+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium pyruviciproducens
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cpyr00010]
D CYJ47_02770 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_04040 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_08620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYJ47_07355 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CYJ47_08155 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CYJ47_00780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYJ47_05720 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CYJ47_05710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CYJ47_05715 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CYJ47_10710 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CYJ47_08285 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYJ47_00070 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYJ47_04465 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYJ47_03650 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CYJ47_03940 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_01130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_10725 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_06800 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CYJ47_01850 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYJ47_05230 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CYJ47_11855 aldose epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D CYJ47_00370 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CYJ47_09580 family 1 glycosylhydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:cpyr00020]
D CYJ47_08710 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CYJ47_05930 can; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CYJ47_09505 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CYJ47_07890 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_01605 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CYJ47_10780 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CYJ47_10775 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CYJ47_10785 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CYJ47_08160 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CYJ47_03155 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CYJ47_04725 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CYJ47_09425 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CYJ47_00370 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CYJ47_03650 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CYJ47_03940 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cpyr00030]
D CYJ47_08620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYJ47_05765 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CYJ47_05755 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CYJ47_06295 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CYJ47_05655 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CYJ47_05775 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CYJ47_05770 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CYJ47_03065 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CYJ47_11985 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CYJ47_12515 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CYJ47_03330 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CYJ47_12500 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CYJ47_12540 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CYJ47_01850 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYJ47_08330 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CYJ47_02435 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D CYJ47_02650 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D CYJ47_09940 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D CYJ47_00780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYJ47_08155 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CYJ47_07355 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cpyr00040]
D CYJ47_02690 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D CYJ47_02440 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D CYJ47_02655 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D CYJ47_02685 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D CYJ47_02680 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D CYJ47_00590 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CYJ47_08475 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CYJ47_05655 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CYJ47_07155 FGGY-family carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CYJ47_12220 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cpyr00051]
D CYJ47_12125 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CYJ47_09275 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYJ47_09285 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_09440 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_11990 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_09305 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CYJ47_12220 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CYJ47_07355 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CYJ47_08155 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CYJ47_05110 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CYJ47_00780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYJ47_05720 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CYJ47_03065 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CYJ47_05105 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:cpyr00052]
D CYJ47_06800 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CYJ47_03780 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CYJ47_06780 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CYJ47_06785 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CYJ47_05170 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CYJ47_10835 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CYJ47_08475 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CYJ47_01850 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYJ47_02770 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_04040 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_00255 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CYJ47_12235 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CYJ47_12230 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CYJ47_12225 PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D CYJ47_07355 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CYJ47_00385 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CYJ47_07965 GH32 C-terminal domain-containing protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CYJ47_12120 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:cpyr00053]
D CYJ47_00590 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CYJ47_02680 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D CYJ47_12480 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CYJ47_12485 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
C 00500 Starch and sucrose metabolism [PATH:cpyr00500]
D CYJ47_12115 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CYJ47_00385 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CYJ47_07965 GH32 C-terminal domain-containing protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CYJ47_12120 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CYJ47_08475 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CYJ47_00205 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CYJ47_10860 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CYJ47_09580 family 1 glycosylhydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CYJ47_07955 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CYJ47_07500 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CYJ47_03445 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D CYJ47_03470 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CYJ47_07495 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D CYJ47_07960 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CYJ47_04375 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D CYJ47_04360 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D CYJ47_04330 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D CYJ47_01370 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CYJ47_01360 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CYJ47_01850 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYJ47_02770 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_04040 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_08620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYJ47_12125 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpyr00520]
D CYJ47_00470 glycoside hydrolase family 3 N-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CYJ47_12720 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CYJ47_02760 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CYJ47_02765 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CYJ47_12125 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CYJ47_04530 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CYJ47_10000 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CYJ47_08325 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CYJ47_01685 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CYJ47_10730 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CYJ47_02775 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D CYJ47_11800 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CYJ47_02925 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CYJ47_02770 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_04040 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_05230 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CYJ47_01850 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYJ47_08475 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CYJ47_00590 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CYJ47_06665 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D CYJ47_03780 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CYJ47_06780 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CYJ47_06785 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CYJ47_05170 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CYJ47_10835 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CYJ47_00255 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CYJ47_08620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYJ47_09275 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYJ47_09285 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_09440 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_11990 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_09305 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CYJ47_07955 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cpyr00620]
D CYJ47_03650 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CYJ47_03940 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_06265 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CYJ47_00835 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CYJ47_00830 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CYJ47_00070 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYJ47_04465 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYJ47_09420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CYJ47_04525 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CYJ47_01605 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CYJ47_01130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_10725 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_01405 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CYJ47_05460 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CYJ47_09425 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CYJ47_03155 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CYJ47_04725 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CYJ47_08160 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CYJ47_00370 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CYJ47_11380 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpyr00630]
D CYJ47_03155 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CYJ47_08710 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CYJ47_05930 can; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CYJ47_07520 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CYJ47_09420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CYJ47_09385 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CYJ47_05985 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CYJ47_03865 catalase K03781 katE; catalase [EC:1.11.1.6]
D CYJ47_03730 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CYJ47_03805 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_03890 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_08220 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CYJ47_03935 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CYJ47_03930 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_03925 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D CYJ47_04490 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CYJ47_07890 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:cpyr00640]
D CYJ47_00835 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CYJ47_00830 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_06265 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CYJ47_02405 MDR family oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CYJ47_09420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CYJ47_08935 methylmalonyl-CoA carboxytransferase subunit 5S K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D CYJ47_08925 hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D CYJ47_08930 acyl-CoA carboxylase subunit beta K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D CYJ47_08920 biotin/lipoyl-containing protein K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D CYJ47_09385 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CYJ47_07520 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CYJ47_05985 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CYJ47_01130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_10725 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cpyr00650]
D CYJ47_10780 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CYJ47_10775 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CYJ47_10785 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CYJ47_08610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CYJ47_01605 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CYJ47_06265 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CYJ47_07265 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYJ47_07260 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CYJ47_09495 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:cpyr00660]
D CYJ47_07265 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYJ47_07260 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CYJ47_09495 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CYJ47_07085 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CYJ47_07080 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CYJ47_07220 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cpyr00562]
D CYJ47_04435 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CYJ47_05235 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CYJ47_05720 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cpyr00190]
D CYJ47_05045 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CYJ47_05040 NADH-quinone oxidoreductase subunit B family protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CYJ47_05035 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CYJ47_05030 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CYJ47_05025 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CYJ47_05020 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CYJ47_05015 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CYJ47_05010 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CYJ47_05005 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CYJ47_05000 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CYJ47_04995 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CYJ47_04990 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CYJ47_04985 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CYJ47_04980 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CYJ47_10780 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CYJ47_10775 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CYJ47_10785 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CYJ47_04015 ubiquinol-cytochrome c reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CYJ47_04020 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D CYJ47_05780 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CYJ47_04000 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CYJ47_04005 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CYJ47_02515 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CYJ47_03995 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CYJ47_05795 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CYJ47_07555 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CYJ47_07545 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CYJ47_07550 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CYJ47_07560 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CYJ47_07540 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CYJ47_07575 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CYJ47_07565 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CYJ47_07570 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CYJ47_01010 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CYJ47_01000 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cpyr00680]
D CYJ47_08220 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CYJ47_08285 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYJ47_03155 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CYJ47_00780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYJ47_08155 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CYJ47_07355 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CYJ47_00835 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CYJ47_00830 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CYJ47_10710 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CYJ47_07225 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CYJ47_08715 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CYJ47_02520 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cpyr00910]
D CYJ47_07685 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CYJ47_07690 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_07695 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_07705 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_04495 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CYJ47_03805 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_03890 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_12395 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CYJ47_01290 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cpyr00920]
D CYJ47_05475 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CYJ47_08645 inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CYJ47_04805 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CYJ47_00755 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYJ47_09415 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYJ47_01645 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CYJ47_01650 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CYJ47_09535 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CYJ47_12635 DMSO/selenate family reductase complex A subunit K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D CYJ47_12630 DMSO/selenate family reductase complex B subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cpyr00061]
D CYJ47_09420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CYJ47_03640 acyl carrier protein K02078 acpP; acyl carrier protein
D CYJ47_13070 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CYJ47_03475 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYJ47_10720 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D CYJ47_03475 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYJ47_10720 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cpyr00561]
D CYJ47_04490 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CYJ47_12210 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D CYJ47_12205 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D CYJ47_03335 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CYJ47_06755 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D CYJ47_04045 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CYJ47_06880 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CYJ47_00285 alpha/beta hydrolase family protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CYJ47_06205 lipase family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CYJ47_06665 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:cpyr00564]
D CYJ47_07065 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CYJ47_03345 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CYJ47_04045 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CYJ47_06880 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CYJ47_00075 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CYJ47_07325 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CYJ47_07640 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CYJ47_04655 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CYJ47_04925 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CYJ47_05355 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CYJ47_00905 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cpyr00600]
D CYJ47_07335 sialidase family protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CYJ47_05385 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cpyr00230]
D CYJ47_01850 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYJ47_08330 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CYJ47_01535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CYJ47_01430 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CYJ47_08565 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CYJ47_00810 phosphoglycerate transporter K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CYJ47_07455 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CYJ47_01540 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CYJ47_09370 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CYJ47_09365 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CYJ47_01450 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CYJ47_01435 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CYJ47_08560 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CYJ47_05435 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CYJ47_09410 bifunctional UDP-sugar hydrolase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CYJ47_11995 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CYJ47_04195 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CYJ47_01110 nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D CYJ47_12530 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D CYJ47_01025 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CYJ47_09865 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CYJ47_09870 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CYJ47_03185 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CYJ47_02615 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CYJ47_05920 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CYJ47_09855 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CYJ47_04875 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7]
D CYJ47_05615 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CYJ47_02500 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CYJ47_06590 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CYJ47_02510 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CYJ47_06565 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CYJ47_03820 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CYJ47_03575 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CYJ47_05440 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CYJ47_08270 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CYJ47_10690 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CYJ47_10890 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CYJ47_00800 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CYJ47_11780 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CYJ47_10150 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CYJ47_05350 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D CYJ47_12395 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:cpyr00240]
D CYJ47_05600 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CYJ47_05595 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CYJ47_11460 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CYJ47_12415 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CYJ47_05590 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CYJ47_12420 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CYJ47_06020 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CYJ47_10990 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CYJ47_00765 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CYJ47_05605 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CYJ47_04645 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CYJ47_03185 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CYJ47_09400 nucleoside triphosphate pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CYJ47_11865 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CYJ47_06690 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CYJ47_09410 bifunctional UDP-sugar hydrolase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CYJ47_12530 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D CYJ47_09450 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYJ47_05585 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYJ47_12410 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYJ47_03820 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CYJ47_00585 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CYJ47_02500 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CYJ47_06590 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CYJ47_02510 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CYJ47_06565 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CYJ47_09260 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CYJ47_05250 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CYJ47_08650 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CYJ47_04890 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CYJ47_06575 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpyr00250]
D CYJ47_04240 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CYJ47_03990 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CYJ47_00605 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CYJ47_06080 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CYJ47_06845 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CYJ47_06815 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CYJ47_00800 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CYJ47_01435 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CYJ47_11460 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CYJ47_12415 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CYJ47_08610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CYJ47_04495 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CYJ47_03805 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_03890 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_05600 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CYJ47_05595 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CYJ47_04530 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CYJ47_01535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cpyr00260]
D CYJ47_11365 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CYJ47_11340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CYJ47_07725 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CYJ47_07720 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CYJ47_07150 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CYJ47_08220 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CYJ47_04490 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CYJ47_10710 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CYJ47_07225 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CYJ47_08715 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CYJ47_02520 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CYJ47_03935 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CYJ47_03930 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_03925 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D CYJ47_05470 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CYJ47_04320 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CYJ47_12260 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CYJ47_12950 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CYJ47_12955 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cpyr00270]
D CYJ47_01645 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CYJ47_01650 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CYJ47_03400 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CYJ47_04285 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CYJ47_09525 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CYJ47_02265 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CYJ47_05630 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CYJ47_00670 nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CYJ47_04195 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CYJ47_00185 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CYJ47_11365 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CYJ47_11340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CYJ47_07725 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CYJ47_09535 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CYJ47_09520 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CYJ47_03955 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CYJ47_00755 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYJ47_09415 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYJ47_01130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_10725 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_03155 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CYJ47_05470 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CYJ47_07225 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CYJ47_08715 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cpyr00280]
D CYJ47_03955 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_09420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CYJ47_09385 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CYJ47_07520 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CYJ47_05985 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CYJ47_12050 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpyr00290]
D CYJ47_04320 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CYJ47_07085 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CYJ47_07080 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CYJ47_07220 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CYJ47_07265 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYJ47_07260 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CYJ47_07255 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CYJ47_07275 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CYJ47_03955 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CYJ47_00605 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CYJ47_11380 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cpyr00300]
D CYJ47_07725 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CYJ47_11365 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CYJ47_11340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CYJ47_02805 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CYJ47_04895 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CYJ47_04885 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CYJ47_07995 DapH/DapD/GlmU-related protein K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CYJ47_08005 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CYJ47_09050 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D CYJ47_07990 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CYJ47_05075 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CYJ47_07745 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CYJ47_04150 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CYJ47_04155 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cpyr00310]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_08610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cpyr00220]
D CYJ47_11465 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CYJ47_12400 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CYJ47_06845 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CYJ47_06815 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CYJ47_03805 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_03890 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_04495 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CYJ47_12395 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CYJ47_00605 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:cpyr00330]
D CYJ47_10680 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CYJ47_03225 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CYJ47_03230 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CYJ47_07895 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:cpyr00340]
D CYJ47_06060 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CYJ47_06055 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CYJ47_04445 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CYJ47_04430 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CYJ47_04425 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CYJ47_04405 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CYJ47_03735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_04400 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_11545 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_08910 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D CYJ47_04395 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CYJ47_05850 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CYJ47_05865 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CYJ47_05870 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CYJ47_05855 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:cpyr00350]
D CYJ47_03735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_04400 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_11545 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_08610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CYJ47_05725 maleylpyruvate isomerase family mycothiol-dependent enzyme K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
D CYJ47_05730 fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism
D CYJ47_03735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_04400 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_11545 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cpyr00380]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_03865 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpyr00400]
D CYJ47_04055 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CYJ47_05545 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CYJ47_05550 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CYJ47_05540 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CYJ47_09185 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CYJ47_05535 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CYJ47_12970 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CYJ47_12965 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CYJ47_01500 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CYJ47_04430 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CYJ47_04455 indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CYJ47_12960 trpCF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D CYJ47_12950 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CYJ47_12955 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CYJ47_08585 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D CYJ47_11520 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CYJ47_00110 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CYJ47_03735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_04400 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_11545 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D CYJ47_01065 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cpyr00430]
D CYJ47_00830 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CYJ47_00835 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cpyr00450]
D CYJ47_03400 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CYJ47_04285 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CYJ47_09525 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CYJ47_05835 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CYJ47_12890 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CYJ47_08425 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cpyr00460]
D CYJ47_00205 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CYJ47_10860 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CYJ47_04240 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CYJ47_08220 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cpyr00470]
D CYJ47_09970 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CYJ47_07060 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CYJ47_02600 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CYJ47_04165 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CYJ47_12260 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CYJ47_05075 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CYJ47_07745 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cpyr00480]
D CYJ47_08175 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CYJ47_00930 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CYJ47_03950 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CYJ47_05880 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CYJ47_09505 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CYJ47_06295 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CYJ47_05765 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cpyr00515]
D CYJ47_08440 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cpyr00514]
D CYJ47_08440 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cpyr00511]
D CYJ47_07335 sialidase family protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cpyr00542]
D CYJ47_07585 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpyr00541]
D CYJ47_08475 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CYJ47_05170 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CYJ47_10835 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CYJ47_00255 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CYJ47_00590 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CYJ47_10555 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CYJ47_10570 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CYJ47_10560 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CYJ47_09315 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CYJ47_09275 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYJ47_09285 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_09440 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_11990 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CYJ47_08325 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CYJ47_11800 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CYJ47_02925 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:cpyr00550]
D CYJ47_01685 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CYJ47_10730 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CYJ47_04180 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CYJ47_04165 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CYJ47_04150 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CYJ47_07060 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CYJ47_04155 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CYJ47_03535 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CYJ47_06030 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CYJ47_04160 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CYJ47_04175 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CYJ47_04145 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CYJ47_11935 penicillin-binding transpeptidase domain-containing protein K05364 pbpA; penicillin-binding protein A
D CYJ47_09470 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CYJ47_01015 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYJ47_11390 MurT ligase domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CYJ47_11395 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cpyr00552]
D CYJ47_06030 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CYJ47_07585 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cpyr00543]
D CYJ47_07585 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CYJ47_01645 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cpyr00730]
D CYJ47_11565 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D CYJ47_07450 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYJ47_05270 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CYJ47_11575 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CYJ47_11570 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CYJ47_07050 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CYJ47_09190 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CYJ47_12585 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CYJ47_10150 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cpyr00740]
D CYJ47_05670 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CYJ47_05660 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CYJ47_05675 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CYJ47_05665 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CYJ47_04830 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CYJ47_05475 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CYJ47_11575 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:cpyr00750]
D CYJ47_12010 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CYJ47_08715 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CYJ47_07150 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CYJ47_05375 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D CYJ47_05390 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cpyr00760]
D CYJ47_02545 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CYJ47_11995 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CYJ47_09410 bifunctional UDP-sugar hydrolase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CYJ47_03245 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CYJ47_09100 NUDIX domain-containing protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CYJ47_02420 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CYJ47_04930 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CYJ47_08945 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CYJ47_11755 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CYJ47_06740 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CYJ47_08610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cpyr00770]
D CYJ47_07265 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYJ47_07260 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CYJ47_07255 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CYJ47_07275 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CYJ47_11470 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CYJ47_01065 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CYJ47_08225 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CYJ47_05625 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CYJ47_07020 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CYJ47_06945 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CYJ47_07460 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CYJ47_03955 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:cpyr00780]
D CYJ47_13070 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CYJ47_07350 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D CYJ47_11980 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D CYJ47_09380 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cpyr00785]
D CYJ47_03915 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CYJ47_03910 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CYJ47_00060 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_03650 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CYJ47_03940 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CYJ47_07890 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CYJ47_03935 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CYJ47_03930 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CYJ47_03925 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cpyr00790]
D CYJ47_01035 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CYJ47_12585 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CYJ47_00045 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CYJ47_11680 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CYJ47_01050 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CYJ47_01040 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CYJ47_11215 sul1; sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D CYJ47_08655 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CYJ47_03170 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CYJ47_05670 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CYJ47_00030 pabB; aminodeoxychorismate synthase component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D CYJ47_01555 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CYJ47_07645 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CYJ47_07670 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CYJ47_07660 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CYJ47_07665 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CYJ47_08470 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cpyr00670]
D CYJ47_08655 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CYJ47_06085 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CYJ47_09545 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CYJ47_08220 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CYJ47_08565 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CYJ47_08560 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CYJ47_05645 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CYJ47_03930 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CYJ47_08650 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CYJ47_04890 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CYJ47_06575 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CYJ47_09530 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CYJ47_08480 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cpyr00860]
D CYJ47_07205 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_11475 glutamate--tRNA ligase family protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_10655 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CYJ47_10605 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CYJ47_10640 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CYJ47_10650 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CYJ47_10620 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CYJ47_10615 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CYJ47_05950 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CYJ47_05285 hemQ; hydrogen peroxide-dependent heme synthase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D CYJ47_10645 uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CYJ47_04755 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CYJ47_03060 TIGR04053 family radical SAM/SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D CYJ47_05780 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CYJ47_05795 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CYJ47_06190 cobJ; precorrin-3B C(17)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D CYJ47_06200 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D CYJ47_06175 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CYJ47_08665 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D CYJ47_06180 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CYJ47_06170 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D CYJ47_06195 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CYJ47_04750 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CYJ47_06210 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D CYJ47_01675 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CYJ47_04745 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CYJ47_04705 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CYJ47_03715 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CYJ47_03975 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CYJ47_03965 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CYJ47_03970 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CYJ47_03750 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CYJ47_04730 AAA family ATPase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D CYJ47_02680 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D CYJ47_09035 multicopper oxidase family protein K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpyr00130]
D CYJ47_10495 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CYJ47_07210 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CYJ47_10510 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CYJ47_10515 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CYJ47_10530 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CYJ47_10525 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CYJ47_10540 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cpyr00900]
D CYJ47_05270 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CYJ47_04670 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CYJ47_01320 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CYJ47_08400 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CYJ47_01325 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CYJ47_04680 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CYJ47_08135 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CYJ47_03435 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CYJ47_03430 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CYJ47_04110 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CYJ47_08235 isoprenyl transferase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CYJ47_03535 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cpyr00906]
D CYJ47_05885 lycopene cyclase family protein K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CYJ47_05775 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cpyr00523]
D CYJ47_10555 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CYJ47_10570 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CYJ47_10560 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CYJ47_09315 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CYJ47_07210 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CYJ47_10570 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:cpyr00946]
D CYJ47_00205 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CYJ47_10860 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cpyr00332]
D CYJ47_03225 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CYJ47_03230 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cpyr00261]
D CYJ47_11365 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CYJ47_11340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CYJ47_02805 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CYJ47_04895 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CYJ47_04885 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cpyr00521]
D CYJ47_02770 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_04040 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_01850 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYJ47_04435 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CYJ47_05235 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CYJ47_10555 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CYJ47_10570 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CYJ47_10560 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CYJ47_09315 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CYJ47_02770 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D CYJ47_04040 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cpyr00525]
D CYJ47_10555 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CYJ47_10570 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cpyr00401]
D CYJ47_11520 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CYJ47_03735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_04400 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_11545 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CYJ47_12970 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CYJ47_12965 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CYJ47_13070 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CYJ47_03640 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cpyr00999]
D CYJ47_02265 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CYJ47_05630 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CYJ47_00205 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CYJ47_10860 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cpyr00362]
D CYJ47_03140 alpha/beta fold hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CYJ47_12145 lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D CYJ47_12465 lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D CYJ47_13090 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation
D CYJ47_04525 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D CYJ47_01730 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CYJ47_01725 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cpyr03020]
D CYJ47_10415 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CYJ47_10410 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYJ47_10100 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CYJ47_05620 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CYJ47_08780 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cpyr03010]
D CYJ47_06955 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CYJ47_04635 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CYJ47_10300 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CYJ47_10105 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CYJ47_10170 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CYJ47_13165 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CYJ47_10385 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CYJ47_10185 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CYJ47_10015 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CYJ47_10335 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CYJ47_10110 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CYJ47_10390 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CYJ47_10115 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CYJ47_08545 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CYJ47_04840 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CYJ47_04565 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CYJ47_10285 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CYJ47_08550 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CYJ47_10310 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CYJ47_03285 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CYJ47_10445 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CYJ47_10315 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CYJ47_10330 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CYJ47_10325 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CYJ47_10235 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CYJ47_10180 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CYJ47_10425 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CYJ47_13175 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CYJ47_10430 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CYJ47_10450 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CYJ47_10020 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CYJ47_10245 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CYJ47_10160 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CYJ47_10295 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CYJ47_10095 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CYJ47_10175 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CYJ47_04590 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CYJ47_06885 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CYJ47_03200 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CYJ47_10305 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CYJ47_10320 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CYJ47_10240 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CYJ47_08345 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D CYJ47_03205 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CYJ47_08535 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CYJ47_10290 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CYJ47_10165 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CYJ47_08525 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CYJ47_08520 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CYJ47_08540 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CYJ47_12840 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CYJ47_06890 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CYJ47_02430 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpyr00970]
D CYJ47_07205 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_11475 glutamate--tRNA ligase family protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_07410 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CYJ47_07315 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CYJ47_07415 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CYJ47_05510 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CYJ47_05495 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CYJ47_03555 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CYJ47_05345 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CYJ47_00140 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CYJ47_01330 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CYJ47_08425 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CYJ47_05645 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CYJ47_03165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CYJ47_12985 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CYJ47_04220 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CYJ47_01090 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CYJ47_07750 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CYJ47_04765 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CYJ47_05465 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CYJ47_06865 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CYJ47_06860 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CYJ47_06805 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CYJ47_09490 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cpyr03060]
D CYJ47_10155 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CYJ47_10460 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CYJ47_05740 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CYJ47_05420 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CYJ47_05425 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CYJ47_05415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CYJ47_12855 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_13285 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_06630 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYJ47_09230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYJ47_04560 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CYJ47_04550 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CYJ47_03085 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYJ47_06140 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYJ47_07935 Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D CYJ47_06145 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D CYJ47_04595 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CYJ47_04260 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cpyr04122]
D CYJ47_07450 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYJ47_00755 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYJ47_09415 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYJ47_07445 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CYJ47_07660 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CYJ47_07645 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CYJ47_07650 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D CYJ47_09125 ThiF family adenylyltransferase K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CYJ47_07670 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
D CYJ47_06110 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:cpyr03018]
D CYJ47_03195 translation initiation factor IF-2 N-terminal domain-containing protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CYJ47_08285 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYJ47_04880 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CYJ47_07845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CYJ47_07630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CYJ47_04900 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CYJ47_00695 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CYJ47_00985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_09895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_01000 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CYJ47_12915 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cpyr03030]
D CYJ47_04370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_11385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_04280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_07430 3'-5' exonuclease K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_11415 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYJ47_10885 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYJ47_03275 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYJ47_12830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYJ47_13180 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CYJ47_03590 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CYJ47_02850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_13170 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_03750 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CYJ47_04600 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CYJ47_06970 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CYJ47_07425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cpyr03410]
D CYJ47_11275 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CYJ47_07045 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CYJ47_01285 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CYJ47_04515 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CYJ47_13000 zinc finger domain-containing protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CYJ47_08635 DNA-formamidopyrimidine glycosylase family protein K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CYJ47_11715 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CYJ47_01135 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CYJ47_00910 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CYJ47_09500 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CYJ47_06970 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CYJ47_07425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cpyr03420]
D CYJ47_08305 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CYJ47_06905 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D CYJ47_08985 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D CYJ47_06930 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D CYJ47_05685 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D CYJ47_08580 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_09095 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_09110 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_06970 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CYJ47_07425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CYJ47_08780 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cpyr03430]
D CYJ47_08580 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_09095 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_09110 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_08140 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CYJ47_08145 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CYJ47_02850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_13170 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_04280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_07430 3'-5' exonuclease K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_12830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYJ47_11415 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYJ47_03275 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYJ47_10885 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYJ47_04370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_11385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_07425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cpyr03440]
D CYJ47_02850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_13170 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_12825 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CYJ47_03530 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CYJ47_11405 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D CYJ47_04970 recA; recombinase RecA K03553 recA; recombination protein RecA
D CYJ47_06970 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CYJ47_05405 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CYJ47_05410 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CYJ47_05400 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CYJ47_00600 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CYJ47_07035 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CYJ47_04280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_07430 3'-5' exonuclease K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_12830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYJ47_11415 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYJ47_03275 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYJ47_10885 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYJ47_04370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_11385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_05635 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cpyr03250]
D CYJ47_11965 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cpyr02010]
D CYJ47_07710 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CYJ47_07715 ABC transporter permease subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CYJ47_01470 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CYJ47_09330 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CYJ47_09335 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D CYJ47_09345 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D CYJ47_09350 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D CYJ47_12550 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CYJ47_07175 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CYJ47_07185 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CYJ47_07180 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CYJ47_07170 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CYJ47_01575 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CYJ47_01580 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D CYJ47_01585 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D CYJ47_01590 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CYJ47_11435 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D CYJ47_11430 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D CYJ47_11425 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D CYJ47_11440 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D CYJ47_09605 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CYJ47_00155 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D CYJ47_09615 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D CYJ47_00160 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CYJ47_09610 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CYJ47_08605 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CYJ47_08600 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D CYJ47_08595 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D CYJ47_08590 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CYJ47_10225 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D CYJ47_10230 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D CYJ47_10210 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D CYJ47_10215 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D CYJ47_10220 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D CYJ47_07605 ABC transporter ATP-binding protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D CYJ47_12795 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CYJ47_04085 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D CYJ47_04095 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D CYJ47_04100 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CYJ47_02235 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D CYJ47_02245 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D CYJ47_02240 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CYJ47_09195 metal ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CYJ47_09205 iron chelate uptake ABC transporter family permease subunit K11708 troC; manganese/zinc/iron transport system permease protein
D CYJ47_09210 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D CYJ47_09200 ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CYJ47_01805 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D CYJ47_01800 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D CYJ47_01810 energy-coupling factor transporter transmembrane component T K02008 cbiQ; cobalt/nickel transport system permease protein
D CYJ47_01815 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CYJ47_04960 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CYJ47_04950 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D CYJ47_04955 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CYJ47_00560 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D CYJ47_01120 transporter K16785 ecfT; energy-coupling factor transport system permease protein
D CYJ47_07110 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D CYJ47_11590 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D CYJ47_11595 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CYJ47_02950 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D CYJ47_02955 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CYJ47_08855 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CYJ47_08860 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CYJ47_00545 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CYJ47_00550 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CYJ47_04250 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cpyr02060]
D CYJ47_01155 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CYJ47_05100 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D CYJ47_12720 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CYJ47_12115 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CYJ47_09585 beta-glucoside-specific PTS transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CYJ47_12235 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CYJ47_12230 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CYJ47_12225 PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D CYJ47_12480 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CYJ47_12485 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CYJ47_05105 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CYJ47_05110 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cpyr03070]
D CYJ47_05420 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CYJ47_05425 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CYJ47_10460 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CYJ47_05740 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CYJ47_10155 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CYJ47_05415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CYJ47_12855 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_13285 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_06630 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYJ47_09230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYJ47_04550 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CYJ47_04560 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CYJ47_06140 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYJ47_07935 Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D CYJ47_06145 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D CYJ47_09695 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cpyr02020]
D CYJ47_12585 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CYJ47_00045 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CYJ47_11680 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CYJ47_10705 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CYJ47_10700 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CYJ47_01575 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CYJ47_02475 ATP-binding protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CYJ47_02480 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CYJ47_02455 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CYJ47_02460 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CYJ47_02470 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CYJ47_05795 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CYJ47_08510 HAMP domain-containing sensor histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CYJ47_08515 response regulator transcription factor K07669 mprA; two-component system, OmpR family, response regulator MprA
D CYJ47_08505 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CYJ47_09250 mtrB; MtrAB system histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CYJ47_09255 mtrA; MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CYJ47_12835 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CYJ47_02235 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D CYJ47_02240 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CYJ47_02245 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D CYJ47_11170 HAMP domain-containing sensor histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CYJ47_11560 ABC transporter ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D CYJ47_08555 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CYJ47_07690 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_07695 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_07705 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_07700 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D CYJ47_10955 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CYJ47_10950 hypothetical protein K12510 tadB; tight adherence protein B
D CYJ47_03805 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_03890 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_08360 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D CYJ47_01725 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CYJ47_01730 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CYJ47_11280 glxR; CRP-like cAMP-activated global transcriptional regulator GlxR K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYJ47_03725 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CYJ47_11800 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CYJ47_02925 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cpyr02024]
D CYJ47_00185 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CYJ47_12970 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CYJ47_12965 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CYJ47_04055 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CYJ47_02480 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CYJ47_03475 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYJ47_10720 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYJ47_11280 glxR; CRP-like cAMP-activated global transcriptional regulator GlxR K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYJ47_05660 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CYJ47_08605 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CYJ47_08600 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D CYJ47_08595 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D CYJ47_08590 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CYJ47_03380 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CYJ47_05430 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CYJ47_02790 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CYJ47_03375 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CYJ47_02795 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CYJ47_03370 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CYJ47_03365 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CYJ47_02800 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CYJ47_12855 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_13285 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_10460 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CYJ47_05740 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CYJ47_10155 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CYJ47_05415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CYJ47_06630 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYJ47_09230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYJ47_04550 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CYJ47_04560 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CYJ47_11560 ABC transporter ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D CYJ47_12550 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D CYJ47_05225 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CYJ47_08285 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cpyr04980]
D CYJ47_01675 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CYJ47_05995 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D CYJ47_05985 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cpyr01501]
D CYJ47_00470 glycoside hydrolase family 3 N-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CYJ47_08605 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CYJ47_08600 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D CYJ47_08595 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D CYJ47_08590 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CYJ47_04145 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cpyr01502]
D CYJ47_11170 HAMP domain-containing sensor histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CYJ47_07060 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CYJ47_09970 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CYJ47_04155 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CYJ47_04160 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CYJ47_04175 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpyr01503]
D CYJ47_12880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CYJ47_11965 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cpyr01000]
C 01001 Protein kinases [BR:cpyr01001]
D CYJ47_00860 tetratricopeptide repeat protein K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D CYJ47_04060 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CYJ47_11940 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CYJ47_11945 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CYJ47_10705 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CYJ47_02475 ATP-binding protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CYJ47_08510 HAMP domain-containing sensor histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CYJ47_09250 mtrB; MtrAB system histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CYJ47_11170 HAMP domain-containing sensor histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CYJ47_01415 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cpyr01009]
D CYJ47_11925 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CYJ47_02520 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cpyr01002]
D CYJ47_04260 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CYJ47_01740 HyaD/HybD family hydrogenase maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CYJ47_06065 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D CYJ47_06070 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D CYJ47_05380 hypothetical protein K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D CYJ47_05920 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CYJ47_09855 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CYJ47_04030 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CYJ47_01535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CYJ47_04530 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CYJ47_03990 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CYJ47_11355 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D CYJ47_09740 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D CYJ47_00410 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D CYJ47_05880 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CYJ47_03460 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CYJ47_11665 M13-type metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CYJ47_03950 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CYJ47_07990 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CYJ47_12440 amidohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D CYJ47_00980 M20/M25/M40 family metallo-hydrolase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D CYJ47_04700 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CYJ47_10140 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CYJ47_01030 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CYJ47_11655 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D CYJ47_08505 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CYJ47_10050 S8 family serine peptidase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CYJ47_01455 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CYJ47_09470 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CYJ47_01015 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYJ47_03130 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CYJ47_03135 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CYJ47_09075 PDZ domain-containing protein K07177 K07177; Lon-like protease
D CYJ47_05125 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CYJ47_04595 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CYJ47_07895 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 01003 Glycosyltransferases [BR:cpyr01003]
D CYJ47_06225 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CYJ47_08440 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D CYJ47_05365 glycosyltransferase family 4 protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D CYJ47_04035 glycosyltransferase family 4 protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D CYJ47_10500 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D CYJ47_07960 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CYJ47_07585 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CYJ47_04105 alpha-(1->6)-mannopyranosyltransferase A K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CYJ47_05810 mptB; polyprenol phosphomannose-dependent alpha 1,6 mannosyltransferase MptB K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CYJ47_11640 arabinosyltransferase domain-containing protein K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D CYJ47_11635 galactan 5-O-arabinofuranosyltransferase K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D CYJ47_00280 zomB; flagellar motor control protein ZomB K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CYJ47_05295 glycosyltransferase family 87 protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D CYJ47_00460 DUF3367 domain-containing protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D CYJ47_10060 DUF6541 family protein K22902 K22902; D-galactosaminyltransferase
D CYJ47_11600 glycosyltransferase family 2 protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D CYJ47_00265 glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D CYJ47_09310 glycosyltransferase family 2 protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D CYJ47_01370 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpyr01005]
D CYJ47_07585 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpyr01011]
D CYJ47_01685 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CYJ47_10730 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CYJ47_04180 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CYJ47_04165 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CYJ47_04150 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CYJ47_07060 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CYJ47_09970 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CYJ47_02600 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CYJ47_04160 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CYJ47_04175 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CYJ47_06030 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CYJ47_12900 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D CYJ47_04145 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CYJ47_11935 penicillin-binding transpeptidase domain-containing protein K05364 pbpA; penicillin-binding protein A
D CYJ47_09470 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CYJ47_01015 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYJ47_04030 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CYJ47_11355 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D CYJ47_09740 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D CYJ47_05520 endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CYJ47_12880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cpyr01004]
D CYJ47_13070 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CYJ47_05385 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D CYJ47_00310 pks13; polyketide synthase Pks13 K12437 pks13; polyketide synthase 13
D CYJ47_03475 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYJ47_10720 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYJ47_00305 AMP-binding protein K12428 fadD32; fatty acid CoA ligase FadD32
D CYJ47_04045 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cpyr01006]
D CYJ47_03430 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CYJ47_04110 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CYJ47_08235 isoprenyl transferase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CYJ47_03535 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CYJ47_05070 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CYJ47_10540 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CYJ47_05780 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CYJ47_00275 decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:cpyr01007]
D CYJ47_07205 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_11475 glutamate--tRNA ligase family protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_06805 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CYJ47_09490 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CYJ47_01330 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CYJ47_07750 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CYJ47_08425 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CYJ47_04220 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CYJ47_03165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CYJ47_12985 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CYJ47_01090 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CYJ47_05495 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CYJ47_05465 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CYJ47_03555 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CYJ47_00140 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CYJ47_04765 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CYJ47_05345 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CYJ47_05510 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CYJ47_06865 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CYJ47_06860 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CYJ47_00605 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CYJ47_09050 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D CYJ47_03735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_04400 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_11545 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYJ47_03400 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CYJ47_10605 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CYJ47_03955 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CYJ47_08715 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cpyr00194]
D CYJ47_07540 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CYJ47_07545 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CYJ47_07550 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CYJ47_07555 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CYJ47_07560 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CYJ47_07565 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CYJ47_07570 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CYJ47_07575 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cpyr03000]
D CYJ47_05140 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CYJ47_07295 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CYJ47_05115 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CYJ47_05120 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CYJ47_00375 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CYJ47_02705 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CYJ47_12545 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CYJ47_00135 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CYJ47_12475 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D CYJ47_04380 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D CYJ47_05925 helix-turn-helix domain-containing protein K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D CYJ47_07365 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D CYJ47_01660 ramA; acetate metabolism transcriptional regulator RamA K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D CYJ47_00710 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CYJ47_03545 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CYJ47_11280 glxR; CRP-like cAMP-activated global transcriptional regulator GlxR K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYJ47_08090 metalloregulator ArsR/SmtB family transcription factor K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D CYJ47_04935 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D CYJ47_00485 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CYJ47_05175 iron dependent repressor, metal binding and dimerization domain protein K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D CYJ47_03870 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CYJ47_09380 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CYJ47_01150 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D CYJ47_09575 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D CYJ47_09160 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CYJ47_09300 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CYJ47_09890 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CYJ47_11300 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CYJ47_08800 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CYJ47_12870 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CYJ47_09770 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CYJ47_01315 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CYJ47_06850 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CYJ47_03495 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CYJ47_06680 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D CYJ47_12520 sugar-binding domain-containing protein K05346 deoR; deoxyribonucleoside regulator
D CYJ47_05585 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYJ47_12410 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYJ47_12920 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D CYJ47_05130 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CYJ47_04130 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cpyr03021]
D CYJ47_08780 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CYJ47_10100 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CYJ47_10415 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CYJ47_10410 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYJ47_05620 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CYJ47_05225 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D CYJ47_05185 sigma-70 family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CYJ47_07945 sigE; RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CYJ47_09170 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CYJ47_11335 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CYJ47_12895 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CYJ47_04785 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CYJ47_05565 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CYJ47_10455 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CYJ47_08255 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CYJ47_07630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cpyr03019]
D CYJ47_03195 translation initiation factor IF-2 N-terminal domain-containing protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CYJ47_04510 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CYJ47_04900 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CYJ47_03585 ribonuclease domain-containing protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CYJ47_02750 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CYJ47_07845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CYJ47_08285 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYJ47_04880 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CYJ47_07630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CYJ47_00695 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CYJ47_00985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_09895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_01000 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CYJ47_12915 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CYJ47_05690 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D CYJ47_06150 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D CYJ47_05135 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D CYJ47_11735 ATP-dependent helicase C-terminal domain-containing protein K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cpyr03011]
D CYJ47_06955 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CYJ47_04635 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CYJ47_10300 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CYJ47_10105 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CYJ47_10170 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CYJ47_13165 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CYJ47_10385 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CYJ47_10185 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CYJ47_10015 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CYJ47_10335 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CYJ47_10110 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CYJ47_10390 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CYJ47_10115 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CYJ47_08545 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CYJ47_04840 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CYJ47_04565 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CYJ47_10285 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CYJ47_08550 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CYJ47_10310 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CYJ47_03285 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CYJ47_10445 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CYJ47_10315 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CYJ47_10330 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CYJ47_10325 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CYJ47_10235 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CYJ47_10180 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CYJ47_13175 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CYJ47_10430 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CYJ47_10450 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CYJ47_10425 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CYJ47_10020 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CYJ47_10245 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CYJ47_10160 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CYJ47_10295 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CYJ47_10095 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CYJ47_10175 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CYJ47_04590 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CYJ47_06885 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CYJ47_03200 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CYJ47_10305 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CYJ47_10320 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CYJ47_10240 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CYJ47_03205 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CYJ47_08535 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CYJ47_10290 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CYJ47_10165 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CYJ47_08525 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CYJ47_08520 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CYJ47_08540 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CYJ47_12840 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CYJ47_06890 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CYJ47_02430 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CYJ47_08345 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:cpyr03009]
D CYJ47_04510 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CYJ47_02750 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CYJ47_03525 era; GTPase Era K03595 era; GTPase
D CYJ47_03220 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D CYJ47_04785 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CYJ47_05565 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CYJ47_10455 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CYJ47_08405 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CYJ47_05650 transcription antitermination factor NusB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CYJ47_07025 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CYJ47_03505 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CYJ47_12860 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CYJ47_04135 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CYJ47_08435 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CYJ47_06745 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CYJ47_07970 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CYJ47_01335 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CYJ47_04660 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CYJ47_13260 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CYJ47_06695 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CYJ47_04265 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CYJ47_11190 erm; 23S ribosomal RNA methyltransferase Erm K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D CYJ47_09955 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CYJ47_04570 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D CYJ47_03195 translation initiation factor IF-2 N-terminal domain-containing protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D CYJ47_05515 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CYJ47_07845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CYJ47_09190 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CYJ47_06685 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D CYJ47_05090 hflX; GTPase HflX K03665 hflX; GTPase
D CYJ47_07590 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CYJ47_05440 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CYJ47_04800 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D CYJ47_04780 ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP
D CYJ47_11690 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D CYJ47_03250 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D CYJ47_03515 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D CYJ47_08115 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D CYJ47_04505 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cpyr03016]
D CYJ47_03585 ribonuclease domain-containing protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CYJ47_07205 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_11475 glutamate--tRNA ligase family protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_04765 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CYJ47_04220 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CYJ47_12985 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CYJ47_08425 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CYJ47_07750 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CYJ47_01090 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CYJ47_05495 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CYJ47_05510 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CYJ47_03555 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CYJ47_05345 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CYJ47_00140 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CYJ47_01330 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CYJ47_03165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CYJ47_05465 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CYJ47_06865 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CYJ47_06860 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CYJ47_06805 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CYJ47_09490 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CYJ47_05190 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CYJ47_06105 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D CYJ47_00355 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CYJ47_10065 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CYJ47_04825 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CYJ47_07450 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYJ47_07590 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CYJ47_05070 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CYJ47_08645 inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CYJ47_12845 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CYJ47_02610 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CYJ47_05275 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CYJ47_09175 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CYJ47_11515 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CYJ47_05055 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CYJ47_04575 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CYJ47_09550 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CYJ47_06870 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CYJ47_13260 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CYJ47_07445 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CYJ47_01550 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D CYJ47_11495 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CYJ47_01020 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CYJ47_09950 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CYJ47_09965 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CYJ47_00190 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CYJ47_04880 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cpyr03012]
D CYJ47_04795 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CYJ47_06895 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CYJ47_04640 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CYJ47_10375 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CYJ47_10380 fusA; elongation factor G K02355 fusA; elongation factor G
D CYJ47_07625 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CYJ47_04650 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CYJ47_07620 HemK/PrmC family methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CYJ47_07900 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CYJ47_12015 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CYJ47_10120 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CYJ47_05560 efp; elongation factor P K02356 efp; elongation factor P
D CYJ47_08900 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CYJ47_08365 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cpyr03110]
D CYJ47_00740 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CYJ47_01205 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CYJ47_03145 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CYJ47_00695 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CYJ47_00985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_09895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_00705 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CYJ47_03500 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CYJ47_00700 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D CYJ47_10925 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D CYJ47_04345 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D CYJ47_09900 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D CYJ47_01030 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CYJ47_07575 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CYJ47_05335 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D CYJ47_01715 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CYJ47_01745 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CYJ47_01720 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CYJ47_12620 molecular chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D CYJ47_10050 S8 family serine peptidase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CYJ47_11965 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CYJ47_05455 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CYJ47_12885 trxA; thioredoxin K03671 TXN; thioredoxin
D CYJ47_13185 trxA; thioredoxin K03671 TXN; thioredoxin
D CYJ47_07510 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:cpyr04131]
D CYJ47_03185 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CYJ47_03085 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYJ47_05710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CYJ47_10710 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CYJ47_00070 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYJ47_04465 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:cpyr04121]
D CYJ47_06120 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cpyr03051]
D CYJ47_06110 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D CYJ47_06125 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D CYJ47_06130 WYL domain-containing protein K13572 pafB; proteasome accessory factor B
D CYJ47_06135 WYL domain-containing protein K13573 pafC; proteasome accessory factor C
D CYJ47_06115 dop; depupylase/deamidase Dop K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cpyr03032]
D CYJ47_12835 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CYJ47_13180 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CYJ47_09680 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D CYJ47_03590 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CYJ47_02850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_13170 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_04280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_07430 3'-5' exonuclease K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_12830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYJ47_03275 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYJ47_10885 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYJ47_04370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_11385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_11415 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYJ47_03750 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CYJ47_04600 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CYJ47_06970 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CYJ47_07425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CYJ47_12695 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CYJ47_12815 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CYJ47_10895 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cpyr03036]
D CYJ47_04510 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CYJ47_12835 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CYJ47_07295 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CYJ47_04535 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D CYJ47_06705 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D CYJ47_06700 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D CYJ47_08860 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CYJ47_04145 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CYJ47_04910 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CYJ47_04185 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D CYJ47_04170 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D CYJ47_08855 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CYJ47_04190 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CYJ47_12880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CYJ47_04205 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D CYJ47_06710 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_09775 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_11015 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_11145 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_12865 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_12870 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CYJ47_09770 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CYJ47_12860 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CYJ47_04625 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CYJ47_06715 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CYJ47_07930 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CYJ47_12345 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CYJ47_05700 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cpyr03400]
D CYJ47_13095 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CYJ47_07045 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CYJ47_01285 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CYJ47_11275 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CYJ47_08780 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CYJ47_00875 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CYJ47_07855 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CYJ47_05250 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CYJ47_01135 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CYJ47_11715 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CYJ47_04515 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CYJ47_13000 zinc finger domain-containing protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CYJ47_08635 DNA-formamidopyrimidine glycosylase family protein K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CYJ47_00910 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CYJ47_09500 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CYJ47_07425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CYJ47_06970 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CYJ47_06905 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D CYJ47_08985 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D CYJ47_06930 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D CYJ47_05685 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D CYJ47_08580 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_09095 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_09110 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYJ47_10415 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CYJ47_10410 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYJ47_10100 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CYJ47_05620 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CYJ47_08305 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CYJ47_08140 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CYJ47_08145 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CYJ47_04280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_07430 3'-5' exonuclease K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYJ47_12830 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYJ47_03275 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYJ47_10885 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYJ47_04370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_11385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CYJ47_11415 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYJ47_02850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_13170 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_04970 recA; recombinase RecA K03553 recA; recombination protein RecA
D CYJ47_05405 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CYJ47_05410 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CYJ47_05400 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CYJ47_05635 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CYJ47_01305 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CYJ47_12825 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CYJ47_00600 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CYJ47_07035 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CYJ47_03530 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CYJ47_11405 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D CYJ47_06735 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CYJ47_11840 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D CYJ47_12695 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CYJ47_12815 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CYJ47_10895 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CYJ47_04235 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CYJ47_05125 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CYJ47_09635 DNA polymerase Y family protein K14161 imuB; protein ImuB
D CYJ47_09600 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CYJ47_04975 regulatory protein RecX K03565 recX; regulatory protein
D CYJ47_02540 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CYJ47_08640 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CYJ47_07070 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D CYJ47_06720 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D CYJ47_02500 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CYJ47_06590 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CYJ47_02510 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CYJ47_06565 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CYJ47_04805 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cpyr03029]
D CYJ47_04795 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CYJ47_06895 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CYJ47_04640 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CYJ47_10375 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CYJ47_10380 fusA; elongation factor G K02355 fusA; elongation factor G
D CYJ47_03525 era; GTPase Era K03595 era; GTPase
D CYJ47_06805 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CYJ47_12985 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CYJ47_05495 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CYJ47_03555 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CYJ47_07750 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CYJ47_07410 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CYJ47_07315 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CYJ47_07415 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CYJ47_02850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_13170 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CYJ47_00695 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CYJ47_00700 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D CYJ47_00985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_09895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_09900 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D CYJ47_00705 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CYJ47_03500 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CYJ47_07450 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYJ47_07930 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CYJ47_05780 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CYJ47_05795 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CYJ47_12855 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_13285 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cpyr02000]
D CYJ47_00545 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CYJ47_00550 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CYJ47_11560 ABC transporter ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D CYJ47_03405 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CYJ47_04860 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CYJ47_07885 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CYJ47_11005 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D CYJ47_04250 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D CYJ47_08395 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D CYJ47_11010 tetA; tetracycline efflux ABC transporter TetAB subunit A K02021 ABC.MR; putative ABC transport system ATP-binding protein
D CYJ47_07710 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CYJ47_07715 ABC transporter permease subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CYJ47_01470 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CYJ47_09330 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CYJ47_01480 ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein
D CYJ47_01485 sugar ABC transporter permease K25087 musF; maltose transport system permease protein
D CYJ47_01490 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein
D CYJ47_09335 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D CYJ47_09345 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D CYJ47_09350 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D CYJ47_12550 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CYJ47_07175 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CYJ47_07185 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CYJ47_07180 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CYJ47_07170 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CYJ47_01575 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CYJ47_01580 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D CYJ47_01585 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D CYJ47_01590 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CYJ47_11435 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D CYJ47_11430 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D CYJ47_11425 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D CYJ47_11440 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D CYJ47_09605 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CYJ47_00155 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D CYJ47_09615 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D CYJ47_00160 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CYJ47_09610 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CYJ47_00865 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CYJ47_07005 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CYJ47_07010 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D CYJ47_07015 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CYJ47_08605 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CYJ47_08600 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D CYJ47_08595 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D CYJ47_08590 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CYJ47_10225 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D CYJ47_10230 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D CYJ47_10210 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D CYJ47_10215 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D CYJ47_10220 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D CYJ47_03380 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CYJ47_05430 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CYJ47_02790 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CYJ47_03375 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CYJ47_02795 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CYJ47_03370 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CYJ47_03365 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CYJ47_02800 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CYJ47_07605 ABC transporter ATP-binding protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D CYJ47_13055 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D CYJ47_13050 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D CYJ47_13045 ATP-binding cassette domain-containing protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D CYJ47_12795 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D CYJ47_04085 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D CYJ47_04095 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D CYJ47_04100 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CYJ47_08880 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CYJ47_01390 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CYJ47_01790 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CYJ47_07595 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CYJ47_01395 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D CYJ47_01795 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D CYJ47_07600 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D CYJ47_08870 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D CYJ47_08875 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D CYJ47_12785 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D CYJ47_12790 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D CYJ47_01400 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CYJ47_01785 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CYJ47_07490 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CYJ47_08865 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CYJ47_12780 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CYJ47_07000 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CYJ47_06995 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D CYJ47_06990 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CYJ47_02235 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D CYJ47_02245 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D CYJ47_02240 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CYJ47_09195 metal ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CYJ47_09205 iron chelate uptake ABC transporter family permease subunit K11708 troC; manganese/zinc/iron transport system permease protein
D CYJ47_09210 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D CYJ47_09200 ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CYJ47_00635 anchored repeat-type ABC transporter permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein
D CYJ47_00640 ATP-binding cassette domain-containing protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D CYJ47_01805 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D CYJ47_01810 energy-coupling factor transporter transmembrane component T K02008 cbiQ; cobalt/nickel transport system permease protein
D CYJ47_01800 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D CYJ47_01815 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CYJ47_04960 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CYJ47_04950 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D CYJ47_04955 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CYJ47_01115 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component
D CYJ47_00555 MptD family putative ECF transporter S component K16926 htsT; energy-coupling factor transport system substrate-specific component
D CYJ47_00560 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D CYJ47_01120 transporter K16785 ecfT; energy-coupling factor transport system permease protein
D CYJ47_07110 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D CYJ47_00565 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CYJ47_07115 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CYJ47_07120 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D CYJ47_01350 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CYJ47_01340 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D CYJ47_01345 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D CYJ47_11590 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D CYJ47_11595 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CYJ47_02950 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D CYJ47_02955 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CYJ47_13235 ABC transporter permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CYJ47_13240 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CYJ47_12070 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D CYJ47_12065 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D CYJ47_08855 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CYJ47_08860 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CYJ47_00885 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CYJ47_05800 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CYJ47_00880 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CYJ47_05805 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CYJ47_03755 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CYJ47_13245 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CYJ47_03760 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CYJ47_11725 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CYJ47_11895 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CYJ47_13250 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CYJ47_05830 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CYJ47_12940 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CYJ47_00900 sodium:phosphate symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D CYJ47_04810 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CYJ47_00380 oligosaccharide MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D CYJ47_12510 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CYJ47_01820 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D CYJ47_07685 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CYJ47_11095 cmx; chloramphenicol efflux MFS transporter Cmx K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D CYJ47_09515 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CYJ47_12000 MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CYJ47_00805 MFS transporter K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D CYJ47_02900 MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D CYJ47_04520 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D CYJ47_07320 MFS transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D CYJ47_05180 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CYJ47_06985 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CYJ47_01155 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CYJ47_05100 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D CYJ47_12720 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CYJ47_12115 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CYJ47_09585 beta-glucoside-specific PTS transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CYJ47_05105 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CYJ47_12235 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CYJ47_12230 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CYJ47_12225 PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D CYJ47_12480 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CYJ47_12485 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CYJ47_03340 MIP/aquaporin family protein K02440 glpF; glycerol uptake facilitator
D CYJ47_09105 potassium channel family protein K10716 kch; voltage-gated potassium channel
D CYJ47_06835 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D CYJ47_06855 formate transporter FocA K06212 focA; formate transporter
D CYJ47_01680 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D CYJ47_03030 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D CYJ47_07910 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D CYJ47_01835 CrcB family protein K06199 crcB; fluoride exporter
D CYJ47_01840 CrcB family protein K06199 crcB; fluoride exporter
D CYJ47_03520 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CYJ47_06300 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CYJ47_06305 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CYJ47_02675 glycoside-pentoside-hexuronide (GPH):cation symporter K16139 uidB; glucuronide carrier protein
D CYJ47_05915 amino acid permease K11733 lysP; lysine-specific permease
D CYJ47_03655 amino acid permease K11738 ansP; L-asparagine permease
D CYJ47_04230 amino acid permease K11738 ansP; L-asparagine permease
D CYJ47_08000 amino acid permease K16237 aroP; aromatic amino acid permease
D CYJ47_07240 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CYJ47_08805 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CYJ47_00345 MMPL family transporter K20470 mmpL3; trehalose monomycolate/heme transporter
D CYJ47_10575 SMR family transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CYJ47_04225 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D CYJ47_04275 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D CYJ47_12255 SLC13 family permease K13629 dsdX; D-serine transporter
D CYJ47_12055 GntP family transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CYJ47_06075 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CYJ47_07755 L-lactate permease K03303 lutP; lactate permease
D CYJ47_12095 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D CYJ47_07815 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D CYJ47_08360 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D CYJ47_10265 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CYJ47_05875 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CYJ47_08835 solute carrier family 23 protein K24206 uacT; uric acid transporter
D CYJ47_08740 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CYJ47_06285 HAAAP family serine/threonine permease K03837 sdaC; serine transporter
D CYJ47_10565 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D CYJ47_03085 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYJ47_12435 dcuC; C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D CYJ47_12460 dcuC; C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D CYJ47_00970 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CYJ47_00965 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CYJ47_00960 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CYJ47_00955 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CYJ47_00950 monovalent cation/H+ antiporter complex subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CYJ47_00945 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CYJ47_12900 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D CYJ47_03390 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D CYJ47_00495 KUP/HAK/KT family potassium transporter K03549 kup; KUP system potassium uptake protein
D CYJ47_07300 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CYJ47_05145 LysE family translocator K05835 rhtC; threonine efflux protein
D CYJ47_11700 LysE family translocator K05835 rhtC; threonine efflux protein
D CYJ47_12925 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D CYJ47_00745 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D CYJ47_03540 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D CYJ47_04170 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D CYJ47_11875 efeU; iron uptake transporter permease EfeU K07243 FTR; high-affinity iron transporter
D CYJ47_11880 efeO; iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO
D CYJ47_11885 efeB; iron uptake transporter deferrochelatase/peroxidase subunit K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D CYJ47_10590 cytochrome c biogenesis CcdA family protein K06196 ccdA; cytochrome c-type biogenesis protein
D CYJ47_07690 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_07695 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_07705 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D CYJ47_12635 DMSO/selenate family reductase complex A subunit K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D CYJ47_12630 DMSO/selenate family reductase complex B subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D CYJ47_00340 TIGR00374 family protein K20468 K20468; putative heme transporter
D CYJ47_09910 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CYJ47_01495 hypothetical protein K25089 musI; membrane protein
D CYJ47_05330 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cpyr02044]
D CYJ47_10955 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CYJ47_10950 hypothetical protein K12510 tadB; tight adherence protein B
D CYJ47_04210 YggT family protein K02221 yggT; YggT family protein
D CYJ47_03265 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D CYJ47_09695 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CYJ47_10040 eccCa; type VII secretion protein EccCa K27086 eccC; ESX secretion system protein EccC
D CYJ47_10045 eccD; type VII secretion integral membrane protein EccD K27087 eccD; ESX secretion system protein EccD
D CYJ47_10050 S8 family serine peptidase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CYJ47_10025 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein
D CYJ47_10030 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein
D CYJ47_06630 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYJ47_09230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYJ47_05420 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CYJ47_10460 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CYJ47_05425 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CYJ47_05740 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CYJ47_10155 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CYJ47_04560 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CYJ47_04550 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CYJ47_05415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CYJ47_12855 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_13285 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYJ47_06140 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYJ47_07935 Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D CYJ47_06145 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cpyr02042]
D CYJ47_03520 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CYJ47_06300 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CYJ47_06305 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cpyr02022]
D CYJ47_10705 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CYJ47_10700 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CYJ47_02475 ATP-binding protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CYJ47_02480 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CYJ47_08510 HAMP domain-containing sensor histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CYJ47_08515 response regulator transcription factor K07669 mprA; two-component system, OmpR family, response regulator MprA
D CYJ47_09250 mtrB; MtrAB system histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CYJ47_09255 mtrA; MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CYJ47_11170 HAMP domain-containing sensor histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CYJ47_01415 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CYJ47_01410 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:cpyr02035]
D CYJ47_10955 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cpyr04812]
D CYJ47_04190 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CYJ47_06710 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_09775 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_11015 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_11145 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_12865 ParA family protein K03496 parA; chromosome partitioning protein
D CYJ47_12870 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CYJ47_09770 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cpyr04147]
D CYJ47_08285 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYJ47_05710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CYJ47_05715 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CYJ47_00070 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYJ47_04465 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYJ47_11965 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CYJ47_00985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_09895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYJ47_00695 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CYJ47_08620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYJ47_09865 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CYJ47_09870 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CYJ47_10375 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CYJ47_01130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_10725 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYJ47_12940 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CYJ47_03475 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYJ47_10720 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYJ47_00900 sodium:phosphate symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D CYJ47_10150 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CYJ47_05435 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CYJ47_06815 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CYJ47_06845 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CYJ47_03780 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CYJ47_06780 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CYJ47_07500 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CYJ47_03335 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CYJ47_03805 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_03890 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYJ47_10640 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CYJ47_12585 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CYJ47_07225 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CYJ47_08560 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CYJ47_10790 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYJ47_07475 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D CYJ47_05765 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CYJ47_05720 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CYJ47_10710 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cpyr02048]
D CYJ47_11840 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D CYJ47_11845 cas2e; type I-E CRISPR-associated endoribonuclease Cas2e K09951 cas2; CRISPR-associated protein Cas2
D CYJ47_11805 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CYJ47_11815 casA; type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA
D CYJ47_11820 casB; type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D CYJ47_11825 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D CYJ47_11830 cas5e; type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D CYJ47_11835 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D CYJ47_00225 type I restriction endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CYJ47_12320 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CYJ47_00220 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CYJ47_12315 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CYJ47_00210 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CYJ47_12310 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CYJ47_02280 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CYJ47_13225 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D CYJ47_00400 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D CYJ47_00035 Fic family protein K07341 doc; death on curing protein
D CYJ47_09510 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D CYJ47_04190 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CYJ47_07205 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_11475 glutamate--tRNA ligase family protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYJ47_07450 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cpyr01504]
D CYJ47_11065 aminoglycoside O-phosphotransferase APH(3')-Ia K19272 aph3-I; aminoglycoside 3'-phosphotransferase I [EC:2.7.1.95]
D CYJ47_11080 aph(3'')-Ib; aminoglycoside O-phosphotransferase APH(3'')-Ib K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87]
D CYJ47_11085 aminoglycoside O-phosphotransferase APH(6)-Id K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D CYJ47_12000 MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CYJ47_09790 tet(W); tetracycline resistance ribosomal protection protein Tet(W) K18220 tetM; ribosomal protection tetracycline resistance protein
D CYJ47_11190 erm; 23S ribosomal RNA methyltransferase Erm K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D CYJ47_04250 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D CYJ47_11095 cmx; chloramphenicol efflux MFS transporter Cmx K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D CYJ47_11215 sul1; sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D CYJ47_11170 HAMP domain-containing sensor histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CYJ47_00805 MFS transporter K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cpyr00537]
D CYJ47_12585 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CYJ47_12030 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D CYJ47_10855 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D CYJ47_11630 decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D CYJ47_07305 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D CYJ47_11625 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CYJ47_10490 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D CYJ47_09430 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CYJ47_05790 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CYJ47_04715 mtr; mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D CYJ47_13340 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CYJ47_05290 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CYJ47_07290 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D CYJ47_05340 Dyp-type peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D CYJ47_02445 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CYJ47_02660 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CYJ47_06255 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CYJ47_01220 carboxymuconolactone decarboxylase family protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D CYJ47_01215 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D CYJ47_12110 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CYJ47_03325 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CYJ47_00825 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CYJ47_08660 mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D CYJ47_03095 metalloregulator ArsR/SmtB family transcription factor K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CYJ47_07075 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CYJ47_06275 pflA; pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CYJ47_06260 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CYJ47_05785 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CYJ47_01570 mshD; mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D CYJ47_06220 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CYJ47_10010 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D CYJ47_08420 N-acetyltransferase family protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D CYJ47_00455 acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D CYJ47_08750 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CYJ47_10715 mshA; D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D CYJ47_04460 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CYJ47_07040 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CYJ47_02320 DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D CYJ47_03810 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CYJ47_00300 cutinase family protein K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D CYJ47_02915 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CYJ47_03255 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D CYJ47_00195 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CYJ47_08415 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CYJ47_07530 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D CYJ47_05895 cellulase family glycosylhydrolase K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]
D CYJ47_06940 DUF4185 domain-containing protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D CYJ47_00915 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CYJ47_05640 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CYJ47_08045 PIG-L family deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D CYJ47_08245 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D CYJ47_00720 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CYJ47_00615 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D CYJ47_00580 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CYJ47_06035 mshC; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D CYJ47_10975 mshC; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D CYJ47_08700 carboxyl transferase domain-containing protein K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D CYJ47_00315 acyl-CoA carboxylase subunit beta K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-]
D CYJ47_09010 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CYJ47_08095 cation-translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CYJ47_07760 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CYJ47_07765 LutB/LldF family L-lactate oxidation iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CYJ47_07770 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CYJ47_10200 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D CYJ47_05840 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D CYJ47_07480 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CYJ47_02755 cmrA; mycolate reductase K27306 cmrA; mycolic acid reductase
C 99984 Nucleotide metabolism
D CYJ47_02495 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D CYJ47_06585 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D CYJ47_04200 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CYJ47_08765 resuscitation-promoting factor Rpf1 domain-containing protein K21687 rpfA; resuscitation-promoting factor RpfA
D CYJ47_08410 transglycosylase family protein K21688 rpfB; resuscitation-promoting factor RpfB
D CYJ47_10815 glycosyltransferase family 2 protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
D CYJ47_04735 VWA domain-containing protein K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
C 99999 Others
D CYJ47_08450 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CYJ47_08760 cold shock domain-containing protein K03704 cspA; cold shock protein
D CYJ47_10900 cold-shock protein K03704 cspA; cold shock protein
D CYJ47_01880 phage antirepressor KilAC domain-containing protein K07741 antB; anti-repressor protein
D CYJ47_04585 Tex family protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CYJ47_02570 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CYJ47_03125 tig; trigger factor K03545 tig; trigger factor
D CYJ47_08850 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D CYJ47_01690 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D CYJ47_01695 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CYJ47_01700 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CYJ47_01710 carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D CYJ47_02490 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D CYJ47_06525 glutaredoxin family protein K06191 nrdH; glutaredoxin-like protein NrdH
D CYJ47_11030 glutaredoxin family protein K06191 nrdH; glutaredoxin-like protein NrdH
D CYJ47_11130 glutaredoxin family protein K06191 nrdH; glutaredoxin-like protein NrdH
D CYJ47_04615 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D CYJ47_10585 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D CYJ47_08125 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CYJ47_04610 YraN family protein K07460 yraN; putative endonuclease
D CYJ47_09780 YraN family protein K07460 yraN; putative endonuclease
D CYJ47_06090 RecB family exonuclease K07465 K07465; putative RecB family exonuclease
D CYJ47_06485 PD-(D/E)XK nuclease family protein K07465 K07465; putative RecB family exonuclease
D CYJ47_04620 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D CYJ47_05505 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CYJ47_02300 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase
D CYJ47_11060 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family
D CYJ47_11070 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family
D CYJ47_11200 IS6-like element IS1628 family transposase K18320 IS15; transposase, IS6 family
D CYJ47_11205 IS6-like element IS6100 family transposase K18320 IS15; transposase, IS6 family
D CYJ47_11225 IS6-like element IS6100 family transposase K18320 IS15; transposase, IS6 family
D CYJ47_11235 IS6 family transposase K18320 IS15; transposase, IS6 family
C 99979 Viral proteins
C 99998 Others
D CYJ47_04940 PspA/IM30 family protein K03969 pspA; phage shock protein A
D CYJ47_11410 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CYJ47_06935 oligopeptide:H+ symporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CYJ47_08730 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CYJ47_00595 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CYJ47_12555 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CYJ47_06795 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CYJ47_01845 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CYJ47_06660 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CYJ47_03395 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CYJ47_03900 aspartate:alanine exchanger family transporter K07085 K07085; putative transport protein
D CYJ47_03920 TrkA C-terminal domain-containing protein K07085 K07085; putative transport protein
D CYJ47_07345 TrkA C-terminal domain-containing protein K07085 K07085; putative transport protein
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D CYJ47_08055 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D CYJ47_05905 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D CYJ47_03510 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CYJ47_08195 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CYJ47_11650 glycoside hydrolase family 25 protein K07273 acm; lysozyme
D CYJ47_03765 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CYJ47_10820 DUF2304 domain-containing protein K09153 K09153; small membrane protein
C 99994 Others
D CYJ47_01595 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D CYJ47_04915 TerC family protein K05794 terC; tellurite resistance protein TerC
D CYJ47_08100 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D CYJ47_08965 NAD(P)-binding domain-containing protein K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CYJ47_00815 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D CYJ47_10905 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D CYJ47_02880 globin K06886 glbN; hemoglobin
D CYJ47_11500 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D CYJ47_09620 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D CYJ47_05820 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CYJ47_05825 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CYJ47_07840 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D CYJ47_09485 YhjD/YihY/BrkB family envelope integrity protein K07058 K07058; membrane protein
D CYJ47_13075 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D CYJ47_13300 DUF2020 domain-containing protein K07146 K07146; UPF0176 protein
D CYJ47_00025 VTT domain-containing protein K03975 dedA; membrane-associated protein
D CYJ47_12660 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D CYJ47_02875 DUF202 domain-containing protein K00389 yidH; putative membrane protein
D CYJ47_09560 PH domain-containing protein K08981 K08981; putative membrane protein
C 99997 Function unknown
D CYJ47_00350 NYN domain-containing protein K06860 K06860; putative heme uptake system protein
D CYJ47_03480 hypothetical protein K06867 K06867; uncharacterized protein
D CYJ47_05150 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D CYJ47_12580 ATP-binding protein K06926 K06926; uncharacterized protein
D CYJ47_01640 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D CYJ47_01460 DUF2334 domain-containing protein K06986 K06986; uncharacterized protein
D CYJ47_11685 VOC family protein K06996 K06996; uncharacterized protein
D CYJ47_08020 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D CYJ47_05490 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D CYJ47_10910 permease K07089 K07089; uncharacterized protein
D CYJ47_00665 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D CYJ47_11315 metallophosphoesterase K07098 K07098; uncharacterized protein
D CYJ47_06655 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D CYJ47_03315 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein
D CYJ47_03960 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D CYJ47_06250 TSUP family transporter K07120 K07120; uncharacterized protein
D CYJ47_11580 DUF4143 domain-containing protein K07133 K07133; uncharacterized protein
D CYJ47_12180 DUF4143 domain-containing protein K07133 K07133; uncharacterized protein
D CYJ47_13255 AAA family ATPase K07133 K07133; uncharacterized protein
D CYJ47_03745 C4-type zinc ribbon domain-containing protein K07164 K07164; uncharacterized protein
D CYJ47_06615 DUF151 domain-containing protein K08999 K08999; uncharacterized protein
D CYJ47_08275 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D CYJ47_11310 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D CYJ47_09060 UPF0182 family protein K09118 K09118; uncharacterized protein
D CYJ47_08065 DUF402 domain-containing protein K09146 K09146; uncharacterized protein
D CYJ47_05900 PFL family protein K09157 K09157; uncharacterized protein
D CYJ47_09565 PH domain-containing protein K09167 K09167; uncharacterized protein
D CYJ47_08070 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D CYJ47_08830 YbaN family protein K09790 K09790; uncharacterized protein
D CYJ47_06810 Trm112 family protein K09791 K09791; uncharacterized protein
D CYJ47_10145 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D CYJ47_04790 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 23, 2024