+D GENES KO #

  KEGG Orthology (KO) - Chlamydia pneumoniae J138

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cpj00010] D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D pfkA_1 pfkA_1; fructose-6-P phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D gapA gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D pgk pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D pyk pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D pdhA pdhA; pyruvate dehydrogenase alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D pdhB pdhB; pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D pdhC pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D pckA pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cpj00020] D sucA sucA; oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D sucB_1 sucB_1; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D sucB_2 sucB_2; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D sucD sucD; succinyl-CoA synthetase, alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D sucC sucC; succinyl-CoA synthetase, beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D sdhA sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D sdhB sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D sdhC sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D fumC fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D pckA pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D pdhA pdhA; pyruvate dehydrogenase alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D pdhB pdhB; pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D pdhC pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cpj00030] D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D zwf zwf; glucose-6-P dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D devB devB; glucose-6-P dehdyrogenase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D gnd gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D rpe rpe; ribulose-P epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D tktB_1 tktB_1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D tal tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D rpiA rpiA; ribose-5-P isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D pfkA_1 pfkA_1; fructose-6-P phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D rpe rpe; ribulose-P epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cpj00051] D mrsA mrsA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D pfkA_1 pfkA_1; fructose-6-P phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:cpj00500] D glgC glgC; glucose-1-P adenyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D glgA glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D glgB glgB; glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D glgP glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D malQ malQ; glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D glgX glgX; glycogen hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpj00520] D glmS glmS; glucosamine-fructose-6-P aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D pgm pgm; phosphoglucomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D glmU glmU; UDP-GlcNAc pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CPj0856 CPj0856; UDP-glucose pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D murA murA; UDP-N-acetylglucosamine transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D murB murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D mrsA mrsA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D glgC glgC; glucose-1-P adenyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cpj00620] D pdhA pdhA; pyruvate dehydrogenase alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D pdhB pdhB; pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D pdhC pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D pyk pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D accA accA; AcCoA carboxylase/transferase alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D accB accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D accC accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D accD accD; AcCoA carboxylase/transferase beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D fumC fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D pckA pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpj00630] D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D gcsH gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:cpj00640] D pdhA_pdhB pdhA_pdhB; (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D accA accA; AcCoA carboxylase/transferase alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D accB accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D accC accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D accD accD; AcCoA carboxylase/transferase beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D sucC sucC; succinyl-CoA synthetase, beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D sucD sucD; succinyl-CoA synthetase, alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D sdhA sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D sdhB sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D sdhC sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit C 00660 C5-Branched dibasic acid metabolism D sucC sucC; succinyl-CoA synthetase, beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D sucD sucD; succinyl-CoA synthetase, alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cpj00190] D sdhA sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D sdhB sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D sdhC sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D cydA cydA; cytochrome oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D cydB cydB; cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D atpA atpA; ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D atpB atpB; ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D atpD atpD; ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D atpE atpE; ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D atpI atpI; ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D atpK atpK; ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D ppa ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:cpj00710] D pgk pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D gapA gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D tktB_1 tktB_1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D rpiA rpiA; ribose-5-P isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D rpe rpe; ribulose-P epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D tal tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:cpj00720] D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D fumC fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D sdhA sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D sdhB sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D sdhC sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D sucD sucD; succinyl-CoA synthetase, alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D sucC sucC; succinyl-CoA synthetase, beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D accA accA; AcCoA carboxylase/transferase alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D accB accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D accC accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D accD accD; AcCoA carboxylase/transferase beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D folD folD; methylene tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] C 00680 Methane metabolism [PATH:cpj00680] D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:cpj00920] D cysQ cysQ; sulfite synthesis/biphosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D cysJ cysJ; sulfite reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cpj00061] D accA accA; AcCoA carboxylase/transferase alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D accB accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D accC accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D accD accD; AcCoA carboxylase/transferase beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D acpP acpP; acyl carrier protein K02078 acpP; acyl carrier protein D fabD fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D fabH fabH; oxoacyl carrier protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D fabF fabF; acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D fabG fabG; oxoacyl (carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D fabZ fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D fabI fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:cpj00074] D acpS acpS; acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D acpP acpP; acyl carrier protein K02078 acpP; acyl carrier protein D fabD fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cpj00561] D plsB plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D plsX plsX; FA/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CPj0921 CPj0921; snGlycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D plsC plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:cpj00564] D gpdA gpdA; glycerol-3-P dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D plsB plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CPj0921 CPj0921; snGlycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D plsC plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D cdsA cdsA; phosphatidate cytidylytransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D pssA pssA; glycerol-serine phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D psdD psdD; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D pgsA_2 pgsA_2; glycerol-3-P phosphatydyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D pgsA_1 pgsA_1; glycerol-3-P phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cpj00230] D surE surE; SurE-like acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CPj0374 CPj0374; CT056 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D guaB guaB; inosine 5'-monophosphase dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ndk ndk; nucleoside-2-P kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D yggV yggV; YggV family hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D guaA guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D gmk gmk; GMP kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D nrdA nrdA; ribonucleoside reductase, large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D nrdB nrdB; ribonucleoside reductase, small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D amn amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D adk adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:cpj00240] D CPj0608 CPj0608; uridine 5'-monophosphate synthase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D pyrH pyrH; UMP Kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D ndk ndk; nucleoside-2-P kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D maf maf; Maf-type protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D pyrG pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D cmk cmk; CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CPj0735 CPj0735; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D surE surE; SurE-like acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D dcd dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D nrdA nrdA; ribonucleoside reductase, large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D nrdB nrdB; ribonucleoside reductase, small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D tdk tdk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D dut dut; DutP nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpj00250] D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D glmS glmS; glucosamine-fructose-6-P aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:cpj00260] D lysC lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D asd asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D gcsH gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D pssA pssA; glycerol-serine phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:cpj00270] D yxjG_2 yxjG_2; hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPj0374 CPj0374; CT056 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D lysC lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D asd asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:cpj00280] D ldh ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D pdhA_pdhB pdhA_pdhB; (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpj00290] D ldh ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:cpj00300] D lysC lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D asd asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D dapA dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D dapB dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D dapF dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D aspC aspC; aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D murE murE; N-acetylmuramoylalanylglutamyl DAP ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D murF murF; muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cpj00310] D sucB_1 sucB_1; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D sucB_2 sucB_2; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:cpj00330] D CPj1032 CPj1032; CT373 hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D sucB_1 sucB_1; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D sucB_2 sucB_2; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpj00400] D aroG aroG; deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D aroB aroB; dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D aroE aroE; shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D aroL aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71] D aroA aroA; phosphoshikimate vinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D aroC aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D phnP phnP; metal dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:cpj00450] D yxjG_2 yxjG_2; hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D yfhO_1 yfhO_1; NifS-related aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D trxB trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D metG metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cpj00470] D murC_ddlA murC_ddlA; muramate-Ala ligase/D-Ala-D-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D murD murD; muramoylalanine-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D dapF dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:cpj00480] D pepA pepA; leucyl aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D gnd gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D zwf zwf; glucose-6-P dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:cpj00540] D lpxA lpxA; acyl-carrier UDP-GlcNAc O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D lpxC lpxC; myristoyl GlcNac deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D lpxD lpxD; UDP glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D lpxB lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D ycaH ycaH; ATPase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D kpsF kpsF; GutQ/KpsF family sugar-P isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D kdsA kdsA; KDO synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D kdsB kdsB; deoxyoctulonosic acid synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D gseA gseA; KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D htrB_2 htrB_2; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D htrB_1 htrB_1; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpj00541] D mrsA mrsA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D glmU glmU; UDP-GlcNAc pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cpj00550] D murA murA; UDP-N-acetylglucosamine transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D murB murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D murC_ddlA murC_ddlA; muramate-Ala ligase/D-Ala-D-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D murD murD; muramoylalanine-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D murE murE; N-acetylmuramoylalanylglutamyl DAP ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D murF murF; muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D yaeS yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D mraY mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D murG murG; peptidoglycan transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D pbp3 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D dacF dacF; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cpj00730] D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D tktB_2 tktB_2; transketolase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D adk adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cpj00740] D ribA_ribB ribA_ribB; GTP cyclohydratase/DHBP synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D ribD ribD; riboflavin deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ribE ribE; ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D ribC ribC; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D ribF ribF; FAD synthase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D ubiD ubiD; phenylacrylate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:cpj00760] D surE surE; SurE-like acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:cpj00770] D yacE yacE; phosphatase/kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D acpS acpS; acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:cpj00780] D fabF fabF; acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D fabG fabG; oxoacyl (carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D fabZ fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D fabI fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D bioF_1 bioF_1; oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D bioF_2 bioF_2; oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D bioA bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D bioD bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D bioB bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D birA birA; biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cpj00785] D lipA lipA; lipoate synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D lplA_1 lplA_1; lipoate protein ligase-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D lplA_2 lplA_2; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D pdhA pdhA; pyruvate dehydrogenase alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D pdhB pdhB; pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D pdhC pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D sucA sucA; oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D sucB_1 sucB_1; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D sucB_2 sucB_2; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D pdhA_pdhB pdhA_pdhB; (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D gcsH gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cpj00790] D folX folX; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D folP folP; dihydropteroate synthase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D folA folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CPj0760 CPj0760; CT611 hypothetical protein K22099 folC2; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D ribA_ribB ribA_ribB; GTP cyclohydratase/DHBP synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] C 00670 One carbon pool by folate [PATH:cpj00670] D folA folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D folD folD; methylene tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D fmt fmt; methionyl tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D ygfA ygfA; formyltetrahydrofolate cycloligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cpj00860] D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D hemA hemA; glutamyl tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D hemL hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D hemB hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D hemC hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CPj0522 CPj0522; CT433 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D hemE hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D hemN_2 hemN_2; coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D hemG hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D hemZ hemZ; ferrochetalase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpj00130] D ubiA ubiA; benzoate octaphenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D ubiD ubiD; phenylacrylate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D ubiE ubiE; ubiquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CPj0513 CPj0513; Fe-S oxidoreductase K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D CPj0911 CPj0911; Fe-S oxidoreductase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cpj00900] D tktB_2 tktB_2; transketolase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D yaeM yaeM; CT071 hypothetical protein K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D yacM yacM; sugar nucleotide phosphorylase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CPj0954 CPj0954; kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CPj0955 CPj0955; frame-shift with CPj0954 K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D ygbB ygbB; YgbB family hypothetical protein K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D gcpE gcpE; GcpE protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D lytB lytB; metalloprotease K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D ubiD ubiD; phenylacrylate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D ispA ispA; geranyl transtransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D yaeS yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D tktB_1 tktB_1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:cpj00261] D lysC lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D asd asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D dapA dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D dapB dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D fabD fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D fabG fabG; oxoacyl (carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D fabI fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D acpP acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D aroE aroE; shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D CPj0328 CPj0328; CT085 hypothetical protein K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D ubiD ubiD; phenylacrylate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cpj03020] D rpoB rpoB; RNA polymerase beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D rpoC rpoC; RNA polymerase beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D rpoA rpoA; RNA polymerase alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cpj03010] D rs1 rs1; S1 ribosomal protein K02945 RP-S1; small subunit ribosomal protein S1 D rs2 rs2; S2 ribosomal protein K02967 RP-S2; small subunit ribosomal protein S2 D rs3 rs3; S3 ribosomal protein K02982 RP-S3; small subunit ribosomal protein S3 D rs4 rs4; S4 ribosomal protein K02986 RP-S4; small subunit ribosomal protein S4 D rs5 rs5; S5 ribosomal protein K02988 RP-S5; small subunit ribosomal protein S5 D rs6 rs6; S6 ribosomal protein K02990 RP-S6; small subunit ribosomal protein S6 D rs7 rs7; S7 ribosomal protein K02992 RP-S7; small subunit ribosomal protein S7 D rs8 rs8; S8 ribosomal protein K02994 RP-S8; small subunit ribosomal protein S8 D rs9 rs9; S9 ribosomal protein K02996 RP-S9; small subunit ribosomal protein S9 D rs10 rs10; S10 ribosomal protein K02946 RP-S10; small subunit ribosomal protein S10 D rs11 rs11; S11 ribosomal protein K02948 RP-S11; small subunit ribosomal protein S11 D rs12 rs12; S12 ribosomal protein K02950 RP-S12; small subunit ribosomal protein S12 D rs13 rs13; S13 ribosomal protein K02952 RP-S13; small subunit ribosomal protein S13 D rs14 rs14; S14 ribosomal protein K02954 RP-S14; small subunit ribosomal protein S14 D rs15 rs15; S15 ribosomal protein K02956 RP-S15; small subunit ribosomal protein S15 D rs16 rs16; S16 ribosomal protein K02959 RP-S16; small subunit ribosomal protein S16 D rs17 rs17; S17 ribosomal protein K02961 RP-S17; small subunit ribosomal protein S17 D rs18 rs18; S18 ribosomal protein K02963 RP-S18; small subunit ribosomal protein S18 D rs19 rs19; S19 ribosomal protein K02965 RP-S19; small subunit ribosomal protein S19 D rs20 rs20; S20 ribosomal protein K02968 RP-S20; small subunit ribosomal protein S20 D rs21 rs21; S21 ribosomal protein K02970 RP-S21; small subunit ribosomal protein S21 D rl1 rl1; L1 ribosomal protein K02863 RP-L1; large subunit ribosomal protein L1 D rl2 rl2; L2 ribosomal protein K02886 RP-L2; large subunit ribosomal protein L2 D rl3 rl3; L3 ribosomal protein K02906 RP-L3; large subunit ribosomal protein L3 D rl4 rl4; L4 ribosomal protein K02926 RP-L4; large subunit ribosomal protein L4 D rl5 rl5; L5 ribosomal protein K02931 RP-L5; large subunit ribosomal protein L5 D rl6 rl6; L6 ribosomal protein K02933 RP-L6; large subunit ribosomal protein L6 D rl7 rl7; L7/L12 ribosomal protein K02935 RP-L7; large subunit ribosomal protein L7/L12 D rl9 rl9; L9 ribosomal protein K02939 RP-L9; large subunit ribosomal protein L9 D rl10 rl10; L10 ribosomal protein K02864 RP-L10; large subunit ribosomal protein L10 D rl11 rl11; L11 ribosomal protein K02867 RP-L11; large subunit ribosomal protein L11 D rl13 rl13; L13 ribosomal protein K02871 RP-L13; large subunit ribosomal protein L13 D rl14 rl14; L14 ribosomal protein K02874 RP-L14; large subunit ribosomal protein L14 D rl15 rl15; L15 ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15 D rl16 rl16; L16 ribosomal protein K02878 RP-L16; large subunit ribosomal protein L16 D rl17 rl17; L17 ribosomal protein K02879 RP-L17; large subunit ribosomal protein L17 D rl18 rl18; L18 ribosomal protein K02881 RP-L18; large subunit ribosomal protein L18 D rl19 rl19; L19 ribosomal protein K02884 RP-L19; large subunit ribosomal protein L19 D rl20 rl20; L20 ribosomal protein K02887 RP-L20; large subunit ribosomal protein L20 D rl21 rl21; L21 ribosomal protein K02888 RP-L21; large subunit ribosomal protein L21 D rl22 rl22; L22 ribosomal protein K02890 RP-L22; large subunit ribosomal protein L22 D rl23 rl23; L23 ribosomal protein K02892 RP-L23; large subunit ribosomal protein L23 D rl24 rl24; L24 ribosomal protein K02895 RP-L24; large subunit ribosomal protein L24 D ctc ctc; general stress protein K02897 RP-L25; large subunit ribosomal protein L25 D rl27 rl27; L27 ribosomal protein K02899 RP-L27; large subunit ribosomal protein L27 D rl28 rl28; L28 ribosomal protein K02902 RP-L28; large subunit ribosomal protein L28 D rl29 rl29; L29 ribosomal protein K02904 RP-L29; large subunit ribosomal protein L29 D rl31 rl31; L31 ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31 D rl32 rl32; L32 ribosomal protein K02911 RP-L32; large subunit ribosomal protein L32 D rl33 rl33; L33 ribosomal protein K02913 RP-L33; large subunit ribosomal protein L33 D rl34 rl34; L34 ribosomal protein K02914 RP-L34; large subunit ribosomal protein L34 D rl35 rl35; L35 ribosomal protein K02916 RP-L35; large subunit ribosomal protein L35 D rl36 rl36; L36 ribosomal protein K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpj00970] D tRNA-Ala-1 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-2 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Arg-2 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-1 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-4 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-3 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Asn tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asp tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Cys tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D tRNA-Gln tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Glu tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Gly-1 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-2 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-His tRNA-His; tRNA-His K14226 tRNA-His; tRNA His D tRNA-Ile tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Leu-3 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-5 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-4 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-2 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-1 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Lys tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Met-2 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-3 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-1 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Phe tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D tRNA-Pro-1 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Pro-2 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Ser-3 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-1 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Thr-1 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-2 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-3 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Trp tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D tRNA-Tyr tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D tRNA-Va tRNA-Va; tRNA-Va K14237 tRNA-Val; tRNA Val D tRNA-Val tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D gatA gatA; Glu tRNA Gln amidotransferae (A subunit) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D gatB gatB; (Pet112) Glu tRNA Gln amidotransferase (B subunit) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D gatC gatC; Glu-tRNA Gln amidotransferase (C subunit) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D alaS alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D aspS aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D glyQ glyQ; glycyl tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D thrS thrS; threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D serS serS; seryl tRNA synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D cysS cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D metG metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D fmt fmt; methionyl tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D valS valS; alyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D leuS leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ileS ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D lysS lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D argS argS; arginyl tRNA transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D proS proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D hisS hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D pheS pheS; phenylalanyl tRNA synthetase, alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D pheT pheT; phenylalanyl tRNA synthetase beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D tyrS tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D trpS trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cpj03060] D secY secY; translocase K03076 secY; preprotein translocase subunit SecY D secE secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE D CPj1066 CPj1066; hypothetical protein K03075 secG; preprotein translocase subunit SecG D secD_secF secD_secF; protein export K12257 secDF; SecD/SecF fusion protein D CPj0884 CPj0884; CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D secA_2 secA_2; protein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ffh ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ftsY ftsY; cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor D lepB lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D lspA lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cpj04122] D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ycbF ycbF; PP-loop superfamily ATPase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:cpj03018] D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D pnp pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D vacB vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1] D rho rho; transcription termination factor K03628 rho; transcription termination factor Rho D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D pcnB_2 pcnB_2; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D pcnB_1 pcnB_1; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cpj03030] D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D dnaB dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D dnaG dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein D rnhB_1 rnhB_1; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D rnhB_2 rnhB_2; rbonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cpj03410] D nth nth; enodnuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ung ung; uracil DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D mutY mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CPj0505 CPj0505; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D nfo nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D recJ recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cpj03420] D mfd mfd; transcription-repair coupling K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D uvrA uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D uvrB uvrB; exinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D uvrC uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C D uvrD uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cpj03430] D mutS mutS; DNA mismatch repair K03555 mutS; DNA mismatch repair protein MutS D mutL mutL; DNA mismatch repair K03572 mutL; DNA mismatch repair protein MutL D uvrD uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D xseA xseA; exodoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D recJ recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cpj03440] D recJ recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein D CPj0339 CPj0339; RecF-ABC superfamily ATPase K03629 recF; DNA replication and repair protein RecF D CPj0340 CPj0340; frame-shift with CPj0339 K03629 recF; DNA replication and repair protein RecF D CPj0589 CPj0589; CT470 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D recR recR; recombination protein K06187 recR; recombination protein RecR D recA recA; RecA recombination protein K03553 recA; recombination protein RecA D ruvA ruvA; holliday junction helicase K03550 ruvA; holliday junction DNA helicase RuvA D ruvB ruvB; holliday junction helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ruvC ruvC; crossover junction endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D recB recB; exodeoxyribonuclease V, beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D recC recC; exodeoxyribonuclease V, gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D recD_2 recD_2; exodeoxyribonuclease V, alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D recD_1 recD_1; exodeoxyribonuclease V (alpha subunit) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D priA priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus D ide ide; insulinase family/protease III K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cpj02010] D artJ artJ; arginine periplasmic binding protein K09996 artJ; arginine transport system substrate-binding protein D glnP glnP; ABC amino acid transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D glnQ glnQ; ABC amino acid transporter ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CPj0278 CPj0278; conserved outer membrane lipoprotein protein K02073 metQ; D-methionine transport system substrate-binding protein D CPj0279 CPj0279; possible ABC transporter permease protein K02072 metI; D-methionine transport system permease protein D dppF_1 dppF_1; dipeptide transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein D oppA_1 oppA_1; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D oppA_2 oppA_2; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D oppB_1 oppB_1; oligopeptide permease K15581 oppB; oligopeptide transport system permease protein D oppC_1 oppC_1; oligopeptide permease K15582 oppC; oligopeptide transport system permease protein D oppF oppF; oligopeptide transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D oppD oppD; oligopeptide transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CPj0541 CPj0541; solute binding protein K09815 znuA; zinc transport system substrate-binding protein D CPj0543 CPj0543; metal transport protein K09816 znuB; zinc transport system permease protein D CPj0542 CPj0542; ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D ytgA ytgA; solute protein binding family K11707 troA; manganese/zinc/iron transport system substrate-binding protein D ytgC ytgC; integral membrane protein K11708 troC; manganese/zinc/iron transport system permease protein D ytgD ytgD; integral membrane protein K11709 troD; manganese/zinc/iron transport system permease protein D ytgB_1 ytgB_1; rRNA methylase K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CPj0249 CPj0249; CT151 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D ycfV ycfV; ABC transporter ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CPj0996 CPj0996; CT839 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D CPj0995 CPj0995; CT838 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D yhbG yhbG; ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:cpj02060] D ptsI ptsI; Pts pep phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D ptsH ptsH; Pts phosphocarrier protein hpr K02784 ptsH; phosphocarrier protein HPr D ptsN_1 ptsN_1; Pts IIA Protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D ptsN_2 ptsN_2; Pts IIA protein with HTH DNA-Binding domain K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cpj03070] D yscC yscC; YopC/Gen secretion protein D K03219 yscC; type III secretion protein C D lcrE lcrE; low calcium response E K04058 yscW; type III secretion protein W D yscJ yscJ; Yop translocation J K03222 yscJ; type III secretion protein J D yscR yscR; Yop translocation R K03226 yscR; type III secretion protein R D yscS yscS; YopS translocation protein K03227 yscS; type III secretion protein S D yscT yscT; YopT tranlocation T K03228 yscT; type III secretion protein T D yscU yscU; Yop translocation protein U K03229 yscU; type III secretion protein U D lcrD lcrD; low calcium response D K03230 yscV; type III secretion protein V D yscN yscN; YopN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D yscL yscL; Yop translocation L K03223 yscL; type III secretion protein L D gspD gspD; general secretion protein D K02453 gspD; general secretion pathway protein D D gspF gspF; general secretion protein F K02455 gspF; general secretion pathway protein F D gspE gspE; genral secretion protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D secD_secF secD_secF; protein export K12257 secDF; SecD/SecF fusion protein D secE secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE D CPj1066 CPj1066; hypothetical protein K03075 secG; preprotein translocase subunit SecG D secY secY; translocase K03076 secY; preprotein translocase subunit SecY D CPj0884 CPj0884; CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D secA_2 secA_2; protein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ftsY ftsY; cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor D ffh ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:cpj02020] D htrA htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D rpsD rpsD; sigma-28/WhiG family K02405 fliA; RNA polymerase sigma factor FliA D dnaA_1 dnaA_1; replication initiation factor K02313 dnaA; chromosomal replication initiator protein D dnaA_2 dnaA_2; replication initiation factor K02313 dnaA; chromosomal replication initiator protein D uhpC uhpC; hexosphosphate transport K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D atoS atoS; 2-component sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D atoC atoC; 2-component regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D rpoN rpoN; RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D cydA cydA; cytochrome oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D cydB cydB; cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cpj02024] D xasA xasA; amino acid transporter K20265 gadC; glutamate:GABA antiporter D ribD ribD; riboflavin deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D oppA_1 oppA_1; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D oppA_2 oppA_2; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D oppB_1 oppB_1; oligopeptide permease K15581 oppB; oligopeptide transport system permease protein D oppC_1 oppC_1; oligopeptide permease K15582 oppC; oligopeptide transport system permease protein D oppF oppF; oligopeptide transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D oppD oppD; oligopeptide transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D oppA_3 oppA_3; oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D oppA_4 oppA_4; oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D oppA_5 oppA_5; oligopeptide binding lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D oppB_2 oppB_2; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D oppC_2 oppC_2; oligopeptide permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D dppD dppD; ABC ATPase dipeptide transport K02031 ddpD; peptide/nickel transport system ATP-binding protein D dppF_2 dppF_2; ABC ATPase dipeptide transport K02032 ddpF; peptide/nickel transport system ATP-binding protein D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D secD_secF secD_secF; protein export K12257 secDF; SecD/SecF fusion protein D secE secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE D CPj1066 CPj1066; hypothetical protein K03075 secG; preprotein translocase subunit SecG D secY secY; translocase K03076 secY; preprotein translocase subunit SecY D CPj0884 CPj0884; CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D secA_2 secA_2; protein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ftsY ftsY; cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor D ffh ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D fliN fliN; flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:cpj02040] D fliF fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D CPj0859 CPj0859; CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH D fliI fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D fliN fliN; flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D flhA flhA; flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA D rpoD rpoD; RNA polymerase sigma-66 K03086 rpoD; RNA polymerase primary sigma factor D rpoN rpoN; RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D rpsD rpsD; sigma-28/WhiG family K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cpj01501] D oppA_1 oppA_1; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D oppA_2 oppA_2; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D oppB_1 oppB_1; oligopeptide permease K15581 oppB; oligopeptide transport system permease protein D oppC_1 oppC_1; oligopeptide permease K15582 oppC; oligopeptide transport system permease protein D oppF oppF; oligopeptide transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D oppD oppD; oligopeptide transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D pbp3 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cpj01502] D murC_ddlA murC_ddlA; muramate-Ala ligase/D-Ala-D-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D murF murF; muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D mraY mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D murG murG; peptidoglycan transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpj01503] D amiA amiA; N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D htrA htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D lpxA lpxA; acyl-carrier UDP-GlcNAc O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cpj01000] C 01001 Protein kinases [BR:cpj01001] D CPj0095 CPj0095; S/T protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D rsbW rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D atoS atoS; 2-component sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cpj01009] D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPj0397 CPj0397; PP2C phosphatase family K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cpj01002] D lspA lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D guaA guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D glmS glmS; glucosamine-fructose-6-P aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPj0400 CPj0400; CT254 hypothetical protein K07052 K07052; CAAX protease family protein D pepF pepF; oligopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D ide ide; insulinase family/protease III K01408 IDE; insulysin [EC:3.4.24.56] D CPj0981 CPj0981; zinc metalloprotease K06972 PITRM1; presequence protease [EC:3.4.24.-] D pepA pepA; leucyl aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D map map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D pepP pepP; aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D ftsH ftsH; ATP-dependent zinc protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D yaeL yaeL; metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D htrA htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D dacF dacF; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D clpP_1 clpP_1; CLP protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D clpP_2 clpP_2; CLP protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D lon lon; Lon ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D lepB lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D tsp tsp; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:cpj01003] D glgA glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpj01005] D lpxA lpxA; acyl-carrier UDP-GlcNAc O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D lpxB lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D lpxC lpxC; myristoyl GlcNac deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D lpxD lpxD; UDP glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D ycaH ycaH; ATPase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D htrB_2 htrB_2; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D htrB_1 htrB_1; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D gseA gseA; KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D kdsA kdsA; KDO synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D kdsB kdsB; deoxyoctulonosic acid synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D kpsF kpsF; GutQ/KpsF family sugar-P isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpj01011] D murA murA; UDP-N-acetylglucosamine transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D murB murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D murC_ddlA murC_ddlA; muramate-Ala ligase/D-Ala-D-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D murD murD; muramoylalanine-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D murE murE; N-acetylmuramoylalanylglutamyl DAP ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D mraY mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D murG murG; peptidoglycan transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D mviN mviN; integral membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D pbp3 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D dacF dacF; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D amiA amiA; N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cpj01004] D fabD fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D fabH fabH; oxoacyl carrier protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D fabF fabF; acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D fabG fabG; oxoacyl (carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D fabZ fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D fabI fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D plsB plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D plsX plsX; FA/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CPj0921 CPj0921; snGlycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D plsC plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cpj01006] D ispA ispA; geranyl transtransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D yaeS yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D miaA miaA; tRNA pyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ubiA ubiA; benzoate octaphenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:cpj01007] D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D tyrS tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D trpS trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D cysS cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D argS argS; arginyl tRNA transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D metG metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ileS ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D valS valS; alyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D leuS leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D lysS lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D aspS aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D hisS hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D serS serS; seryl tRNA synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D proS proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D thrS thrS; threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D alaS alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D pheS pheS; phenylalanyl tRNA synthetase, alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D pheT pheT; phenylalanyl tRNA synthetase beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D aspC aspC; aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D bioF_1 bioF_1; oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D bioF_2 bioF_2; oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D bioA bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D hemL hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cpj00194] B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cpj03000] D birA birA; biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D parB parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D argR argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D hrcA hrcA; HTH transcriptional repressor K03705 hrcA; heat-inducible transcriptional repressor D yqgE yqgE; YqgE hypothetical protein K07735 algH; putative transcriptional regulator D dksA dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D CPj0533 CPj0533; CT406 hypothetical protein K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:cpj03021] D rpoA rpoA; RNA polymerase alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D rpoB rpoB; RNA polymerase beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D rpoC rpoC; RNA polymerase beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D rpoD rpoD; RNA polymerase sigma-66 K03086 rpoD; RNA polymerase primary sigma factor D rpoN rpoN; RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D rpsD rpsD; sigma-28/WhiG family K02405 fliA; RNA polymerase sigma factor FliA D nusA nusA; N utilization protein A K02600 nusA; transcription termination/antitermination protein NusA D CPj0989 CPj0989; CT832 hypothetical protein K03625 nusB; transcription antitermination protein NusB D nusG nusG; transcriptional antitermination K02601 nusG; transcription termination/antitermination protein NusG D rbsU rbsU; sigma regulatory family protein - PP2C phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D rsbV_1 rsbV_1; sigma regulatory factor K04749 rsbV; anti-sigma B factor antagonist D rsbW rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D dksA dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D rho rho; transcription termination factor K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cpj03019] D cafE cafE; axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-] D rnc rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D vacB vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1] D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D pnp pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D rho rho; transcription termination factor K03628 rho; transcription termination factor Rho D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D pcnB_2 pcnB_2; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D pcnB_1 pcnB_1; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:cpj03011] D rs1 rs1; S1 ribosomal protein K02945 RP-S1; small subunit ribosomal protein S1 D rs2 rs2; S2 ribosomal protein K02967 RP-S2; small subunit ribosomal protein S2 D rs3 rs3; S3 ribosomal protein K02982 RP-S3; small subunit ribosomal protein S3 D rs4 rs4; S4 ribosomal protein K02986 RP-S4; small subunit ribosomal protein S4 D rs5 rs5; S5 ribosomal protein K02988 RP-S5; small subunit ribosomal protein S5 D rs6 rs6; S6 ribosomal protein K02990 RP-S6; small subunit ribosomal protein S6 D rs7 rs7; S7 ribosomal protein K02992 RP-S7; small subunit ribosomal protein S7 D rs8 rs8; S8 ribosomal protein K02994 RP-S8; small subunit ribosomal protein S8 D rs9 rs9; S9 ribosomal protein K02996 RP-S9; small subunit ribosomal protein S9 D rs10 rs10; S10 ribosomal protein K02946 RP-S10; small subunit ribosomal protein S10 D rs11 rs11; S11 ribosomal protein K02948 RP-S11; small subunit ribosomal protein S11 D rs12 rs12; S12 ribosomal protein K02950 RP-S12; small subunit ribosomal protein S12 D rs13 rs13; S13 ribosomal protein K02952 RP-S13; small subunit ribosomal protein S13 D rs14 rs14; S14 ribosomal protein K02954 RP-S14; small subunit ribosomal protein S14 D rs15 rs15; S15 ribosomal protein K02956 RP-S15; small subunit ribosomal protein S15 D rs16 rs16; S16 ribosomal protein K02959 RP-S16; small subunit ribosomal protein S16 D rs17 rs17; S17 ribosomal protein K02961 RP-S17; small subunit ribosomal protein S17 D rs18 rs18; S18 ribosomal protein K02963 RP-S18; small subunit ribosomal protein S18 D rs19 rs19; S19 ribosomal protein K02965 RP-S19; small subunit ribosomal protein S19 D rs20 rs20; S20 ribosomal protein K02968 RP-S20; small subunit ribosomal protein S20 D rs21 rs21; S21 ribosomal protein K02970 RP-S21; small subunit ribosomal protein S21 D rl1 rl1; L1 ribosomal protein K02863 RP-L1; large subunit ribosomal protein L1 D rl2 rl2; L2 ribosomal protein K02886 RP-L2; large subunit ribosomal protein L2 D rl3 rl3; L3 ribosomal protein K02906 RP-L3; large subunit ribosomal protein L3 D rl4 rl4; L4 ribosomal protein K02926 RP-L4; large subunit ribosomal protein L4 D rl5 rl5; L5 ribosomal protein K02931 RP-L5; large subunit ribosomal protein L5 D rl6 rl6; L6 ribosomal protein K02933 RP-L6; large subunit ribosomal protein L6 D rl9 rl9; L9 ribosomal protein K02939 RP-L9; large subunit ribosomal protein L9 D rl10 rl10; L10 ribosomal protein K02864 RP-L10; large subunit ribosomal protein L10 D rl11 rl11; L11 ribosomal protein K02867 RP-L11; large subunit ribosomal protein L11 D rl7 rl7; L7/L12 ribosomal protein K02935 RP-L7; large subunit ribosomal protein L7/L12 D rl13 rl13; L13 ribosomal protein K02871 RP-L13; large subunit ribosomal protein L13 D rl14 rl14; L14 ribosomal protein K02874 RP-L14; large subunit ribosomal protein L14 D rl15 rl15; L15 ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15 D rl16 rl16; L16 ribosomal protein K02878 RP-L16; large subunit ribosomal protein L16 D rl17 rl17; L17 ribosomal protein K02879 RP-L17; large subunit ribosomal protein L17 D rl18 rl18; L18 ribosomal protein K02881 RP-L18; large subunit ribosomal protein L18 D rl19 rl19; L19 ribosomal protein K02884 RP-L19; large subunit ribosomal protein L19 D rl20 rl20; L20 ribosomal protein K02887 RP-L20; large subunit ribosomal protein L20 D rl21 rl21; L21 ribosomal protein K02888 RP-L21; large subunit ribosomal protein L21 D rl22 rl22; L22 ribosomal protein K02890 RP-L22; large subunit ribosomal protein L22 D rl23 rl23; L23 ribosomal protein K02892 RP-L23; large subunit ribosomal protein L23 D rl24 rl24; L24 ribosomal protein K02895 RP-L24; large subunit ribosomal protein L24 D rl27 rl27; L27 ribosomal protein K02899 RP-L27; large subunit ribosomal protein L27 D rl28 rl28; L28 ribosomal protein K02902 RP-L28; large subunit ribosomal protein L28 D rl29 rl29; L29 ribosomal protein K02904 RP-L29; large subunit ribosomal protein L29 D rl31 rl31; L31 ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31 D rl32 rl32; L32 ribosomal protein K02911 RP-L32; large subunit ribosomal protein L32 D rl33 rl33; L33 ribosomal protein K02913 RP-L33; large subunit ribosomal protein L33 D rl34 rl34; L34 ribosomal protein K02914 RP-L34; large subunit ribosomal protein L34 D rl35 rl35; L35 ribosomal protein K02916 RP-L35; large subunit ribosomal protein L35 D rl36 rl36; L36 ribosomal protein K02919 RP-L36; large subunit ribosomal protein L36 D ctc ctc; general stress protein K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:cpj03009] D rnc rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D yhbZ yhbZ; GTP binding protein K03979 obgE; GTPase [EC:3.6.5.-] D dksA dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D nusA nusA; N utilization protein A K02600 nusA; transcription termination/antitermination protein NusA D CPj0989 CPj0989; CT832 hypothetical protein K03625 nusB; transcription antitermination protein NusB D nusG nusG; transcriptional antitermination K02601 nusG; transcription termination/antitermination protein NusG D kgsA kgsA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D yhhF yhhF; methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D yabC_2 yabC_2; SAM-dependent methytransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D yabC_1 yabC_1; SAM-dependent methytransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CPj0531 CPj0531; SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D yjbC yjbC; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D yceC yceC; pseudouridine synthetase family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D sfhB sfhB; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CPj0251 CPj0251; conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D cafE cafE; axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-] D yggF yggF; YggF family hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D yphC yphC; GTPase/GTP-binding protein K03977 engA; GTPase D hflX hflX; GTP binding protein K03665 hflX; GTPase D ywlC ywlC; SuA5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D rbfA rbfA; ribosome binding factor A K02834 rbfA; ribosome-binding factor A D ybeB ybeB; IojAP superfamily ortholog K09710 ybeB; ribosome-associated protein D CPj0509 CPj0509; metalloenzyme K07042 ybeY; probable rRNA maturation factor D ychF ychF; GTP binding protein K06942 ychF; ribosome-binding ATPase D CPj0960 CPj0960; CT809 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cpj03016] D atsA atsA; sulphohydrolase/glycosulfatase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D proS proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ileS ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D leuS leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D metG metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D argS argS; arginyl tRNA transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D lysS lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D aspS aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D alaS alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D thrS thrS; threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D serS serS; seryl tRNA synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D cysS cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D valS valS; alyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D hisS hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D pheS pheS; phenylalanyl tRNA synthetase, alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D pheT pheT; phenylalanyl tRNA synthetase beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D tyrS tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D trpS trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ycfF ycfF; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D yggH yggH; rRNA methylase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D truA truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D truB truB; tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ywlC ywlC; SuA5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D miaA miaA; tRNA pyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D thdF thdF; thiophene/furan oxidation protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D gidA gidA; FAD-dependent oxidoreductase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D cysQ cysQ; sulfite synthesis/biphosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D rnpA rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D glyQ glyQ; glycyl tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D yfhC yfhC; cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D yqeV yqeV; hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D trmD trmD; tRNA (guanine N-1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D spoU_2 spoU_2; rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D spoU_1 spoU_1; rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D ycbF ycbF; PP-loop superfamily ATPase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D tgt tgt; queuine tRNA ribosyl transferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D mesJ mesJ; PP-loop superfamily ATPase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D gcp_2 gcp_2; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D yjeE yjeE; YjeE hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D vacB vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1] D pnp pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cpj03012] D infB infB; initiation factor-2 K02519 infB; translation initiation factor IF-2 D infC infC; initiation factor 3 K02520 infC; translation initiation factor IF-3 D tsf tsf; elongation factor TS K02357 tsf; elongation factor Ts D tufA tufA; elongation factor Tu K02358 tuf; elongation factor Tu D fusA fusA; elongation factor G K02355 fusA; elongation factor G D pfrA pfrA; peptide chain releasing factor K02835 prfA; peptide chain release factor 1 D rrf rrf; ribosome releasing factor K02838 frr; ribosome recycling factor D hemK hemK; A/G specific methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D pth pth; peptidyl tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D infA infA; initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D efp_1 efp_1; elongation factor P K02356 efp; elongation factor P D efp_2 efp_2; elongation factor P K02356 efp; elongation factor P D CPj0576_1 CPj0576_1; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:cpj03110] D clpB clpB; Clp protease ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D clpC clpC; ClpC protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D clpX clpX; CLP protease ATPase K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dnaJ dnaJ; heat shock protein J K03686 dnaJ; molecular chaperone DnaJ D grpE grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE D groES groES; 10 KDa chaperonin K04078 groES; chaperonin GroES D htrA htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D ftsH ftsH; ATP-dependent zinc protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D trxA trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cpj04131] D ndk ndk; nucleoside-2-P kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D gapA gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D pyk pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:cpj03032] D himD himD; integration host factor alpha K05788 ihfB; integration host factor subunit beta D dnaA_1 dnaA_1; replication initiation factor K02313 dnaA; chromosomal replication initiator protein D dnaA_2 dnaA_2; replication initiation factor K02313 dnaA; chromosomal replication initiator protein D dnaB dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D dnaG dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D rnhB_1 rnhB_1; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D rnhB_2 rnhB_2; rbonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D gyrA_1 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D gyrA_2 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D gyrB_1 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D gyrB_2 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D topA topA; DNA topoisomerase I-fused to SWI domain K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cpj03036] D rnc rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D himD himD; integration host factor alpha K05788 ihfB; integration host factor subunit beta D dnaA_1 dnaA_1; replication initiation factor K02313 dnaA; chromosomal replication initiator protein D dnaA_2 dnaA_2; replication initiation factor K02313 dnaA; chromosomal replication initiator protein D pbp3 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ftsK ftsK; cell division protein ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D ftsW ftsW; cell division protein ftsW K03588 ftsW; cell division protein FtsW D amiA amiA; N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D mreB mreB; rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins D rodA rodA; rod shape protein K05837 rodA; rod shape determining protein RodA D minD minD; chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D parB parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D gidA gidA; FAD-dependent oxidoreductase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D xerC xerC; integrase/recombinase K03733 xerC; integrase/recombinase XerC D xerD xerD; integrase/recombinase K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:cpj03400] D ada ada; methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D ung ung; uracil DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CPj0505 CPj0505; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D mutY mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D nth nth; enodnuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D dut dut; DutP nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D nfo nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D recJ recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D uvrA uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D uvrB uvrB; exinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D uvrC uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C D uvrD uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D rpoB rpoB; RNA polymerase beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D rpoC rpoC; RNA polymerase beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D rpoA rpoA; RNA polymerase alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D mfd mfd; transcription-repair coupling K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D mutS mutS; DNA mismatch repair K03555 mutS; DNA mismatch repair protein MutS D mutL mutL; DNA mismatch repair K03572 mutL; DNA mismatch repair protein MutL D xseA xseA; exodoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein D recB recB; exodeoxyribonuclease V, beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D recC recC; exodeoxyribonuclease V, gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D recD_2 recD_2; exodeoxyribonuclease V, alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D recD_1 recD_1; exodeoxyribonuclease V (alpha subunit) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D recA recA; RecA recombination protein K03553 recA; recombination protein RecA D ruvA ruvA; holliday junction helicase K03550 ruvA; holliday junction DNA helicase RuvA D ruvB ruvB; holliday junction helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ruvC ruvC; crossover junction endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D priA priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D sms sms; Sms protein K04485 radA; DNA repair protein RadA/Sms D CPj0339 CPj0339; RecF-ABC superfamily ATPase K03629 recF; DNA replication and repair protein RecF D CPj0340 CPj0340; frame-shift with CPj0339 K03629 recF; DNA replication and repair protein RecF D CPj0589 CPj0589; CT470 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D recR recR; recombination protein K06187 recR; recombination protein RecR D gyrA_1 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D gyrA_2 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D gyrB_1 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D gyrB_2 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D topA topA; DNA topoisomerase I-fused to SWI domain K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D himD himD; integration host factor alpha K05788 ihfB; integration host factor subunit beta D nrdA nrdA; ribonucleoside reductase, large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D nrdB nrdB; ribonucleoside reductase, small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cpj03029] D infB infB; initiation factor-2 K02519 infB; translation initiation factor IF-2 D infC infC; initiation factor 3 K02520 infC; translation initiation factor IF-3 D tsf tsf; elongation factor TS K02357 tsf; elongation factor Ts D tufA tufA; elongation factor Tu K02358 tuf; elongation factor Tu D fusA fusA; elongation factor G K02355 fusA; elongation factor G D tyrS tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D leuS leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D aspS aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D argS argS; arginyl tRNA transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D gatA gatA; Glu tRNA Gln amidotransferae (A subunit) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D gatB gatB; (Pet112) Glu tRNA Gln amidotransferase (B subunit) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D gatC gatC; Glu-tRNA Gln amidotransferase (C subunit) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein D yaeT yaeT; omp85 analog K07277 SAM50; outer membrane protein insertion porin family D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK D grpE grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D groES groES; 10 KDa chaperonin K04078 groES; chaperonin GroES D dnaJ dnaJ; heat shock protein J K03686 dnaJ; molecular chaperone DnaJ D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cpj02000] D yzeB yzeB; ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D tauB tauB; ABC transport ATPase (Nitrate/Fe) K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D artJ artJ; arginine periplasmic binding protein K09996 artJ; arginine transport system substrate-binding protein D glnP glnP; ABC amino acid transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D glnQ glnQ; ABC amino acid transporter ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CPj0278 CPj0278; conserved outer membrane lipoprotein protein K02073 metQ; D-methionine transport system substrate-binding protein D CPj0279 CPj0279; possible ABC transporter permease protein K02072 metI; D-methionine transport system permease protein D dppF_1 dppF_1; dipeptide transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein D fliY fliY; glutamine binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D oppA_1 oppA_1; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D oppA_2 oppA_2; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D oppB_1 oppB_1; oligopeptide permease K15581 oppB; oligopeptide transport system permease protein D oppC_1 oppC_1; oligopeptide permease K15582 oppC; oligopeptide transport system permease protein D oppF oppF; oligopeptide transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D oppD oppD; oligopeptide transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D oppA_3 oppA_3; oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D oppA_4 oppA_4; oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D oppA_5 oppA_5; oligopeptide binding lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D oppB_2 oppB_2; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D oppC_2 oppC_2; oligopeptide permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D dppD dppD; ABC ATPase dipeptide transport K02031 ddpD; peptide/nickel transport system ATP-binding protein D dppF_2 dppF_2; ABC ATPase dipeptide transport K02032 ddpF; peptide/nickel transport system ATP-binding protein D CPj0541 CPj0541; solute binding protein K09815 znuA; zinc transport system substrate-binding protein D CPj0543 CPj0543; metal transport protein K09816 znuB; zinc transport system permease protein D CPj0542 CPj0542; ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D ytgA ytgA; solute protein binding family K11707 troA; manganese/zinc/iron transport system substrate-binding protein D ytgC ytgC; integral membrane protein K11708 troC; manganese/zinc/iron transport system permease protein D ytgD ytgD; integral membrane protein K11709 troD; manganese/zinc/iron transport system permease protein D ytgB_1 ytgB_1; rRNA methylase K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CPj0996 CPj0996; CT839 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D CPj0995 CPj0995; CT838 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D yhbG yhbG; ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CPj0249 CPj0249; CT151 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D ycfV ycfV; ABC transporter ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D abcX abcX; ABC transporter ATPase K09013 sufC; Fe-S cluster assembly ATP-binding protein D uhpC uhpC; hexosphosphate transport K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D ptsI ptsI; Pts pep phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D ptsH ptsH; Pts phosphocarrier protein hpr K02784 ptsH; phosphocarrier protein HPr D ptsN_1 ptsN_1; Pts IIA Protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D ptsN_2 ptsN_2; Pts IIA protein with HTH DNA-Binding domain K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D mgtE mgtE; Mg++ transporter K06213 mgtE; magnesium transporter D exbD exbD; biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D exbB exbB; macromolecule transporter K03562 tolQ; biopolymer transport protein TolQ D CPj0395 CPj0395; CT257 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D tlyC_2 tlyC_2; CBS domains (hemolysin homolog) K03699 tlyC; magnesium and cobalt exporter, CNNM family D tlyC_1 tlyC_1; CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ompA ompA; major outer membrane protein K03162 ompA; major outer membrane protein D ompB ompB; outer membrane protein B K08719 K08719; outer membrane protein B D yaeT yaeT; omp85 analog K07277 SAM50; outer membrane protein insertion porin family D arcD arcD; arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D xasA xasA; amino acid transporter K20265 gadC; glutamate:GABA antiporter D tyrP_1 tyrP_1; tyrosine transport K03834 tyrP; tyrosine-specific transport protein D ychM ychM; sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D mviN mviN; integral membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D CPj1045 CPj1045; conserved hypothetical bacterial membrane protein K09125 yhhQ; queuosine precursor transporter D ypdP ypdP; YpdP hypothetical protein K09125 yhhQ; queuosine precursor transporter D ftsW ftsW; cell division protein ftsW K03588 ftsW; cell division protein FtsW D pal pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D tolB tolB; macromolecule transporter K03641 tolB; TolB protein C 02044 Secretion system [BR:cpj02044] D gspD gspD; general secretion protein D K02453 gspD; general secretion pathway protein D D gspE gspE; genral secretion protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D gspF gspF; general secretion protein F K02455 gspF; general secretion pathway protein F D CPj0767 CPj0767; CT645 hypothetical protein K02221 yggT; YggT family protein D yscC yscC; YopC/Gen secretion protein D K03219 yscC; type III secretion protein C D yscJ yscJ; Yop translocation J K03222 yscJ; type III secretion protein J D yscL yscL; Yop translocation L K03223 yscL; type III secretion protein L D yscN yscN; YopN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D yscR yscR; Yop translocation R K03226 yscR; type III secretion protein R D yscS yscS; YopS translocation protein K03227 yscS; type III secretion protein S D yscT yscT; YopT tranlocation T K03228 yscT; type III secretion protein T D yscU yscU; Yop translocation protein U K03229 yscU; type III secretion protein U D lcrD lcrD; low calcium response D K03230 yscV; type III secretion protein V D lcrE lcrE; low calcium response E K04058 yscW; type III secretion protein W D flhA flhA; flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA D fliF fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D CPj0859 CPj0859; CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH D fliI fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D fliN fliN; flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D secA_2 secA_2; protein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D secD_secF secD_secF; protein export K12257 secDF; SecD/SecF fusion protein D secE secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE D CPj1066 CPj1066; hypothetical protein K03075 secG; preprotein translocase subunit SecG D secY secY; translocase K03076 secY; preprotein translocase subunit SecY D ffh ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ftsY ftsY; cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor D CPj0884 CPj0884; CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cpj02042] D CPj0395 CPj0395; CT257 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D tlyC_2 tlyC_2; CBS domains (hemolysin homolog) K03699 tlyC; magnesium and cobalt exporter, CNNM family D tlyC_1 tlyC_1; CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:cpj02022] D atoS atoS; 2-component sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D atoC atoC; 2-component regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:cpj02035] D CPj0859 CPj0859; CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH D fliI fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D flhA flhA; flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA D fliN fliN; flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D fliF fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D rpsD rpsD; sigma-28/WhiG family K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cpj04812] D mreB mreB; rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins D minD minD; chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D parB parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cpj04147] D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D gapA gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D pgk pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D pyk pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ahpC ahpC; thio-specific antioxidant (TSA) peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D guaB guaB; inosine 5'-monophosphase dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D tufA tufA; elongation factor Tu K02358 tuf; elongation factor Tu D ycfF ycfF; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D adk adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D glgB glgB; glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D hemB hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D zwf zwf; glucose-6-P dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cpj02048] D mreB mreB; rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cpj03100] D tRNA-Ala-1 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-2 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Arg-2 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-1 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-4 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-3 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Asn tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asp tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Cys tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D tRNA-Gln tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Glu tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Gly-1 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-2 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-His tRNA-His; tRNA-His K14226 tRNA-His; tRNA His D tRNA-Ile tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Leu-3 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-5 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-4 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-2 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-1 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Lys tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Met-2 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-3 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-1 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Phe tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D tRNA-Pro-1 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Pro-2 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Ser-3 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-1 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Thr-1 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-2 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-3 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Trp tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D tRNA-Tyr tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D tRNA-Va tRNA-Va; tRNA-Va K14237 tRNA-Val; tRNA Val D tRNA-Val tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CPj0761 CPj0761; CT610 hypothetical protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D CPj0926 CPj0926; thioredoxin disulfide isomerase K01829 dsbH; disulfide reductase [EC:1.8.-.-] D cutE cutE; apolipoprotein N-acetyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D lgt lgt; prolipoprotein diacylglycerol transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D yojL yojL; YojL hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D ybbP ybbP; YbbP family hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D karG karG; arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D yqfF yqfF; conserved hypothetical inner membrane protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D yabD yabD; PHP superfamily (urease/pyrimidinase) hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D def def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D mip mip; FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D nqrA nqrA; ubiquinone oxidoreductase, alpha K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D nqr2 nqr2; NADH (ubiquinone) dehydrogenase K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D nqr3 nqr3; NADH (ubiquinone) oxidoreductase, gamma K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D nqr4 nqr4; NADH (ubiquinone) reductase 4 K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D nqr5 nqr5; NADH (ubiquinone) reductase 5 K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D nqr6 nqr6; phenolhydrolase/NADH ubiquinone oxidoreductase 6 K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D zntA zntA; metal transport P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CPj0861 CPj0861; NifU-related protein K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D CPj0271 CPj0271; lysophospholipase esterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D CPj0700 CPj0700; CT676 hypothetical protein K19411 mcsA; protein arginine kinase activator D tigA tigA; trigger factor-peptidyl-prolyl isomerase K03545 tig; trigger factor D smpB smpB; small protein B K03664 smpB; SsrA-binding protein C 99976 Replication and repair D yigN yigN; YigN family hypothetical protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D CPj1026 CPj1026; LtuA protein K08274 ltuA; late transcription unit A protein D CPj0333 CPj0333; LtuB protein K08275 ltuB; late transcription unit B protein D ybaB ybaB; YbaB family hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D adt_1 adt_1; ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D adt_2 adt_2; ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D ygo4 ygo4; phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D CPj0486 CPj0486; hypothetical proline permease K03307 TC.SSS; solute:Na+ symporter, SSS family D CPj0290 CPj0290; Na-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D gltT gltT; glutamate symport K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D dagA_1 dagA_1; D-Ala/Gly permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D dagA_2 dagA_2; D-alanine/glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D brnQ brnQ; amino acid (branched) transport K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D ybhI ybhI; dicarboxylase translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D phoH phoH; ATPase K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D CPj0301 CPj0301; ompH-like outer membrane protein K06142 hlpA; outer membrane protein C 99994 Others D cutA cutA; periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D CPj0692 CPj0692; ABC transporter K09014 sufB; Fe-S cluster assembly protein SufB D CPj0690 CPj0690; ABC transporter membrane protein K09015 sufD; Fe-S cluster assembly protein SufD D CPj0188 CPj0188; CT132 hypothetical protein K07058 K07058; membrane protein D CPj0514 CPj0514; CT427 hypothetical protein K07081 K07081; putative periplasmic solute-binding protein D CPj0411 CPj0411; CT262 hypothetical protein K07083 K07083; putative periplasmic solute-binding protein D yceA yceA; YceA hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D CPj1057 CPj1057; CT356 hypothetical protein K06888 K06888; uncharacterized protein D CPj0161 CPj0161; acyltransferase family K06889 K06889; uncharacterized protein D CPj0152 CPj0152; CT149 hypothetical protein K06889 K06889; uncharacterized protein D yccA_2 yccA_2; transport permease K06890 K06890; uncharacterized protein D CPj0906 CPj0906; CT763 hypothetical protein K06960 K06960; uncharacterized protein D CPj0720 CPj0720; CT659 hypothetical protein K06960 K06960; uncharacterized protein D secA_1 secA_1; protein translocase subunit K07039 K07039; uncharacterized protein D yaeI yaeI; phosphohydrolase K07098 K07098; uncharacterized protein D CPj0606 CPj0606; CT488 hypothetical protein K07099 K07099; uncharacterized protein D CPj0878 CPj0878; SET domain protein K07117 K07117; uncharacterized protein D CPj0071 CPj0071; CT325 hypothetical protein K07125 K07125; uncharacterized protein D CPj0525 CPj0525; CT398 hypothetical protein K07164 K07164; uncharacterized protein D yidD yidD; YidD family K08998 K08998; uncharacterized protein D yqdE yqdE; YqdE hypothetical protein K08999 K08999; uncharacterized protein D CPj0497 CPj0497; CT388 hypothetical protein K09131 K09131; uncharacterized protein D CPj0001 CPj0001; CT001 hypothetical protein K09779 K09779; uncharacterized protein D CPj0681 CPj0681; CT691 hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024