810204 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111789315 cytosolic enolase 3 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111791737 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 111793458 polyribonucleotide nucleotidyltransferase 2, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 111780677 ATP-dependent 6-phosphofructokinase 4, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111788689 ATP-dependent 6-phosphofructokinase 3-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111779813 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111780304 ATP-dependent 6-phosphofructokinase 3-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111793951 ATP-dependent 6-phosphofructokinase 7-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111804266 ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 111809801 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 111779883 heat shock 70 kDa protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 111810872 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 111778186 chaperonin CPN60-2, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111778929 chaperonin CPN60-2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111779776 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111807400 chaperonin CPN60-1, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111792990 ruBisCO large subunit-binding protein subunit beta, chloroplastic K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111801417 chaperonin 60 subunit beta 4, chloroplastic-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 111806851 chaperonin CPN60-like 2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 111795353 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 111811443 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 111793261 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 111778292 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 111792238 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024