+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium pseudotuberculosis P54B96
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cpp00010]
D CpP54B96_2096 nanK; N-acetylglucosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1438 glk; Glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_0650 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CpP54B96_0891 pfkA; 6-phosphofructo kinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CpP54B96_0749 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CpP54B96_1891 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CpP54B96_1124 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CpP54B96_0705 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CpP54B96_1126 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CpP54B96_1125 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CpP54B96_0262 gpmA; Phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CpP54B96_0725 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CpP54B96_1369 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CpP54B96_1525 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_0306 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_2023 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_1922 adhA; Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CpP54B96_0817 yihR; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CpP54B96_1719 pgm1; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CpP54B96_1228 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CpP54B96_2107 Aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D CpP54B96_1973 pckG; Phosphoenol pyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cpp00020]
D CpP54B96_0616 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CpP54B96_1095 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CpP54B96_0463 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CpP54B96_0809 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_1736 cat1; Succinyl-CoA Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CpP54B96_0247 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CpP54B96_0248 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CpP54B96_0246 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CpP54B96_0748 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CpP54B96_1622 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CpP54B96_1315 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CpP54B96_0480 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CpP54B96_1973 pckG; Phosphoenol pyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CpP54B96_1525 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
C 00030 Pentose phosphate pathway [PATH:cpp00030]
D CpP54B96_0650 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CpP54B96_1119 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CpP54B96_1121 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CpP54B96_1024 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CpP54B96_1136 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CpP54B96_1117 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CpP54B96_1118 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CpP54B96_1634 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CpP54B96_0167 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CpP54B96_0252 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CpP54B96_0490 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CpP54B96_1719 pgm1; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CpP54B96_0715 prsA; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CpP54B96_0143 idnK; Thermosensitive gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D CpP54B96_1891 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CpP54B96_0749 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CpP54B96_0891 pfkA; 6-phosphofructo kinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cpp00040]
D CpP54B96_1962 udgA; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CpP54B96_0679 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CpP54B96_1136 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:cpp00051]
D CpP54B96_0516 manA; Mannose-6-phosphate isomerase manA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CpP54B96_0168 pmmB; Phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0477 manB; Phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0514 manB; Phosphomannomutase ManB K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0509 manC; Mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CpP54B96_0891 pfkA; 6-phosphofructo kinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CpP54B96_0749 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CpP54B96_1254 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CpP54B96_1891 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CpP54B96_1124 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CpP54B96_1634 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CpP54B96_1255 ptsF; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CpP54B96_1342 manP; PTS system mannose-specific EIIBCA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:cpp00052]
D CpP54B96_0817 yihR; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CpP54B96_1513 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CpP54B96_0821 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CpP54B96_0820 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CpP54B96_1238 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CpP54B96_0679 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CpP54B96_1719 pgm1; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CpP54B96_2096 nanK; N-acetylglucosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1438 glk; Glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1998 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CpP54B96_0891 pfkA; 6-phosphofructo kinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CpP54B96_0797 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CpP54B96_0051 malL; Oligo-1,6-glucosidase 1 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:cpp00053]
D CpP54B96_1962 udgA; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CpP54B96_0087 sgaA; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CpP54B96_0088 ulaA; Ascorbate-specific permease IIC component ulaA K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:cpp00500]
D CpP54B96_0797 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CpP54B96_0051 malL; Oligo-1,6-glucosidase 1 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CpP54B96_0679 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CpP54B96_0800 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CpP54B96_0868 glgB; Glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CpP54B96_1367 glgP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CpP54B96_0714 pulA; Pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D CpP54B96_1561 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CpP54B96_0869 glgE; Glucanase GlgE K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D CpP54B96_0799 glgA; Glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CpP54B96_1387 glgX; Glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D CpP54B96_1781 otsA; Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CpP54B96_1783 otsB; Trehalose-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CpP54B96_1719 pgm1; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CpP54B96_2096 nanK; N-acetylglucosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1438 glk; Glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_0650 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpp00520]
D CpP54B96_1966 nagA; Beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CpP54B96_2094 nagA1; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CpP54B96_2093 nagB; Glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CpP54B96_1535 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CpP54B96_0410 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CpP54B96_0716 glmU; N-acetyl glucosamine-1-phosphate uridyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CpP54B96_1724 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CpP54B96_0259 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CpP54B96_2095 nanE; N-acylglucosamine-6-phosphate 2-epimeraseN-acetyl mannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D CpP54B96_2096 nanK; N-acetylglucosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1438 glk; Glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1228 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CpP54B96_1719 pgm1; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CpP54B96_0679 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CpP54B96_1962 udgA; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CpP54B96_1513 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CpP54B96_0821 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CpP54B96_0820 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CpP54B96_1238 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CpP54B96_1998 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CpP54B96_0650 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CpP54B96_0516 manA; Mannose-6-phosphate isomerase manA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CpP54B96_0168 pmmB; Phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0477 manB; Phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0514 manB; Phosphomannomutase ManB K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0509 manC; Mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CpP54B96_0800 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cpp00620]
D CpP54B96_1525 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_0256 pflB; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CpP54B96_1922 adhA; Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CpP54B96_1862 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CpP54B96_1863 eutD; Phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CpP54B96_1369 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CpP54B96_0483 accBC; Acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CpP54B96_1354 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CpP54B96_1736 cat1; Succinyl-CoA Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CpP54B96_0306 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_2023 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_1777 ilvB1; Acetolactate synthase large subunit IlvB1 K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CpP54B96_1184 gloB1; Metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CpP54B96_0480 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CpP54B96_1622 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CpP54B96_1315 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CpP54B96_0748 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CpP54B96_1123 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CpP54B96_1973 pckG; Phosphoenol pyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CpP54B96_0163 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpp00630]
D CpP54B96_1622 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CpP54B96_0616 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CpP54B96_1095 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CpP54B96_0865 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CpP54B96_0483 accBC; Acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CpP54B96_0493 pccB1; Propionyl CoA carboxylase beta chain 1 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CpP54B96_0494 pccB2; Propionyl-CoA carboxylase beta chain 2 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CpP54B96_0492 Hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CpP54B96_1084 sbm; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_1085 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_0178 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CpP54B96_1520 pgp; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CpP54B96_1509 glnA2; Glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1468 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_0739 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CpP54B96_1460 gcvP; Glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CpP54B96_1461 gcvT; Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_1462 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CpP54B96_1363 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CpP54B96_0809 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:cpp00640]
D CpP54B96_1862 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CpP54B96_1863 eutD; Phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_0256 pflB; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CpP54B96_1661 mas; Mycocerosic acid synthase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CpP54B96_0483 accBC; Acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CpP54B96_0578 Methylmalonyl-CoA carboxyltransferase 5S subunit K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D CpP54B96_0579 Methylmalonyl-CoA carboxyltransferase 12S subunit K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D CpP54B96_0580 Hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D CpP54B96_0581 Methylmalonyl-CoA carboxyltransferase 1.3S subunit K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D CpP54B96_0493 pccB1; Propionyl CoA carboxylase beta chain 1 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CpP54B96_0494 pccB2; Propionyl-CoA carboxylase beta chain 2 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CpP54B96_0492 Hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CpP54B96_0865 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CpP54B96_1084 sbm; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_1085 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_0306 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_2023 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cpp00650]
D CpP54B96_0247 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CpP54B96_0248 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CpP54B96_0246 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CpP54B96_0651 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CpP54B96_1964 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CpP54B96_1736 cat1; Succinyl-CoA Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CpP54B96_0256 pflB; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CpP54B96_0903 ilvH; Acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CpP54B96_0798 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:cpp00660]
D CpP54B96_0903 ilvH; Acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CpP54B96_0798 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CpP54B96_1182 CaiB/baiF CoA-transferase family protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D CpP54B96_1180 MaoC-like dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D CpP54B96_1179 Citrate lyase subunit beta-like protein K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D CpP54B96_0921 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CpP54B96_0922 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CpP54B96_0909 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cpp00562]
D CpP54B96_1375 impA; Inositol monophosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CpP54B96_0071 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D CpP54B96_1206 pgsA; CDP-diacylglycerol--inositol 3-phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D CpP54B96_1124 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cpp00190]
D CpP54B96_1028 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CpP54B96_0247 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CpP54B96_0248 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CpP54B96_0246 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CpP54B96_1445 qcrA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CpP54B96_1444 qcrB; Ubiquinol-cytochrome C reductase cytochrome B subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D CpP54B96_1446 qcrC; Ubiquinol-cytochrome C reductase cytochrome C subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D CpP54B96_1116 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CpP54B96_1448 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CpP54B96_1447 ctaE; Cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CpP54B96_1697 ctaD; Cytochrome C oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CpP54B96_1449 ctaC; Cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CpP54B96_1115 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CpP54B96_1732 cydA; Cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CpP54B96_1733 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CpP54B96_0858 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CpP54B96_0860 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CpP54B96_0859 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CpP54B96_0857 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CpP54B96_0861 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CpP54B96_0854 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CpP54B96_0856 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CpP54B96_0855 atpE; ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CpP54B96_1826 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CpP54B96_0698 pvdS; Transcriptional regulatory protein PvdS K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CpP54B96_1834 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cpp00710]
D CpP54B96_1125 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CpP54B96_0705 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CpP54B96_1126 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CpP54B96_1891 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CpP54B96_0749 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CpP54B96_1117 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CpP54B96_1634 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CpP54B96_1124 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CpP54B96_1136 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CpP54B96_1118 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CpP54B96_1123 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CpP54B96_1622 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cpp00720]
D CpP54B96_1123 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CpP54B96_0480 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CpP54B96_1622 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CpP54B96_0748 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CpP54B96_0247 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CpP54B96_0248 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CpP54B96_0246 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CpP54B96_0463 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CpP54B96_1095 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CpP54B96_0865 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CpP54B96_1084 sbm; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_1085 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_1060 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CpP54B96_0452 folD; Bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CpP54B96_1863 eutD; Phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CpP54B96_1862 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:cpp00680]
D CpP54B96_0739 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CpP54B96_0725 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CpP54B96_1123 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CpP54B96_1622 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CpP54B96_1891 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CpP54B96_0749 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CpP54B96_0891 pfkA; 6-phosphofructo kinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CpP54B96_1862 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CpP54B96_1863 eutD; Phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CpP54B96_0262 gpmA; Phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CpP54B96_0908 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CpP54B96_0614 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CpP54B96_1692 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cpp00910]
D CpP54B96_1878 nrfA; Nitrite reductase periplasmic cytochrome c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D CpP54B96_1879 nrfC; Cytochrome c nitrate reductase, small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D CpP54B96_0569 aniA; Copper-containing nitrite reductase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D CpP54B96_0131 norB; Nitric-oxide reductase, cytochrome b-containing subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D CpP54B96_0711 yrpB; Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CpP54B96_1362 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CpP54B96_1509 glnA2; Glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1468 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1797 bca; Beta family carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D CpP54B96_0593 cynT; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cpp00920]
D CpP54B96_1177 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CpP54B96_1259 azoR; FMN-dependent NADPH-azoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CpP54B96_0644 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CpP54B96_1298 DHH subfamily 1 protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CpP54B96_1896 sseB; Thiosulfate sulfurtransferase sseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CpP54B96_0484 cysA; Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CpP54B96_1729 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CpP54B96_1728 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cpp00061]
D CpP54B96_0483 accBC; Acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CpP54B96_1673 fas; Fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CpP54B96_1560 fadD15; Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_0260 lcfA1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cpp00071]
D CpP54B96_1560 fadD15; Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_0260 lcfA1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_1922 adhA; Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cpp00561]
D CpP54B96_1363 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CpP54B96_1078 dhaK; Dihydroxyacetone kinase subununit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D CpP54B96_1077 dhaL; Dihydroxyacetone kinase family protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D CpP54B96_1076 levD; Fructose-specific phosphotransferase enzyme IIA component K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D CpP54B96_0099 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CpP54B96_0974 nagD; Haloacid dehalogenase (HAD) superfamily hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D CpP54B96_1437 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CpP54B96_1774 Corynomycolyl transferase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CpP54B96_1988 cmtB; Trehalose corynomycolyl transferase B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CpP54B96_0073 Abhydrolase domain-containing protein 6 K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CpP54B96_1769 Hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:cpp00564]
D CpP54B96_0925 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CpP54B96_1897 glpD; Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CpP54B96_1437 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CpP54B96_1996 glpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CpP54B96_2019 glpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CpP54B96_1328 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CpP54B96_1280 pgsA1; Phosphatidylglycerophosphate synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CpP54B96_1855 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cpp00600]
D CpP54B96_0391 nanH; Neuraminidase (sialidase) K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:cpp01040]
D CpP54B96_0532 desA3; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D CpP54B96_0531 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D CpP54B96_1199 tesB; Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cpp00230]
D CpP54B96_1719 pgm1; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CpP54B96_0715 prsA; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CpP54B96_1752 purF; Amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CpP54B96_1767 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CpP54B96_0656 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CpP54B96_1867 purT; Phosphoribosyl glycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CpP54B96_1757 purL; Phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CpP54B96_1759 purS; Phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CpP54B96_1758 purQ; Phosphoribosylformylglycinamidne synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CpP54B96_1751 purM; Phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CpP54B96_0498 purK; Phosphoribosyl amino imidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CpP54B96_0499 purE; Phosphoribosyl amino imidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CpP54B96_1763 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CpP54B96_1764 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CpP54B96_0657 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CpP54B96_1189 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CpP54B96_1528 N-acetyl glucosamine related protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CpP54B96_0165 deoD; Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CpP54B96_1410 Uncharacterized protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CpP54B96_1804 iunH2; Inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D CpP54B96_1823 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CpP54B96_0430 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CpP54B96_0431 guaB2; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CpP54B96_1617 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CpP54B96_1682 Deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CpP54B96_0433 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CpP54B96_1097 Glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CpP54B96_1498 Inosine 5-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D CpP54B96_1144 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CpP54B96_1702 nrdE; Ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CpP54B96_1699 nrdF2; Ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CpP54B96_1755 nrdF; Ribonucleoside-diphosphate reductase beta chain 2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CpP54B96_0335 nrdD; Anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CpP54B96_1538 dgt; Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CpP54B96_1188 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CpP54B96_0266 gppA1; Ppx/GppA phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CpP54B96_0728 gppA2; Ppx/GppA phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CpP54B96_0232 cyaA; Adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CpP54B96_1880 purA; Adenylo succinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CpP54B96_0471 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CpP54B96_0068 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CpP54B96_0389 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CpP54B96_1207 Hit (histidine triad) family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D CpP54B96_1952 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CpP54B96_1953 ureB; Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CpP54B96_1954 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:cpp00240]
D CpP54B96_1148 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CpP54B96_1149 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CpP54B96_1151 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CpP54B96_1150 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CpP54B96_1072 pyrD; Dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CpP54B96_1894 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CpP54B96_1147 pyrF; Orotidine 5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CpP54B96_1330 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CpP54B96_1617 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CpP54B96_0489 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CpP54B96_0992 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CpP54B96_1528 N-acetyl glucosamine related protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CpP54B96_1804 iunH2; Inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D CpP54B96_0475 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CpP54B96_1152 pyrR; Pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CpP54B96_2021 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CpP54B96_0335 nrdD; Anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CpP54B96_1963 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CpP54B96_1702 nrdE; Ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CpP54B96_1699 nrdF2; Ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CpP54B96_1755 nrdF; Ribonucleoside-diphosphate reductase beta chain 2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CpP54B96_0521 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CpP54B96_1223 dut; Deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CpP54B96_2022 deoA; Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D CpP54B96_0643 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CpP54B96_1288 thyX; Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpp00250]
D CpP54B96_1403 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CpP54B96_0372 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CpP54B96_1450 asnB; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CpP54B96_1957 aspC; Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CpP54B96_1361 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CpP54B96_1061 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CpP54B96_0969 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CpP54B96_0970 argH; Argininosuccinase lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CpP54B96_1880 purA; Adenylo succinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CpP54B96_1764 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CpP54B96_1151 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CpP54B96_0651 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CpP54B96_1964 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CpP54B96_1362 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CpP54B96_1509 glnA2; Glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1468 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1148 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CpP54B96_1149 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CpP54B96_1758 purQ; Phosphoribosylformylglycinamidne synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CpP54B96_1535 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CpP54B96_1752 purF; Amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cpp00260]
D CpP54B96_0174 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CpP54B96_0176 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CpP54B96_0844 thrA; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CpP54B96_0845 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CpP54B96_1504 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CpP54B96_0739 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CpP54B96_1363 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CpP54B96_0262 gpmA; Phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CpP54B96_0908 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CpP54B96_0614 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CpP54B96_1692 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CpP54B96_1460 gcvP; Glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CpP54B96_1461 gcvT; Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_1462 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CpP54B96_1813 betA; Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D CpP54B96_1811 gbsA; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D CpP54B96_0630 cbs; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CpP54B96_1178 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CpP54B96_0370 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CpP54B96_1395 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CpP54B96_2122 trpA; Tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CpP54B96_2121 trpB; Tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cpp00270]
D CpP54B96_1729 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CpP54B96_1728 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CpP54B96_0630 cbs; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CpP54B96_1066 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CpP54B96_1141 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CpP54B96_1410 Uncharacterized protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CpP54B96_0520 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CpP54B96_0174 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CpP54B96_0176 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CpP54B96_0844 thrA; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CpP54B96_1456 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CpP54B96_1896 sseB; Thiosulfate sulfurtransferase sseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CpP54B96_0484 cysA; Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CpP54B96_0306 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_2023 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_1622 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CpP54B96_1178 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CpP54B96_0370 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CpP54B96_0908 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CpP54B96_0614 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cpp00280]
D CpP54B96_1456 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_0483 accBC; Acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CpP54B96_0493 pccB1; Propionyl CoA carboxylase beta chain 1 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CpP54B96_0494 pccB2; Propionyl-CoA carboxylase beta chain 2 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CpP54B96_0492 Hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CpP54B96_0865 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CpP54B96_1084 sbm; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_1085 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_0153 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CpP54B96_0285 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpp00290]
D CpP54B96_1395 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CpP54B96_0921 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CpP54B96_0922 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CpP54B96_0909 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CpP54B96_0903 ilvH; Acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CpP54B96_0904 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CpP54B96_0898 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CpP54B96_1456 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CpP54B96_1957 aspC; Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CpP54B96_0163 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cpp00300]
D CpP54B96_0844 thrA; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CpP54B96_0174 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CpP54B96_0176 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CpP54B96_1287 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CpP54B96_1664 dapA1; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CpP54B96_2102 nanL; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CpP54B96_1289 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CpP54B96_0787 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CpP54B96_0789 dapD1; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CpP54B96_0966 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CpP54B96_0790 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CpP54B96_1264 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CpP54B96_0843 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CpP54B96_0631 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CpP54B96_1419 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CpP54B96_1418 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cpp00310]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_0651 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CpP54B96_1964 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cpp00220]
D CpP54B96_0967 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CpP54B96_0969 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CpP54B96_0970 argH; Argininosuccinase lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CpP54B96_1952 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CpP54B96_1953 ureB; Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CpP54B96_1954 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D CpP54B96_1758 purQ; Phosphoribosylformylglycinamidne synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CpP54B96_1509 glnA2; Glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1468 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1148 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CpP54B96_1149 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CpP54B96_1362 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CpP54B96_1957 aspC; Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CpP54B96_0964 argJ; Glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CpP54B96_1853 Acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D CpP54B96_0965 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CpP54B96_0963 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CpP54B96_0966 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cpp00330]
D CpP54B96_0268 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CpP54B96_1610 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CpP54B96_1606 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CpP54B96_0707 pip; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:cpp00340]
D CpP54B96_1063 hisG; ATP phosphoribosyl transferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CpP54B96_1064 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CpP54B96_1373 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CpP54B96_1376 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CpP54B96_1377 hisH; Imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CpP54B96_1374 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CpP54B96_1380 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CpP54B96_1519 cobC; Cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_0126 pat; Phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_1381 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_0583 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D CpP54B96_1382 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cpp00350]
D CpP54B96_1519 cobC; Cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_0126 pat; Phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_1381 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_1922 adhA; Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D CpP54B96_0651 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CpP54B96_1964 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CpP54B96_0156 hpaF; 2-hydroxyhepta-2,4-diene-1,7-dioatesomerase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism
D CpP54B96_1519 cobC; Cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_0126 pat; Phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_1381 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cpp00380]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_0178 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpp00400]
D CpP54B96_1434 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CpP54B96_1160 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CpP54B96_1159 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CpP54B96_1161 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CpP54B96_0534 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CpP54B96_1162 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CpP54B96_2117 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CpP54B96_2118 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CpP54B96_2119 trpD; Anthranilate phosphoribosyl transferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CpP54B96_1376 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CpP54B96_1371 trpC2; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CpP54B96_2120 trpC; Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D CpP54B96_2122 trpA; Tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CpP54B96_2121 trpB; Tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CpP54B96_0652 csm; Chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D CpP54B96_0136 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CpP54B96_2011 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CpP54B96_1519 cobC; Cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_0126 pat; Phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_1381 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D CpP54B96_1814 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cpp00430]
D CpP54B96_1361 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CpP54B96_1863 eutD; Phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CpP54B96_1862 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cpp00450]
D CpP54B96_1066 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CpP54B96_1107 csdA; Cysteine desulfurase (SufS)-like protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CpP54B96_2134 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CpP54B96_0690 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cpp00460]
D CpP54B96_1403 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CpP54B96_0372 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CpP54B96_0739 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cpp00470]
D CpP54B96_0415 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CpP54B96_0926 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CpP54B96_1758 purQ; Phosphoribosylformylglycinamidne synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CpP54B96_1685 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CpP54B96_1264 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CpP54B96_0843 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CpP54B96_0631 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cpp00480]
D CpP54B96_1849 Glutamate-cysteine ligase, family 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CpP54B96_1457 pepB; Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CpP54B96_1636 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CpP54B96_0463 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CpP54B96_1024 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CpP54B96_1119 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CpP54B96_1760 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cpp00515]
D CpP54B96_0685 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cpp00514]
D CpP54B96_0685 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cpp00511]
D CpP54B96_0391 nanH; Neuraminidase (sialidase) K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cpp00542]
D CpP54B96_0852 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpp00541]
D CpP54B96_0679 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CpP54B96_1238 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CpP54B96_1998 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CpP54B96_1962 udgA; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CpP54B96_0237 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CpP54B96_0239 rmlB; dTDP-4-dehydrorhamnose 3,5-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CpP54B96_0238 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D CpP54B96_0516 manA; Mannose-6-phosphate isomerase manA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CpP54B96_0168 pmmB; Phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0477 manB; Phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0514 manB; Phosphomannomutase ManB K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CpP54B96_0716 glmU; N-acetyl glucosamine-1-phosphate uridyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:cpp00550]
D CpP54B96_1724 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CpP54B96_0259 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CpP54B96_1413 murC; UDP-N-acetyl muramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CpP54B96_1419 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CpP54B96_0926 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CpP54B96_1418 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CpP54B96_1548 uppS2; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CpP54B96_1069 uppP; Undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CpP54B96_1994 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CpP54B96_1417 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CpP54B96_1414 murG; N-acetyl glucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CpP54B96_1420 ftsI; Penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CpP54B96_0039 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CpP54B96_0470 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CpP54B96_1825 pbp4; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CpP54B96_0160 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CpP54B96_0159 cobQ; Cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cpp00552]
D CpP54B96_1069 uppP; Undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CpP54B96_1994 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CpP54B96_0852 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cpp00543]
D CpP54B96_0852 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CpP54B96_1729 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cpp00730]
D CpP54B96_0875 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CpP54B96_1219 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CpP54B96_0928 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CpP54B96_0533 rsgA; Ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CpP54B96_0389 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cpp00740]
D CpP54B96_1133 ribA; Riboflavin biosynthesis protein ribBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CpP54B96_1135 ribD; Riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CpP54B96_1132 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CpP54B96_1134 ribE; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CpP54B96_1293 ribF; Riboflavin biosynthesis protein ribF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CpP54B96_1177 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CpP54B96_1259 azoR; FMN-dependent NADPH-azoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CpP54B96_0074 noxC; NADH dehydrogenase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39]
C 00750 Vitamin B6 metabolism [PATH:cpp00750]
D CpP54B96_1551 pdxY; Pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CpP54B96_0614 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CpP54B96_1504 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CpP54B96_0134 pdxS; Pyridoxal biosynthesis lyase pdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D CpP54B96_0135 pdxT; Glutamine amidotransferase subunit pdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cpp00760]
D CpP54B96_1689 pncB; Nicotinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CpP54B96_0165 deoD; Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CpP54B96_1528 N-acetyl glucosamine related protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CpP54B96_1605 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CpP54B96_0551 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CpP54B96_1706 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CpP54B96_1279 cinA; Competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CpP54B96_1667 yddQ; Isochorismatase family protein yddQ K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CpP54B96_0977 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CpP54B96_0651 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CpP54B96_1964 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cpp00770]
D CpP54B96_0903 ilvH; Acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CpP54B96_0904 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CpP54B96_0898 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CpP54B96_0764 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CpP54B96_1814 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CpP54B96_0738 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CpP54B96_1142 coaBC; Coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenate metabolism flavoprotein) K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CpP54B96_0934 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CpP54B96_0947 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CpP54B96_1672 acpS; 4-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CpP54B96_1456 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:cpp00780]
D CpP54B96_1201 bioW; 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D CpP54B96_1202 bioF; 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CpP54B96_0988 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CpP54B96_0986 bioD; Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CpP54B96_0989 bioD1; Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CpP54B96_0065 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CpP54B96_0918 bioB2; Biotin synthase 2 K01012 bioB; biotin synthase [EC:2.8.1.6]
D CpP54B96_0496 birA; Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cpp00785]
D CpP54B96_1464 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CpP54B96_1465 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_1525 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CpP54B96_0809 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CpP54B96_1460 gcvP; Glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CpP54B96_1461 gcvT; Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CpP54B96_1462 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cpp00790]
D CpP54B96_1821 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CpP54B96_1819 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CpP54B96_1818 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CpP54B96_1820 folP1; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CpP54B96_0792 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CpP54B96_0642 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CpP54B96_1620 folC; Bifunctional protein folC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CpP54B96_1133 ribA; Riboflavin biosynthesis protein ribBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CpP54B96_1626 pabB; Para-aminobenzoate synthase component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D CpP54B96_1748 pabC; 4-Amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CpP54B96_0680 moeA; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cpp00670]
D CpP54B96_0642 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CpP54B96_1060 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CpP54B96_0452 folD; Bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CpP54B96_0739 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CpP54B96_0656 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CpP54B96_0657 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CpP54B96_1138 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CpP54B96_1461 gcvT; Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CpP54B96_1066 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CpP54B96_0643 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CpP54B96_1288 thyX; Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CpP54B96_0678 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cpp00860]
D CpP54B96_0141 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0915 gltX1; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0277 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CpP54B96_0286 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CpP54B96_0280 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CpP54B96_0278 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CpP54B96_0283 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CpP54B96_0284 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CpP54B96_1092 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CpP54B96_1216 Chlorite dismutase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D CpP54B96_0279 hemD; Uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CpP54B96_1307 cobA; Uroporphyrinogen-III methylase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CpP54B96_0948 pqqE; Coenzyme PQQ synthesis protein E K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D CpP54B96_1116 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CpP54B96_1115 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CpP54B96_1041 cobJ; Precorrin-3B C(17)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D CpP54B96_1039 cobG; Precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D CpP54B96_1043 cobM; Precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CpP54B96_0640 cobF; Precorrin-6A synthase [deacetylating] K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D CpP54B96_1042 cobK; Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CpP54B96_1044 cobL; Precorrin-6Y C5,15-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D CpP54B96_1040 cobH; Precorrin-8X methyl mutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CpP54B96_1311 cobB; Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CpP54B96_1038 cobN; Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D CpP54B96_1725 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CpP54B96_1312 cobO; cob (I) yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CpP54B96_1319 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CpP54B96_1523 cobD; Cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CpP54B96_1453 cobU; Bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CpP54B96_1455 cobS; Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CpP54B96_1454 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CpP54B96_1516 Bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CpP54B96_1314 Magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D CpP54B96_1507 hmuO; Heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpp00130]
D CpP54B96_0305 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CpP54B96_0914 menF; Menaquinone-specific isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CpP54B96_0302 menD; 2-oxoglutarate decarboxylase/2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CpP54B96_0301 menC; O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CpP54B96_0298 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CpP54B96_0299 menB; Naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CpP54B96_1025 Thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D CpP54B96_0297 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cpp00900]
D CpP54B96_1219 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CpP54B96_1324 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CpP54B96_1789 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CpP54B96_0694 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CpP54B96_1788 ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CpP54B96_1322 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CpP54B96_0753 ispH; 4-hydroxy-3-methyl but-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CpP54B96_1566 idi; Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CpP54B96_1430 idsA; Geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CpP54B96_0736 uppS1; Undecaprenyl pyrophosphate synthase 1 K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CpP54B96_1548 uppS2; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CpP54B96_1117 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cpp00523]
D CpP54B96_0237 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CpP54B96_0239 rmlB; dTDP-4-dehydrorhamnose 3,5-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CpP54B96_0238 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CpP54B96_0914 menF; Menaquinone-specific isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CpP54B96_0239 rmlB; dTDP-4-dehydrorhamnose 3,5-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cpp00332]
D CpP54B96_1610 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CpP54B96_1606 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cpp00261]
D CpP54B96_0174 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CpP54B96_0176 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CpP54B96_1287 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CpP54B96_1664 dapA1; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CpP54B96_2102 nanL; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CpP54B96_1289 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cpp00521]
D CpP54B96_2096 nanK; N-acetylglucosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1438 glk; Glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1719 pgm1; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CpP54B96_0071 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D CpP54B96_1375 impA; Inositol monophosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CpP54B96_0237 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CpP54B96_0239 rmlB; dTDP-4-dehydrorhamnose 3,5-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CpP54B96_0238 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CpP54B96_2096 nanK; N-acetylglucosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CpP54B96_1438 glk; Glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cpp00525]
D CpP54B96_0237 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CpP54B96_0239 rmlB; dTDP-4-dehydrorhamnose 3,5-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cpp00401]
D CpP54B96_0136 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CpP54B96_1519 cobC; Cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_0126 pat; Phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_1381 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CpP54B96_2117 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CpP54B96_2118 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites
D CpP54B96_1141 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D CpP54B96_1354 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cpp00625]
D CpP54B96_1922 adhA; Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:cpp00633]
D CpP54B96_0315 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D CpP54B96_1952 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CpP54B96_1953 ureB; Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CpP54B96_1954 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cpp00626]
D CpP54B96_1922 adhA; Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cpp03020]
D CpP54B96_0325 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CpP54B96_0326 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CpP54B96_0397 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CpP54B96_1143 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CpP54B96_0601 uvrB; UvrABC system protein B K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cpp03010]
D CpP54B96_0944 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CpP54B96_1332 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CpP54B96_0356 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CpP54B96_0396 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CpP54B96_0377 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CpP54B96_2064 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CpP54B96_0338 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CpP54B96_0374 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CpP54B96_0409 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CpP54B96_0349 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CpP54B96_0395 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CpP54B96_0337 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CpP54B96_0394 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CpP54B96_0666 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CpP54B96_1291 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CpP54B96_1347 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CpP54B96_0359 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CpP54B96_0665 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CpP54B96_0354 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CpP54B96_1596 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CpP54B96_0312 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CpP54B96_0353 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CpP54B96_0350 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CpP54B96_0351 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CpP54B96_0368 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CpP54B96_0375 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CpP54B96_0317 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CpP54B96_2062 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CpP54B96_0316 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CpP54B96_0311 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CpP54B96_0408 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CpP54B96_0366 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CpP54B96_0379 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CpP54B96_0357 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CpP54B96_0398 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CpP54B96_0376 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CpP54B96_1340 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CpP54B96_0958 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CpP54B96_1613 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CpP54B96_0355 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CpP54B96_0352 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CpP54B96_0367 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CpP54B96_0713 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CpP54B96_1612 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CpP54B96_0668 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CpP54B96_0358 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CpP54B96_0378 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CpP54B96_0669 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CpP54B96_0670 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CpP54B96_0667 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CpP54B96_2144 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CpP54B96_0957 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CpP54B96_1705 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CpP54B96_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r12 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r09 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpp00970]
D CpP54B96_t42 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CpP54B96_t02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CpP54B96_t03 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CpP54B96_t18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t21 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t07 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t08 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t38 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t35 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CpP54B96_t44 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CpP54B96_t45 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CpP54B96_t30 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CpP54B96_t19 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CpP54B96_t22 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CpP54B96_t23 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CpP54B96_t24 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CpP54B96_t46 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CpP54B96_t49 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CpP54B96_t37 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CpP54B96_t29 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CpP54B96_t32 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CpP54B96_t39 tRNA-His K14226 tRNA-His; tRNA His
D CpP54B96_t01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CpP54B96_t41 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t20 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t04 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t40 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CpP54B96_t47 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CpP54B96_t34 tRNA-Met K14230 tRNA-Met; tRNA Met
D CpP54B96_t15 tRNA-Met K14230 tRNA-Met; tRNA Met
D CpP54B96_t17 tRNA-Met K14230 tRNA-Met; tRNA Met
D CpP54B96_t43 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CpP54B96_t36 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CpP54B96_t11 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CpP54B96_t26 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CpP54B96_t06 pseudogene K14233 tRNA-Ser; tRNA Ser
D CpP54B96_t05 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CpP54B96_t09 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CpP54B96_t10 pseudogene K14233 tRNA-Ser; tRNA Ser
D CpP54B96_t12 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CpP54B96_t14 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CpP54B96_t48 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CpP54B96_t16 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CpP54B96_t13 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CpP54B96_t28 tRNA-Val K14237 tRNA-Val; tRNA Val
D CpP54B96_t31 tRNA-Val K14237 tRNA-Val; tRNA Val
D CpP54B96_t33 tRNA-Val K14237 tRNA-Val; tRNA Val
D CpP54B96_0141 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0915 gltX1; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0883 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CpP54B96_0892 gatB; Glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CpP54B96_0882 gatC; Aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CpP54B96_1168 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CpP54B96_1171 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CpP54B96_1543 glyS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CpP54B96_1208 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CpP54B96_2006 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CpP54B96_1787 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CpP54B96_0690 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CpP54B96_1138 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CpP54B96_1621 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CpP54B96_2082 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CpP54B96_1405 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CpP54B96_1807 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CpP54B96_1959 lysS1; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CpP54B96_0842 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CpP54B96_1305 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CpP54B96_1183 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CpP54B96_0961 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CpP54B96_0962 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CpP54B96_0972 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CpP54B96_0468 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cpp03060]
D CpP54B96_0388 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D CpP54B96_0309 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CpP54B96_1122 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D CpP54B96_1192 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D CpP54B96_1191 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D CpP54B96_1193 secN; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CpP54B96_2141 yidC1; Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_2042 oxaA; Hypothetical protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_0527 secA; Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CpP54B96_1014 secA2; Protein translocase subunit secA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CpP54B96_1348 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CpP54B96_1351 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D CpP54B96_1049 tatA; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D CpP54B96_0804 tatB; Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB
D CpP54B96_1048 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D CpP54B96_1339 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CpP54B96_1400 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cpp04122]
D CpP54B96_0875 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CpP54B96_1896 sseB; Thiosulfate sulfurtransferase sseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CpP54B96_0484 cysA; Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CpP54B96_0877 mnmA; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cpp03018]
D CpP54B96_1614 rne; Ribonuclease E/G family K08300 rne; ribonuclease E [EC:3.1.26.12]
D CpP54B96_0725 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CpP54B96_1290 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CpP54B96_0822 deaD1; DEAD-box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CpP54B96_0848 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CpP54B96_1286 Ribonuclease j Rv2752c K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CpP54B96_1929 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CpP54B96_1837 groEL1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_0424 groEL; Chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_0698 pvdS; Transcriptional regulatory protein PvdS K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CpP54B96_1834 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CpP54B96_2129 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cpp03030]
D CpP54B96_0879 dnaQ2; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0161 dnaQ1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0911 dnaQ3; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_1388 polC; DNA polymerase III PolC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_1396 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CpP54B96_0149 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CpP54B96_0233 dnaX; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CpP54B96_1599 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CpP54B96_0003 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CpP54B96_2059 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CpP54B96_1534 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CpP54B96_1644 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_2063 ssb1; Single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_1516 Bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CpP54B96_1338 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CpP54B96_0942 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CpP54B96_0880 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cpp03410]
D CpP54B96_0212 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CpP54B96_0929 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CpP54B96_1798 mutY; A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CpP54B96_2078 mutM2; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CpP54B96_1356 mutM1; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CpP54B96_0648 nei; DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CpP54B96_0091 tagA; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CpP54B96_0647 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CpP54B96_1854 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CpP54B96_0466 Endonuclease/Exonuclease/phosphatase family K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CpP54B96_0942 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CpP54B96_0880 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cpp03420]
D CpP54B96_0720 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CpP54B96_0955 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CpP54B96_0949 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CpP54B96_1130 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CpP54B96_0549 uvrD; DNA helicase, UvrD/REP type K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0552 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0653 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_1484 Hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0942 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CpP54B96_0880 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CpP54B96_0601 uvrB; UvrABC system protein B K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cpp03430]
D CpP54B96_0549 uvrD; DNA helicase, UvrD/REP type K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0552 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0653 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_1484 Hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0752 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CpP54B96_0751 xseB; Exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CpP54B96_1644 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_2063 ssb1; Single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_1396 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CpP54B96_0003 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CpP54B96_0149 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CpP54B96_1599 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CpP54B96_0233 dnaX; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CpP54B96_0879 dnaQ2; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0161 dnaQ1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0911 dnaQ3; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_1388 polC; DNA polymerase III PolC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0880 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cpp03440]
D CpP54B96_1644 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_2063 ssb1; Single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_0004 recF; Recombination protein F K03629 recF; DNA replication and repair protein RecF
D CpP54B96_1549 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D CpP54B96_0151 recR; Recombination protein recR K06187 recR; recombination protein RecR
D CpP54B96_1272 recA; Recombinase A K03553 recA; recombination protein RecA
D CpP54B96_0942 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CpP54B96_1195 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D CpP54B96_1194 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CpP54B96_1196 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CpP54B96_0931 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CpP54B96_1396 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CpP54B96_0003 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CpP54B96_0149 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CpP54B96_1599 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CpP54B96_0233 dnaX; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CpP54B96_0879 dnaQ2; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0161 dnaQ1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0911 dnaQ3; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_1388 polC; DNA polymerase III PolC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_1140 priA; Primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cpp03250]
D CpP54B96_0020 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cpp02010]
D CpP54B96_0187 potD; Spermidine/putrescine-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D CpP54B96_0186 potC; Spermidine/putrescine transport system permease protein PotC K02011 afuB; iron(III) transport system permease protein
D CpP54B96_0185 potA; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CpP54B96_0105 opuAC; Glycine betaine-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CpP54B96_0060 opuBB; Choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D CpP54B96_0061 opuBD; Choline transport system permease protein opuBD K05846 opuBD; osmoprotectant transport system permease protein
D CpP54B96_0062 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CpP54B96_0387 malK; Glycerol-3-phosphate-transporting ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CpP54B96_0381 malE; Maltotriose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CpP54B96_0382 malF; Maltose transport system permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CpP54B96_0383 malG; Maltose transport system permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CpP54B96_0505 malE; Maltose/maltodextrin transport system substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D CpP54B96_0503 malF; Maltose transport system permease protein malF K10237 thuF; trehalose/maltose transport system permease protein
D CpP54B96_0502 malG; Maltose transport system permease protein malG K10238 thuG; trehalose/maltose transport system permease protein
D CpP54B96_1743 pstS; Phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CpP54B96_1742 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D CpP54B96_1740 pstB; Phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CpP54B96_0659 gluB; Glutamate-binding protein GluB K10005 gluB; glutamate transport system substrate-binding protein
D CpP54B96_0660 gluC; Glutamate transport system permease protein gluC K10006 gluC; glutamate transport system permease protein
D CpP54B96_0661 gluD; Glutamate transport system permease protein gluD K10007 gluD; glutamate transport system permease protein
D CpP54B96_0658 gluA; Glutamate ABC transporter domain-containing ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D CpP54B96_0442 metQ; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D CpP54B96_0443 metQ1; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D CpP54B96_0440 metI; Methionine import system permease protein metI K02072 metI; D-methionine transport system permease protein
D CpP54B96_0441 metN; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D CpP54B96_0770 oppA3; Oligopeptide-binding protein oppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CpP54B96_0771 oppB3; Oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D CpP54B96_0772 oppC3; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D CpP54B96_0773 oppD2; Oligopeptide transport ATP-binding protein OppD K10823 oppF; oligopeptide transport system ATP-binding protein
D CpP54B96_0360 oppA1; Oligopeptide-binding protein oppA K13889 gsiB; glutathione transport system substrate-binding protein
D CpP54B96_0363 oppB1; Oligopeptide transport system permease protein oppB K13890 gsiC; glutathione transport system permease protein
D CpP54B96_0362 oppC1; Oligopeptide transport system permease protein oppC K13891 gsiD; glutathione transport system permease protein
D CpP54B96_0361 oppDF1; Oligopeptide transport ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D CpP54B96_0035 fagD; Iron siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CpP54B96_0034 fagA; Hypothetical protein K23186 fepD; iron-siderophore transport system permease protein
D CpP54B96_0033 fagB; Iron-enterobactin transporter K23187 fepG; iron-siderophore transport system permease protein
D CpP54B96_0032 fagC; ATP binding cytoplasmic membrane protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CpP54B96_0120 troA; Periplasmic zinc-binding protein troA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CpP54B96_0118 mntC; Manganese/zinc/iron transport system K11708 troC; manganese/zinc/iron transport system permease protein
D CpP54B96_0119 mntD; Manganese/zinc/iron transport system permease protein K11709 troD; manganese/zinc/iron transport system permease protein
D CpP54B96_0117 mntB; Manganese/zinc/iron transport system ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CpP54B96_1274 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CpP54B96_1276 bioN; Cobalt transport protein cbiQ K16783 bioN; biotin transport system permease protein
D CpP54B96_1275 bioM; Cobalt import ATP-binding protein CbiO K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CpP54B96_0767 cbiQ; Cobalt transport protein CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D CpP54B96_0123 rfbD; O-antigen export system ATP-binding protein RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D CpP54B96_0122 rfbE; O-antigen export system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CpP54B96_2087 ABC transporter inner membrane protein K09813 hrtB; hemin transport system permease protein
D CpP54B96_2086 ABC-type antimicrobial peptide transport system, ATPase component K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CpP54B96_0590 ftsX; Cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D CpP54B96_0589 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CpP54B96_1735 cydC; ATP-binding/permease protein cydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D CpP54B96_1734 cydD; ATP-binding/permease protein cydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:cpp02060]
D CpP54B96_1252 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CpP54B96_1257 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CpP54B96_0946 ptsG; Phosphotransferase system II Component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CpP54B96_1342 manP; PTS system mannose-specific EIIBCA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D CpP54B96_0087 sgaA; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CpP54B96_0088 ulaA; Ascorbate-specific permease IIC component ulaA K03475 ulaA; ascorbate PTS system EIIC component
D CpP54B96_1255 ptsF; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CpP54B96_1254 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cpp03070]
D CpP54B96_1192 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D CpP54B96_1191 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D CpP54B96_0309 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CpP54B96_1122 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D CpP54B96_0388 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D CpP54B96_1193 secN; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CpP54B96_2141 yidC1; Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_2042 oxaA; Hypothetical protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_0527 secA; Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CpP54B96_1014 secA2; Protein translocase subunit secA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CpP54B96_1351 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D CpP54B96_1348 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CpP54B96_1049 tatA; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D CpP54B96_0804 tatB; Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB
D CpP54B96_1048 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cpp02020]
D CpP54B96_0189 mprA; Response regulator mprA K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CpP54B96_0263 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CpP54B96_0264 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CpP54B96_1743 pstS; Phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CpP54B96_1115 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CpP54B96_0672 tcsS4; Two component system sensor kinase protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CpP54B96_0671 tcsR4; Two component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D CpP54B96_0673 pepD; Serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CpP54B96_0523 mtrB; Sensor histidine kinase mtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CpP54B96_0522 mtrA; DNA-binding response regulator mtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CpP54B96_0001 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CpP54B96_0997 Hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D CpP54B96_0662 citE; Citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CpP54B96_0994 dcuB; Anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CpP54B96_0222 gspE; GSPII_E, type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CpP54B96_0223 Hypothetical protein K12510 tadB; tight adherence protein B
D CpP54B96_1349 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CpP54B96_1350 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CpP54B96_1509 glnA2; Glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1468 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1828 dctA; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CpP54B96_0210 glxR; CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CpP54B96_1732 cydA; Cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CpP54B96_1733 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CpP54B96_1521 ptpA; Low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cpp02024]
D CpP54B96_2117 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CpP54B96_2118 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CpP54B96_1434 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CpP54B96_1560 fadD15; Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_0260 lcfA1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_0210 glxR; CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CpP54B96_1135 ribD; Riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CpP54B96_1640 Hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CpP54B96_0770 oppA3; Oligopeptide-binding protein oppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CpP54B96_0771 oppB3; Oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D CpP54B96_0772 oppC3; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D CpP54B96_0773 oppD2; Oligopeptide transport ATP-binding protein OppD K10823 oppF; oligopeptide transport system ATP-binding protein
D CpP54B96_1190 oppA4; Oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CpP54B96_0634 oppA2; Oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CpP54B96_1577 oppA5; ABC-type dipeptide transport system, periplasmic componen K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CpP54B96_2098 oppA7; Oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CpP54B96_0635 oppB2; Oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_1578 oppB4; Oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_1588 Hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_1937 oppB5; Oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_2099 oppB6; Oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_0636 oppC2; Oligopeptide transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CpP54B96_1579 oppC4; Oligopeptide transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CpP54B96_1936 oppCD1; Oligopeptide transport system permease protein oppC K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_2100 oppCD2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_1592 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_0637 oppD1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_1580 oppDF2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_1935 oppD3; Oligopeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CpP54B96_2101 oppF; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CpP54B96_2141 yidC1; Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_2042 oxaA; Hypothetical protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_1659 Peptidase, S8A (subtilisin) family protein K14645 K14645; serine protease [EC:3.4.21.-]
D CpP54B96_0309 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CpP54B96_1122 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D CpP54B96_0388 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D CpP54B96_1193 secN; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CpP54B96_0527 secA; Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CpP54B96_1014 secA2; Protein translocase subunit secA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CpP54B96_1351 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D CpP54B96_1348 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CpP54B96_1229 sigA; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CpP54B96_0725 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cpp04980]
D CpP54B96_1725 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CpP54B96_1083 Arginine/ornithine transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D CpP54B96_1084 sbm; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_1085 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CpP54B96_1066 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cpp01501]
D CpP54B96_1966 nagA; Beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CpP54B96_0770 oppA3; Oligopeptide-binding protein oppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CpP54B96_0771 oppB3; Oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D CpP54B96_0772 oppC3; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D CpP54B96_0773 oppD2; Oligopeptide transport ATP-binding protein OppD K10823 oppF; oligopeptide transport system ATP-binding protein
D CpP54B96_1420 ftsI; Penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cpp01502]
D CpP54B96_0926 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CpP54B96_0415 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CpP54B96_1418 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CpP54B96_1417 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CpP54B96_1414 murG; N-acetyl glucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpp01503]
D CpP54B96_2136 cwlM; N-Acetymuramyl-L-Alanine Amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CpP54B96_0020 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CpP54B96_0997 Hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cpp01000]
C 01001 Protein kinases [BR:cpp01001]
D CpP54B96_1861 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D CpP54B96_0038 pknA; Serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CpP54B96_0037 pknB; Serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CpP54B96_1433 pknL; Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CpP54B96_0263 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CpP54B96_0672 tcsS4; Two component system sensor kinase protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CpP54B96_0523 mtrB; Sensor histidine kinase mtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CpP54B96_1770 mtrB; Sensor histidine kinase mtrB K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CpP54B96_0190 senX3; Sensor-like histidine kinase senX3 K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cpp01009]
D CpP54B96_0520 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CpP54B96_0041 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CpP54B96_1692 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cpp01002]
D CpP54B96_1400 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CpP54B96_1163 Hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CpP54B96_0314 pepC1; Aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D CpP54B96_0433 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CpP54B96_1097 Glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CpP54B96_1440 Cell-wall peptidase NlpC/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CpP54B96_1093 Invasion-associated protein p60 K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D CpP54B96_1752 purF; Amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CpP54B96_1535 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CpP54B96_1450 asnB; Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CpP54B96_1906 srtA; Sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D CpP54B96_1933 srtA; Fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D CpP54B96_1902 srtB; Sortase B K07284 srtA; sortase A [EC:3.4.22.70]
D CpP54B96_2041 srtB; Sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D CpP54B96_0044 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D CpP54B96_1679 Caax amino protease K07052 K07052; CAAX protease family protein
D CpP54B96_1806 Caax amino protease family K07052 K07052; CAAX protease family protein
D CpP54B96_2105 CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D CpP54B96_1636 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CpP54B96_1564 dcp; Peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CpP54B96_0102 pepO; Metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CpP54B96_1457 pepB; Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CpP54B96_0790 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CpP54B96_1838 tpdA; Thiol precursor dipeptidase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D CpP54B96_1320 mapB; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CpP54B96_1822 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CpP54B96_0104 Hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D CpP54B96_0673 pepD; Serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CpP54B96_1659 Peptidase, S8A (subtilisin) family protein K14645 K14645; serine protease [EC:3.4.21.-]
D CpP54B96_0402 mycP; Subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CpP54B96_0241 Serine proteases of the peptidase family S9A K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D CpP54B96_1761 ptrB; Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CpP54B96_0470 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CpP54B96_1825 pbp4; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CpP54B96_1627 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CpP54B96_1628 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CpP54B96_0556 lon; Lon protease K07177 K07177; Lon-like protease
D CpP54B96_1250 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CpP54B96_1339 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CpP54B96_0707 pip; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 01003 Glycosyltransferases [BR:cpp01003]
D CpP54B96_1035 ppm1; Polyprenol-phosphate-mannose synthase domain 1 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CpP54B96_0685 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D CpP54B96_1204 pimA; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D CpP54B96_1439 pimB; Mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D CpP54B96_1848 Hypothetical protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D CpP54B96_0304 Glycosyl transferase group 1 K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D CpP54B96_0799 glgA; Glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CpP54B96_0852 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CpP54B96_1987 Hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D CpP54B96_2033 Hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D CpP54B96_1431 mptA; Alpha mannopyranosyltransferase K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CpP54B96_1112 Hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CpP54B96_0106 embC; Arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D CpP54B96_0107 aftA; Arabinofuranosyl transferase A K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D CpP54B96_1989 Hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CpP54B96_1214 Hypothetical protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D CpP54B96_1967 Arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D CpP54B96_0115 glfT1; UDP-galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D CpP54B96_1992 Hypothetical protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D CpP54B96_0508 wbbL; dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol, alpha-3-L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D CpP54B96_1781 otsA; Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CpP54B96_0793 Glycosyl transferase group 2 K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpp01005]
D CpP54B96_0852 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpp01011]
D CpP54B96_1724 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CpP54B96_0259 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CpP54B96_1413 murC; UDP-N-acetyl muramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CpP54B96_1419 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CpP54B96_0926 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CpP54B96_0415 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CpP54B96_1685 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CpP54B96_1417 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CpP54B96_1414 murG; N-acetyl glucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CpP54B96_1069 uppP; Undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CpP54B96_1994 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CpP54B96_2132 Hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D CpP54B96_1420 ftsI; Penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CpP54B96_0039 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CpP54B96_0470 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CpP54B96_1825 pbp4; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CpP54B96_1440 Cell-wall peptidase NlpC/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CpP54B96_1093 Invasion-associated protein p60 K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D CpP54B96_1906 srtA; Sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D CpP54B96_1933 srtA; Fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D CpP54B96_1902 srtB; Sortase B K07284 srtA; sortase A [EC:3.4.22.70]
D CpP54B96_2041 srtB; Sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D CpP54B96_1165 yceG; Amino deoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CpP54B96_2136 cwlM; N-Acetymuramyl-L-Alanine Amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cpp01004]
D CpP54B96_1673 fas; Fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CpP54B96_1199 tesB; Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D CpP54B96_0532 desA3; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D CpP54B96_1982 ppsA; Phthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13
D CpP54B96_1560 fadD15; Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_0260 lcfA1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_1983 fadD32; Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32
D CpP54B96_1437 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cpp01006]
D CpP54B96_1430 idsA; Geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CpP54B96_0736 uppS1; Undecaprenyl pyrophosphate synthase 1 K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CpP54B96_1548 uppS2; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CpP54B96_1265 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CpP54B96_0297 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CpP54B96_1116 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CpP54B96_1990 ubiA; 4-hydroxybenzoate polyprenyltransferase-related prenyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:cpp01007]
D CpP54B96_0141 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0915 gltX1; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0972 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CpP54B96_0468 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CpP54B96_1787 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CpP54B96_0842 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CpP54B96_0690 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CpP54B96_1405 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CpP54B96_1621 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CpP54B96_2082 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CpP54B96_1807 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CpP54B96_1959 lysS1; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CpP54B96_1171 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CpP54B96_1183 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CpP54B96_1543 glyS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CpP54B96_2006 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CpP54B96_1305 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CpP54B96_1208 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CpP54B96_1168 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CpP54B96_0961 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CpP54B96_0962 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CpP54B96_1957 aspC; Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CpP54B96_1519 cobC; Cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_0126 pat; Phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_1381 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CpP54B96_1202 bioF; 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CpP54B96_0966 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CpP54B96_0988 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CpP54B96_0286 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CpP54B96_1456 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CpP54B96_0614 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cpp00194]
D CpP54B96_0861 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CpP54B96_0860 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CpP54B96_0859 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CpP54B96_0858 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CpP54B96_0857 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CpP54B96_0856 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CpP54B96_0855 atpE; ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CpP54B96_0854 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cpp03000]
D CpP54B96_1245 lysR1; Transcriptional activator protein lysR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CpP54B96_0895 lysG; LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CpP54B96_1251 gatR; Galactitol utilization operon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CpP54B96_1253 glpR; Glycerol-3-phosphate regulon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CpP54B96_0491 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CpP54B96_2007 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CpP54B96_0155 dgoR; Galactonate operon transcriptional repressor K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D CpP54B96_1096 acnR; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D CpP54B96_1726 Transcriptional regulator, LuxR family K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D CpP54B96_0081 marR; Multiple antibiotic resistance protein marR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CpP54B96_1926 hspR; Heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CpP54B96_1546 furB; Ferric uptake regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CpP54B96_0210 glxR; CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CpP54B96_0245 HTH-type transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D CpP54B96_0476 HTH-type transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D CpP54B96_1278 clgR; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D CpP54B96_1889 padR1; Transcription regulator padR K10947 K10947; PadR family transcriptional regulator
D CpP54B96_1237 dtxR; Diphtheria toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D CpP54B96_0450 mntR; DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CpP54B96_0496 birA; Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CpP54B96_0128 glcT; PtsGHI operon antiterminator K03480 glcT; transcriptional antiterminator
D CpP54B96_0511 whiB; Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CpP54B96_0206 whiB; Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CpP54B96_0540 whiB; Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CpP54B96_2138 parB; Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CpP54B96_1790 carD; Transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CpP54B96_0968 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CpP54B96_1557 hrcA; Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D CpP54B96_0164 deoR; Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator
D CpP54B96_1152 pyrR; Pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CpP54B96_2128 Hypothetical protein K07735 algH; putative transcriptional regulator
D CpP54B96_1248 nrdR; Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D CpP54B96_1423 mraZ; Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cpp03021]
D CpP54B96_0601 uvrB; UvrABC system protein B K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CpP54B96_0397 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CpP54B96_0325 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CpP54B96_0326 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CpP54B96_1143 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CpP54B96_1229 sigA; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D CpP54B96_1236 sigB; RNA polymerase sigma factor sigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CpP54B96_0537 sigH; RNA polymerase sigma-H factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CpP54B96_0427 sigD; RNA polymerase sigma-D factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CpP54B96_0177 sigC; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CpP54B96_0802 sigE; RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CpP54B96_0056 sigK; ECF family sigma factor K K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CpP54B96_1302 nusA; Transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA
D CpP54B96_1156 nusB; N utilization substance protein B (Protein nusB) K03625 nusB; transcription antitermination protein NusB
D CpP54B96_0310 nusG; Transcription anti-termination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CpP54B96_0732 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CpP54B96_0848 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cpp03019]
D CpP54B96_1614 rne; Ribonuclease E/G family K08300 rne; ribonuclease E [EC:3.1.26.12]
D CpP54B96_1357 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CpP54B96_1286 Ribonuclease j Rv2752c K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CpP54B96_1536 Guanyl-specific ribonuclease Sa3 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CpP54B96_1663 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CpP54B96_0822 deaD1; DEAD-box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CpP54B96_0725 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CpP54B96_1290 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CpP54B96_0848 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CpP54B96_1929 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CpP54B96_1837 groEL1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_0424 groEL; Chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_0698 pvdS; Transcriptional regulatory protein PvdS K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CpP54B96_1834 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CpP54B96_2129 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CpP54B96_1129 P-loop ATPase protein family K06958 rapZ; RNase adapter protein RapZ
D CpP54B96_1047 helY; ATP-dependent DNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D CpP54B96_1247 hrpA; ATP-dependent RNA helicase hrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D CpP54B96_0089 hrpB; ATP-dependent RNA helicase hrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cpp03011]
D CpP54B96_0944 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CpP54B96_1332 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CpP54B96_0356 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CpP54B96_0396 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CpP54B96_0377 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CpP54B96_2064 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CpP54B96_0338 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CpP54B96_0374 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CpP54B96_0409 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CpP54B96_0349 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CpP54B96_0395 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CpP54B96_0337 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CpP54B96_0394 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CpP54B96_0666 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CpP54B96_1291 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CpP54B96_1347 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CpP54B96_0359 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CpP54B96_0665 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CpP54B96_0354 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CpP54B96_1596 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CpP54B96_0312 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CpP54B96_0353 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CpP54B96_0350 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CpP54B96_0351 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CpP54B96_0368 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CpP54B96_0375 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CpP54B96_2062 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CpP54B96_0316 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CpP54B96_0311 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CpP54B96_0317 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CpP54B96_0408 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CpP54B96_0366 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CpP54B96_0379 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CpP54B96_0357 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CpP54B96_0398 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CpP54B96_0376 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CpP54B96_1340 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CpP54B96_0958 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CpP54B96_1613 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CpP54B96_0355 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CpP54B96_0352 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CpP54B96_0367 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CpP54B96_1612 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CpP54B96_0668 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CpP54B96_0358 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CpP54B96_0378 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CpP54B96_0669 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CpP54B96_0670 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CpP54B96_0667 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CpP54B96_2144 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CpP54B96_0957 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CpP54B96_1705 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CpP54B96_0713 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CpP54B96_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r12 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r09 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cpp03009]
D CpP54B96_1357 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CpP54B96_1663 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CpP54B96_1550 era; GTPase Era K03595 era; GTPase
D CpP54B96_1611 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D CpP54B96_1302 nusA; Transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA
D CpP54B96_1156 nusB; N utilization substance protein B (Protein nusB) K03625 nusB; transcription antitermination protein NusB
D CpP54B96_0310 nusG; Transcription anti-termination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CpP54B96_0693 ksgA; Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CpP54B96_1137 fmu; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CpP54B96_0933 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CpP54B96_1555 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CpP54B96_2140 gidB; Glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CpP54B96_1422 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CpP54B96_0689 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CpP54B96_0976 tlyA; Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CpP54B96_0796 rrmA; Ribosomal RNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CpP54B96_1786 SpoU rRNA Methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CpP54B96_2048 rluC; Ribosomal pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CpP54B96_0991 rluB; RNA pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CpP54B96_1399 rulD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CpP54B96_0421 rimI; Ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CpP54B96_1345 rimM; Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D CpP54B96_1647 ycaO; Uncharacterized protein ycaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D CpP54B96_1652 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D CpP54B96_1614 rne; Ribonuclease E/G family K08300 rne; ribonuclease E [EC:3.1.26.12]
D CpP54B96_1166 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CpP54B96_0822 deaD1; DEAD-box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CpP54B96_0533 rsgA; Ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CpP54B96_0993 engA; GTP-binding protein EngA K03977 engA; GTPase
D CpP54B96_1261 hflX; GTP-binding protein hflX K03665 hflX; GTPase
D CpP54B96_0851 ywlC; tRNA threonylcarbamoyladenosine biosynthesis protein YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CpP54B96_1188 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CpP54B96_1299 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CpP54B96_1303 rimP; Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D CpP54B96_0094 yaaA; Uncharacterized protein yaaA K14761 rlbA; ribosome-associated protein
D CpP54B96_1604 Protein yqeL K09710 ybeB; ribosome-associated protein
D CpP54B96_1553 Metalloprotease K07042 ybeY; probable rRNA maturation factor
D CpP54B96_0756 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CpP54B96_1358 Metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cpp03016]
D CpP54B96_1536 Guanyl-specific ribonuclease Sa3 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CpP54B96_0141 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0915 gltX1; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_1305 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CpP54B96_1405 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CpP54B96_2082 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CpP54B96_0690 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CpP54B96_0842 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CpP54B96_1807 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CpP54B96_1959 lysS1; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CpP54B96_1171 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CpP54B96_1168 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CpP54B96_1543 glyS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CpP54B96_1208 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CpP54B96_2006 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CpP54B96_1787 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CpP54B96_1621 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CpP54B96_1183 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CpP54B96_0961 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CpP54B96_0962 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CpP54B96_0972 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CpP54B96_0468 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CpP54B96_1235 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CpP54B96_1056 pimT; SAM-dependent methyltransferase involved in tRNA-Met maturation K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D CpP54B96_1974 trmB; tRNA (guanine-N (7))-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CpP54B96_0399 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CpP54B96_1294 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CpP54B96_0875 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CpP54B96_0851 ywlC; tRNA threonylcarbamoyladenosine biosynthesis protein YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CpP54B96_1265 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CpP54B96_0644 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CpP54B96_2143 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CpP54B96_1683 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CpP54B96_1218 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CpP54B96_0536 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CpP54B96_0138 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CpP54B96_1270 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CpP54B96_1344 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CpP54B96_0451 spoU; tRNA/rRNA methyltransferase, SpoU K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CpP54B96_0960 tsnR; rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CpP54B96_2048 rluC; Ribosomal pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CpP54B96_0877 mnmA; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CpP54B96_1749 Glycine cleavage T protein K06980 ygfZ; tRNA-modifying protein YgfZ
D CpP54B96_0140 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CpP54B96_1824 tilS; tRNA(Ile)-lysidine synthase MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CpP54B96_0420 Hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CpP54B96_0422 gcp; tRNA threonylcarbamoyladenosine biosynthesis protein Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CpP54B96_0416 ydiB; UPF0079 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CpP54B96_1290 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cpp03012]
D CpP54B96_1300 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CpP54B96_0956 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CpP54B96_1331 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CpP54B96_0340 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CpP54B96_0339 fusA; Elongation factor G K02355 fusA; elongation factor G
D CpP54B96_0849 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CpP54B96_1329 frr; Ribosome-recycling factor (RRF) K02838 frr; ribosome recycling factor
D CpP54B96_0850 hemK; Protein methyltransferase hemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CpP54B96_0710 pth2; Peptidyl-tRNA hydrolase 2 K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CpP54B96_0712 pth1; Peptidyl-tRNA hydrolase 1 K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CpP54B96_0393 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CpP54B96_1157 efp; Elongation factor P K02356 efp; elongation factor P
D CpP54B96_0708 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cpp03110]
D CpP54B96_1907 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CpP54B96_1801 clpC; ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CpP54B96_1625 clpX; ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CpP54B96_1929 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CpP54B96_1837 groEL1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_0424 groEL; Chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_1556 dnaJ1; Chaperone protein dnaJ 1 K03686 dnaJ; molecular chaperone DnaJ
D CpP54B96_1927 dnaJ; Chaperone protein cofactor 1 K03686 dnaJ; molecular chaperone DnaJ
D CpP54B96_1928 grpE; Molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CpP54B96_1392 Ribosome-associated heat shock protein/S4 K04762 hslR; ribosome-associated heat shock protein Hsp15
D CpP54B96_0423 groES; Chaperonin K04078 groES; chaperonin GroES
D CpP54B96_1822 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CpP54B96_0854 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CpP54B96_1210 Lipoprotein K09796 pccA; periplasmic copper chaperone A
D CpP54B96_1659 Peptidase, S8A (subtilisin) family protein K14645 K14645; serine protease [EC:3.4.21.-]
D CpP54B96_0402 mycP; Subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CpP54B96_0020 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CpP54B96_1186 ppiB; Peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CpP54B96_2135 trxA1; Thioredoxin K03671 TXN; thioredoxin
D CpP54B96_2055 trxA1; Thioredoxin TrxA K03671 TXN; thioredoxin
D CpP54B96_0867 trxA; Thioredoxin TrxA K05838 ybbN; putative thioredoxin
D CpP54B96_1874 resA; Thiol-disulfide oxidoreductase resA K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:cpp04131]
D CpP54B96_1617 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CpP54B96_0705 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CpP54B96_1126 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CpP54B96_0262 gpmA; Phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CpP54B96_1369 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:cpp04121]
D CpP54B96_1053 pup; Prokaryotic ubiquitin-like protein pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cpp03051]
D CpP54B96_1052 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D CpP54B96_1051 pafB; Protein pafB K13572 pafB; proteasome accessory factor B
D CpP54B96_1050 pafC; Protein pafC K13573 pafC; proteasome accessory factor C
D CpP54B96_1054 pafA1; Proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cpp03032]
D CpP54B96_0001 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CpP54B96_2059 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CpP54B96_1534 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CpP54B96_1644 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_2063 ssb1; Single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_1396 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CpP54B96_0003 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CpP54B96_1599 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CpP54B96_0233 dnaX; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CpP54B96_0879 dnaQ2; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0161 dnaQ1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0911 dnaQ3; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_1388 polC; DNA polymerase III PolC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0149 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CpP54B96_1516 Bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CpP54B96_1338 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CpP54B96_0942 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CpP54B96_0880 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CpP54B96_0011 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CpP54B96_0006 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CpP54B96_0230 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cpp03036]
D CpP54B96_1357 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CpP54B96_2036 LSR2-like protein K26249 lsr2; nucleoid-associated protein Lsr2
D CpP54B96_0001 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CpP54B96_2077 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D CpP54B96_0895 lysG; LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CpP54B96_1353 smc; Chromosome partition protein smc K03529 smc; chromosome segregation protein
D CpP54B96_0984 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CpP54B96_0990 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CpP54B96_0589 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CpP54B96_1420 ftsI; Penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CpP54B96_1284 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CpP54B96_1412 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CpP54B96_1415 ftsW1; Cell division protein ftsW K03588 ftsW; cell division protein FtsW
D CpP54B96_0590 ftsX; Cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D CpP54B96_1411 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D CpP54B96_2136 cwlM; N-Acetymuramyl-L-Alanine Amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CpP54B96_1409 sepF; Cell division protein sepF K09772 sepF; cell division inhibitor SepF
D CpP54B96_2139 parA; Chromosome partitioning protein parA K03496 parA; chromosome partitioning protein
D CpP54B96_0983 soj; Chromosome partitioning ATPase protein K03496 parA; chromosome partitioning protein
D CpP54B96_2138 parB; Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CpP54B96_2140 gidB; Glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CpP54B96_1334 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CpP54B96_0982 xerD; Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD
D CpP54B96_0805 mrp; Protein mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CpP54B96_1127 whiA; Sporulation transcription regulator whiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cpp03400]
D CpP54B96_1310 ada; Methylated-DNA--protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CpP54B96_0929 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CpP54B96_1798 mutY; A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CpP54B96_0212 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CpP54B96_0601 uvrB; UvrABC system protein B K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CpP54B96_1858 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CpP54B96_1223 dut; Deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CpP54B96_0090 alkB; Alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D CpP54B96_0647 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CpP54B96_0091 tagA; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CpP54B96_2078 mutM2; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CpP54B96_1356 mutM1; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CpP54B96_0648 nei; DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CpP54B96_1854 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CpP54B96_0466 Endonuclease/Exonuclease/phosphatase family K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CpP54B96_0880 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CpP54B96_0942 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CpP54B96_0955 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CpP54B96_0949 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CpP54B96_1130 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CpP54B96_0549 uvrD; DNA helicase, UvrD/REP type K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0552 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0653 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_1484 Hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CpP54B96_0325 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CpP54B96_0326 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CpP54B96_0397 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CpP54B96_1143 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CpP54B96_0720 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CpP54B96_0752 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CpP54B96_0751 xseB; Exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CpP54B96_1396 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CpP54B96_0003 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CpP54B96_1599 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CpP54B96_0233 dnaX; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CpP54B96_0879 dnaQ2; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0161 dnaQ1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0911 dnaQ3; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_1388 polC; DNA polymerase III PolC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CpP54B96_0149 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CpP54B96_1644 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_2063 ssb1; Single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_1272 recA; Recombinase A K03553 recA; recombination protein RecA
D CpP54B96_1195 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D CpP54B96_1194 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CpP54B96_1196 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CpP54B96_1140 priA; Primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CpP54B96_1795 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CpP54B96_0004 recF; Recombination protein F K03629 recF; DNA replication and repair protein RecF
D CpP54B96_0931 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CpP54B96_1549 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D CpP54B96_0151 recR; Recombination protein recR K06187 recR; recombination protein RecR
D CpP54B96_0978 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CpP54B96_0011 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CpP54B96_0006 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CpP54B96_0230 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CpP54B96_1404 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CpP54B96_1250 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CpP54B96_1271 recX; Regulatory protein recX K03565 recX; regulatory protein
D CpP54B96_1690 dinG; ATP-dependent helicase dinG-like protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CpP54B96_0646 lhr; ATP-dependent helicase lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CpP54B96_0923 mutT2; 7,8-dihydro-8-oxoguanine-triphosphatase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D CpP54B96_0981 nudF; ADP-ribose pyrophosphatase (ADPRase) K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D CpP54B96_1702 nrdE; Ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CpP54B96_1699 nrdF2; Ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CpP54B96_1755 nrdF; Ribonucleoside-diphosphate reductase beta chain 2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CpP54B96_1298 DHH subfamily 1 protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cpp03029]
D CpP54B96_1300 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CpP54B96_0956 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CpP54B96_1331 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CpP54B96_0340 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CpP54B96_0339 fusA; Elongation factor G K02355 fusA; elongation factor G
D CpP54B96_1550 era; GTPase Era K03595 era; GTPase
D CpP54B96_0972 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CpP54B96_2082 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CpP54B96_1171 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CpP54B96_1543 glyS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CpP54B96_0842 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CpP54B96_0883 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CpP54B96_0892 gatB; Glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CpP54B96_0882 gatC; Aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CpP54B96_1644 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_2063 ssb1; Single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CpP54B96_1929 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CpP54B96_1928 grpE; Molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CpP54B96_1837 groEL1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_0424 groEL; Chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_0423 groES; Chaperonin K04078 groES; chaperonin GroES
D CpP54B96_1556 dnaJ1; Chaperone protein dnaJ 1 K03686 dnaJ; molecular chaperone DnaJ
D CpP54B96_1927 dnaJ; Chaperone protein cofactor 1 K03686 dnaJ; molecular chaperone DnaJ
D CpP54B96_0875 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CpP54B96_0805 mrp; Protein mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CpP54B96_1116 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CpP54B96_1115 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CpP54B96_2141 yidC1; Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_2042 oxaA; Hypothetical protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cpp02000]
D CpP54B96_0810 ABC transporter domain-containing ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CpP54B96_0760 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CpP54B96_1735 cydC; ATP-binding/permease protein cydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D CpP54B96_1734 cydD; ATP-binding/permease protein cydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D CpP54B96_0695 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CpP54B96_0187 potD; Spermidine/putrescine-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D CpP54B96_0186 potC; Spermidine/putrescine transport system permease protein PotC K02011 afuB; iron(III) transport system permease protein
D CpP54B96_0185 potA; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CpP54B96_0105 opuAC; Glycine betaine-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CpP54B96_0060 opuBB; Choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D CpP54B96_0061 opuBD; Choline transport system permease protein opuBD K05846 opuBD; osmoprotectant transport system permease protein
D CpP54B96_0062 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CpP54B96_0387 malK; Glycerol-3-phosphate-transporting ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CpP54B96_0381 malE; Maltotriose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CpP54B96_0382 malF; Maltose transport system permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CpP54B96_0383 malG; Maltose transport system permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CpP54B96_0505 malE; Maltose/maltodextrin transport system substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D CpP54B96_0503 malF; Maltose transport system permease protein malF K10237 thuF; trehalose/maltose transport system permease protein
D CpP54B96_0502 malG; Maltose transport system permease protein malG K10238 thuG; trehalose/maltose transport system permease protein
D CpP54B96_0016 Periplasmic binding protein/LacI transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CpP54B96_0017 rbsC; Ribose transport system permease protein rbsC K02057 ABC.SS.P; simple sugar transport system permease protein
D CpP54B96_0018 rbsA; Ribose import ATP-binding protein RbsA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CpP54B96_1743 pstS; Phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CpP54B96_1742 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D CpP54B96_1740 pstB; Phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CpP54B96_0659 gluB; Glutamate-binding protein GluB K10005 gluB; glutamate transport system substrate-binding protein
D CpP54B96_0660 gluC; Glutamate transport system permease protein gluC K10006 gluC; glutamate transport system permease protein
D CpP54B96_0661 gluD; Glutamate transport system permease protein gluD K10007 gluD; glutamate transport system permease protein
D CpP54B96_0658 gluA; Glutamate ABC transporter domain-containing ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D CpP54B96_0442 metQ; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D CpP54B96_0443 metQ1; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D CpP54B96_0440 metI; Methionine import system permease protein metI K02072 metI; D-methionine transport system permease protein
D CpP54B96_0441 metN; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D CpP54B96_0939 pknD; Serine/threonine-protein kinase PknD K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CpP54B96_1860 glnH; ABC transporter glutamine-binding protein glnH K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CpP54B96_0938 ABC transporter domain-containing protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CpP54B96_0937 atrC; ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CpP54B96_0770 oppA3; Oligopeptide-binding protein oppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CpP54B96_0771 oppB3; Oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D CpP54B96_0772 oppC3; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D CpP54B96_0773 oppD2; Oligopeptide transport ATP-binding protein OppD K10823 oppF; oligopeptide transport system ATP-binding protein
D CpP54B96_0360 oppA1; Oligopeptide-binding protein oppA K13889 gsiB; glutathione transport system substrate-binding protein
D CpP54B96_0363 oppB1; Oligopeptide transport system permease protein oppB K13890 gsiC; glutathione transport system permease protein
D CpP54B96_0362 oppC1; Oligopeptide transport system permease protein oppC K13891 gsiD; glutathione transport system permease protein
D CpP54B96_0361 oppDF1; Oligopeptide transport ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D CpP54B96_1190 oppA4; Oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CpP54B96_0634 oppA2; Oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CpP54B96_1577 oppA5; ABC-type dipeptide transport system, periplasmic componen K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CpP54B96_2098 oppA7; Oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CpP54B96_0635 oppB2; Oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_1578 oppB4; Oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_1588 Hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_1937 oppB5; Oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_2099 oppB6; Oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CpP54B96_0636 oppC2; Oligopeptide transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CpP54B96_1579 oppC4; Oligopeptide transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CpP54B96_1936 oppCD1; Oligopeptide transport system permease protein oppC K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_2100 oppCD2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_1592 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_0637 oppD1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_1580 oppDF2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CpP54B96_1935 oppD3; Oligopeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CpP54B96_2101 oppF; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CpP54B96_0458 hmuT; Hemin-binding periplasmic protein hmuT K25132 hmuT; heme transport system substrate-binding protein
D CpP54B96_0459 hmuU; Hemin import ATP-binding protein K25133 hmuU; heme transport system permease protein
D CpP54B96_0460 hmuV; Hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D CpP54B96_0035 fagD; Iron siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CpP54B96_0034 fagA; Hypothetical protein K23186 fepD; iron-siderophore transport system permease protein
D CpP54B96_0033 fagB; Iron-enterobactin transporter K23187 fepG; iron-siderophore transport system permease protein
D CpP54B96_0032 fagC; ATP binding cytoplasmic membrane protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CpP54B96_0594 fecB; Periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CpP54B96_0596 fecC; ABC transporter iron (III) K25283 yclO; iron-siderophore transport system permease protein
D CpP54B96_0595 fecCD; FecCD family membrane transport protein K25284 yclN; iron-siderophore transport system permease protein
D CpP54B96_0597 fecE; Fe(3+) dicitrate transport ATP-binding protein FecE K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CpP54B96_0047 znuA; Zinc ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CpP54B96_0293 ABC-type transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CpP54B96_0890 fhuD; Iron(3+)-hydroxamate-binding protein fhuD K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CpP54B96_1947 ABC transporter domain-containing permease component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CpP54B96_0998 ciuA; Iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CpP54B96_0999 ciuB; Iron ABC transporter domain-containing permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CpP54B96_0049 fecD; Fe(3+) dicitrate transport system permease protein fecD K02015 ABC.FEV.P; iron complex transport system permease protein
D CpP54B96_0294 Membrane permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CpP54B96_0888 fhuG; Iron(3+)-hydroxamate import system permease protein fhuG K02015 ABC.FEV.P; iron complex transport system permease protein
D CpP54B96_1946 Iron(III) dicitrate transport system permease fecD K02015 ABC.FEV.P; iron complex transport system permease protein
D CpP54B96_0870 fepC1; Ferric enterobactin transport ATP-binding protein FepC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CpP54B96_0048 fecE; Fe(3+) dicitrate transport ATP-binding protein FecE K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CpP54B96_0292 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CpP54B96_0889 fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CpP54B96_1001 ciuD; Iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CpP54B96_1945 phuC; Iron(III) dicitrate transport permease-like protein yusV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CpP54B96_2001 yvrC; ABC transporter substrate-binding lipoprotein yvrC K25034 btuF; cobalamin transport system substrate-binding protein
D CpP54B96_2000 ABC-type cobalamin/Fe3+-siderophores transport system, permease component K25027 btuC; cobalamin transport system permease protein
D CpP54B96_1999 potA; Spermidine/putrescine import ATP-binding protein PotA K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CpP54B96_0120 troA; Periplasmic zinc-binding protein troA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CpP54B96_0118 mntC; Manganese/zinc/iron transport system K11708 troC; manganese/zinc/iron transport system permease protein
D CpP54B96_0119 mntD; Manganese/zinc/iron transport system permease protein K11709 troD; manganese/zinc/iron transport system permease protein
D CpP54B96_0117 mntB; Manganese/zinc/iron transport system ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CpP54B96_0322 mntD; Manganese transport system membrane protein mntD K09819 ABC.MN.P; manganese/iron transport system permease protein
D CpP54B96_0321 mntB; Manganese transport system ATP-binding protein MntB K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D CpP54B96_1274 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CpP54B96_1276 bioN; Cobalt transport protein cbiQ K16783 bioN; biotin transport system permease protein
D CpP54B96_1275 bioM; Cobalt import ATP-binding protein CbiO K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CpP54B96_0767 cbiQ; Cobalt transport protein CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D CpP54B96_0766 ykoD; HMP/thiamine import ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CpP54B96_0765 ykoE; HMP/thiamine permease protein ykoE K16925 ykoE; energy-coupling factor transport system permease protein
D CpP54B96_0446 Manganese ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CpP54B96_0449 mntD; Manganese ABC transporter membrane protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D CpP54B96_0448 mntC; Manganese ABC transporter membrane protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D CpP54B96_0447 mntB; Manganese ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D CpP54B96_0123 rfbD; O-antigen export system ATP-binding protein RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D CpP54B96_0122 rfbE; O-antigen export system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CpP54B96_2087 ABC transporter inner membrane protein K09813 hrtB; hemin transport system permease protein
D CpP54B96_2086 ABC-type antimicrobial peptide transport system, ATPase component K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CpP54B96_0590 ftsX; Cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D CpP54B96_0589 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CpP54B96_0331 ABC transporter inner membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CpP54B96_1114 Hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CpP54B96_1653 Hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CpP54B96_1909 Transport protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CpP54B96_0199 yhaP; Protein yhaP K01992 ABC-2.P; ABC-2 type transport system permease protein
D CpP54B96_1885 yxlG; ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CpP54B96_1856 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CpP54B96_1908 ABC transporter domain-containing ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CpP54B96_1886 yxlF; ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CpP54B96_2051 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CpP54B96_1113 nodI; Nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CpP54B96_1654 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CpP54B96_1857 ABC superfamily ATP binding cassette transporter protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CpP54B96_1722 ABC-type antimicrobial peptide transport system K02004 ABC.CD.P; putative ABC transport system permease protein
D CpP54B96_1493 ABC transporter inner membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CpP54B96_1916 macB; Macrolide export ATP-binding/permease protein macB K02004 ABC.CD.P; putative ABC transport system permease protein
D CpP54B96_1723 ABC superfamily ATP binding cassette transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CpP54B96_1492 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CpP54B96_1917 ATP-bindingABC transporter domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CpP54B96_1108 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CpP54B96_2124 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CpP54B96_0127 sdcS; Sodium-dependent dicarboxylate transporter sdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D CpP54B96_0629 norM; Multidrug resistance protein norM K26939 norM; MATE family, multidrug efflux pump
D CpP54B96_1297 norM; Multidrug resistance protein norM K26937 dinF; MATE family, multidrug efflux pump
D CpP54B96_1997 glpT1; Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D CpP54B96_0188 glpT; Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D CpP54B96_0464 araJ; Arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CpP54B96_0166 MFS-type drug efflux transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CpP54B96_0481 lmrB; Lincomycin resistance protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D CpP54B96_0053 Major Facilitator Superfamily (MFS) K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CpP54B96_2028 Hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D CpP54B96_2058 MFS family major facilitator transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CpP54B96_1252 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CpP54B96_1257 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CpP54B96_0946 ptsG; Phosphotransferase system II Component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CpP54B96_1255 ptsF; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CpP54B96_1342 manP; PTS system mannose-specific EIIBCA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D CpP54B96_0087 sgaA; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CpP54B96_0088 ulaA; Ascorbate-specific permease IIC component ulaA K03475 ulaA; ascorbate PTS system EIIC component
D CpP54B96_1076 levD; Fructose-specific phosphotransferase enzyme IIA component K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D CpP54B96_0100 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CpP54B96_0550 trkA; Trk system potassium uptake protein trkA K10716 kch; voltage-gated potassium channel
D CpP54B96_0676 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CpP54B96_0901 mscS; Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D CpP54B96_1638 Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D CpP54B96_0050 mgtE1; Magnesium transporter mgtE K06213 mgtE; magnesium transporter
D CpP54B96_1026 corA; Magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D CpP54B96_1720 crcB1; Protein crcB 1 K06199 crcB; fluoride exporter
D CpP54B96_1721 crcB2; Protein crcB 2 K06199 crcB; fluoride exporter
D CpP54B96_1021 UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CpP54B96_1022 tlyC; Hemolysin-related protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CpP54B96_1552 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CpP54B96_0577 ansP; L-asparagine permease K11738 ansP; L-asparagine permease
D CpP54B96_0786 aroP1; Aromatic amino acid transport protein K16237 aroP; aromatic amino acid permease
D CpP54B96_0788 aroP2; Aromatic amino acid transport protein K16237 aroP; aromatic amino acid permease
D CpP54B96_0722 lysI; L-Lysine transport protein K03758 arcD; arginine:ornithine antiporter / lysine permease
D CpP54B96_0905 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CpP54B96_1976 mmpL; Transmembrane transport protein MmpL K20470 mmpL3; trehalose monomycolate/heme transporter
D CpP54B96_0251 Hypothetical protein K11742 mdtI; spermidine export protein MdtI
D CpP54B96_1397 rarD; RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D CpP54B96_1640 Hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CpP54B96_1501 Na+/H+ antiporter NhaC K07084 yuiF; putative amino acid transporter
D CpP54B96_0152 ygbN; Inner membrane permease ygbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CpP54B96_0142 gntP; Gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CpP54B96_1062 dcuA; Anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CpP54B96_0994 dcuB; Anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CpP54B96_0841 lutP; L-lactate permease K03303 lutP; lactate permease
D CpP54B96_0827 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter
D CpP54B96_0624 actP; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D CpP54B96_1828 dctA; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CpP54B96_1911 gltT; Sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CpP54B96_1766 trkH; Trk system potassium uptake protein trkH K03498 trkH; trk/ktr system potassium uptake protein
D CpP54B96_1765 trkA; Trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein
D CpP54B96_0610 pbuX; Xanthine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CpP54B96_0369 sdaC; Serine transporter K03837 sdaC; serine transporter
D CpP54B96_1842 mrpA1; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CpP54B96_0196 mrpA; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CpP54B96_0195 mrpC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CpP54B96_1843 mrpC1; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CpP54B96_1844 mrpD1; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CpP54B96_0194 mrpD; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CpP54B96_1845 mrpE1; Na(+)/H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CpP54B96_0193 mrpE; Na(+)/H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CpP54B96_1846 mrpF1; Na(+)/H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CpP54B96_1847 mrpG1; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CpP54B96_2132 Hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D CpP54B96_1576 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D CpP54B96_0894 lysE; Lysine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CpP54B96_1597 LysE type translocator K05835 rhtC; threonine efflux protein
D CpP54B96_2127 azlC; Branched-chain amino acid permease K26605 azlC; branched chain amino acid efflux pump
D CpP54B96_2126 azlD; Branched-chain amino acid transport protein K26606 azlD; branched chain amino acid efflux pump
D CpP54B96_0755 Hypothetical protein K20469 K20469; putative heme transporter
D CpP54B96_2044 Hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CpP54B96_1547 Hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D CpP54B96_0072 Fe(2+)/Mn(2+) transporter pcl1 K22736 VIT; vacuolar iron transporter family protein
D CpP54B96_1415 ftsW1; Cell division protein ftsW K03588 ftsW; cell division protein FtsW
D CpP54B96_0289 ccdA; Cytochrome c-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D CpP54B96_0274 dsbD; Thiol:disulfide interchange protein DsbD K06196 ccdA; cytochrome c-type biogenesis protein
D CpP54B96_0699 pnuC; Nicotinamide riboside transporter pnuC K03811 pnuC; nicotinamide mononucleotide transporter
D CpP54B96_1977 Hypothetical protein K20468 K20468; putative heme transporter
D CpP54B96_1211 copC; Copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cpp02044]
D CpP54B96_1163 Hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CpP54B96_0222 gspE; GSPII_E, type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CpP54B96_0223 Hypothetical protein K12510 tadB; tight adherence protein B
D CpP54B96_1408 yggT; YggT K02221 yggT; YggT family protein
D CpP54B96_1601 DNA uptake protein, SLBB domain protein K02237 comEA; competence protein ComEA
D CpP54B96_1600 comE; Competence protein ComE-like protein K02238 comEC; competence protein ComEC
D CpP54B96_0404 eccC3; ESX-3 secretion system protein eccC3 K27086 eccC; ESX secretion system protein EccC
D CpP54B96_0402 mycP; Subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CpP54B96_0407 esxT; ESAT-6-like protein K14956 esx; ESAT-6 family protein
D CpP54B96_0406 WXG domain-containing protein K14956 esx; ESAT-6 family protein
D CpP54B96_0527 secA; Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CpP54B96_1014 secA2; Protein translocase subunit secA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CpP54B96_1192 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D CpP54B96_0309 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CpP54B96_1191 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D CpP54B96_1122 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D CpP54B96_0388 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D CpP54B96_1348 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CpP54B96_1351 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D CpP54B96_1193 secN; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CpP54B96_2141 yidC1; Inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_2042 oxaA; Hypothetical protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CpP54B96_1049 tatA; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D CpP54B96_0804 tatB; Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB
D CpP54B96_1048 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cpp02042]
D CpP54B96_1021 UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CpP54B96_1022 tlyC; Hemolysin-related protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CpP54B96_1552 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CpP54B96_1756 Hemolysin III-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cpp02022]
D CpP54B96_0189 mprA; Response regulator mprA K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CpP54B96_0263 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CpP54B96_0264 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CpP54B96_0672 tcsS4; Two component system sensor kinase protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CpP54B96_0671 tcsR4; Two component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D CpP54B96_0523 mtrB; Sensor histidine kinase mtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CpP54B96_0522 mtrA; DNA-binding response regulator mtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CpP54B96_1770 mtrB; Sensor histidine kinase mtrB K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CpP54B96_0190 senX3; Sensor-like histidine kinase senX3 K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CpP54B96_1771 mprA; Response regulator mprA K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:cpp02035]
D CpP54B96_1163 Hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CpP54B96_0222 gspE; GSPII_E, type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cpp04812]
D CpP54B96_1411 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D CpP54B96_2139 parA; Chromosome partitioning protein parA K03496 parA; chromosome partitioning protein
D CpP54B96_0983 soj; Chromosome partitioning ATPase protein K03496 parA; chromosome partitioning protein
D CpP54B96_2138 parB; Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cpp04147]
D CpP54B96_0725 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CpP54B96_0705 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CpP54B96_1126 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CpP54B96_1125 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CpP54B96_1369 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CpP54B96_0020 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CpP54B96_1837 groEL1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_0424 groEL; Chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CpP54B96_1929 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CpP54B96_0650 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CpP54B96_0430 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CpP54B96_0431 guaB2; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CpP54B96_0340 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CpP54B96_0306 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_2023 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CpP54B96_2124 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CpP54B96_1560 fadD15; Long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_0260 lcfA1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CpP54B96_0520 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CpP54B96_0389 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CpP54B96_1189 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CpP54B96_0970 argH; Argininosuccinase lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CpP54B96_0969 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CpP54B96_1513 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CpP54B96_0821 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CpP54B96_0868 glgB; Glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CpP54B96_0099 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CpP54B96_1509 glnA2; Glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_1468 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CpP54B96_0280 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CpP54B96_0908 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CpP54B96_0657 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CpP54B96_0244 lpd; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CpP54B96_0874 etfA; Electron transfer flavo protein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CpP54B96_1119 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CpP54B96_1124 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CpP54B96_0262 gpmA; Phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cpp02048]
D CpP54B96_0029 cas5; CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD
D CpP54B96_1481 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CpP54B96_1059 vapI; Virulence-associated protein I K21498 higA-1; antitoxin HigA-1
D CpP54B96_1411 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D CpP54B96_0141 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0915 gltX1; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CpP54B96_0875 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:cpp04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cpp01504]
D CpP54B96_0166 MFS-type drug efflux transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CpP54B96_0053 Major Facilitator Superfamily (MFS) K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CpP54B96_0997 Hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cpp03100]
D CpP54B96_t42 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CpP54B96_t02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CpP54B96_t03 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CpP54B96_t18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t21 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t07 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t08 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t38 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CpP54B96_t35 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CpP54B96_t44 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CpP54B96_t45 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CpP54B96_t30 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CpP54B96_t19 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CpP54B96_t22 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CpP54B96_t23 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CpP54B96_t24 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CpP54B96_t46 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CpP54B96_t49 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CpP54B96_t37 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CpP54B96_t29 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CpP54B96_t32 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CpP54B96_t39 tRNA-His K14226 tRNA-His; tRNA His
D CpP54B96_t01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CpP54B96_t41 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t20 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t04 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CpP54B96_t40 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CpP54B96_t47 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CpP54B96_t34 tRNA-Met K14230 tRNA-Met; tRNA Met
D CpP54B96_t15 tRNA-Met K14230 tRNA-Met; tRNA Met
D CpP54B96_t17 tRNA-Met K14230 tRNA-Met; tRNA Met
D CpP54B96_t43 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CpP54B96_t36 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CpP54B96_t11 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CpP54B96_t26 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CpP54B96_t06 pseudogene K14233 tRNA-Ser; tRNA Ser
D CpP54B96_t05 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CpP54B96_t09 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CpP54B96_t10 pseudogene K14233 tRNA-Ser; tRNA Ser
D CpP54B96_t12 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CpP54B96_t14 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CpP54B96_t48 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CpP54B96_t16 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CpP54B96_t13 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CpP54B96_t28 tRNA-Val K14237 tRNA-Val; tRNA Val
D CpP54B96_t31 tRNA-Val K14237 tRNA-Val; tRNA Val
D CpP54B96_t33 tRNA-Val K14237 tRNA-Val; tRNA Val
D CpP54B96_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r12 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r09 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CpP54B96_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CpP54B96_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CpP54B96_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CpP54B96_0145 idnO; Gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D CpP54B96_0144 idnD; Zinc-binding alcohol dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D CpP54B96_0108 Decaprenylphosphoryl-D-2-keto erythropentose reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D CpP54B96_0621 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D CpP54B96_0893 yghZ; Aldo-keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D CpP54B96_0109 dprE1; Decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CpP54B96_0307 FAD-linked oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D CpP54B96_0479 lpdA; Flavoprotein disulfide reductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CpP54B96_1317 Mycothione/glutathione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D CpP54B96_2024 msrA; Peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CpP54B96_1215 msrB; Peptide methionine sulfoxide reductase msrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CpP54B96_1209 Dyp-type peroxidase family protein K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D CpP54B96_1670 bcp; Bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CpP54B96_1185 tpx; Thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CpP54B96_1242 ahpD; Alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D CpP54B96_1243 ahpC; Alkyl hydroperoxide reductase subunit C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D CpP54B96_1633 Pirin C-terminal domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CpP54B96_0633 tauD; Alpha-ketoglutarate-dependent taurine dioxygenase K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39]
D CpP54B96_1668 Antibiotic biosynthesis monooxygenase K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D CpP54B96_1701 ftn; Ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2]
D CpP54B96_1864 Ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CpP54B96_0775 arsC; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CpP54B96_0641 Glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D CpP54B96_0254 pflA; Pyruvate formate-lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CpP54B96_0334 nrdG; Anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CpP54B96_1029 ufaA; Cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CpP54B96_1744 mshD; Mycothiol biosynthesis acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D CpP54B96_1036 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CpP54B96_1968 Acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D CpP54B96_0607 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CpP54B96_0261 mshA; D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D CpP54B96_1370 lgt; Prolipoprotein diacylglyceryltransferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CpP54B96_0930 daK2; Dihydroxyacetone kinase 2 K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CpP54B96_1508 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CpP54B96_0813 lipT; Carboxylesterase, LipT K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CpP54B96_1984 Cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D CpP54B96_1642 Thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CpP54B96_1603 gpmB; Phosphoglycerate mutase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D CpP54B96_0691 tatD; TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CpP54B96_0863 Hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D CpP54B96_0198 Hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D CpP54B96_1852 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CpP54B96_1139 def1; Peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CpP54B96_0780 mshB; MshB deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D CpP54B96_0734 mca; Mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D CpP54B96_1920 UPF0012 hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CpP54B96_2079 Carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CpP54B96_1068 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D CpP54B96_0618 accDA; Acetyl-CoA carboxylase carboxyl transferase K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D CpP54B96_1981 accD; Propionyl-CoA carboxylase beta chain 5 K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-]
C 99981 Carbohydrate metabolism
D CpP54B96_0840 lutA; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CpP54B96_0839 lutB; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CpP54B96_0838 Hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CpP54B96_1106 nifU; NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D CpP54B96_0873 etfB; Electron transfer flavo protein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CpP54B96_1662 Short chain dehydrogenase K27306 cmrA; mycolic acid reductase
C 99984 Nucleotide metabolism
D CpP54B96_1754 nrdI; Ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction
D CpP54B96_1703 nrdI; Protein nrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D CpP54B96_0603 rpfA; Resuscitation-promoting factor K21687 rpfA; resuscitation-promoting factor RpfA
D CpP54B96_0692 rpfB; Resuscitation-promoting factor RpfB K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
D CpP54B96_1313 chlI; Magnesium chelatase subunit D K13580 K13580; magnesium chelatase subunit ChlD-like protein
D CpP54B96_0587 abgT; Aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D CpP54B96_1785 Poly(3-hydroxyalkanoate) depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
D CpP54B96_0916 lpqC; Poly(3-hydroxybutyrate) depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
D CpP54B96_2027 Flavin reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D CpP54B96_0683 mhqP; Oxidoreductase mhqP K15977 K15977; putative oxidoreductase
D CpP54B96_0897 Hypothetical protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CpP54B96_0605 cspB; Cold shock protein B K03704 cspA; cold shock protein
D CpP54B96_0229 cspA; Cold-shock protein K03704 cspA; cold shock protein
D CpP54B96_1341 Transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CpP54B96_1688 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CpP54B96_1629 tig; Trigger factor K03545 tig; trigger factor
D CpP54B96_1951 ureE; Urease accessory protein UreE K03187 ureE; urease accessory protein
D CpP54B96_1950 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein
D CpP54B96_1949 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein
D CpP54B96_1948 ureD; Urease accessory protein UreD K03190 ureD; urease accessory protein
D CpP54B96_0591 smpB; SsrA-binding protein/SmpB superfamily K03664 smpB; SsrA-binding protein
D CpP54B96_1704 nrdH; Glutaredoxin-like protein nrdH K06191 nrdH; glutaredoxin-like protein NrdH
D CpP54B96_1336 ATP-dependent protease K07391 comM; magnesium chelatase family protein
D CpP54B96_0290 ccsB; Cytochrome C biosynthesis protein ResB K07399 resB; cytochrome c biogenesis protein
D CpP54B96_1876 resB; Cytochrome c biogenesis protein resB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D CpP54B96_0096 ogt; Methylated-DNA--protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D CpP54B96_1483 Hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D CpP54B96_1058 recB; RecB family nuclease K07465 K07465; putative RecB family exonuclease
D CpP54B96_1335 Rossmann-fold nucleotide-binding protein/SMF K04096 smf; DNA processing protein
D CpP54B96_1169 putative AAA domain-containing protein Rv2559c/MT2636 K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D CpP54B96_1277 pspA; Phage shock protein A (IM30) K03969 pspA; phage shock protein A
D CpP54B96_0150 ybaB; UPF0133 protein ybaB K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CpP54B96_0987 yclF; putative transporter yclF K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CpP54B96_1939 pitB; Phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CpP54B96_0818 Sodium/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CpP54B96_1355 Na+/alanine symporter family K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CpP54B96_1571 brnQ; Branched-chain amino acid uptake carrier, ABC transporter domain-containing protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CpP54B96_2020 yutK; Nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D CpP54B96_0418 AspT/YidE/YbjL antiporter duplication domain-containing protein K07085 K07085; putative transport protein
D CpP54B96_1609 Transport YidE/YbjL family protein K07085 K07085; putative transport protein
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D CpP54B96_1657 pcsA; Carbon starvation protein A K06200 cstA; carbon starvation protein
D CpP54B96_0778 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CpP54B96_1098 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D CpP54B96_1554 phoH; Phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CpP54B96_0910 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D CpP54B96_0070 Lysozyme M1 K07273 acm; lysozyme
D CpP54B96_1918 hlyD; Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D CpP54B96_1738 phoU; Phosphate uptake regulator K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CpP54B96_1865 Acetyltransferase K02348 elaA; ElaA protein
D CpP54B96_0228 DEAD-box ATP dependent DNA helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D CpP54B96_1639 glbO; Hemoglobin-like protein K06886 glbN; hemoglobin
D CpP54B96_0139 mmpL11; Hypothetical protein mmpL11 K06994 K06994; putative drug exporter of the RND superfamily
D CpP54B96_1110 sufB; FeS cluster assembly protein sufB K09014 sufB; Fe-S cluster assembly protein SufB
D CpP54B96_1109 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CpP54B96_0469 Ribonuclease BN-like family K07058 K07058; membrane protein
D CpP54B96_1037 fxsA; FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D CpP54B96_2039 Hypothetical protein K07146 K07146; UPF0176 protein
D CpP54B96_2075 Hypothetical protein K07146 K07146; UPF0176 protein
D CpP54B96_0824 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04750 phnB; PhnB protein
D CpP54B96_2076 Hypothetical protein K03975 dedA; membrane-associated protein
D CpP54B96_1174 Uncharacterized protein yhgE K01421 yhgE; putative membrane protein
D CpP54B96_2081 ABC-2 type transporter family protein K01421 yhgE; putative membrane protein
D CpP54B96_0940 Hypothetical protein K08974 K08974; putative membrane protein
D CpP54B96_1011 UPF0225 protein K09858 K09858; SEC-C motif domain protein
D CpP54B96_0759 phnA; Phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D CpP54B96_1975 Hypothetical protein K06860 K06860; putative heme uptake system protein
D CpP54B96_1559 Hypothetical protein K06867 K06867; uncharacterized protein
D CpP54B96_1598 Ankyrin domain-containing protein K06867 K06867; uncharacterized protein
D CpP54B96_1730 Acetyltransferase K06975 K06975; uncharacterized protein
D CpP54B96_0095 cfp30B; Antigen Cfp30B K06996 K06996; uncharacterized protein
D CpP54B96_0130 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K06996 K06996; uncharacterized protein
D CpP54B96_1707 Hypothetical protein K07005 K07005; uncharacterized protein
D CpP54B96_1497 pfoS; Regulatory protein K07035 K07035; uncharacterized protein
D CpP54B96_1172 Zinc metallopeptidase K07054 K07054; uncharacterized protein
D CpP54B96_1153 Epimerase family protein yfcH K07071 K07071; uncharacterized protein
D CpP54B96_0333 Permease K07089 K07089; uncharacterized protein
D CpP54B96_0086 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D CpP54B96_0935 Hypothetical protein K07090 K07090; uncharacterized protein
D CpP54B96_0203 ykuE; putative metallophosphoesterase ykuE K07098 K07098; uncharacterized protein
D CpP54B96_1868 Purine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D CpP54B96_1584 Hypothetical protein, YeeE/YedE family K07112 K07112; uncharacterized protein
D CpP54B96_0084 abrB; Ammonia monooxygenase K07120 K07120; uncharacterized protein
D CpP54B96_1677 Hypothetical protein K07148 K07148; uncharacterized protein
D CpP54B96_1517 Zn-ribbon protein K07164 K07164; uncharacterized protein
D CpP54B96_2142 Hypothetical protein K08998 K08998; uncharacterized protein
D CpP54B96_1017 Hypothetical protein K08999 K08999; uncharacterized protein
D CpP54B96_0727 Hypothetical protein K09009 K09009; uncharacterized protein
D CpP54B96_0204 yqeY; Uncharacterized protein yqeY K09117 K09117; uncharacterized protein
D CpP54B96_0559 UPF0182 protein K09118 K09118; uncharacterized protein
D CpP54B96_0776 Hypothetical protein K09146 K09146; uncharacterized protein
D CpP54B96_1099 UPF0210 protein K09157 K09157; uncharacterized protein
D CpP54B96_1282 YCII-related domain protein K09780 K09780; uncharacterized protein
D CpP54B96_0763 Hypothetical protein K09781 K09781; uncharacterized protein
D CpP54B96_1608 Hypothetical protein K09790 K09790; uncharacterized protein
D CpP54B96_0971 Hypothetical protein K09791 K09791; uncharacterized protein
D CpP54B96_1306 Hypothetical protein K09861 K09861; uncharacterized protein
D CpP54B96_2110 Hypothetical protein K09946 K09946; uncharacterized protein
D CpP54B96_1301 ylxR; putative nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 22, 2024