+F Repair protein KO #

  DNA Repair and Recombination Proteins - Coniophora puteana

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D CONPUDRAFT_54594 methylated-DNA--cysteine S-met K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CONPUDRAFT_53990 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E CONPUDRAFT_88511 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CONPUDRAFT_98512 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CONPUDRAFT_113454 DNA glycosylase K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E CONPUDRAFT_166169 DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E CONPUDRAFT_48745 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E CONPUDRAFT_36261 DNA glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E CONPUDRAFT_98771 DNA glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E CONPUDRAFT_79799 hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E CONPUDRAFT_106852 DNase I-like protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2] D Long Patch-BER factors E DNA polymerase delta complex F CONPUDRAFT_138364 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F CONPUDRAFT_141916 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2 F CONPUDRAFT_163601 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 F CONPUDRAFT_159228 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4 E DNA polymerase epsilon complex F CONPUDRAFT_169419 DUF1744-domain-containing protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] F CONPUDRAFT_54297 DNA polymerase epsilon, subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] F CONPUDRAFT_55834 histone-fold-containing protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] E CONPUDRAFT_146102 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen E CONPUDRAFT_72943 PIN domain-like protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E CONPUDRAFT_95536 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors E CONPUDRAFT_132911 Nucleotidyltransferase K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-] D Other BER factors E CONPUDRAFT_168639 phospholipase D nuclease K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] E CONPUDRAFT_117509 HIT-like protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E CONPUDRAFT_87778 PNK3P-domain-containing protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] E CONPUDRAFT_63239 hypothetical protein K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] E CONPUDRAFT_94713 PARP-domain-containing protein K28005 PARP2; poly [ADP-ribose] polymerase 2 [EC:2.4.2.30] C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex F CONPUDRAFT_153768 Rad4-domain-containing protein K10838 XPC; xeroderma pigmentosum group C-complementing protein F CONPUDRAFT_163894 UV excision repair protein Rad23 K10839 RAD23; UV excision repair protein RAD23 E Cul4-DDB2 complex F CONPUDRAFT_106740 RING/U-box K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F CONPUDRAFT_114196 Cullin-4B K10609 CUL4; cullin 4 F CONPUDRAFT_56293 hypothetical protein K10610 DDB1; DNA damage-binding protein 1 E NER4 complex F CONPUDRAFT_166892 RNI-like protein K15082 RAD7; DNA repair protein RAD7 F CONPUDRAFT_122767 hypothetical protein K15083 RAD16; DNA repair protein RAD16 D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex F CONPUDRAFT_148321 beta and beta-prime subunits of DNA dependent RNA-polymerase K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F CONPUDRAFT_116067 DNA-dependent RNA polymerase II second largest subunit K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] F CONPUDRAFT_101375 insert subdomain of RNA polymerase alpha subunit K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 F CONPUDRAFT_163398 RPB5 subunit of DNA-directed RNA polymerase K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 F CONPUDRAFT_116112 RNA polymerase Rpb6 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 F CONPUDRAFT_132203 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 F CONPUDRAFT_133976 RNA polymerase I K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 F CONPUDRAFT_90969 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 F CONPUDRAFT_91730 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 F CONPUDRAFT_31952 RBP11-like subunits of RNA polymerase K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 F CONPUDRAFT_81756 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E Cul4-CSA complex F CONPUDRAFT_106740 RING/U-box K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F CONPUDRAFT_114196 Cullin-4B K10609 CUL4; cullin 4 F CONPUDRAFT_56293 hypothetical protein K10610 DDB1; DNA damage-binding protein 1 E Other TCR factor F CONPUDRAFT_134997 Elf1-domain-containing protein K25829 ELOF1; transcription elongation factor 1 D TFIIH complex E CONPUDRAFT_163404 DNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E CONPUDRAFT_98012 DNA repair helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E CONPUDRAFT_163808 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 E CONPUDRAFT_89143 Ssl1-domain-containing protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E CONPUDRAFT_136362 transcription factor Tfb4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E CONPUDRAFT_119096 transcription factor Tfb2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E CONPUDRAFT_163037 transcription factor Tfb2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E CONPUDRAFT_127150 Pkinase-domain-containing protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E CONPUDRAFT_95224 cyclin-like protein K06634 CCNH; cyclin H E CONPUDRAFT_135146 CDK-activating kinase assembly factor K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D RPA (replication factor A) E CONPUDRAFT_117050 replication factor-A protein 1 K07466 RFA1; replication factor A1 E CONPUDRAFT_55972 replication protein A subunit RPA32 K10739 RFA2; replication factor A2 E CONPUDRAFT_79824 replication protein A subunit RPA32 K10739 RFA2; replication factor A2 D Other NER factors E CONPUDRAFT_86400 hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells E CONPUDRAFT_143024 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1 E CONPUDRAFT_140757 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E CONPUDRAFT_100293 hypothetical protein K10846 ERCC5; DNA excision repair protein ERCC-5 E CONPUDRAFT_95536 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E CONPUDRAFT_126992 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19 E CONPUDRAFT_129163 WD40 repeat-like protein K24730 CIAO1; cytosolic iron-sulfur protein assembly protein CIAO1 E CONPUDRAFT_98537 FAM96B protein K26403 CIAO2; cytosolic iron-sulfur assembly component 2 E CONPUDRAFT_119268 Cullin-domain-containing protein K03869 CUL3; cullin 3 E CONPUDRAFT_169436 POZ domain-containing protein K03872 ELOC; elongin-C C MMR (mismatch excision repair) D Mismatch and loop recognition factors E CONPUDRAFT_168162 DNA mismatch repair protein K08735 MSH2; DNA mismatch repair protein MSH2 E CONPUDRAFT_69938 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3 E CONPUDRAFT_156614 DNA mismatch repair protein Msh6 K08737 MSH6; DNA mismatch repair protein MSH6 D MutL homologs E CONPUDRAFT_168195 DNA mismatch repair protein MutL K08734 MLH1; DNA mismatch repair protein MLH1 E CONPUDRAFT_61519 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2 E CONPUDRAFT_89709 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3 D DNA polymerase delta complex E CONPUDRAFT_138364 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E CONPUDRAFT_141916 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2 E CONPUDRAFT_163601 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 E CONPUDRAFT_159228 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4 D RPA (replication factor A) E CONPUDRAFT_117050 replication factor-A protein 1 K07466 RFA1; replication factor A1 E CONPUDRAFT_55972 replication protein A subunit RPA32 K10739 RFA2; replication factor A2 E CONPUDRAFT_79824 replication protein A subunit RPA32 K10739 RFA2; replication factor A2 D RFC (replication factor C) E CONPUDRAFT_102491 DNA replication factor C, large subunit K10754 RFC1; replication factor C subunit 1 E CONPUDRAFT_116118 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4 E CONPUDRAFT_134811 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4 E CONPUDRAFT_163961 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5 E CONPUDRAFT_60117 DNA replication factor K10756 RFC3_5; replication factor C subunit 3/5 D Other MMR factors E CONPUDRAFT_146102 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen E CONPUDRAFT_60868 PIN domain-like protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-] E CONPUDRAFT_95536 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E CONPUDRAFT_162404 WD40 repeat-like protein K24755 WDR76; WD repeat-containing protein 76 B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex E CONPUDRAFT_155242 DNA repair exonuclease K10865 MRE11; double-strand break repair protein MRE11 D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex E CONPUDRAFT_155242 DNA repair exonuclease K10865 MRE11; double-strand break repair protein MRE11 D BRCA complex D RecA family proteins E CONPUDRAFT_142527 hypothetical protein K10871 RAD51L3; RAD51-like protein 3 D Rad52 family proteins E CONPUDRAFT_60304 Rad52 22 double-strand break repair protein K10873 RAD52; DNA repair and recombination protein RAD52 D Rad54 family proteins E CONPUDRAFT_87609 DNA repair protein, SNF2 family K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] E CONPUDRAFT_101343 hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-] D RecQ family DNA helicases E CONPUDRAFT_113436 ATP-dependent DNA helicase K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4] E CONPUDRAFT_110321 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4] D Bloom's syndrome complex (BTR) E CONPUDRAFT_110321 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E CONPUDRAFT_53217 prokaryotic type I DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E CONPUDRAFT_50851 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1 D RPA (replication factor A) E CONPUDRAFT_117050 replication factor-A protein 1 K07466 RFA1; replication factor A1 E CONPUDRAFT_55972 replication protein A subunit RPA32 K10739 RFA2; replication factor A2 E CONPUDRAFT_79824 replication protein A subunit RPA32 K10739 RFA2; replication factor A2 D Protein phosphatase 4 E CONPUDRAFT_85031 serine threonine protein phosphatase K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] E CONPUDRAFT_48322 ARM repeat-containing protein K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1 E CONPUDRAFT_69976 hypothetical protein K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2 E CONPUDRAFT_154374 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3 E CONPUDRAFT_64248 DUF625-domain-containing protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3 D AP-5 complex D SMC5-SMC6 complex E CONPUDRAFT_168836 P-loop containing nucleoside triphosphate hydrolase protein K22803 SMC5; structural maintenance of chromosomes protein 5 E CONPUDRAFT_123676 P-loop containing nucleoside triphosphate hydrolase protein K22804 SMC6; structural maintenance of chromosomes protein 6 E CONPUDRAFT_117389 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] E CONPUDRAFT_56154 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] E CONPUDRAFT_100999 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4 D Other HR factors E CONPUDRAFT_151045 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 E CONPUDRAFT_149340 hypothetical protein K10991 SWI5; DNA repair protein Swi5/Sae3 E CONPUDRAFT_128086 PIN domain-like protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E CONPUDRAFT_146515 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E CONPUDRAFT_109102 MRG-domain-containing protein K11339 MORF4L1; mortality factor 4-like protein 1 E CONPUDRAFT_127244 HD-domain PDEase-like protein K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E CONPUDRAFT_152681 HD-domain PDEase-like protein K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E CONPUDRAFT_151735 hypothetical protein K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7 E CONPUDRAFT_150926 WLM-domain-containing protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E CONPUDRAFT_96390 WLM-domain-containing protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E CONPUDRAFT_95054 P-loop containing nucleoside triphosphate hydrolase protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4] C NHEJ (non-homologous end-joining) D DNA-PK complex E CONPUDRAFT_118992 Ku DNA-binding complex, Ku70 subunit K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 E CONPUDRAFT_140912 SPOC domain-like protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 D MRX complex E CONPUDRAFT_155242 DNA repair exonuclease K10865 MRE11; double-strand break repair protein MRE11 D DNA Ligase 4 complex E CONPUDRAFT_127064 DNA ligase/mRNA capping enzyme K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] E CONPUDRAFT_83539 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] D X-family DNA polymerases E CONPUDRAFT_63239 hypothetical protein K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] E CONPUDRAFT_144486 Nucleotidyltransferase K03513 POLM; DNA polymerase mu [EC:2.7.7.7] E CONPUDRAFT_132911 Nucleotidyltransferase K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-] D Other NHEJ factors E CONPUDRAFT_117509 HIT-like protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E CONPUDRAFT_169911 hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-] E CONPUDRAFT_144342 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] E CONPUDRAFT_71080 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] E CONPUDRAFT_92468 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) E CONPUDRAFT_110321 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E CONPUDRAFT_53217 prokaryotic type I DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E CONPUDRAFT_50851 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1 D FANCD2-I complex D Downstream FA components D Other FA pathway factors E CONPUDRAFT_79583 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1] E CONPUDRAFT_98109 hypothetical protein K11137 TELO2; telomere length regulation protein E CONPUDRAFT_167777 WD40 repeat-like protein K15361 WDR48; WD repeat-containing protein 48 C Other DSBR factors D Protein phosphatase 6 E CONPUDRAFT_140304 serine threonine specific protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16] D Ubiquitin ligases D Others E CONPUDRAFT_168677 WD40 repeat-like protein K23314 WRAP53; telomerase Cajal body protein 1 E CONPUDRAFT_44091 WD40 repeat-like protein K24752 WDR70; WD repeat-containing protein 70 E CONPUDRAFT_162404 WD40 repeat-like protein K24755 WDR76; WD repeat-containing protein 76 B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D CONPUDRAFT_151238 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7] D CONPUDRAFT_136219 IMS-domain-containing protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7] D CONPUDRAFT_87988 DNA repair protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] C B-family DNA polymerases D CONPUDRAFT_95484 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7] C A-family DNA polymerase C Rad6 epistasis group D CONPUDRAFT_112746 ubiquitin-conjugating enzyme K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D CONPUDRAFT_162684 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27] D CONPUDRAFT_45428 hypothetical protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-] D CONPUDRAFT_151759 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] D CONPUDRAFT_155506 UBC-like protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant D CONPUDRAFT_131896 ubiquitin-conjugating enzyme K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] C Other TLS factors D CONPUDRAFT_146102 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D CONPUDRAFT_46822 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein B Check point factors C Rad9-Hus1-Rad1 complex D CONPUDRAFT_136125 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2] D CONPUDRAFT_119032 cell cycle checkpoint K10903 HUS1; HUS1 checkpoint protein D CONPUDRAFT_98583 Rad1-domain-containing protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C HRAD17(Rad24)-RFC complex D CONPUDRAFT_167507 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein D CONPUDRAFT_116118 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4 D CONPUDRAFT_134811 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4 D CONPUDRAFT_163961 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5 D CONPUDRAFT_60117 DNA replication factor K10756 RFC3_5; replication factor C subunit 3/5 C Rad17-Mec3-Ddc1 complex D CONPUDRAFT_98583 Rad1-domain-containing protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C FPC (fork protection complex) D CONPUDRAFT_166483 timeless-domain-containing protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 D CONPUDRAFT_162403 Swi3-domain-containing protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3 D CONPUDRAFT_153372 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1 C Triple T complex D CONPUDRAFT_98109 hypothetical protein K11137 TELO2; telomere length regulation protein D CONPUDRAFT_115994 hypothetical protein K20403 TTI1; TELO2-interacting protein 1 C BAG6-UBL4A-GET4 complex D CONPUDRAFT_138712 hypothetical protein K23388 UBL4; ubiquitin-like protein 4 D CONPUDRAFT_118906 cytoplasmic protein K23387 GET4; golgi to ER traffic protein 4 C Other check point factors D CONPUDRAFT_158248 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] D CONPUDRAFT_74806 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D CONPUDRAFT_113983 CAMK CAMKL CHK1 protein kinase K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D CONPUDRAFT_75397 kinase-like protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1] D CONPUDRAFT_117322 hypothetical protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D CONPUDRAFT_136622 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon D CONPUDRAFT_92963 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon D CONPUDRAFT_122038 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_128608 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_150804 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_167751 Pkinase-domain-containing protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_18676 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_45738 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_48017 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_48372 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_49659 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_61693 kinase-like protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CONPUDRAFT_112253 hypothetical protein K20780 MDC1; mediator of DNA damage checkpoint protein 1 D CONPUDRAFT_101290 hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D CONPUDRAFT_114337 AAA-domain-containing protein K12196 VPS4; vacuolar protein-sorting-associated protein 4 D CONPUDRAFT_50655 hypothetical protein K25059 SDE2; replication stress response regulator SDE2 B Other factors with a suspected DNA repair function C DNA polymerases D CONPUDRAFT_47531 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7] C Nucleases D CONPUDRAFT_59746 DRMBL-domain-containing protein K15340 DCLRE1A; DNA cross-link repair 1A protein D CONPUDRAFT_141255 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-] D CONPUDRAFT_140505 phospholipase C P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] C Helicases D CONPUDRAFT_63659 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-] C PSO4 complex D CONPUDRAFT_133900 nuclear matrix protein NMP200 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D CONPUDRAFT_81237 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D CONPUDRAFT_161176 breast carcinoma amplified sequence 2 K12861 BCAS2; pre-mRNA-splicing factor SPF27 D CONPUDRAFT_113535 WD40 repeat-like protein K12862 PLRG1; pleiotropic regulator 1 C Modulation of nucleotide pools D CONPUDRAFT_63060 hypothetical protein K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56] D CONPUDRAFT_137002 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CONPUDRAFT_165419 ribonucleotide reductase alpha subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D CONPUDRAFT_54095 ribonucleotide reductase small subunit K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D CONPUDRAFT_54594 methylated-DNA--cysteine S-met K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CONPUDRAFT_53990 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E CONPUDRAFT_88511 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CONPUDRAFT_98512 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CONPUDRAFT_164034 DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E CONPUDRAFT_166169 DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E CONPUDRAFT_133823 S13-like H2TH domain-containing protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E CONPUDRAFT_36261 DNA glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E CONPUDRAFT_98771 DNA glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D RecJ D DNA ligase D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E CONPUDRAFT_163514 P-loop containing nucleoside triphosphate hydrolase protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase D Other MMR factors E CONPUDRAFT_163514 P-loop containing nucleoside triphosphate hydrolase protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins D RecFOR pathway proteins D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway E Facilitator E Supressor B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D CONPUDRAFT_137002 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 29, 2025