+D GENES KO
#
KEGG Orthology (KO) - Chlamydia pneumoniae J138
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cpj00010]
D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D pfkA_1 pfkA_1; fructose-6-P phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D gapA gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D pgk pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D pyk pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D pdhA pdhA; pyruvate dehydrogenase alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D pdhB pdhB; pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D pdhC pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pckA pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cpj00020]
D sucA sucA; oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D sucB_1 sucB_1; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D sucB_2 sucB_2; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D sucD sucD; succinyl-CoA synthetase, alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D sucC sucC; succinyl-CoA synthetase, beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D sdhA sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D sdhB sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D sdhC sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D fumC fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D pckA pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D pdhA pdhA; pyruvate dehydrogenase alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D pdhB pdhB; pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D pdhC pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cpj00030]
D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D zwf zwf; glucose-6-P dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D devB devB; glucose-6-P dehdyrogenase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D gnd gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D rpe rpe; ribulose-P epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D tktB_1 tktB_1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D tal tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D rpiA rpiA; ribose-5-P isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D pfkA_1 pfkA_1; fructose-6-P phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions
D rpe rpe; ribulose-P epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:cpj00051]
D mrsA mrsA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D pfkA_1 pfkA_1; fructose-6-P phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism
D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:cpj00500]
D glgC glgC; glucose-1-P adenyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D glgA glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D glgB glgB; glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D glgP glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D malQ malQ; glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D glgX glgX; glycogen hydrolase K01214 ISA; isoamylase [EC:3.2.1.68]
D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpj00520]
D glmS glmS; glucosamine-fructose-6-P aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D pgm pgm; phosphoglucomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D glmU glmU; UDP-GlcNAc pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CPj0856 CPj0856; UDP-glucose pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D murA murA; UDP-N-acetylglucosamine transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D murB murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D mrsA mrsA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D glgC glgC; glucose-1-P adenyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cpj00620]
D pdhA pdhA; pyruvate dehydrogenase alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D pdhB pdhB; pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D pdhC pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pyk pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D accA accA; AcCoA carboxylase/transferase alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D accB accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D accC accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D accD accD; AcCoA carboxylase/transferase beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D fumC fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D pckA pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpj00630]
D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D gcsH gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:cpj00640]
D pdhA_pdhB pdhA_pdhB; (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D accA accA; AcCoA carboxylase/transferase alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D accB accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D accC accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D accD accD; AcCoA carboxylase/transferase beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D sucC sucC; succinyl-CoA synthetase, beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D sucD sucD; succinyl-CoA synthetase, alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism
D sdhA sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D sdhB sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D sdhC sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
C 00660 C5-Branched dibasic acid metabolism
D sucC sucC; succinyl-CoA synthetase, beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D sucD sucD; succinyl-CoA synthetase, alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism
D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cpj00190]
D sdhA sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D sdhB sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D sdhC sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D cydA cydA; cytochrome oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D cydB cydB; cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D atpA atpA; ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D atpB atpB; ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D atpD atpD; ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D atpE atpE; ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D atpI atpI; ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D atpK atpK; ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D ppa ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cpj00710]
D pgk pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D gapA gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D tktB_1 tktB_1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D rpiA rpiA; ribose-5-P isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D rpe rpe; ribulose-P epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D tal tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cpj00720]
D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D fumC fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D sdhA sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D sdhB sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D sdhC sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D sucD sucD; succinyl-CoA synthetase, alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D sucC sucC; succinyl-CoA synthetase, beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D accA accA; AcCoA carboxylase/transferase alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D accB accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D accC accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D accD accD; AcCoA carboxylase/transferase beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D folD folD; methylene tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00680 Methane metabolism [PATH:cpj00680]
D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D dhnA dhnA; 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism [PATH:cpj00920]
D cysQ cysQ; sulfite synthesis/biphosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D cysJ cysJ; sulfite reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cpj00061]
D accA accA; AcCoA carboxylase/transferase alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D accB accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D accC accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D accD accD; AcCoA carboxylase/transferase beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D acpP acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D fabD fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D fabH fabH; oxoacyl carrier protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D fabF fabF; acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D fabG fabG; oxoacyl (carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D fabZ fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D fabI fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:cpj00074]
D acpS acpS; acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D acpP acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D fabD fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cpj00561]
D plsB plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D plsX plsX; FA/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CPj0921 CPj0921; snGlycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D plsC plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:cpj00564]
D gpdA gpdA; glycerol-3-P dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D plsB plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D CPj0921 CPj0921; snGlycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D plsC plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D cdsA cdsA; phosphatidate cytidylytransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D pssA pssA; glycerol-serine phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D psdD psdD; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D pgsA_2 pgsA_2; glycerol-3-P phosphatydyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D pgsA_1 pgsA_1; glycerol-3-P phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cpj00230]
D surE surE; SurE-like acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CPj0374 CPj0374; CT056 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D guaB guaB; inosine 5'-monophosphase dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D ndk ndk; nucleoside-2-P kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D yggV yggV; YggV family hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D guaA guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D gmk gmk; GMP kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D nrdA nrdA; ribonucleoside reductase, large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D nrdB nrdB; ribonucleoside reductase, small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D amn amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D adk adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:cpj00240]
D CPj0608 CPj0608; uridine 5'-monophosphate synthase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D pyrH pyrH; UMP Kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D ndk ndk; nucleoside-2-P kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D maf maf; Maf-type protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D pyrG pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D cmk cmk; CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CPj0735 CPj0735; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D surE surE; SurE-like acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D dcd dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D nrdA nrdA; ribonucleoside reductase, large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D nrdB nrdB; ribonucleoside reductase, small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D tdk tdk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D dut dut; DutP nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpj00250]
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D glmS glmS; glucosamine-fructose-6-P aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:cpj00260]
D lysC lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D asd asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D gcsH gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D pssA pssA; glycerol-serine phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:cpj00270]
D yxjG_2 yxjG_2; hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CPj0374 CPj0374; CT056 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D lysC lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D asd asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D mdhC mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00280 Valine, leucine and isoleucine degradation [PATH:cpj00280]
D ldh ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D pdhA_pdhB pdhA_pdhB; (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpj00290]
D ldh ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:cpj00300]
D lysC lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D asd asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D dapA dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D dapB dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D dapF dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D aspC aspC; aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D murE murE; N-acetylmuramoylalanylglutamyl DAP ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D murF murF; muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cpj00310]
D sucB_1 sucB_1; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D sucB_2 sucB_2; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:cpj00330]
D CPj1032 CPj1032; CT373 hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00360 Phenylalanine metabolism
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism
D sucB_1 sucB_1; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D sucB_2 sucB_2; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpj00400]
D aroG aroG; deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D aroB aroB; dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D aroE aroE; shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D aroL aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D aroA aroA; phosphoshikimate vinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D aroC aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
D phnP phnP; metal dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:cpj00450]
D yxjG_2 yxjG_2; hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D yfhO_1 yfhO_1; NifS-related aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D trxB trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D metG metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cpj00470]
D murC_ddlA murC_ddlA; muramate-Ala ligase/D-Ala-D-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D murD murD; muramoylalanine-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D dapF dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:cpj00480]
D pepA pepA; leucyl aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D gnd gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D zwf zwf; glucose-6-P dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:cpj00540]
D lpxA lpxA; acyl-carrier UDP-GlcNAc O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D lpxC lpxC; myristoyl GlcNac deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D lpxD lpxD; UDP glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D lpxB lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D ycaH ycaH; ATPase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D kpsF kpsF; GutQ/KpsF family sugar-P isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D kdsA kdsA; KDO synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D kdsB kdsB; deoxyoctulonosic acid synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D gseA gseA; KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D htrB_2 htrB_2; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D htrB_1 htrB_1; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpj00541]
D mrsA mrsA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D glmU glmU; UDP-GlcNAc pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:cpj00550]
D murA murA; UDP-N-acetylglucosamine transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D murB murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D murC_ddlA murC_ddlA; muramate-Ala ligase/D-Ala-D-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D murD murD; muramoylalanine-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D murE murE; N-acetylmuramoylalanylglutamyl DAP ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D murF murF; muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D yaeS yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D mraY mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D murG murG; peptidoglycan transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D pbp3 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D dacF dacF; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cpj00730]
D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D tktB_2 tktB_2; transketolase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D adk adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cpj00740]
D ribA_ribB ribA_ribB; GTP cyclohydratase/DHBP synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D ribD ribD; riboflavin deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D ribE ribE; ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D ribC ribC; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D ribF ribF; FAD synthase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D ubiD ubiD; phenylacrylate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:cpj00760]
D surE surE; SurE-like acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
C 00770 Pantothenate and CoA biosynthesis [PATH:cpj00770]
D yacE yacE; phosphatase/kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D acpS acpS; acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:cpj00780]
D fabF fabF; acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D fabG fabG; oxoacyl (carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D fabZ fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D fabI fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D bioF_1 bioF_1; oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D bioF_2 bioF_2; oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D bioA bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D bioD bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D bioB bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D birA birA; biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cpj00785]
D lipA lipA; lipoate synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D lplA_1 lplA_1; lipoate protein ligase-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D lplA_2 lplA_2; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pdhA pdhA; pyruvate dehydrogenase alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D pdhB pdhB; pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D pdhC pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D sucA sucA; oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D sucB_1 sucB_1; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D sucB_2 sucB_2; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D pdhA_pdhB pdhA_pdhB; (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D gcsH gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cpj00790]
D folX folX; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D folP folP; dihydropteroate synthase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15]
D folA folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CPj0760 CPj0760; CT611 hypothetical protein K22099 folC2; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D ribA_ribB ribA_ribB; GTP cyclohydratase/DHBP synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
C 00670 One carbon pool by folate [PATH:cpj00670]
D folA folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D folD folD; methylene tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D glyA glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D fmt fmt; methionyl tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D ygfA ygfA; formyltetrahydrofolate cycloligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cpj00860]
D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D hemA hemA; glutamyl tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D hemL hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D hemB hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D hemC hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CPj0522 CPj0522; CT433 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D hemE hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D hemN_2 hemN_2; coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D hemG hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D hemZ hemZ; ferrochetalase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpj00130]
D ubiA ubiA; benzoate octaphenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D ubiD ubiD; phenylacrylate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D ubiE ubiE; ubiquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CPj0513 CPj0513; Fe-S oxidoreductase K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D CPj0911 CPj0911; Fe-S oxidoreductase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cpj00900]
D tktB_2 tktB_2; transketolase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D yaeM yaeM; CT071 hypothetical protein K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D yacM yacM; sugar nucleotide phosphorylase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CPj0954 CPj0954; kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CPj0955 CPj0955; frame-shift with CPj0954 K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D ygbB ygbB; YgbB family hypothetical protein K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D gcpE gcpE; GcpE protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D lytB lytB; metalloprotease K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D ubiD ubiD; phenylacrylate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D ispA ispA; geranyl transtransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D yaeS yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D tktB_1 tktB_1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:cpj00261]
D lysC lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D asd asd; aspartate dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D dapA dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D dapB dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D fabD fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D fabG fabG; oxoacyl (carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D fabI fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D acpP acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D aroE aroE; shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D CPj0328 CPj0328; CT085 hypothetical protein K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61]
D ubiD ubiD; phenylacrylate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cpj03020]
D rpoB rpoB; RNA polymerase beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D rpoC rpoC; RNA polymerase beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D rpoA rpoA; RNA polymerase alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cpj03010]
D rs1 rs1; S1 ribosomal protein K02945 RP-S1; small subunit ribosomal protein S1
D rs2 rs2; S2 ribosomal protein K02967 RP-S2; small subunit ribosomal protein S2
D rs3 rs3; S3 ribosomal protein K02982 RP-S3; small subunit ribosomal protein S3
D rs4 rs4; S4 ribosomal protein K02986 RP-S4; small subunit ribosomal protein S4
D rs5 rs5; S5 ribosomal protein K02988 RP-S5; small subunit ribosomal protein S5
D rs6 rs6; S6 ribosomal protein K02990 RP-S6; small subunit ribosomal protein S6
D rs7 rs7; S7 ribosomal protein K02992 RP-S7; small subunit ribosomal protein S7
D rs8 rs8; S8 ribosomal protein K02994 RP-S8; small subunit ribosomal protein S8
D rs9 rs9; S9 ribosomal protein K02996 RP-S9; small subunit ribosomal protein S9
D rs10 rs10; S10 ribosomal protein K02946 RP-S10; small subunit ribosomal protein S10
D rs11 rs11; S11 ribosomal protein K02948 RP-S11; small subunit ribosomal protein S11
D rs12 rs12; S12 ribosomal protein K02950 RP-S12; small subunit ribosomal protein S12
D rs13 rs13; S13 ribosomal protein K02952 RP-S13; small subunit ribosomal protein S13
D rs14 rs14; S14 ribosomal protein K02954 RP-S14; small subunit ribosomal protein S14
D rs15 rs15; S15 ribosomal protein K02956 RP-S15; small subunit ribosomal protein S15
D rs16 rs16; S16 ribosomal protein K02959 RP-S16; small subunit ribosomal protein S16
D rs17 rs17; S17 ribosomal protein K02961 RP-S17; small subunit ribosomal protein S17
D rs18 rs18; S18 ribosomal protein K02963 RP-S18; small subunit ribosomal protein S18
D rs19 rs19; S19 ribosomal protein K02965 RP-S19; small subunit ribosomal protein S19
D rs20 rs20; S20 ribosomal protein K02968 RP-S20; small subunit ribosomal protein S20
D rs21 rs21; S21 ribosomal protein K02970 RP-S21; small subunit ribosomal protein S21
D rl1 rl1; L1 ribosomal protein K02863 RP-L1; large subunit ribosomal protein L1
D rl2 rl2; L2 ribosomal protein K02886 RP-L2; large subunit ribosomal protein L2
D rl3 rl3; L3 ribosomal protein K02906 RP-L3; large subunit ribosomal protein L3
D rl4 rl4; L4 ribosomal protein K02926 RP-L4; large subunit ribosomal protein L4
D rl5 rl5; L5 ribosomal protein K02931 RP-L5; large subunit ribosomal protein L5
D rl6 rl6; L6 ribosomal protein K02933 RP-L6; large subunit ribosomal protein L6
D rl7 rl7; L7/L12 ribosomal protein K02935 RP-L7; large subunit ribosomal protein L7/L12
D rl9 rl9; L9 ribosomal protein K02939 RP-L9; large subunit ribosomal protein L9
D rl10 rl10; L10 ribosomal protein K02864 RP-L10; large subunit ribosomal protein L10
D rl11 rl11; L11 ribosomal protein K02867 RP-L11; large subunit ribosomal protein L11
D rl13 rl13; L13 ribosomal protein K02871 RP-L13; large subunit ribosomal protein L13
D rl14 rl14; L14 ribosomal protein K02874 RP-L14; large subunit ribosomal protein L14
D rl15 rl15; L15 ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15
D rl16 rl16; L16 ribosomal protein K02878 RP-L16; large subunit ribosomal protein L16
D rl17 rl17; L17 ribosomal protein K02879 RP-L17; large subunit ribosomal protein L17
D rl18 rl18; L18 ribosomal protein K02881 RP-L18; large subunit ribosomal protein L18
D rl19 rl19; L19 ribosomal protein K02884 RP-L19; large subunit ribosomal protein L19
D rl20 rl20; L20 ribosomal protein K02887 RP-L20; large subunit ribosomal protein L20
D rl21 rl21; L21 ribosomal protein K02888 RP-L21; large subunit ribosomal protein L21
D rl22 rl22; L22 ribosomal protein K02890 RP-L22; large subunit ribosomal protein L22
D rl23 rl23; L23 ribosomal protein K02892 RP-L23; large subunit ribosomal protein L23
D rl24 rl24; L24 ribosomal protein K02895 RP-L24; large subunit ribosomal protein L24
D ctc ctc; general stress protein K02897 RP-L25; large subunit ribosomal protein L25
D rl27 rl27; L27 ribosomal protein K02899 RP-L27; large subunit ribosomal protein L27
D rl28 rl28; L28 ribosomal protein K02902 RP-L28; large subunit ribosomal protein L28
D rl29 rl29; L29 ribosomal protein K02904 RP-L29; large subunit ribosomal protein L29
D rl31 rl31; L31 ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31
D rl32 rl32; L32 ribosomal protein K02911 RP-L32; large subunit ribosomal protein L32
D rl33 rl33; L33 ribosomal protein K02913 RP-L33; large subunit ribosomal protein L33
D rl34 rl34; L34 ribosomal protein K02914 RP-L34; large subunit ribosomal protein L34
D rl35 rl35; L35 ribosomal protein K02916 RP-L35; large subunit ribosomal protein L35
D rl36 rl36; L36 ribosomal protein K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpj00970]
D tRNA-Ala-1 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-2 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-1 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-3 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-2 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-1 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-3 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-1 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Va tRNA-Va; tRNA-Va K14237 tRNA-Val; tRNA Val
D tRNA-Val tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D gatA gatA; Glu tRNA Gln amidotransferae (A subunit) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D gatB gatB; (Pet112) Glu tRNA Gln amidotransferase (B subunit) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D gatC gatC; Glu-tRNA Gln amidotransferase (C subunit) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D alaS alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D aspS aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D glyQ glyQ; glycyl tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D thrS thrS; threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D serS serS; seryl tRNA synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D cysS cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D metG metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D fmt fmt; methionyl tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D valS valS; alyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D leuS leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ileS ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D lysS lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D argS argS; arginyl tRNA transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D proS proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D hisS hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D pheS pheS; phenylalanyl tRNA synthetase, alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D pheT pheT; phenylalanyl tRNA synthetase beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D tyrS tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D trpS trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cpj03060]
D secY secY; translocase K03076 secY; preprotein translocase subunit SecY
D secE secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D CPj1066 CPj1066; hypothetical protein K03075 secG; preprotein translocase subunit SecG
D secD_secF secD_secF; protein export K12257 secDF; SecD/SecF fusion protein
D CPj0884 CPj0884; CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D secA_2 secA_2; protein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ffh ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ftsY ftsY; cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D lepB lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D lspA lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cpj04122]
D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ycbF ycbF; PP-loop superfamily ATPase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cpj03018]
D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D pnp pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D vacB vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1]
D rho rho; transcription termination factor K03628 rho; transcription termination factor Rho
D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK
D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D pcnB_2 pcnB_2; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D pcnB_1 pcnB_1; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cpj03030]
D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnaB dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D dnaG dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein
D rnhB_1 rnhB_1; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D rnhB_2 rnhB_2; rbonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cpj03410]
D nth nth; enodnuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D ung ung; uracil DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D mutY mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CPj0505 CPj0505; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D nfo nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D recJ recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cpj03420]
D mfd mfd; transcription-repair coupling K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D uvrA uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D uvrB uvrB; exinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D uvrC uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D uvrD uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cpj03430]
D mutS mutS; DNA mismatch repair K03555 mutS; DNA mismatch repair protein MutS
D mutL mutL; DNA mismatch repair K03572 mutL; DNA mismatch repair protein MutL
D uvrD uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D xseA xseA; exodoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D recJ recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein
D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cpj03440]
D recJ recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CPj0339 CPj0339; RecF-ABC superfamily ATPase K03629 recF; DNA replication and repair protein RecF
D CPj0340 CPj0340; frame-shift with CPj0339 K03629 recF; DNA replication and repair protein RecF
D CPj0589 CPj0589; CT470 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D recR recR; recombination protein K06187 recR; recombination protein RecR
D recA recA; RecA recombination protein K03553 recA; recombination protein RecA
D ruvA ruvA; holliday junction helicase K03550 ruvA; holliday junction DNA helicase RuvA
D ruvB ruvB; holliday junction helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D ruvC ruvC; crossover junction endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D recB recB; exodeoxyribonuclease V, beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D recC recC; exodeoxyribonuclease V, gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D recD_2 recD_2; exodeoxyribonuclease V, alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D recD_1 recD_1; exodeoxyribonuclease V (alpha subunit) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D priA priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
D ide ide; insulinase family/protease III K01408 IDE; insulysin [EC:3.4.24.56]
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cpj02010]
D artJ artJ; arginine periplasmic binding protein K09996 artJ; arginine transport system substrate-binding protein
D glnP glnP; ABC amino acid transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D glnQ glnQ; ABC amino acid transporter ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CPj0278 CPj0278; conserved outer membrane lipoprotein protein K02073 metQ; D-methionine transport system substrate-binding protein
D CPj0279 CPj0279; possible ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D dppF_1 dppF_1; dipeptide transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein
D oppA_1 oppA_1; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D oppA_2 oppA_2; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D oppB_1 oppB_1; oligopeptide permease K15581 oppB; oligopeptide transport system permease protein
D oppC_1 oppC_1; oligopeptide permease K15582 oppC; oligopeptide transport system permease protein
D oppF oppF; oligopeptide transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D oppD oppD; oligopeptide transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D CPj0541 CPj0541; solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D CPj0543 CPj0543; metal transport protein K09816 znuB; zinc transport system permease protein
D CPj0542 CPj0542; ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D ytgA ytgA; solute protein binding family K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D ytgC ytgC; integral membrane protein K11708 troC; manganese/zinc/iron transport system permease protein
D ytgD ytgD; integral membrane protein K11709 troD; manganese/zinc/iron transport system permease protein
D ytgB_1 ytgB_1; rRNA methylase K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CPj0249 CPj0249; CT151 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D ycfV ycfV; ABC transporter ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CPj0996 CPj0996; CT839 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D CPj0995 CPj0995; CT838 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D yhbG yhbG; ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
C 02060 Phosphotransferase system (PTS) [PATH:cpj02060]
D ptsI ptsI; Pts pep phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D ptsH ptsH; Pts phosphocarrier protein hpr K02784 ptsH; phosphocarrier protein HPr
D ptsN_1 ptsN_1; Pts IIA Protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D ptsN_2 ptsN_2; Pts IIA protein with HTH DNA-Binding domain K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:cpj03070]
D yscC yscC; YopC/Gen secretion protein D K03219 yscC; type III secretion protein C
D lcrE lcrE; low calcium response E K04058 yscW; type III secretion protein W
D yscJ yscJ; Yop translocation J K03222 yscJ; type III secretion protein J
D yscR yscR; Yop translocation R K03226 yscR; type III secretion protein R
D yscS yscS; YopS translocation protein K03227 yscS; type III secretion protein S
D yscT yscT; YopT tranlocation T K03228 yscT; type III secretion protein T
D yscU yscU; Yop translocation protein U K03229 yscU; type III secretion protein U
D lcrD lcrD; low calcium response D K03230 yscV; type III secretion protein V
D yscN yscN; YopN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D yscL yscL; Yop translocation L K03223 yscL; type III secretion protein L
D gspD gspD; general secretion protein D K02453 gspD; general secretion pathway protein D
D gspF gspF; general secretion protein F K02455 gspF; general secretion pathway protein F
D gspE gspE; genral secretion protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D secD_secF secD_secF; protein export K12257 secDF; SecD/SecF fusion protein
D secE secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D CPj1066 CPj1066; hypothetical protein K03075 secG; preprotein translocase subunit SecG
D secY secY; translocase K03076 secY; preprotein translocase subunit SecY
D CPj0884 CPj0884; CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D secA_2 secA_2; protein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ftsY ftsY; cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D ffh ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cpj02020]
D htrA htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D rpsD rpsD; sigma-28/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D dnaA_1 dnaA_1; replication initiation factor K02313 dnaA; chromosomal replication initiator protein
D dnaA_2 dnaA_2; replication initiation factor K02313 dnaA; chromosomal replication initiator protein
D uhpC uhpC; hexosphosphate transport K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D atoS atoS; 2-component sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D atoC atoC; 2-component regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D rpoN rpoN; RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D cydA cydA; cytochrome oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D cydB cydB; cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cpj02024]
D xasA xasA; amino acid transporter K20265 gadC; glutamate:GABA antiporter
D ribD ribD; riboflavin deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D oppA_1 oppA_1; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D oppA_2 oppA_2; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D oppB_1 oppB_1; oligopeptide permease K15581 oppB; oligopeptide transport system permease protein
D oppC_1 oppC_1; oligopeptide permease K15582 oppC; oligopeptide transport system permease protein
D oppF oppF; oligopeptide transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D oppD oppD; oligopeptide transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D oppA_3 oppA_3; oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D oppA_4 oppA_4; oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D oppA_5 oppA_5; oligopeptide binding lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D oppB_2 oppB_2; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D oppC_2 oppC_2; oligopeptide permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D dppD dppD; ABC ATPase dipeptide transport K02031 ddpD; peptide/nickel transport system ATP-binding protein
D dppF_2 dppF_2; ABC ATPase dipeptide transport K02032 ddpF; peptide/nickel transport system ATP-binding protein
D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D secD_secF secD_secF; protein export K12257 secDF; SecD/SecF fusion protein
D secE secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D CPj1066 CPj1066; hypothetical protein K03075 secG; preprotein translocase subunit SecG
D secY secY; translocase K03076 secY; preprotein translocase subunit SecY
D CPj0884 CPj0884; CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D secA_2 secA_2; protein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ftsY ftsY; cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D ffh ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D fliN fliN; flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN
C 02040 Flagellar assembly [PATH:cpj02040]
D fliF fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D CPj0859 CPj0859; CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D fliI fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D fliN fliN; flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN
D flhA flhA; flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA
D rpoD rpoD; RNA polymerase sigma-66 K03086 rpoD; RNA polymerase primary sigma factor
D rpoN rpoN; RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D rpsD rpsD; sigma-28/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cpj01501]
D oppA_1 oppA_1; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D oppA_2 oppA_2; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D oppB_1 oppB_1; oligopeptide permease K15581 oppB; oligopeptide transport system permease protein
D oppC_1 oppC_1; oligopeptide permease K15582 oppC; oligopeptide transport system permease protein
D oppF oppF; oligopeptide transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D oppD oppD; oligopeptide transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D pbp3 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cpj01502]
D murC_ddlA murC_ddlA; muramate-Ala ligase/D-Ala-D-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D murF murF; muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D mraY mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D murG murG; peptidoglycan transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpj01503]
D amiA amiA; N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D htrA htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D lpxA lpxA; acyl-carrier UDP-GlcNAc O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cpj01000]
C 01001 Protein kinases [BR:cpj01001]
D CPj0095 CPj0095; S/T protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D rsbW rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D atoS atoS; 2-component sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cpj01009]
D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CPj0397 CPj0397; PP2C phosphatase family K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cpj01002]
D lspA lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D guaA guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D glmS glmS; glucosamine-fructose-6-P aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CPj0400 CPj0400; CT254 hypothetical protein K07052 K07052; CAAX protease family protein
D pepF pepF; oligopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D ide ide; insulinase family/protease III K01408 IDE; insulysin [EC:3.4.24.56]
D CPj0981 CPj0981; zinc metalloprotease K06972 PITRM1; presequence protease [EC:3.4.24.-]
D pepA pepA; leucyl aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D map map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D pepP pepP; aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D ftsH ftsH; ATP-dependent zinc protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D yaeL yaeL; metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D htrA htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D dacF dacF; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D clpP_1 clpP_1; CLP protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D clpP_2 clpP_2; CLP protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D lon lon; Lon ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D lepB lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D tsp tsp; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
C 01003 Glycosyltransferases [BR:cpj01003]
D glgA glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpj01005]
D lpxA lpxA; acyl-carrier UDP-GlcNAc O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D lpxB lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D lpxC lpxC; myristoyl GlcNac deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D lpxD lpxD; UDP glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D ycaH ycaH; ATPase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D htrB_2 htrB_2; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D htrB_1 htrB_1; acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D gseA gseA; KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D kdsA kdsA; KDO synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D kdsB kdsB; deoxyoctulonosic acid synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D kpsF kpsF; GutQ/KpsF family sugar-P isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpj01011]
D murA murA; UDP-N-acetylglucosamine transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D murB murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D murC_ddlA murC_ddlA; muramate-Ala ligase/D-Ala-D-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D murD murD; muramoylalanine-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D murE murE; N-acetylmuramoylalanylglutamyl DAP ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D mraY mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D murG murG; peptidoglycan transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D mviN mviN; integral membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D pbp3 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D dacF dacF; D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D amiA amiA; N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cpj01004]
D fabD fabD; malonyl acyl carrier transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D fabH fabH; oxoacyl carrier protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D fabF fabF; acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D fabG fabG; oxoacyl (carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D fabZ fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D fabI fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D plsB plsB; glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D plsX plsX; FA/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CPj0921 CPj0921; snGlycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D plsC plsC; glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cpj01006]
D ispA ispA; geranyl transtransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D yaeS yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D miaA miaA; tRNA pyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D ubiA ubiA; benzoate octaphenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:cpj01007]
D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D tyrS tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D trpS trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D cysS cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D argS argS; arginyl tRNA transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D metG metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D ileS ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D valS valS; alyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D leuS leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D lysS lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D aspS aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D hisS hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D serS serS; seryl tRNA synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D proS proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D thrS thrS; threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D alaS alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D pheS pheS; phenylalanyl tRNA synthetase, alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D pheT pheT; phenylalanyl tRNA synthetase beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D tyrB tyrB; aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D aspC aspC; aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D bioF_1 bioF_1; oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D bioF_2 bioF_2; oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D bioA bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D hemL hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cpj00194]
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cpj03000]
D birA birA; biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D parB parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D argR argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D hrcA hrcA; HTH transcriptional repressor K03705 hrcA; heat-inducible transcriptional repressor
D yqgE yqgE; YqgE hypothetical protein K07735 algH; putative transcriptional regulator
D dksA dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
D CPj0533 CPj0533; CT406 hypothetical protein K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:cpj03021]
D rpoA rpoA; RNA polymerase alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D rpoB rpoB; RNA polymerase beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D rpoC rpoC; RNA polymerase beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D rpoD rpoD; RNA polymerase sigma-66 K03086 rpoD; RNA polymerase primary sigma factor
D rpoN rpoN; RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D rpsD rpsD; sigma-28/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D nusA nusA; N utilization protein A K02600 nusA; transcription termination/antitermination protein NusA
D CPj0989 CPj0989; CT832 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D nusG nusG; transcriptional antitermination K02601 nusG; transcription termination/antitermination protein NusG
D rbsU rbsU; sigma regulatory family protein - PP2C phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D rsbV_1 rsbV_1; sigma regulatory factor K04749 rsbV; anti-sigma B factor antagonist
D rsbW rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D dksA dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
D rho rho; transcription termination factor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cpj03019]
D cafE cafE; axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D rnc rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D vacB vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1]
D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D pnp pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D rho rho; transcription termination factor K03628 rho; transcription termination factor Rho
D pfkA_2 pfkA_2; fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK
D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D pcnB_2 pcnB_2; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D pcnB_1 pcnB_1; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:cpj03011]
D rs1 rs1; S1 ribosomal protein K02945 RP-S1; small subunit ribosomal protein S1
D rs2 rs2; S2 ribosomal protein K02967 RP-S2; small subunit ribosomal protein S2
D rs3 rs3; S3 ribosomal protein K02982 RP-S3; small subunit ribosomal protein S3
D rs4 rs4; S4 ribosomal protein K02986 RP-S4; small subunit ribosomal protein S4
D rs5 rs5; S5 ribosomal protein K02988 RP-S5; small subunit ribosomal protein S5
D rs6 rs6; S6 ribosomal protein K02990 RP-S6; small subunit ribosomal protein S6
D rs7 rs7; S7 ribosomal protein K02992 RP-S7; small subunit ribosomal protein S7
D rs8 rs8; S8 ribosomal protein K02994 RP-S8; small subunit ribosomal protein S8
D rs9 rs9; S9 ribosomal protein K02996 RP-S9; small subunit ribosomal protein S9
D rs10 rs10; S10 ribosomal protein K02946 RP-S10; small subunit ribosomal protein S10
D rs11 rs11; S11 ribosomal protein K02948 RP-S11; small subunit ribosomal protein S11
D rs12 rs12; S12 ribosomal protein K02950 RP-S12; small subunit ribosomal protein S12
D rs13 rs13; S13 ribosomal protein K02952 RP-S13; small subunit ribosomal protein S13
D rs14 rs14; S14 ribosomal protein K02954 RP-S14; small subunit ribosomal protein S14
D rs15 rs15; S15 ribosomal protein K02956 RP-S15; small subunit ribosomal protein S15
D rs16 rs16; S16 ribosomal protein K02959 RP-S16; small subunit ribosomal protein S16
D rs17 rs17; S17 ribosomal protein K02961 RP-S17; small subunit ribosomal protein S17
D rs18 rs18; S18 ribosomal protein K02963 RP-S18; small subunit ribosomal protein S18
D rs19 rs19; S19 ribosomal protein K02965 RP-S19; small subunit ribosomal protein S19
D rs20 rs20; S20 ribosomal protein K02968 RP-S20; small subunit ribosomal protein S20
D rs21 rs21; S21 ribosomal protein K02970 RP-S21; small subunit ribosomal protein S21
D rl1 rl1; L1 ribosomal protein K02863 RP-L1; large subunit ribosomal protein L1
D rl2 rl2; L2 ribosomal protein K02886 RP-L2; large subunit ribosomal protein L2
D rl3 rl3; L3 ribosomal protein K02906 RP-L3; large subunit ribosomal protein L3
D rl4 rl4; L4 ribosomal protein K02926 RP-L4; large subunit ribosomal protein L4
D rl5 rl5; L5 ribosomal protein K02931 RP-L5; large subunit ribosomal protein L5
D rl6 rl6; L6 ribosomal protein K02933 RP-L6; large subunit ribosomal protein L6
D rl9 rl9; L9 ribosomal protein K02939 RP-L9; large subunit ribosomal protein L9
D rl10 rl10; L10 ribosomal protein K02864 RP-L10; large subunit ribosomal protein L10
D rl11 rl11; L11 ribosomal protein K02867 RP-L11; large subunit ribosomal protein L11
D rl7 rl7; L7/L12 ribosomal protein K02935 RP-L7; large subunit ribosomal protein L7/L12
D rl13 rl13; L13 ribosomal protein K02871 RP-L13; large subunit ribosomal protein L13
D rl14 rl14; L14 ribosomal protein K02874 RP-L14; large subunit ribosomal protein L14
D rl15 rl15; L15 ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15
D rl16 rl16; L16 ribosomal protein K02878 RP-L16; large subunit ribosomal protein L16
D rl17 rl17; L17 ribosomal protein K02879 RP-L17; large subunit ribosomal protein L17
D rl18 rl18; L18 ribosomal protein K02881 RP-L18; large subunit ribosomal protein L18
D rl19 rl19; L19 ribosomal protein K02884 RP-L19; large subunit ribosomal protein L19
D rl20 rl20; L20 ribosomal protein K02887 RP-L20; large subunit ribosomal protein L20
D rl21 rl21; L21 ribosomal protein K02888 RP-L21; large subunit ribosomal protein L21
D rl22 rl22; L22 ribosomal protein K02890 RP-L22; large subunit ribosomal protein L22
D rl23 rl23; L23 ribosomal protein K02892 RP-L23; large subunit ribosomal protein L23
D rl24 rl24; L24 ribosomal protein K02895 RP-L24; large subunit ribosomal protein L24
D rl27 rl27; L27 ribosomal protein K02899 RP-L27; large subunit ribosomal protein L27
D rl28 rl28; L28 ribosomal protein K02902 RP-L28; large subunit ribosomal protein L28
D rl29 rl29; L29 ribosomal protein K02904 RP-L29; large subunit ribosomal protein L29
D rl31 rl31; L31 ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31
D rl32 rl32; L32 ribosomal protein K02911 RP-L32; large subunit ribosomal protein L32
D rl33 rl33; L33 ribosomal protein K02913 RP-L33; large subunit ribosomal protein L33
D rl34 rl34; L34 ribosomal protein K02914 RP-L34; large subunit ribosomal protein L34
D rl35 rl35; L35 ribosomal protein K02916 RP-L35; large subunit ribosomal protein L35
D rl36 rl36; L36 ribosomal protein K02919 RP-L36; large subunit ribosomal protein L36
D ctc ctc; general stress protein K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:cpj03009]
D rnc rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D yhbZ yhbZ; GTP binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D dksA dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
D nusA nusA; N utilization protein A K02600 nusA; transcription termination/antitermination protein NusA
D CPj0989 CPj0989; CT832 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D nusG nusG; transcriptional antitermination K02601 nusG; transcription termination/antitermination protein NusG
D kgsA kgsA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D yhhF yhhF; methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D yabC_2 yabC_2; SAM-dependent methytransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D yabC_1 yabC_1; SAM-dependent methytransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CPj0531 CPj0531; SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D yjbC yjbC; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D yceC yceC; pseudouridine synthetase family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D sfhB sfhB; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CPj0251 CPj0251; conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D cafE cafE; axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D yggF yggF; YggF family hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D yphC yphC; GTPase/GTP-binding protein K03977 engA; GTPase
D hflX hflX; GTP binding protein K03665 hflX; GTPase
D ywlC ywlC; SuA5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D rbfA rbfA; ribosome binding factor A K02834 rbfA; ribosome-binding factor A
D ybeB ybeB; IojAP superfamily ortholog K09710 ybeB; ribosome-associated protein
D CPj0509 CPj0509; metalloenzyme K07042 ybeY; probable rRNA maturation factor
D ychF ychF; GTP binding protein K06942 ychF; ribosome-binding ATPase
D CPj0960 CPj0960; CT809 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cpj03016]
D atsA atsA; sulphohydrolase/glycosulfatase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D proS proS; prolyl tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ileS ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D leuS leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D metG metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D argS argS; arginyl tRNA transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D lysS lysS; lysyl tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D aspS aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D alaS alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D thrS thrS; threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D serS serS; seryl tRNA synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D cysS cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D valS valS; alyl tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D hisS hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D pheS pheS; phenylalanyl tRNA synthetase, alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D pheT pheT; phenylalanyl tRNA synthetase beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D tyrS tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D trpS trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D ycfF ycfF; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D yggH yggH; rRNA methylase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D truA truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D truB truB; tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ywlC ywlC; SuA5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D miaA miaA; tRNA pyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D thdF thdF; thiophene/furan oxidation protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D gidA gidA; FAD-dependent oxidoreductase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D cysQ cysQ; sulfite synthesis/biphosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D rnpA rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D glyQ glyQ; glycyl tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D yfhC yfhC; cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D yqeV yqeV; hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D trmD trmD; tRNA (guanine N-1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D spoU_2 spoU_2; rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D spoU_1 spoU_1; rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D ycbF ycbF; PP-loop superfamily ATPase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D tgt tgt; queuine tRNA ribosyl transferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D mesJ mesJ; PP-loop superfamily ATPase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D gcp_2 gcp_2; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D yjeE yjeE; YjeE hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D vacB vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1]
D pnp pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cpj03012]
D infB infB; initiation factor-2 K02519 infB; translation initiation factor IF-2
D infC infC; initiation factor 3 K02520 infC; translation initiation factor IF-3
D tsf tsf; elongation factor TS K02357 tsf; elongation factor Ts
D tufA tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D fusA fusA; elongation factor G K02355 fusA; elongation factor G
D pfrA pfrA; peptide chain releasing factor K02835 prfA; peptide chain release factor 1
D rrf rrf; ribosome releasing factor K02838 frr; ribosome recycling factor
D hemK hemK; A/G specific methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D pth pth; peptidyl tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D infA infA; initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D efp_1 efp_1; elongation factor P K02356 efp; elongation factor P
D efp_2 efp_2; elongation factor P K02356 efp; elongation factor P
D CPj0576_1 CPj0576_1; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cpj03110]
D clpB clpB; Clp protease ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D clpC clpC; ClpC protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D clpX clpX; CLP protease ATPase K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK
D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnaJ dnaJ; heat shock protein J K03686 dnaJ; molecular chaperone DnaJ
D grpE grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D groES groES; 10 KDa chaperonin K04078 groES; chaperonin GroES
D htrA htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ftsH ftsH; ATP-dependent zinc protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D trxA trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:cpj04131]
D ndk ndk; nucleoside-2-P kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D gapA gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D pyk pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:cpj03032]
D himD himD; integration host factor alpha K05788 ihfB; integration host factor subunit beta
D dnaA_1 dnaA_1; replication initiation factor K02313 dnaA; chromosomal replication initiator protein
D dnaA_2 dnaA_2; replication initiation factor K02313 dnaA; chromosomal replication initiator protein
D dnaB dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D dnaG dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein
D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D rnhB_1 rnhB_1; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D rnhB_2 rnhB_2; rbonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D gyrA_1 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D gyrA_2 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D gyrB_1 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D gyrB_2 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D topA topA; DNA topoisomerase I-fused to SWI domain K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cpj03036]
D rnc rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D himD himD; integration host factor alpha K05788 ihfB; integration host factor subunit beta
D dnaA_1 dnaA_1; replication initiation factor K02313 dnaA; chromosomal replication initiator protein
D dnaA_2 dnaA_2; replication initiation factor K02313 dnaA; chromosomal replication initiator protein
D pbp3 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D ftsK ftsK; cell division protein ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D ftsW ftsW; cell division protein ftsW K03588 ftsW; cell division protein FtsW
D amiA amiA; N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D mreB mreB; rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins
D rodA rodA; rod shape protein K05837 rodA; rod shape determining protein RodA
D minD minD; chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D parB parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D gidA gidA; FAD-dependent oxidoreductase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D xerC xerC; integrase/recombinase K03733 xerC; integrase/recombinase XerC
D xerD xerD; integrase/recombinase K04763 xerD; integrase/recombinase XerD
C 03400 DNA repair and recombination proteins [BR:cpj03400]
D ada ada; methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D ung ung; uracil DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CPj0505 CPj0505; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D mutY mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D nth nth; enodnuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D dut dut; DutP nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D nfo nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D recJ recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D dnlJ dnlJ; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D uvrA uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D uvrB uvrB; exinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D uvrC uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D uvrD uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D rpoB rpoB; RNA polymerase beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D rpoC rpoC; RNA polymerase beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D rpoA rpoA; RNA polymerase alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D mfd mfd; transcription-repair coupling K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D mutS mutS; DNA mismatch repair K03555 mutS; DNA mismatch repair protein MutS
D mutL mutL; DNA mismatch repair K03572 mutL; DNA mismatch repair protein MutL
D xseA xseA; exodoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D dnaE dnaE; DNA polymerase III alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D dnaN dnaN; DNA polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CPj0383 CPj0383; CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnaQ_1 dnaQ_1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnaQ_2 dnaQ_2; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D dnaX_2 dnaX_2; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D dnaX_1 dnaX_1; DNA polymerase III gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein
D recB recB; exodeoxyribonuclease V, beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D recC recC; exodeoxyribonuclease V, gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D recD_2 recD_2; exodeoxyribonuclease V, alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D recD_1 recD_1; exodeoxyribonuclease V (alpha subunit) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D recA recA; RecA recombination protein K03553 recA; recombination protein RecA
D ruvA ruvA; holliday junction helicase K03550 ruvA; holliday junction DNA helicase RuvA
D ruvB ruvB; holliday junction helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D ruvC ruvC; crossover junction endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D priA priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D sms sms; Sms protein K04485 radA; DNA repair protein RadA/Sms
D CPj0339 CPj0339; RecF-ABC superfamily ATPase K03629 recF; DNA replication and repair protein RecF
D CPj0340 CPj0340; frame-shift with CPj0339 K03629 recF; DNA replication and repair protein RecF
D CPj0589 CPj0589; CT470 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D recR recR; recombination protein K06187 recR; recombination protein RecR
D gyrA_1 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D gyrA_2 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D gyrB_1 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D gyrB_2 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D topA topA; DNA topoisomerase I-fused to SWI domain K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D himD himD; integration host factor alpha K05788 ihfB; integration host factor subunit beta
D nrdA nrdA; ribonucleoside reductase, large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D nrdB nrdB; ribonucleoside reductase, small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cpj03029]
D infB infB; initiation factor-2 K02519 infB; translation initiation factor IF-2
D infC infC; initiation factor 3 K02520 infC; translation initiation factor IF-3
D tsf tsf; elongation factor TS K02357 tsf; elongation factor Ts
D tufA tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D fusA fusA; elongation factor G K02355 fusA; elongation factor G
D tyrS tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D leuS leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D aspS aspS; aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D argS argS; arginyl tRNA transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D gatA gatA; Glu tRNA Gln amidotransferae (A subunit) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D gatB gatB; (Pet112) Glu tRNA Gln amidotransferase (B subunit) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D gatC gatC; Glu-tRNA Gln amidotransferase (C subunit) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D ssb ssb; SS DNA binding protein K03111 ssb; single-strand DNA-binding protein
D yaeT yaeT; omp85 analog K07277 SAM50; outer membrane protein insertion porin family
D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK
D grpE grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D groES groES; 10 KDa chaperonin K04078 groES; chaperonin GroES
D dnaJ dnaJ; heat shock protein J K03686 dnaJ; molecular chaperone DnaJ
D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cpj02000]
D yzeB yzeB; ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D tauB tauB; ABC transport ATPase (Nitrate/Fe) K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D artJ artJ; arginine periplasmic binding protein K09996 artJ; arginine transport system substrate-binding protein
D glnP glnP; ABC amino acid transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D glnQ glnQ; ABC amino acid transporter ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CPj0278 CPj0278; conserved outer membrane lipoprotein protein K02073 metQ; D-methionine transport system substrate-binding protein
D CPj0279 CPj0279; possible ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D dppF_1 dppF_1; dipeptide transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein
D fliY fliY; glutamine binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D oppA_1 oppA_1; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D oppA_2 oppA_2; oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D oppB_1 oppB_1; oligopeptide permease K15581 oppB; oligopeptide transport system permease protein
D oppC_1 oppC_1; oligopeptide permease K15582 oppC; oligopeptide transport system permease protein
D oppF oppF; oligopeptide transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D oppD oppD; oligopeptide transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D oppA_3 oppA_3; oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D oppA_4 oppA_4; oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D oppA_5 oppA_5; oligopeptide binding lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D oppB_2 oppB_2; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D oppC_2 oppC_2; oligopeptide permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D dppD dppD; ABC ATPase dipeptide transport K02031 ddpD; peptide/nickel transport system ATP-binding protein
D dppF_2 dppF_2; ABC ATPase dipeptide transport K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CPj0541 CPj0541; solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D CPj0543 CPj0543; metal transport protein K09816 znuB; zinc transport system permease protein
D CPj0542 CPj0542; ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D ytgA ytgA; solute protein binding family K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D ytgC ytgC; integral membrane protein K11708 troC; manganese/zinc/iron transport system permease protein
D ytgD ytgD; integral membrane protein K11709 troD; manganese/zinc/iron transport system permease protein
D ytgB_1 ytgB_1; rRNA methylase K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CPj0996 CPj0996; CT839 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D CPj0995 CPj0995; CT838 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D yhbG yhbG; ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CPj0249 CPj0249; CT151 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D ycfV ycfV; ABC transporter ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D abcX abcX; ABC transporter ATPase K09013 sufC; Fe-S cluster assembly ATP-binding protein
D uhpC uhpC; hexosphosphate transport K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D ptsI ptsI; Pts pep phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D ptsH ptsH; Pts phosphocarrier protein hpr K02784 ptsH; phosphocarrier protein HPr
D ptsN_1 ptsN_1; Pts IIA Protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D ptsN_2 ptsN_2; Pts IIA protein with HTH DNA-Binding domain K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D mgtE mgtE; Mg++ transporter K06213 mgtE; magnesium transporter
D exbD exbD; biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D exbB exbB; macromolecule transporter K03562 tolQ; biopolymer transport protein TolQ
D CPj0395 CPj0395; CT257 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D tlyC_2 tlyC_2; CBS domains (hemolysin homolog) K03699 tlyC; magnesium and cobalt exporter, CNNM family
D tlyC_1 tlyC_1; CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ompA ompA; major outer membrane protein K03162 ompA; major outer membrane protein
D ompB ompB; outer membrane protein B K08719 K08719; outer membrane protein B
D yaeT yaeT; omp85 analog K07277 SAM50; outer membrane protein insertion porin family
D arcD arcD; arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D xasA xasA; amino acid transporter K20265 gadC; glutamate:GABA antiporter
D tyrP_1 tyrP_1; tyrosine transport K03834 tyrP; tyrosine-specific transport protein
D ychM ychM; sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D mviN mviN; integral membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D CPj1045 CPj1045; conserved hypothetical bacterial membrane protein K09125 yhhQ; queuosine precursor transporter
D ypdP ypdP; YpdP hypothetical protein K09125 yhhQ; queuosine precursor transporter
D ftsW ftsW; cell division protein ftsW K03588 ftsW; cell division protein FtsW
D pal pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D tolB tolB; macromolecule transporter K03641 tolB; TolB protein
C 02044 Secretion system [BR:cpj02044]
D gspD gspD; general secretion protein D K02453 gspD; general secretion pathway protein D
D gspE gspE; genral secretion protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D gspF gspF; general secretion protein F K02455 gspF; general secretion pathway protein F
D CPj0767 CPj0767; CT645 hypothetical protein K02221 yggT; YggT family protein
D yscC yscC; YopC/Gen secretion protein D K03219 yscC; type III secretion protein C
D yscJ yscJ; Yop translocation J K03222 yscJ; type III secretion protein J
D yscL yscL; Yop translocation L K03223 yscL; type III secretion protein L
D yscN yscN; YopN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D yscR yscR; Yop translocation R K03226 yscR; type III secretion protein R
D yscS yscS; YopS translocation protein K03227 yscS; type III secretion protein S
D yscT yscT; YopT tranlocation T K03228 yscT; type III secretion protein T
D yscU yscU; Yop translocation protein U K03229 yscU; type III secretion protein U
D lcrD lcrD; low calcium response D K03230 yscV; type III secretion protein V
D lcrE lcrE; low calcium response E K04058 yscW; type III secretion protein W
D flhA flhA; flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA
D fliF fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D CPj0859 CPj0859; CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D fliI fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D fliN fliN; flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN
D secA_2 secA_2; protein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D secD_secF secD_secF; protein export K12257 secDF; SecD/SecF fusion protein
D secE secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D CPj1066 CPj1066; hypothetical protein K03075 secG; preprotein translocase subunit SecG
D secY secY; translocase K03076 secY; preprotein translocase subunit SecY
D ffh ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ftsY ftsY; cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D CPj0884 CPj0884; CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D 60IM 60IM; 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:cpj02042]
D CPj0395 CPj0395; CT257 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D tlyC_2 tlyC_2; CBS domains (hemolysin homolog) K03699 tlyC; magnesium and cobalt exporter, CNNM family
D tlyC_1 tlyC_1; CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cpj02022]
D atoS atoS; 2-component sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D atoC atoC; 2-component regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
C 02035 Bacterial motility proteins [BR:cpj02035]
D CPj0859 CPj0859; CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D fliI fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D flhA flhA; flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA
D fliN fliN; flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN
D fliF fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D rpsD rpsD; sigma-28/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cpj04812]
D mreB mreB; rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins
D minD minD; chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D parB parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cpj04147]
D eno eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D gapA gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D pgk pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D pyk pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ahpC ahpC; thio-specific antioxidant (TSA) peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D groEL_1 groEL_1; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D groEL_2 groEL_2; heat shock protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnaK dnaK; heat shock protein-70 K04043 dnaK; molecular chaperone DnaK
D pgi pgi; glucose-6-P isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D guaB guaB; inosine 5'-monophosphase dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D tufA tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D ycfF ycfF; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D adk adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D glgB glgB; glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D hemB hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D lpdA lpdA; lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D zwf zwf; glucose-6-P dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D tpiS tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D pgmA pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cpj02048]
D mreB mreB; rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins
D gltX gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D yfhO_2 yfhO_2; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D yhfO yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cpj03100]
D tRNA-Ala-1 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-2 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-1 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-3 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-2 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-1 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-3 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-1 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Va tRNA-Va; tRNA-Va K14237 tRNA-Val; tRNA Val
D tRNA-Val tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CPj0761 CPj0761; CT610 hypothetical protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D CPj0926 CPj0926; thioredoxin disulfide isomerase K01829 dsbH; disulfide reductase [EC:1.8.-.-]
D cutE cutE; apolipoprotein N-acetyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D lgt lgt; prolipoprotein diacylglycerol transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D yojL yojL; YojL hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D ybbP ybbP; YbbP family hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D karG karG; arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D yqfF yqfF; conserved hypothetical inner membrane protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D yabD yabD; PHP superfamily (urease/pyrimidinase) hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D def def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D mip mip; FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D nqrA nqrA; ubiquinone oxidoreductase, alpha K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D nqr2 nqr2; NADH (ubiquinone) dehydrogenase K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D nqr3 nqr3; NADH (ubiquinone) oxidoreductase, gamma K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D nqr4 nqr4; NADH (ubiquinone) reductase 4 K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D nqr5 nqr5; NADH (ubiquinone) reductase 5 K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D nqr6 nqr6; phenolhydrolase/NADH ubiquinone oxidoreductase 6 K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D zntA zntA; metal transport P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D CPj0861 CPj0861; NifU-related protein K13819 K13819; NifU-like protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D CPj0271 CPj0271; lysophospholipase esterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D CPj0700 CPj0700; CT676 hypothetical protein K19411 mcsA; protein arginine kinase activator
D tigA tigA; trigger factor-peptidyl-prolyl isomerase K03545 tig; trigger factor
D smpB smpB; small protein B K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D yigN yigN; YigN family hypothetical protein K09760 rmuC; DNA recombination protein RmuC
C 99979 Viral proteins
C 99998 Others
D CPj1026 CPj1026; LtuA protein K08274 ltuA; late transcription unit A protein
D CPj0333 CPj0333; LtuB protein K08275 ltuB; late transcription unit B protein
D ybaB ybaB; YbaB family hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D adt_1 adt_1; ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family
D adt_2 adt_2; ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family
D ygo4 ygo4; phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CPj0486 CPj0486; hypothetical proline permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D CPj0290 CPj0290; Na-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D gltT gltT; glutamate symport K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family
D dagA_1 dagA_1; D-Ala/Gly permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D dagA_2 dagA_2; D-alanine/glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D brnQ brnQ; amino acid (branched) transport K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D ybhI ybhI; dicarboxylase translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D phoH phoH; ATPase K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CPj0301 CPj0301; ompH-like outer membrane protein K06142 hlpA; outer membrane protein
C 99994 Others
D cutA cutA; periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CPj0692 CPj0692; ABC transporter K09014 sufB; Fe-S cluster assembly protein SufB
D CPj0690 CPj0690; ABC transporter membrane protein K09015 sufD; Fe-S cluster assembly protein SufD
D CPj0188 CPj0188; CT132 hypothetical protein K07058 K07058; membrane protein
D CPj0514 CPj0514; CT427 hypothetical protein K07081 K07081; putative periplasmic solute-binding protein
D CPj0411 CPj0411; CT262 hypothetical protein K07083 K07083; putative periplasmic solute-binding protein
D yceA yceA; YceA hypothetical protein K07146 K07146; UPF0176 protein
C 99997 Function unknown
D CPj1057 CPj1057; CT356 hypothetical protein K06888 K06888; uncharacterized protein
D CPj0161 CPj0161; acyltransferase family K06889 K06889; uncharacterized protein
D CPj0152 CPj0152; CT149 hypothetical protein K06889 K06889; uncharacterized protein
D yccA_2 yccA_2; transport permease K06890 K06890; uncharacterized protein
D CPj0906 CPj0906; CT763 hypothetical protein K06960 K06960; uncharacterized protein
D CPj0720 CPj0720; CT659 hypothetical protein K06960 K06960; uncharacterized protein
D secA_1 secA_1; protein translocase subunit K07039 K07039; uncharacterized protein
D yaeI yaeI; phosphohydrolase K07098 K07098; uncharacterized protein
D CPj0606 CPj0606; CT488 hypothetical protein K07099 K07099; uncharacterized protein
D CPj0878 CPj0878; SET domain protein K07117 K07117; uncharacterized protein
D CPj0071 CPj0071; CT325 hypothetical protein K07125 K07125; uncharacterized protein
D CPj0525 CPj0525; CT398 hypothetical protein K07164 K07164; uncharacterized protein
D yidD yidD; YidD family K08998 K08998; uncharacterized protein
D yqdE yqdE; YqdE hypothetical protein K08999 K08999; uncharacterized protein
D CPj0497 CPj0497; CT388 hypothetical protein K09131 K09131; uncharacterized protein
D CPj0001 CPj0001; CT001 hypothetical protein K09779 K09779; uncharacterized protein
D CPj0681 CPj0681; CT691 hypothetical protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024