+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium phocae
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cpho00010]
D CPHO_04325 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_04130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_08910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CPHO_07330 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CPHO_08050 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CPHO_10990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CPHO_05820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CPHO_05810 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CPHO_08610 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CPHO_05815 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CPHO_01595 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CPHO_08175 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CPHO_04530 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CPHO_03765 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CPHO_04045 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_10905 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CPHO_08205 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CPHO_11070 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CPHO_06835 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CPHO_11565 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CPHO_02715 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CPHO_05265 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CPHO_11365 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CPHO_02190 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_02180 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:cpho00020]
D CPHO_09180 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CPHO_09805 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CPHO_05950 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CPHO_09895 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CPHO_07795 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_02535 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CPHO_01340 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CPHO_01345 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CPHO_01335 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CPHO_08055 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CPHO_03200 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CPHO_04865 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CPHO_09800 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CPHO_11365 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CPHO_03765 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CPHO_04045 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cpho00030]
D CPHO_08910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CPHO_05840 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CPHO_05830 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CPHO_06210 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CPHO_05760 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CPHO_05850 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CPHO_05845 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CPHO_03155 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CPHO_01970 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CPHO_12105 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CPHO_02715 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CPHO_08585 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CPHO_02650 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CPHO_10990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CPHO_08050 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CPHO_07330 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cpho00040]
D CPHO_11190 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CPHO_08765 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CPHO_02665 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D CPHO_02660 hypothetical protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CPHO_02655 ribulose 5-phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CPHO_05760 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:cpho00051]
D CPHO_09585 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CPHO_09605 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CPHO_01965 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CPHO_09625 GDP-mannose pyrophosphorylase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CPHO_07330 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CPHO_08050 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CPHO_05140 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CPHO_10990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CPHO_05820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CPHO_03155 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cpho00052]
D CPHO_11565 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CPHO_11545 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CPHO_03815 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CPHO_11550 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CPHO_05215 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CPHO_08765 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CPHO_02715 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CPHO_04325 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_04130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_11590 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CPHO_07330 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CPHO_07840 beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:cpho00053]
D CPHO_11190 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CPHO_02665 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D CPHO_02660 hypothetical protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CPHO_02655 ribulose 5-phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:cpho00500]
D CPHO_07840 beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CPHO_08765 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CPHO_07830 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CPHO_07455 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CPHO_04535 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CPHO_10610 hypothetical protein K01200 pulA; pullulanase [EC:3.2.1.41]
D CPHO_09755 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D CPHO_03465 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CPHO_07450 alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D CPHO_07835 glycosyl transferase family 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CPHO_02190 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_02180 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_04445 malto-oligosyltrehalose synthase K01214 ISA; isoamylase [EC:3.2.1.68]
D CPHO_02245 trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CPHO_02235 trehalose phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CPHO_02715 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CPHO_04325 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_04130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_08910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpho00520]
D CPHO_11320 beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CPHO_02190 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_02180 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_04315 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CPHO_04310 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CPHO_10190 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CPHO_10215 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CPHO_08580 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CPHO_02640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CPHO_01385 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CPHO_04330 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D CPHO_03595 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CPHO_03695 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CPHO_04325 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_04130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_05265 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CPHO_02715 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CPHO_08765 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CPHO_11190 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CPHO_11545 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CPHO_03815 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CPHO_11550 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CPHO_05215 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CPHO_11590 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CPHO_08910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CPHO_09585 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CPHO_09605 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CPHO_01965 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CPHO_09625 GDP-mannose pyrophosphorylase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CPHO_07830 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cpho00620]
D CPHO_06835 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CPHO_03765 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CPHO_04045 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_08205 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CPHO_10910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CPHO_10915 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CPHO_04530 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CPHO_09795 acetyl-COA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D CPHO_04595 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CPHO_11070 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CPHO_02535 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CPHO_10905 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CPHO_02315 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CPHO_06170 RNA helicase K18930 dld; D-lactate dehydrogenase
D CPHO_05510 hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CPHO_09800 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CPHO_03200 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CPHO_04865 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CPHO_08055 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CPHO_09935 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CPHO_11365 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_01015 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpho00630]
D CPHO_06835 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CPHO_03200 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CPHO_09180 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CPHO_09805 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CPHO_05950 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_09795 acetyl-COA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D CPHO_09765 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CPHO_09760 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CPHO_09770 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CPHO_01050 catalase K03781 katE; catalase [EC:1.11.1.6]
D CPHO_03840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_03985 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_08110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CPHO_04035 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CPHO_04030 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_04025 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CPHO_04550 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CPHO_07795 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CPHO_07980 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CPHO_07985 dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CPHO_07975 ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit
C 00640 Propanoate metabolism [PATH:cpho00640]
D CPHO_06835 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CPHO_10910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CPHO_10915 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_09795 acetyl-COA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D CPHO_09765 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CPHO_09760 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CPHO_09770 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CPHO_06865 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CPHO_09805 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CPHO_09815 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D CPHO_09810 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D CPHO_10905 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cpho00650]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_12250 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_12245 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_01340 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CPHO_01345 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CPHO_01335 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CPHO_09710 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CPHO_12150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CPHO_02535 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CPHO_07265 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CPHO_07260 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CPHO_00555 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:cpho00660]
D CPHO_07265 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CPHO_07260 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CPHO_00555 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CPHO_06660 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CPHO_06655 isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CPHO_06950 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cpho00562]
D CPHO_04500 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CPHO_05270 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CPHO_05400 phosphatidylglycerophosphate synthase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D CPHO_06865 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CPHO_05820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cpho00190]
D CPHO_06180 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CPHO_01340 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CPHO_01345 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CPHO_01335 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CPHO_04105 menaquinol-cytochrome C reductase K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CPHO_04110 menaquinol-cytochrome C reductase K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D CPHO_04100 cytochrome C K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D CPHO_05855 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CPHO_04090 cytochrome C oxidase K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CPHO_04095 cytochrome B K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CPHO_02770 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CPHO_04085 cytochrome B K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CPHO_05865 cytochrome B561 K02259 COX15; heme a synthase [EC:1.17.99.9]
D CPHO_07505 ATP synthase F0F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CPHO_07495 ATP F0F1 synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CPHO_07500 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CPHO_07510 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CPHO_07490 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CPHO_07525 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CPHO_07515 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CPHO_07520 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CPHO_10740 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CPHO_08605 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CPHO_10760 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cpho00710]
D CPHO_05815 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CPHO_05810 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CPHO_08610 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CPHO_10990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CPHO_08050 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CPHO_05850 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CPHO_03155 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CPHO_05820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CPHO_05760 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CPHO_05845 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CPHO_09935 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CPHO_03200 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cpho00720]
D CPHO_09935 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CPHO_09800 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CPHO_03200 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CPHO_08055 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CPHO_01340 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CPHO_01345 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CPHO_01335 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_09895 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CPHO_05950 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CPHO_06060 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CPHO_09990 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CPHO_00105 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CPHO_10915 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CPHO_10910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CPHO_06835 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:cpho00680]
D CPHO_07980 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CPHO_07985 dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CPHO_07975 ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CPHO_08110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CPHO_08175 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CPHO_09935 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CPHO_03200 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CPHO_10990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CPHO_08050 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CPHO_07330 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CPHO_10910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CPHO_10915 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CPHO_06835 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CPHO_01595 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CPHO_06955 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CPHO_09185 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:cpho00910]
D CPHO_07585 membrane protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D CPHO_04560 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CPHO_03840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_03985 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_02130 beta-hydroxylase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cpho00920]
D CPHO_05540 oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CPHO_09090 MFS transporter K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CPHO_04920 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CPHO_08375 hypothetical protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CPHO_11015 sulfultransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CPHO_09790 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CPHO_02625 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CPHO_02630 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CPHO_09980 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cpho00061]
D CPHO_09795 acetyl-COA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D CPHO_03755 hypothetical protein K02078 acpP; acyl carrier protein
D CPHO_01550 ACP S-malonyltransferase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CPHO_02950 3-oxoacyl-ACP synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CPHO_00410 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CPHO_01570 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01580 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_03470 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cpho00071]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_06825 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CPHO_01570 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01580 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_03470 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_08205 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:cpho00074]
D CPHO_09795 acetyl-COA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D CPHO_02970 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CPHO_04935 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D CPHO_03755 hypothetical protein K02078 acpP; acyl carrier protein
D CPHO_01550 ACP S-malonyltransferase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CPHO_02950 3-oxoacyl-ACP synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CPHO_11405 methylmalonyl-CoA carboxyltransferase K27093 accD4; long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.- 2.1.3.-]
D CPHO_09765 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CPHO_09760 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CPHO_09770 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CPHO_11430 acyl-CoA synthase K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-]
D CPHO_11410 polyketide synthase K12437 pks13; polyketide synthase 13
D CPHO_03060 short-chain dehydrogenase K27306 cmrA; mycolic acid reductase
D CPHO_11460 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_01295 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_03395 hypothetical protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_02440 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cpho00561]
D CPHO_04550 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CPHO_11600 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CPHO_06365 HAD family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D CPHO_04135 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CPHO_11460 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_01295 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_03395 hypothetical protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_02440 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_00270 lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:cpho00564]
D CPHO_06645 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CPHO_11605 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CPHO_04135 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CPHO_11670 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CPHO_04800 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CPHO_05005 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CPHO_10865 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cpho00600]
D CPHO_04675 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cpho00230]
D CPHO_02715 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CPHO_08585 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CPHO_02460 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CPHO_02340 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CPHO_08860 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CPHO_10925 hypothetical protein K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CPHO_02435 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CPHO_02425 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CPHO_02430 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CPHO_02465 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CPHO_09725 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CPHO_09720 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CPHO_02360 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CPHO_02350 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CPHO_08855 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CPHO_05470 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CPHO_05480 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CPHO_01980 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CPHO_04265 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CPHO_05930 nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D CPHO_10725 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CPHO_10100 oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CPHO_10105 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CPHO_03225 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CPHO_02830 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CPHO_10090 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CPHO_05715 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CPHO_06730 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CPHO_02760 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CPHO_06725 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CPHO_02765 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CPHO_03575 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CPHO_05475 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CPHO_08160 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CPHO_01240 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CPHO_10975 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CPHO_00275 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CPHO_10325 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CPHO_02555 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CPHO_02550 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CPHO_02545 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:cpho00240]
D CPHO_05700 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CPHO_05695 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CPHO_05685 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CPHO_05690 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CPHO_06010 diguanylate cyclase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CPHO_11005 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CPHO_05705 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CPHO_04790 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CPHO_03225 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CPHO_09775 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CPHO_06300 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CPHO_05480 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CPHO_09840 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CPHO_05680 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CPHO_03910 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CPHO_11195 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CPHO_06730 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CPHO_02760 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CPHO_06725 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CPHO_02765 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CPHO_09570 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CPHO_05285 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CPHO_08415 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CPHO_03905 pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D CPHO_09095 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CPHO_04970 thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpho00250]
D CPHO_04360 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CPHO_04080 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CPHO_11175 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CPHO_03110 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CPHO_06050 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CPHO_06410 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CPHO_06405 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CPHO_10975 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CPHO_02350 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CPHO_05685 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CPHO_09710 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CPHO_12150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CPHO_04560 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CPHO_09675 aldehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CPHO_03840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_03985 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_05700 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CPHO_05695 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CPHO_03000 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CPHO_02430 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CPHO_10190 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CPHO_02460 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cpho00260]
D CPHO_01025 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CPHO_01030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CPHO_07625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CPHO_07620 serine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CPHO_03870 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CPHO_08110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CPHO_04550 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CPHO_01595 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CPHO_06955 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CPHO_09185 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CPHO_04035 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CPHO_04030 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_04025 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CPHO_05535 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CPHO_04410 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CPHO_12070 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CPHO_12065 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cpho00270]
D CPHO_02625 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CPHO_02630 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CPHO_03440 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CPHO_00110 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CPHO_05730 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CPHO_11120 nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CPHO_04265 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CPHO_00945 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_03295 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_10225 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_01390 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CPHO_01025 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CPHO_01030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CPHO_07625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CPHO_07620 serine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CPHO_09980 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CPHO_09975 hypothetical protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CPHO_04060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CPHO_11015 sulfultransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CPHO_09790 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CPHO_10905 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CPHO_03200 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CPHO_05535 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CPHO_06955 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CPHO_09185 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cpho00280]
D CPHO_04060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_09795 acetyl-COA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D CPHO_09765 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CPHO_09760 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CPHO_09770 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CPHO_06860 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CPHO_01690 3-hydroxyacid dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CPHO_06865 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpho00290]
D CPHO_04410 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CPHO_06660 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CPHO_06655 isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CPHO_06950 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CPHO_07265 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CPHO_07260 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CPHO_07255 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CPHO_07275 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CPHO_04060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CPHO_11175 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CPHO_01015 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cpho00300]
D CPHO_07625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CPHO_01025 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CPHO_01030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CPHO_04320 glucose dehydrogenase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CPHO_04975 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CPHO_04965 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CPHO_07880 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CPHO_06425 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CPHO_07870 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CPHO_05105 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CPHO_07640 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CPHO_04220 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CPHO_04225 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cpho00310]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_06825 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_09710 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CPHO_12150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cpho00220]
D CPHO_06420 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CPHO_06410 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CPHO_06405 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CPHO_02555 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CPHO_02550 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CPHO_02545 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D CPHO_03000 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CPHO_02430 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CPHO_03840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_03985 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_05700 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CPHO_05695 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CPHO_04560 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CPHO_11175 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CPHO_06435 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CPHO_10855 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D CPHO_06430 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CPHO_06440 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CPHO_06425 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cpho00330]
D CPHO_11650 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CPHO_01625 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CPHO_09675 aldehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CPHO_03280 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CPHO_03310 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:cpho00340]
D CPHO_06045 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CPHO_06040 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CPHO_04510 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CPHO_04495 phosphoribosyl isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CPHO_04490 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CPHO_04505 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CPHO_04475 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CPHO_04470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_00760 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_12120 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_09325 histidinol phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D CPHO_04465 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CPHO_07750 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CPHO_07745 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CPHO_07740 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CPHO_07760 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:cpho00350]
D CPHO_04470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_00760 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_12120 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_08205 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CPHO_12170 betaine-aldehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D CPHO_12180 hypothetical protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D CPHO_12160 2-oxo-hepta-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D CPHO_12155 alpha-dehydro-beta-deoxy-D-glucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D CPHO_09710 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CPHO_12150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:cpho00360]
D CPHO_12195 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CPHO_12205 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D CPHO_12210 phenylacetate-CoA oxygenase K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D CPHO_12215 phenylacetate-CoA oxygenase K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D CPHO_12220 phenylacetate-CoA oxygenase K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D CPHO_12225 phenylacetic acid degradation protein K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D CPHO_12230 phenylacetic acid degradation protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D CPHO_12260 enoyl-CoA hydratase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_12250 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CPHO_04470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_00760 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_12120 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_11650 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:cpho00380]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_06825 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_11650 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CPHO_01050 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpho00400]
D CPHO_04155 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CPHO_05615 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CPHO_05620 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CPHO_05610 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CPHO_09505 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CPHO_05605 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CPHO_12045 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CPHO_12050 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CPHO_12055 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CPHO_04495 phosphoribosyl isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CPHO_04520 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CPHO_12060 indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D CPHO_12070 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CPHO_12065 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CPHO_08900 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D CPHO_00800 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CPHO_11645 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CPHO_04470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_00760 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_12120 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cpho00410]
D CPHO_08960 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CPHO_10680 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_06865 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:cpho00430]
D CPHO_03110 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CPHO_10915 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CPHO_10910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cpho00450]
D CPHO_03440 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CPHO_00110 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CPHO_05905 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CPHO_12365 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CPHO_07965 segregation protein B K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CPHO_07955 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CPHO_08705 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cpho00460]
D CPHO_04360 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CPHO_08110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cpho00470]
D CPHO_10175 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CPHO_06640 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CPHO_03000 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CPHO_02430 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CPHO_02815 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CPHO_04235 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CPHO_05105 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CPHO_07640 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cpho00480]
D CPHO_10835 carboxylate--amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CPHO_04055 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CPHO_03145 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CPHO_12355 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CPHO_09895 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CPHO_06210 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CPHO_05840 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cpho00515]
D CPHO_08725 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cpho00514]
D CPHO_08725 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cpho00511]
D CPHO_04675 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cpho00542]
D CPHO_07535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpho00541]
D CPHO_08765 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CPHO_05215 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CPHO_11590 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CPHO_11190 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CPHO_01275 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CPHO_01285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CPHO_01280 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D CPHO_09585 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CPHO_09605 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CPHO_01965 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CPHO_08580 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CPHO_03595 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CPHO_03695 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:cpho00550]
D CPHO_02640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CPHO_01385 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CPHO_04250 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CPHO_04235 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CPHO_04220 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CPHO_06640 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CPHO_04225 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CPHO_03535 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CPHO_06020 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CPHO_04230 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CPHO_04245 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CPHO_04215 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CPHO_00145 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CPHO_09860 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CPHO_10735 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CPHO_00990 UDP-N-acetylmuramyl peptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CPHO_00985 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cpho00552]
D CPHO_06020 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CPHO_07535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:cpho00572]
D CPHO_07535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CPHO_09630 alpha-D-GlcNAc-diphosphoryl polyprenol, alpha-3-L-rhamnosyl transferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D CPHO_00655 glycosyl transferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D CPHO_11480 glycosyl transferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D CPHO_00630 membrane protein K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D CPHO_11465 membrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CPHO_11335 membrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D CPHO_09635 LytR family transcriptional regulator K27775 lcp1; cell wall biosynthesis protein
D CPHO_11460 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_01295 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_03395 hypothetical protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D CPHO_02440 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
C 00543 Exopolysaccharide biosynthesis [PATH:cpho00543]
D CPHO_07535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CPHO_02625 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cpho00730]
D CPHO_01410 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CPHO_06185 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CPHO_07420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CPHO_04720 oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D CPHO_05305 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CPHO_04710 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CPHO_04725 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CPHO_06630 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CPHO_09510 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CPHO_10325 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cpho00740]
D CPHO_05775 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CPHO_05765 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CPHO_05780 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CPHO_05770 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CPHO_04945 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CPHO_05540 oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
C 00750 Vitamin B6 metabolism [PATH:cpho00750]
D CPHO_03520 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CPHO_09185 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CPHO_03870 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CPHO_09945 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D CPHO_09940 glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cpho00760]
D CPHO_02790 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CPHO_01980 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CPHO_05480 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CPHO_03325 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CPHO_02740 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CPHO_05010 competence protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CPHO_02995 amidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CPHO_00300 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CPHO_06355 inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CPHO_09710 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CPHO_12150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cpho00770]
D CPHO_07265 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CPHO_07260 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CPHO_07255 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CPHO_07275 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CPHO_08940 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CPHO_08960 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CPHO_10680 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CPHO_08115 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CPHO_05725 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CPHO_06600 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CPHO_06525 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CPHO_02970 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CPHO_04060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:cpho00780]
D CPHO_00410 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CPHO_10675 hypothetical protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CPHO_02905 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CPHO_02910 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CPHO_00255 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CPHO_09735 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cpho00785]
D CPHO_04015 lipoate--protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CPHO_04010 radical SAM protein K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_03765 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CPHO_04045 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CPHO_07795 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CPHO_04035 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CPHO_04030 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CPHO_04025 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cpho00790]
D CPHO_10715 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CPHO_09335 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CPHO_10705 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CPHO_10700 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CPHO_07860 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CPHO_10710 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CPHO_09100 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CPHO_03210 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CPHO_05775 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CPHO_08105 hypothetical protein K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D CPHO_02480 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CPHO_07565 molybdenum cofactor biosynthesis protein MoeA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CPHO_07575 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CPHO_00735 molybdopterin converting factor K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CPHO_00745 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CPHO_07570 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CPHO_08760 molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CPHO_07580 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cpho00670]
D CPHO_09100 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CPHO_06060 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CPHO_09990 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CPHO_08110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CPHO_08860 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CPHO_08855 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CPHO_05745 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CPHO_04030 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CPHO_09095 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CPHO_04970 thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CPHO_00105 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CPHO_08770 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cpho00860]
D CPHO_06890 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_00920 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_01645 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CPHO_01700 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CPHO_01660 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CPHO_01650 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CPHO_01675 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CPHO_01680 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CPHO_05965 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CPHO_05320 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D CPHO_01655 uroporphyrin-III methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CPHO_05855 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CPHO_05865 cytochrome B561 K02259 COX15; heme a synthase [EC:1.17.99.9]
D CPHO_06140 hypothetical protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D CPHO_04065 hypothetical protein K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CPHO_03805 hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CPHO_00285 heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpho00130]
D CPHO_01815 ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CPHO_11145 isochorismate mutase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CPHO_01800 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CPHO_01785 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CPHO_01775 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CPHO_01780 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CPHO_06205 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D CPHO_01745 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cpho00900]
D CPHO_05305 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CPHO_04815 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CPHO_02165 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CPHO_08680 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CPHO_02170 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CPHO_04825 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CPHO_08025 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_03455 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CPHO_04175 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CPHO_08120 farnesyl-diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CPHO_03535 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cpho00906]
D CPHO_02270 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:cpho00907]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CPHO_05850 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cpho00523]
D CPHO_01275 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CPHO_01285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CPHO_01280 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cpho01053]
D CPHO_11145 isochorismate mutase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CPHO_11155 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D CPHO_04935 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D CPHO_11140 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D CPHO_11125 hypothetical protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01055 Biosynthesis of vancomycin group antibiotics
D CPHO_01285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cpho00332]
D CPHO_03280 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CPHO_03310 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cpho00261]
D CPHO_01025 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CPHO_01030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CPHO_04320 glucose dehydrogenase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CPHO_04975 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CPHO_04965 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cpho00521]
D CPHO_04325 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_04130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_02715 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CPHO_04500 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CPHO_05270 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CPHO_01275 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CPHO_01285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CPHO_01280 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CPHO_04325 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2]
D CPHO_04130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cpho00525]
D CPHO_01275 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CPHO_01285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cpho00401]
D CPHO_00800 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CPHO_04470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_00760 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_12120 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CPHO_12045 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CPHO_12050 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CPHO_00410 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CPHO_03755 hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CPHO_05730 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cpho00362]
D CPHO_06825 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CPHO_12250 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:cpho00627]
D CPHO_11650 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CPHO_04595 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CPHO_12190 phenol 2-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cpho00625]
D CPHO_08205 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
D CPHO_12190 phenol 2-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:cpho00643]
D CPHO_11650 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D CPHO_02555 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CPHO_02550 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CPHO_02545 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
D CPHO_06845 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cpho00626]
D CPHO_08205 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cpho03020]
D CPHO_10660 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CPHO_10655 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CPHO_10290 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CPHO_05720 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CPHO_09245 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cpho03010]
D CPHO_06540 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CPHO_04780 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CPHO_10490 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CPHO_10295 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CPHO_10350 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CPHO_11850 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CPHO_10575 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CPHO_10365 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CPHO_10230 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CPHO_10525 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CPHO_10300 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CPHO_10580 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CPHO_10305 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CPHO_08830 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CPHO_04950 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CPHO_04670 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CPHO_10475 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CPHO_08835 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CPHO_10500 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CPHO_03380 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CPHO_02015 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CPHO_10505 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CPHO_10520 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CPHO_10515 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CPHO_10385 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CPHO_10360 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CPHO_02035 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CPHO_11840 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CPHO_02030 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CPHO_02010 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CPHO_10235 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CPHO_10395 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CPHO_10340 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CPHO_10485 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CPHO_10285 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CPHO_10355 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CPHO_04730 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CPHO_06465 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CPHO_03235 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CPHO_10495 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CPHO_10510 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CPHO_10390 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CPHO_08590 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CPHO_03240 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CPHO_08820 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CPHO_10480 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CPHO_10345 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CPHO_08815 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CPHO_08810 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CPHO_08825 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CPHO_06470 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CPHO_02745 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CPHO_09270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_11780 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_02680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_06390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_09265 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_11775 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_06385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_02685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_02690 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_06380 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_09260 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_11770 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpho00970]
D CPHO_00065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CPHO_02730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CPHO_00075 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CPHO_07670 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CPHO_09125 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CPHO_00790 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CPHO_03075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CPHO_03605 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CPHO_02605 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CPHO_02610 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CPHO_05360 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CPHO_06885 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CPHO_06880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CPHO_06740 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CPHO_02600 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CPHO_03160 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_11200 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_05355 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_05345 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_05370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_03045 tRNA-His K14226 tRNA-His; tRNA His
D CPHO_00060 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CPHO_06555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_05995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_00170 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_02845 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_08155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_02540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CPHO_03010 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CPHO_09385 tRNA-Met K14230 tRNA-Met; tRNA Met
D CPHO_01990 tRNA-Met K14230 tRNA-Met; tRNA Met
D CPHO_03720 tRNA-Met K14230 tRNA-Met; tRNA Met
D CPHO_02615 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CPHO_01065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CPHO_03170 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CPHO_06265 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CPHO_00820 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CPHO_00695 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CPHO_00765 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CPHO_00930 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CPHO_01985 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CPHO_01250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CPHO_02260 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CPHO_01995 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CPHO_01830 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CPHO_03775 tRNA-Val K14237 tRNA-Val; tRNA Val
D CPHO_05340 tRNA-Val K14237 tRNA-Val; tRNA Val
D CPHO_05365 tRNA-Val K14237 tRNA-Val; tRNA Val
D CPHO_05350 tRNA-Val K14237 tRNA-Val; tRNA Val
D CPHO_07960 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CPHO_06890 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_00920 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_07350 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CPHO_07325 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CPHO_07355 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CPHO_05580 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CPHO_05565 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CPHO_03550 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CPHO_05390 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CPHO_11620 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CPHO_07955 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CPHO_02195 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CPHO_08705 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CPHO_05745 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CPHO_03205 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CPHO_12005 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CPHO_04290 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CPHO_02080 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CPHO_07645 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CPHO_04885 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CPHO_05515 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CPHO_06455 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CPHO_06450 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CPHO_06395 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CPHO_09875 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cpho03060]
D CPHO_10330 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CPHO_02000 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CPHO_05825 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CPHO_05460 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CPHO_12400 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CPHO_06250 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CPHO_09540 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CPHO_04660 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CPHO_04605 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CPHO_02055 arsenic ABC transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CPHO_06110 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CPHO_07810 translocase K03117 tatB; sec-independent protein translocase protein TatB
D CPHO_06115 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D CPHO_04735 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CPHO_04740 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CPHO_04375 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cpho04122]
D CPHO_07420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CPHO_11015 sulfultransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CPHO_09790 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CPHO_07400 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CPHO_00735 molybdopterin converting factor K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CPHO_07565 molybdenum cofactor biosynthesis protein MoeA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CPHO_00750 molybdopterin biosynthesis protein MoaD2 K03636 moaD; sulfur-carrier protein
D CPHO_00730 molybdopterin biosynthesis protein MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CPHO_04705 hypothetical protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CPHO_07575 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CPHO_04715 hypothetical protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
D CPHO_06080 ATPase AAA K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:cpho03018]
D CPHO_03230 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CPHO_08175 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CPHO_04955 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CPHO_07725 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CPHO_00530 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CPHO_07555 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CPHO_04980 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CPHO_11100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CPHO_10135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_10770 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_08605 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CPHO_10760 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CPHO_12320 poly(A) polymerase PcnA K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cpho03030]
D CPHO_04440 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_09070 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_00995 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_06935 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_07385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_04400 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CPHO_00965 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CPHO_01245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CPHO_03355 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CPHO_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CPHO_11835 helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CPHO_03580 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CPHO_07195 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D CPHO_11845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CPHO_03805 hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CPHO_04745 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CPHO_06550 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CPHO_07375 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cpho03410]
D CPHO_01110 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CPHO_06625 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CPHO_02125 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CPHO_04585 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CPHO_11940 DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CPHO_08925 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CPHO_08745 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CPHO_10860 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CPHO_09885 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CPHO_06550 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CPHO_07375 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cpho03420]
D CPHO_08210 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CPHO_06485 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CPHO_06515 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CPHO_05790 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CPHO_08895 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_09425 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_09440 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_06550 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CPHO_07375 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CPHO_09245 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cpho03430]
D CPHO_08895 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_09425 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_09440 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_08030 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CPHO_08035 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CPHO_07195 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D CPHO_11845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CPHO_04400 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CPHO_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CPHO_00965 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CPHO_03355 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CPHO_01245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CPHO_04440 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_09070 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_00995 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_06935 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_07385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_07375 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CPHO_03375 modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CPHO_02880 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cpho03440]
D CPHO_07195 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D CPHO_11845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CPHO_00015 recombinase RecF K03629 recF; DNA replication and repair protein RecF
D CPHO_03530 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CPHO_00975 recombinase RecR K06187 recR; recombination protein RecR
D CPHO_05045 recombinase RecA K03553 recA; recombination protein RecA
D CPHO_06550 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CPHO_05440 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CPHO_05445 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CPHO_05435 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CPHO_00910 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CPHO_01535 DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CPHO_06615 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CPHO_11585 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CPHO_04400 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CPHO_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CPHO_00965 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CPHO_03355 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CPHO_01245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CPHO_04440 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_09070 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_00995 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_06935 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_07385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_05735 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cpho03250]
D CPHO_00120 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cpho02010]
D CPHO_07605 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D CPHO_07610 hypothetical protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CPHO_11030 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CPHO_11035 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D CPHO_11040 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D CPHO_11045 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CPHO_10620 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CPHO_10600 ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CPHO_10595 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CPHO_10590 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CPHO_09740 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D CPHO_09745 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D CPHO_09750 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D CPHO_02505 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CPHO_02510 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D CPHO_02515 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D CPHO_02520 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CPHO_05065 glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D CPHO_05060 glutamate ABC transporter permease K10006 gluC; glutamate transport system permease protein
D CPHO_05055 glutamate ABC transporter permease K10007 gluD; glutamate transport system permease protein
D CPHO_05070 glutamate ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D CPHO_10030 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CPHO_10040 methionine ABC transporter ATP-binding protein K02072 metI; D-methionine transport system permease protein
D CPHO_10035 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CPHO_01060 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_01130 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_03040 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_01145 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D CPHO_01140 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D CPHO_01135 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CPHO_10435 ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D CPHO_10420 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D CPHO_10425 peptide ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D CPHO_10430 peptide ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D CPHO_11525 iron siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CPHO_11510 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D CPHO_11505 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D CPHO_11500 fecE; iron-dicitrate transporter ATP-binding subunit K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CPHO_01765 iron ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CPHO_01755 manganese ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D CPHO_01750 zinc ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D CPHO_01760 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CPHO_05035 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D CPHO_05025 cobalt ABC transporter permease K16783 bioN; biotin transport system permease protein
D CPHO_05030 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CPHO_10630 ABC transporter K16785 ecfT; energy-coupling factor transport system permease protein
D CPHO_00675 sugar ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D CPHO_00670 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CPHO_03630 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D CPHO_03625 ABC transporter K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CPHO_11960 hypothetical protein K09813 hrtB; hemin transport system permease protein
D CPHO_11955 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CPHO_09300 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CPHO_09305 ABC transporter K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS) [PATH:cpho02060]
D CPHO_05145 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CPHO_05135 serine kinase K02784 ptsH; phosphocarrier protein HPr
D CPHO_02190 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_02180 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_06535 PTS mannose transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CPHO_05140 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cpho03070]
D CPHO_05460 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CPHO_02000 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CPHO_05825 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CPHO_10330 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CPHO_12400 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CPHO_06250 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CPHO_09540 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CPHO_04605 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CPHO_04660 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CPHO_06110 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CPHO_07810 translocase K03117 tatB; sec-independent protein translocase protein TatB
D CPHO_06115 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cpho02020]
D CPHO_09335 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CPHO_01600 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CPHO_01605 XRE family transcriptional regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CPHO_02505 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CPHO_05865 cytochrome B561 K02259 COX15; heme a synthase [EC:1.17.99.9]
D CPHO_08800 histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CPHO_08805 transcriptional regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D CPHO_08795 hypothetical protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CPHO_09560 histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CPHO_09565 transcriptional regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CPHO_00005 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CPHO_01175 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CPHO_01180 hypothetical protein K12510 tadB; tight adherence protein B
D CPHO_04655 glnD; protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CPHO_04650 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D CPHO_03840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_03985 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_01105 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CPHO_03000 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CPHO_03790 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CPHO_03595 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CPHO_03695 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cpho02024]
D CPHO_01390 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CPHO_12045 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CPHO_12050 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CPHO_04155 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CPHO_01570 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01580 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_03470 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01105 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CPHO_05765 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CPHO_01060 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_01130 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_03040 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_01145 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D CPHO_01140 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D CPHO_01135 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CPHO_04340 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CPHO_05465 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CPHO_03425 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CPHO_04345 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CPHO_03420 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CPHO_03415 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CPHO_04350 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CPHO_03410 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CPHO_04355 ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CPHO_12400 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CPHO_02000 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CPHO_05825 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CPHO_10330 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CPHO_06250 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CPHO_09540 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CPHO_04605 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CPHO_04660 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CPHO_05260 RNA polymerase sigma 70 K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CPHO_08175 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cpho01501]
D CPHO_11320 beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CPHO_01060 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_01130 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_03040 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_01145 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D CPHO_01140 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D CPHO_01135 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CPHO_04215 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cpho01502]
D CPHO_06640 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CPHO_10175 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CPHO_04225 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CPHO_04230 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CPHO_04245 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpho01503]
D CPHO_12375 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CPHO_00120 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cpho01000]
C 01001 Protein kinases [BR:cpho01001]
D CPHO_10900 serine/threonine protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D CPHO_00135 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CPHO_04160 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CPHO_09905 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CPHO_01600 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CPHO_08800 histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CPHO_09560 histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CPHO_02330 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins
C 01002 Peptidases and inhibitors [BR:cpho01002]
D CPHO_04375 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CPHO_05600 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CPHO_10090 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CPHO_04120 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CPHO_09850 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CPHO_05960 hypothetical protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D CPHO_02460 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CPHO_10190 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CPHO_04080 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CPHO_03255 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D CPHO_03270 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D CPHO_01840 fimbrial protein K07284 srtA; sortase A [EC:3.4.22.70]
D CPHO_11730 housekeeping sortase K07284 srtA; sortase A [EC:3.4.22.70]
D CPHO_11655 CAAX protease K07052 K07052; CAAX protease family protein
D CPHO_03145 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CPHO_12355 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CPHO_09910 peptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CPHO_00585 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CPHO_04055 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CPHO_07870 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CPHO_10790 peptidase M20 K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D CPHO_04835 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CPHO_10320 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CPHO_10720 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CPHO_00575 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D CPHO_08795 hypothetical protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CPHO_10265 hypothetical protein K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CPHO_02400 protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CPHO_09860 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CPHO_10735 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CPHO_03180 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CPHO_03185 clpP; Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CPHO_09405 signal protein PDZ K07177 K07177; Lon-like protease
D CPHO_05155 ArsR family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D CPHO_04735 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CPHO_04740 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CPHO_07110 hypothetical protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease
C 01003 Glycosyltransferases [BR:cpho01003]
D CPHO_06155 hypothetical protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CPHO_08725 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D CPHO_05410 GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D CPHO_04125 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D CPHO_10830 hypothetical protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D CPHO_01810 GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D CPHO_07835 glycosyl transferase family 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CPHO_07535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CPHO_07290 membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D CPHO_04145 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D CPHO_04170 alpha 1,6 mannopyranosyltransferase K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CPHO_05880 alpha 1,6 mannopyranosyltransferase K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CPHO_00640 arabinosyltransferase K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D CPHO_00630 membrane protein K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D CPHO_11465 membrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CPHO_11335 membrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D CPHO_00655 glycosyl transferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D CPHO_11480 glycosyl transferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D CPHO_09630 alpha-D-GlcNAc-diphosphoryl polyprenol, alpha-3-L-rhamnosyl transferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D CPHO_02245 trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CPHO_07855 glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpho01005]
D CPHO_07535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpho01011]
D CPHO_02640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CPHO_01385 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CPHO_04250 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CPHO_04235 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CPHO_04220 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CPHO_06640 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CPHO_10175 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CPHO_02815 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CPHO_04230 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CPHO_04245 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CPHO_06020 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CPHO_12335 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D CPHO_04215 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CPHO_00145 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CPHO_09860 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CPHO_10735 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CPHO_04120 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CPHO_09850 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CPHO_05960 hypothetical protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D CPHO_03255 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D CPHO_03270 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D CPHO_01840 fimbrial protein K07284 srtA; sortase A [EC:3.4.22.70]
D CPHO_11730 housekeeping sortase K07284 srtA; sortase A [EC:3.4.22.70]
D CPHO_05590 ABC transporter substrate-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CPHO_12375 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cpho01004]
D CPHO_01550 ACP S-malonyltransferase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CPHO_02950 3-oxoacyl-ACP synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CPHO_00410 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CPHO_11410 polyketide synthase K12437 pks13; polyketide synthase 13
D CPHO_06835 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CPHO_01570 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01580 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_03470 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_11430 acyl-CoA synthase K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-]
D CPHO_04135 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cpho01008]
D CPHO_04935 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D CPHO_11140 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D CPHO_11125 hypothetical protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01006 Prenyltransferases [BR:cpho01006]
D CPHO_04175 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CPHO_08120 farnesyl-diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CPHO_03535 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CPHO_02270 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CPHO_05100 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CPHO_01745 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CPHO_05855 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CPHO_11470 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:cpho01007]
D CPHO_06890 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_00920 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_06395 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CPHO_09875 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CPHO_02195 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CPHO_07645 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CPHO_08705 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CPHO_04290 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CPHO_03205 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CPHO_12005 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CPHO_02080 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CPHO_05565 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CPHO_05515 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CPHO_03550 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CPHO_11620 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CPHO_04885 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CPHO_05390 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CPHO_05580 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CPHO_06455 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CPHO_06450 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CPHO_11175 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CPHO_04470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_00760 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_12120 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CPHO_10675 hypothetical protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CPHO_03440 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CPHO_06425 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CPHO_02905 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CPHO_01700 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CPHO_04060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CPHO_09185 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cpho00194]
D CPHO_07490 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CPHO_07495 ATP F0F1 synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CPHO_07500 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CPHO_07505 ATP synthase F0F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CPHO_07510 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CPHO_07515 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CPHO_07520 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CPHO_07525 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cpho03000]
D CPHO_00945 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_03295 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_10225 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_05180 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CPHO_07305 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CPHO_05150 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CPHO_11625 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CPHO_03135 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D CPHO_03430 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D CPHO_09950 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CPHO_05945 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D CPHO_02635 LuxR family transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D CPHO_11085 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CPHO_03540 sugar ABC transporter substrate-binding protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CPHO_01105 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CPHO_03545 transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D CPHO_09820 MerR family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D CPHO_05015 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D CPHO_05220 toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D CPHO_01770 hypothetical protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CPHO_09735 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CPHO_09675 aldehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CPHO_06530 transcription antiterminator BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
D CPHO_09480 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CPHO_09620 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CPHO_01085 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CPHO_12385 cell division protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CPHO_02160 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CPHO_06415 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CPHO_03495 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D CPHO_03925 RNA polymerase sigma70 K05346 deoR; deoxyribonucleoside regulator
D CPHO_05680 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CPHO_12315 hypothetical protein K07735 algH; putative transcriptional regulator
D CPHO_05165 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D CPHO_04200 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cpho03021]
D CPHO_09245 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CPHO_10290 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CPHO_10660 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CPHO_10655 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CPHO_05720 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CPHO_05260 RNA polymerase sigma 70 K03086 rpoD; RNA polymerase primary sigma factor
D CPHO_05225 RNA polymerase sigma70 K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CPHO_09490 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CPHO_10125 RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CPHO_01045 RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CPHO_07820 RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CPHO_09700 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CPHO_04905 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CPHO_05635 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CPHO_02005 antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D CPHO_08140 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CPHO_07555 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cpho03019]
D CPHO_03230 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CPHO_04580 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CPHO_04980 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CPHO_03050 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CPHO_07725 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CPHO_00530 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CPHO_08175 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CPHO_04955 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CPHO_07555 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CPHO_11100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CPHO_10135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_10770 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_08605 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CPHO_10760 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CPHO_12320 poly(A) polymerase PcnA K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CPHO_05795 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D CPHO_06120 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D CPHO_05170 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D CPHO_00350 helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cpho03011]
D CPHO_06540 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CPHO_04780 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CPHO_10490 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CPHO_10295 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CPHO_10350 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CPHO_11850 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CPHO_10575 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CPHO_10365 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CPHO_10230 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CPHO_10525 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CPHO_10300 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CPHO_10580 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CPHO_10305 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CPHO_08830 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CPHO_04950 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CPHO_04670 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CPHO_10475 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CPHO_08835 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CPHO_10500 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CPHO_03380 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CPHO_02015 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CPHO_10505 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CPHO_10520 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CPHO_10515 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CPHO_10385 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CPHO_10360 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CPHO_11840 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CPHO_02030 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CPHO_02010 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CPHO_02035 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CPHO_10235 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CPHO_10395 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CPHO_10340 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CPHO_10485 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CPHO_10285 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CPHO_10355 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CPHO_04730 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CPHO_06465 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CPHO_03235 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CPHO_10495 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CPHO_10510 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CPHO_10390 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CPHO_03240 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CPHO_08820 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CPHO_10480 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CPHO_10345 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CPHO_08815 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CPHO_08810 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CPHO_08825 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CPHO_06470 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CPHO_02745 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CPHO_08590 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CPHO_02690 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_06380 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_09260 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_11770 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_09270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_11780 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_02680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_06390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_09265 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_11775 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_06385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_02685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cpho03009]
D CPHO_04580 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CPHO_03050 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CPHO_03525 GTPase Era K03595 era; GTPase
D CPHO_03245 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D CPHO_04905 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CPHO_05635 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CPHO_02005 antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D CPHO_08685 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CPHO_05750 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CPHO_06605 DNA methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CPHO_03505 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CPHO_12395 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CPHO_04205 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CPHO_08720 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CPHO_06360 cytochrome C oxidase subunit II K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CPHO_07845 SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CPHO_02200 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CPHO_04805 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CPHO_11760 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CPHO_07895 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CPHO_06305 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CPHO_04380 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CPHO_10155 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CPHO_04685 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CPHO_03230 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CPHO_05585 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CPHO_07725 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CPHO_09510 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CPHO_06295 GTP-binding protein EngA K03977 engA; GTPase
D CPHO_07540 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CPHO_05475 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CPHO_04915 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CPHO_04900 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CPHO_00400 RNA-binding protein S4 K14761 rlbA; ribosome-associated protein
D CPHO_03330 Iojap K09710 ybeB; ribosome-associated protein
D CPHO_03515 heat-shock protein K07042 ybeY; probable rRNA maturation factor
D CPHO_08005 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D CPHO_04575 DNA-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cpho03016]
D CPHO_06890 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_00920 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_04885 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CPHO_04290 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CPHO_12005 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CPHO_08705 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CPHO_07645 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CPHO_02080 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CPHO_05565 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CPHO_05580 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CPHO_03550 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CPHO_05390 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CPHO_11620 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CPHO_02195 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CPHO_03205 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CPHO_05515 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CPHO_06455 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CPHO_06450 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CPHO_06395 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CPHO_09875 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CPHO_05230 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CPHO_06075 SAM-dependent methlyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D CPHO_11370 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CPHO_10275 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CPHO_04940 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CPHO_07420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CPHO_07540 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CPHO_05100 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CPHO_07965 segregation protein B K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CPHO_09090 MFS transporter K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CPHO_12410 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CPHO_12415 bacterial RNase P K01978 rnpB; M1 RNA
D CPHO_02825 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CPHO_05310 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CPHO_03090 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D CPHO_09495 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CPHO_00810 cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CPHO_05075 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CPHO_04690 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CPHO_09995 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CPHO_06460 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CPHO_11760 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CPHO_07895 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CPHO_07400 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CPHO_02475 aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D CPHO_00835 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CPHO_10730 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CPHO_10160 peptidase M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CPHO_10150 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CPHO_10170 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CPHO_04955 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cpho03012]
D CPHO_04910 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CPHO_06475 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CPHO_04785 elongation factor Ts K02357 tsf; elongation factor Ts
D CPHO_10565 elongation factor Tu K02358 tuf; elongation factor Tu
D CPHO_10570 fusA; elongation factor G K02355 fusA; elongation factor G
D CPHO_07950 translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D CPHO_07550 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CPHO_04795 ribosome-recycling factor K02838 frr; ribosome recycling factor
D CPHO_07545 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CPHO_08600 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CPHO_08615 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CPHO_10310 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CPHO_05630 elongation factor P K02356 efp; elongation factor P
D CPHO_09315 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CPHO_08625 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cpho03110]
D CPHO_11020 ATPase AAA K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CPHO_02100 NDP-hexose 4-ketoreductase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CPHO_03190 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CPHO_11100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CPHO_10135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_10770 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_11090 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CPHO_03500 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CPHO_11095 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CPHO_04425 tRNA synthetase RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D CPHO_10140 molecular chaperone GroES K04078 groES; chaperonin GroES
D CPHO_10720 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CPHO_07525 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CPHO_05380 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CPHO_10265 hypothetical protein K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CPHO_00120 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CPHO_05500 isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CPHO_11810 thioredoxin K03671 TXN; thioredoxin
D CPHO_12370 thioredoxin K03671 TXN; thioredoxin
D CPHO_07465 thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:cpho04131]
D CPHO_03225 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CPHO_00705 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CPHO_02055 arsenic ABC transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CPHO_05810 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CPHO_08610 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CPHO_01595 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CPHO_04530 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CPHO_02320 membrane protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:cpho04121]
D CPHO_06090 hypothetical protein K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cpho03051]
D CPHO_06080 ATPase AAA K13527 mpa; proteasome-associated ATPase
D CPHO_06095 Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D CPHO_06100 hypothetical protein K13572 pafB; proteasome accessory factor B
D CPHO_06105 hypothetical protein K13573 pafC; proteasome accessory factor C
D CPHO_06085 proteasomal accessory factor K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cpho03032]
D CPHO_00945 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_03295 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_10225 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_00005 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CPHO_11835 helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CPHO_03580 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CPHO_07195 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D CPHO_11845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CPHO_04400 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CPHO_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CPHO_03355 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CPHO_01245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CPHO_04440 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_09070 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_00995 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_06935 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_07385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_00965 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CPHO_03805 hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CPHO_04745 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CPHO_06550 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CPHO_07375 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CPHO_03375 modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CPHO_02880 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CPHO_00025 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CPHO_01220 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cpho03036]
D CPHO_00945 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_03295 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_10225 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_04580 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CPHO_11705 histone K26249 lsr2; nucleoid-associated protein Lsr2
D CPHO_00005 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CPHO_07305 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CPHO_04600 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D CPHO_06315 segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CPHO_06310 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CPHO_09305 ABC transporter K09812 ftsE; cell division transport system ATP-binding protein
D CPHO_04215 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CPHO_04990 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CPHO_04255 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D CPHO_04240 cell division protein K03588 ftsW; cell division protein FtsW
D CPHO_09300 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CPHO_04260 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CPHO_12375 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CPHO_04275 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D CPHO_06320 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D CPHO_12390 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D CPHO_12445 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D CPHO_12385 cell division protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CPHO_12395 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CPHO_04770 recombinase XerC K03733 xerC; integrase/recombinase XerC
D CPHO_06330 recombinase XerC K04763 xerD; integrase/recombinase XerD
D CPHO_07805 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CPHO_05805 sporulation protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cpho03400]
D CPHO_08740 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CPHO_08570 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CPHO_06625 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CPHO_02125 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CPHO_01110 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CPHO_09245 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CPHO_00245 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CPHO_10885 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CPHO_05285 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CPHO_08415 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CPHO_00385 DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D CPHO_08745 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CPHO_04585 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CPHO_11940 DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CPHO_08925 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CPHO_10860 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CPHO_09885 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CPHO_07375 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CPHO_06550 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CPHO_06485 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CPHO_06515 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CPHO_05790 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CPHO_08895 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_09425 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_09440 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CPHO_10660 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CPHO_10655 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CPHO_10290 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CPHO_05720 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CPHO_08210 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CPHO_08030 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CPHO_08035 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CPHO_04400 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CPHO_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CPHO_03355 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CPHO_01245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CPHO_04440 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_09070 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_00995 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_06935 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_07385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CPHO_00965 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CPHO_07195 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D CPHO_11845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CPHO_03375 modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CPHO_02880 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CPHO_05045 recombinase RecA K03553 recA; recombination protein RecA
D CPHO_05440 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CPHO_05445 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CPHO_05435 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CPHO_08445 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D CPHO_05735 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CPHO_02140 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CPHO_00015 recombinase RecF K03629 recF; DNA replication and repair protein RecF
D CPHO_00910 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CPHO_01535 DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CPHO_06615 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CPHO_11585 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CPHO_03530 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CPHO_00975 recombinase RecR K06187 recR; recombination protein RecR
D CPHO_06350 DNA recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CPHO_10455 CRISPR-associated protein Cse1 K15342 cas1; CRISP-associated protein Cas1
D CPHO_00025 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CPHO_01220 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CPHO_00530 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CPHO_04305 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CPHO_05155 ArsR family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D CPHO_10065 DNA polymerase K14161 imuB; protein ImuB
D CPHO_10025 DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CPHO_05050 recombinase RecX K03565 recX; regulatory protein
D CPHO_02785 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CPHO_09085 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CPHO_06650 NTP pyrophosphohydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D CPHO_06335 ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D CPHO_06730 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CPHO_02760 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CPHO_06725 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CPHO_02765 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CPHO_04920 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cpho03029]
D CPHO_04910 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CPHO_06475 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CPHO_04785 elongation factor Ts K02357 tsf; elongation factor Ts
D CPHO_10565 elongation factor Tu K02358 tuf; elongation factor Tu
D CPHO_10570 fusA; elongation factor G K02355 fusA; elongation factor G
D CPHO_03525 GTPase Era K03595 era; GTPase
D CPHO_06395 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CPHO_12005 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CPHO_05565 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CPHO_03550 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CPHO_07645 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CPHO_07350 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CPHO_07325 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CPHO_07355 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CPHO_07195 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D CPHO_11845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CPHO_11100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CPHO_11095 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CPHO_10135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_10770 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_10140 molecular chaperone GroES K04078 groES; chaperonin GroES
D CPHO_11090 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CPHO_03500 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CPHO_07420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CPHO_07805 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CPHO_05855 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CPHO_05865 cytochrome B561 K02259 COX15; heme a synthase [EC:1.17.99.9]
D CPHO_12400 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cpho02000]
D CPHO_03445 iron ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CPHO_08670 glycerophosphodiester phosphodiesterase K15738 uup; ABC transport system ATP-binding/permease protein
D CPHO_07605 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D CPHO_07610 hypothetical protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CPHO_11030 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CPHO_11035 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D CPHO_11040 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D CPHO_11045 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CPHO_10620 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CPHO_10600 ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CPHO_10595 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CPHO_10590 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CPHO_09740 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D CPHO_09745 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D CPHO_09750 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D CPHO_02955 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CPHO_02960 ribose ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D CPHO_02965 ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CPHO_02505 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CPHO_02510 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D CPHO_02515 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D CPHO_02520 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CPHO_05065 glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D CPHO_05060 glutamate ABC transporter permease K10006 gluC; glutamate transport system permease protein
D CPHO_05055 glutamate ABC transporter permease K10007 gluD; glutamate transport system permease protein
D CPHO_05070 glutamate ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D CPHO_10030 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CPHO_10040 methionine ABC transporter ATP-binding protein K02072 metI; D-methionine transport system permease protein
D CPHO_10035 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CPHO_12040 sugar ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CPHO_12035 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CPHO_12030 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CPHO_10895 ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CPHO_06575 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CPHO_06580 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D CPHO_06585 arginine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CPHO_01060 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_01130 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_03040 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CPHO_01145 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D CPHO_01140 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D CPHO_01135 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CPHO_10435 ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D CPHO_10420 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D CPHO_10425 peptide ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D CPHO_10430 peptide ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D CPHO_04340 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CPHO_05465 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CPHO_03425 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CPHO_04345 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CPHO_03420 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CPHO_03415 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CPHO_04350 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CPHO_03410 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CPHO_04355 ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CPHO_10940 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D CPHO_10945 ABC transporter permease K25133 hmuU; heme transport system permease protein
D CPHO_10950 hemin ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D CPHO_11525 iron siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CPHO_11510 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D CPHO_11505 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D CPHO_11500 fecE; iron-dicitrate transporter ATP-binding subunit K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CPHO_09290 iron ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CPHO_09280 iron ABC transporter permease K25283 yclO; iron-siderophore transport system permease protein
D CPHO_09285 iron ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D CPHO_09275 iron ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CPHO_02585 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CPHO_02595 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D CPHO_07445 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CPHO_02590 histidinol phosphatase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CPHO_01765 iron ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CPHO_01755 manganese ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D CPHO_01750 zinc ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D CPHO_01760 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CPHO_02280 ABC transporter ATP-binding protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D CPHO_02285 ABC transporter ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D CPHO_05035 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D CPHO_05025 cobalt ABC transporter permease K16783 bioN; biotin transport system permease protein
D CPHO_05030 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CPHO_07775 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D CPHO_10630 ABC transporter K16785 ecfT; energy-coupling factor transport system permease protein
D CPHO_10635 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CPHO_10640 membrane protein K16925 ykoE; energy-coupling factor transport system permease protein
D CPHO_10645 membrane protein K16925 ykoE; energy-coupling factor transport system permease protein
D CPHO_02220 hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CPHO_02210 helicase K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D CPHO_02215 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D CPHO_00675 sugar ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D CPHO_00670 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CPHO_03630 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D CPHO_03625 ABC transporter K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CPHO_11960 hypothetical protein K09813 hrtB; hemin transport system permease protein
D CPHO_11955 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CPHO_09300 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CPHO_09305 ABC transporter K09812 ftsE; cell division transport system ATP-binding protein
D CPHO_10875 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CPHO_01445 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CPHO_09915 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CPHO_05870 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CPHO_10880 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CPHO_01440 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CPHO_11790 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CPHO_05875 spermidine/putrescine ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CPHO_08885 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CPHO_05130 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CPHO_10085 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CPHO_02700 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CPHO_08880 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CPHO_10080 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CPHO_02695 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CPHO_05900 sufC; cysteine desulfurase K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CPHO_12295 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CPHO_00785 carboxylate transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D CPHO_04925 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D CPHO_10870 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CPHO_09890 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CPHO_01975 multidrug MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CPHO_02095 MFS transporter permease K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D CPHO_11685 membrane protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D CPHO_02320 membrane protein K06902 UMF1; MFS transporter, UMF1 family
D CPHO_11825 membrane protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CPHO_02645 sugar transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CPHO_05145 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CPHO_05135 serine kinase K02784 ptsH; phosphocarrier protein HPr
D CPHO_02190 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_02180 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CPHO_06535 PTS mannose transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CPHO_09435 Ion channel protein K10716 kch; voltage-gated potassium channel
D CPHO_12015 hypothetical protein K10716 kch; voltage-gated potassium channel
D CPHO_04020 ammonium transporter K03320 amt; ammonium transporter, Amt family
D CPHO_08780 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D CPHO_03125 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel
D CPHO_06195 magnesium transporter K03284 corA; magnesium transporter
D CPHO_02705 hypothetical protein K06199 crcB; fluoride exporter
D CPHO_02710 hypothetical protein K06199 crcB; fluoride exporter
D CPHO_03480 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CPHO_03485 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CPHO_08305 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CPHO_12130 aromatic amino acid transporter K11732 pheP; phenylalanine-specific permease
D CPHO_07875 amino acid transporter K16237 aroP; aromatic amino acid permease
D CPHO_07885 amino acid transporter K16237 aroP; aromatic amino acid permease
D CPHO_08195 lysine transporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CPHO_11380 RND transporter K20470 mmpL3; trehalose monomycolate/heme transporter
D CPHO_00545 cation transporter K03297 emrE; small multidrug resistance pump
D CPHO_00550 cation transporter K03297 emrE; small multidrug resistance pump
D CPHO_04300 multidrug DMT transporter permease K11939 rhtA; inner membrane transporter RhtA
D CPHO_04395 protein rarD K05786 rarD; chloramphenicol-sensitive protein RarD
D CPHO_08905 sodium:proton antiporter K07084 yuiF; putative amino acid transporter
D CPHO_06055 C4-dicarboxylate ABC transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CPHO_07650 L-lactate permease K03303 lutP; lactate permease
D CPHO_07705 proline:sodium symporter PutP K11928 putP; sodium/proline symporter
D CPHO_09160 acetate permease K14393 actP; cation/acetate symporter
D CPHO_03025 ATPase K03498 trkH; trk/ktr system potassium uptake protein
D CPHO_03030 hypothetical protein K03499 trkA; trk/ktr system potassium uptake protein
D CPHO_03780 uracil-xanthine permease K24206 uacT; uric acid transporter
D CPHO_09205 MFS transporter K06901 pbuG; adenine/guanine/hypoxanthine permease
D CPHO_03105 chromate transporter K07240 chrA; chromate transporter
D CPHO_00950 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D CPHO_02055 arsenic ABC transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CPHO_00780 arsenite transporter K03325 ACR3; arsenite transporter
D CPHO_10800 monovalent cation/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CPHO_10805 cation:proton antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CPHO_04630 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CPHO_10810 monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CPHO_10815 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CPHO_04635 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CPHO_10820 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CPHO_10825 monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CPHO_12335 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D CPHO_07310 lysine transporter LysE K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CPHO_03365 lysine transporter LysE K05835 rhtC; threonine efflux protein
D CPHO_12310 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D CPHO_12305 branched-chain amino acid ABC transporter permease K26606 azlD; branched chain amino acid efflux pump
D CPHO_08010 membrane protein K20469 K20469; putative heme transporter
D CPHO_00915 membrane protein K09125 yhhQ; queuosine precursor transporter
D CPHO_04240 cell division protein K03588 ftsW; cell division protein FtsW
D CPHO_00705 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CPHO_01715 cytochrome C biogenesis protein ResC K06196 ccdA; cytochrome c-type biogenesis protein
D CPHO_11385 membrane protein K20468 K20468; putative heme transporter
D CPHO_05375 copper resistance protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cpho02044]
D CPHO_05600 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CPHO_01175 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CPHO_01180 hypothetical protein K12510 tadB; tight adherence protein B
D CPHO_04280 membrane protein K02221 yggT; YggT family protein
D CPHO_03345 hypothetical protein K02237 comEA; competence protein ComEA
D CPHO_03350 hypothetical protein K02238 comEC; competence protein ComEC
D CPHO_10255 cell division protein FtsK K27086 eccC; ESX secretion system protein EccC
D CPHO_10265 hypothetical protein K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CPHO_10245 CFP-10-like protein K14956 esx; ESAT-6 family protein
D CPHO_10240 secretion protein K14956 esx; ESAT-6 family protein
D CPHO_06250 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CPHO_09540 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CPHO_02000 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CPHO_05460 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CPHO_05825 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CPHO_10330 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CPHO_04660 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CPHO_04605 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CPHO_12400 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CPHO_06110 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CPHO_07810 translocase K03117 tatB; sec-independent protein translocase protein TatB
D CPHO_06115 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cpho02042]
D CPHO_03480 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CPHO_03485 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CPHO_02445 membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cpho02022]
D CPHO_01600 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CPHO_01605 XRE family transcriptional regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CPHO_08800 histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CPHO_08805 transcriptional regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D CPHO_09560 histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CPHO_09565 transcriptional regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CPHO_02330 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CPHO_02325 alkaline phosphatase K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:cpho02035]
D CPHO_05600 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CPHO_01175 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cpho04812]
D CPHO_04260 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CPHO_06320 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D CPHO_12390 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D CPHO_12445 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D CPHO_12385 cell division protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cpho04147]
D CPHO_08175 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CPHO_05810 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CPHO_08610 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CPHO_05815 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CPHO_04530 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CPHO_00120 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CPHO_10135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_10770 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CPHO_11100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CPHO_08910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CPHO_10100 oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CPHO_10105 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CPHO_10565 elongation factor Tu K02358 tuf; elongation factor Tu
D CPHO_10905 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CPHO_12295 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CPHO_01570 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_01580 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_03470 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CPHO_06850 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CPHO_10325 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CPHO_05470 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CPHO_06405 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CPHO_06410 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CPHO_11545 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CPHO_03815 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CPHO_07455 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CPHO_11600 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CPHO_03840 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_03985 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CPHO_01660 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CPHO_06955 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CPHO_08855 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CPHO_01305 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CPHO_07425 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CPHO_05840 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CPHO_05820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CPHO_01595 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cpho02048]
D CPHO_10455 CRISPR-associated protein Cse1 K15342 cas1; CRISP-associated protein Cas1
D CPHO_10445 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD
D CPHO_10450 hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE
D CPHO_00500 DNA restriction-modification system, restriction enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CPHO_00495 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CPHO_03945 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CPHO_11765 restriction endonuclease, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CPHO_03375 modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CPHO_02880 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CPHO_00945 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_03295 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_10225 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CPHO_08975 DNA restriction-modification system, restriction enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5]
D CPHO_08980 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CPHO_08985 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CPHO_06280 DNA methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CPHO_00370 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D CPHO_09905 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CPHO_09115 toxin HicA K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D CPHO_01320 hypothetical protein K07341 doc; death on curing protein
D CPHO_04260 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CPHO_06890 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_00920 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CPHO_07420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cpho01504]
D CPHO_01975 multidrug MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cpho03100]
D CPHO_00065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CPHO_02730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CPHO_00075 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CPHO_07670 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CPHO_09125 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CPHO_00790 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CPHO_03075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CPHO_03605 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CPHO_02605 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CPHO_02610 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CPHO_05360 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CPHO_06885 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CPHO_06880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CPHO_06740 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CPHO_02600 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CPHO_03160 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_11200 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_05355 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_05345 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_05370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CPHO_03045 tRNA-His K14226 tRNA-His; tRNA His
D CPHO_00060 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CPHO_06555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_05995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_00170 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_02845 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_08155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CPHO_02540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CPHO_03010 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CPHO_09385 tRNA-Met K14230 tRNA-Met; tRNA Met
D CPHO_01990 tRNA-Met K14230 tRNA-Met; tRNA Met
D CPHO_03720 tRNA-Met K14230 tRNA-Met; tRNA Met
D CPHO_02615 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CPHO_01065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CPHO_03170 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CPHO_06265 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CPHO_00820 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CPHO_00695 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CPHO_00765 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CPHO_00930 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CPHO_01985 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CPHO_01250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CPHO_02260 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CPHO_01995 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CPHO_01830 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CPHO_03775 tRNA-Val K14237 tRNA-Val; tRNA Val
D CPHO_05340 tRNA-Val K14237 tRNA-Val; tRNA Val
D CPHO_05365 tRNA-Val K14237 tRNA-Val; tRNA Val
D CPHO_05350 tRNA-Val K14237 tRNA-Val; tRNA Val
D CPHO_07960 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CPHO_09270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_11780 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_02680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_06390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CPHO_09265 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_11775 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_06385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_02685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CPHO_02690 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_06380 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_09260 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_11770 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CPHO_12415 bacterial RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CPHO_00625 short-chain dehydrogenase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D CPHO_09170 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D CPHO_00620 decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CPHO_01820 FAD-linked oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D CPHO_09825 flavoprotein disulfide reductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CPHO_05860 NADPH--quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CPHO_04855 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D CPHO_11675 hypothetical protein K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CPHO_05325 methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CPHO_07300 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D CPHO_05385 peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D CPHO_02985 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CPHO_05505 hypothetical protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CPHO_05190 alkyl hydroperoxide reductase K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D CPHO_05185 alkyl hydroperoxide reductase K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D CPHO_03035 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CPHO_00290 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CPHO_09595 pyridine nucleotide-disulfide oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CPHO_09105 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D CPHO_02865 pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CPHO_06175 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CPHO_02500 hypothetical protein K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D CPHO_06150 acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CPHO_08700 hypothetical protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D CPHO_11340 hypothetical protein K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D CPHO_09215 hypothetical protein K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CPHO_01585 diguanylate cyclase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D CPHO_04525 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CPHO_06620 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CPHO_03845 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CPHO_07460 protein tyrosine phosphatase K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D CPHO_02670 phosphotriesterase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D CPHO_11130 hypothetical protein K23723 iroD; iron(III)-salmochelin esterase [EC:3.1.1.109]
D CPHO_07785 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CPHO_03460 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CPHO_11435 carbohydrate esterase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D CPHO_03095 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CPHO_03335 histidine phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D CPHO_11475 membrane protein K27842 E3.1.3.111; decaprenylphosphoryl-5-phosphoribose phosphatase [EC:3.1.3.111]
D CPHO_08695 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CPHO_07480 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D CPHO_06520 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D CPHO_00770 beta-lactamase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D CPHO_10850 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CPHO_05740 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CPHO_07915 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D CPHO_08130 GlcNAc-PI de-N-acetylase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D CPHO_11055 amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CPHO_11945 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CPHO_06025 cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
C 99981 Carbohydrate metabolism
D CPHO_06810 acetoin dehydrogenase K04768 acuC; acetoin utilization protein AcuC
D CPHO_07655 Fe-S osidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CPHO_07660 (4Fe-4S) protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CPHO_07665 lactate utilization protein B/C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CPHO_10375 formate dehydrogenase K02379 fdhD; FdhD protein
D CPHO_05910 nitrogen fixation protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D CPHO_07430 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D CPHO_07970 nitrite reductase K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D CPHO_06735 ribonucleotide reductase K03647 nrdI; protein involved in ribonucleotide reduction
D CPHO_02755 ribonucleotide reductase K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D CPHO_04270 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CPHO_09230 Resuscitation-promoting factor Rpf1 K21687 rpfA; resuscitation-promoting factor RpfA
D CPHO_08690 Resuscitation-promoting factor Rpf2 K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
D CPHO_09310 transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D CPHO_06285 feruloyl esterase K03932 lpqC; polyhydroxybutyrate depolymerase
D CPHO_02205 LpqC K03932 lpqC; polyhydroxybutyrate depolymerase
D CPHO_06720 oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D CPHO_08735 membrane protein K15977 K15977; putative oxidoreductase
D CPHO_07295 hypothetical protein K15977 K15977; putative oxidoreductase
D CPHO_11985 hypothetical protein K15977 K15977; putative oxidoreductase
D CPHO_02720 DoxX family membrane protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CPHO_01210 cold-shock protein K03704 cspA; cold shock protein
D CPHO_09225 cold-shock protein K03704 cspA; cold shock protein
D CPHO_08535 hypothetical protein K07741 antB; anti-repressor protein
D CPHO_04700 transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CPHO_02795 Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CPHO_03175 trigger factor K03545 tig; trigger factor
D CPHO_02560 Urease accessory protein UreE K03187 ureE; urease accessory protein
D CPHO_02565 urease accessory protein UreF K03188 ureF; urease accessory protein
D CPHO_02570 urease accessory protein UreG K03189 ureG; urease accessory protein
D CPHO_02575 urease accessory protein UreD K03190 ureD; urease accessory protein
D CPHO_09295 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein
D CPHO_02750 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D CPHO_04760 ATPase K07391 comM; magnesium chelatase family protein
D CPHO_01720 cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D CPHO_04755 endonuclease K07460 yraN; putative endonuclease
D CPHO_06065 exodeoxyribonuclease V subunit beta K07465 K07465; putative RecB family exonuclease
D CPHO_04765 DNA-binding protein K04096 smf; DNA processing protein
D CPHO_08365 hypothetical protein K06909 xtmB; phage terminase large subunit
D CPHO_05575 ATPase AAA K07478 ycaJ; putative ATPase
D CPHO_00200 transposase K07483 K07483; transposase
D CPHO_00215 transposase K07483 K07483; transposase
D CPHO_00855 transposase K07483 K07483; transposase
D CPHO_00870 transposase K07483 K07483; transposase
D CPHO_09015 transposase K07483 K07483; transposase
D CPHO_09030 transposase K07483 K07483; transposase
D CPHO_01855 transposase K07483 K07483; transposase
D CPHO_01900 transposase K07483 K07483; transposase
D CPHO_01460 transposase K07493 K07493; putative transposase
D CPHO_01870 transposase K07493 K07493; putative transposase
D CPHO_00850 transposase K07497 K07497; putative transposase
D CPHO_00875 transposase K07497 K07497; putative transposase
D CPHO_09010 transposase K07497 K07497; putative transposase
D CPHO_09020 transposase K07497 K07497; putative transposase
D CPHO_09025 transposase K07497 K07497; putative transposase
D CPHO_01895 transposase K07497 K07497; putative transposase
D CPHO_01925 transposase K07497 K07497; putative transposase
D CPHO_01945 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CPHO_05020 hypothetical protein K03969 pspA; phage shock protein A
D CPHO_00970 transcriptional regulator K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CPHO_02900 diguanylate cyclase K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CPHO_05555 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CPHO_11560 Na+/galactose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CPHO_09660 SNF family Na(+)-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CPHO_04590 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CPHO_03055 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CPHO_07380 hypothetical protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CPHO_03915 transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D CPHO_00795 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D CPHO_02065 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D CPHO_02070 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D CPHO_07925 GTP-binding protein TypA K06207 typA; GTP-binding protein
D CPHO_05940 hypothetical protein K07166 K07166; ACT domain-containing protein
D CPHO_03510 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CPHO_06940 histidine kinase K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D CPHO_10075 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D CPHO_02525 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein
D CPHO_02345 hypothetical protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CPHO_01205 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D CPHO_03120 hemin receptor K06886 glbN; hemoglobin
D CPHO_00830 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D CPHO_05890 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CPHO_05895 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D CPHO_01400 trehalose-binding protein K07058 K07058; membrane protein
D CPHO_09870 ribonuclease K07058 K07058; membrane protein
D CPHO_06145 hypothetical protein K07113 fxsA; UPF0716 protein FxsA
D CPHO_11720 hypothetical protein K07146 K07146; UPF0176 protein
D CPHO_11930 hypothetical protein K07146 K07146; UPF0176 protein
D CPHO_01215 membrane protein K03975 dedA; membrane-associated protein
D CPHO_11495 membrane protein K01421 yhgE; putative membrane protein
D CPHO_05530 membrane protein K01421 yhgE; putative membrane protein
D CPHO_00755 hypothetical protein K08972 K08972; putative membrane protein
D CPHO_06570 membrane protein K08974 K08974; putative membrane protein
D CPHO_10000 membrane protein K08981 K08981; putative membrane protein
D CPHO_06260 hypothetical protein K09858 K09858; SEC-C motif domain protein
D CPHO_01395 phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D CPHO_11375 hypothetical protein K06860 K06860; putative heme uptake system protein
D CPHO_03360 ankyrin K06867 K06867; uncharacterized protein
D CPHO_03475 hypothetical protein K06867 K06867; uncharacterized protein
D CPHO_02620 hypothetical protein K06975 K06975; uncharacterized protein
D CPHO_02405 deacetylase K06986 K06986; uncharacterized protein
D CPHO_00535 glyoxalase K06996 K06996; uncharacterized protein
D CPHO_05560 metalloprotease K07054 K07054; uncharacterized protein
D CPHO_05675 nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein
D CPHO_11980 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D CPHO_11075 membrane protein K07089 K07089; uncharacterized protein
D CPHO_00345 membrane protein K07090 K07090; uncharacterized protein
D CPHO_09145 hypothetical protein K07090 K07090; uncharacterized protein
D CPHO_06595 permease K07090 K07090; uncharacterized protein
D CPHO_09645 permease K07090 K07090; uncharacterized protein
D CPHO_02075 phosphatase K07093 K07093; uncharacterized protein
D CPHO_01070 metallophosphoesterase K07098 K07098; uncharacterized protein
D CPHO_00280 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D CPHO_09050 hypothetical protein K07112 K07112; uncharacterized protein
D CPHO_09060 membrane protein K07112 K07112; uncharacterized protein
D CPHO_00315 ammonia monooxygenase K07120 K07120; uncharacterized protein
D CPHO_00515 ATPase AAA K07133 K07133; uncharacterized protein
D CPHO_03800 Zn-ribbon protein K07164 K07164; uncharacterized protein
D CPHO_12405 hypothetical protein K08998 K08998; uncharacterized protein
D CPHO_06235 hypothetical protein K08999 K08999; uncharacterized protein
D CPHO_08165 septum formation initiator family protein K09009 K09009; uncharacterized protein
D CPHO_01075 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D CPHO_09390 hypothetical protein K09118 K09118; uncharacterized protein
D CPHO_07935 hypothetical protein K09146 K09146; uncharacterized protein
D CPHO_05935 hypothetical protein K09157 K09157; uncharacterized protein
D CPHO_10005 membrane protein K09167 K09167; uncharacterized protein
D CPHO_05000 hypothetical protein K09780 K09780; uncharacterized protein
D CPHO_07940 ABC transporter K09781 K09781; uncharacterized protein
D CPHO_06400 tetraacyldisaccharide 4'-kinase K09791 K09791; uncharacterized protein
D CPHO_04880 hypothetical protein K09861 K09861; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024