+D GENES KO #

  KEGG Orthology (KO) - Comamonas resistens

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:crj00010] D QMY55_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D QMY55_05435 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D QMY55_14525 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D QMY55_23620 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D QMY55_05790 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D QMY55_23685 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D QMY55_24145 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D QMY55_19370 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D QMY55_21195 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D QMY55_06115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D QMY55_23650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D QMY55_06425 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D QMY55_11540 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D QMY55_11545 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_16700 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D QMY55_21090 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D QMY55_23090 cytochrome c K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_07295 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D QMY55_03820 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D QMY55_00270 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:crj00020] D QMY55_16645 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D QMY55_16515 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D QMY55_16590 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D QMY55_13520 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D QMY55_13550 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D QMY55_13255 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D QMY55_13250 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_24380 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D QMY55_24385 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D QMY55_00410 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D QMY55_01130 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D QMY55_16630 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D QMY55_16635 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D QMY55_16620 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D QMY55_16625 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D QMY55_07210 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D QMY55_07220 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D QMY55_16610 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D QMY55_17885 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D QMY55_00270 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D QMY55_11540 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D QMY55_11545 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:crj00030] D QMY55_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D QMY55_22865 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D QMY55_23680 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D QMY55_03635 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D QMY55_11505 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D QMY55_04250 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D QMY55_16805 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D QMY55_16810 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D QMY55_23085 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D QMY55_23080 gluconate 2-dehydrogenase subunit 3 family protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D QMY55_07505 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D QMY55_16785 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D QMY55_18230 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D QMY55_23620 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D QMY55_14525 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D QMY55_05435 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:crj00040] D QMY55_00500 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D QMY55_17660 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D QMY55_22865 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D QMY55_23485 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00051 Fructose and mannose metabolism [PATH:crj00051] D QMY55_11745 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D QMY55_11020 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D QMY55_13870 fumarylacetoacetate hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D QMY55_05435 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D QMY55_14525 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D QMY55_23620 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D QMY55_05790 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D QMY55_01500 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:crj00052] D QMY55_17275 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D QMY55_20915 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D QMY55_17660 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D QMY55_05435 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:crj00053] D QMY55_00500 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D QMY55_11020 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D QMY55_00505 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_23485 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00500 Starch and sucrose metabolism [PATH:crj00500] D QMY55_17660 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D QMY55_05000 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D QMY55_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:crj00520] D QMY55_05420 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D QMY55_03040 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D QMY55_15655 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D QMY55_03020 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D QMY55_02995 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D QMY55_07580 gph; phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D QMY55_24055 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D QMY55_23675 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D QMY55_03765 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D QMY55_09615 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D QMY55_20825 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D QMY55_17660 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D QMY55_00500 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D QMY55_17275 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D QMY55_20915 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D QMY55_00505 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D QMY55_01500 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D QMY55_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D QMY55_11745 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D QMY55_17825 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:crj00620] D QMY55_07295 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D QMY55_11540 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D QMY55_11545 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_07015 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D QMY55_21090 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D QMY55_16700 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D QMY55_23090 cytochrome c K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D QMY55_15575 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D QMY55_15580 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D QMY55_18530 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D QMY55_23650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D QMY55_06510 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D QMY55_20175 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D QMY55_20170 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D QMY55_05500 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D QMY55_03090 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_00410 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D QMY55_01130 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D QMY55_05200 lldD; FMN-dependent L-lactate dehydrogenase LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D QMY55_05220 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D QMY55_18080 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D QMY55_21785 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D QMY55_00200 FAD-linked oxidase C-terminal domain-containing protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D QMY55_11835 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D QMY55_11920 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D QMY55_09635 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D QMY55_01165 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D QMY55_15505 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D QMY55_02770 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D QMY55_07505 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D QMY55_18270 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D QMY55_24480 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D QMY55_16610 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D QMY55_17885 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D QMY55_07210 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D QMY55_07220 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D QMY55_17595 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D QMY55_00270 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D QMY55_06425 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D QMY55_23185 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_11395 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D QMY55_15370 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D QMY55_15375 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:crj00630] D QMY55_14955 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D QMY55_07295 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D QMY55_23185 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D QMY55_16610 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D QMY55_16645 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D QMY55_16515 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D QMY55_16590 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12060 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D QMY55_11930 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D QMY55_11935 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D QMY55_03090 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D QMY55_11945 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D QMY55_21620 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D QMY55_01020 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D QMY55_01015 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D QMY55_02770 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D QMY55_07505 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D QMY55_05295 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D QMY55_22840 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D QMY55_16055 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D QMY55_15850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D QMY55_13080 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D QMY55_13065 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13070 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D QMY55_18220 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D QMY55_18215 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D QMY55_18210 glxR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D QMY55_18230 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D QMY55_17205 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D QMY55_16810 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D QMY55_18710 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D QMY55_13265 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D QMY55_18715 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D QMY55_13270 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D QMY55_18720 formate dehydrogenase subunit gamma K00124 fdoH; formate dehydrogenase iron-sulfur subunit D QMY55_13275 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D QMY55_17980 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D QMY55_21600 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D QMY55_00905 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:crj00640] D QMY55_07295 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D QMY55_11740 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D QMY55_15575 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D QMY55_15580 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D QMY55_18530 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_02700 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_06510 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D QMY55_20175 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D QMY55_20170 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D QMY55_05500 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D QMY55_03090 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D QMY55_09865 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D QMY55_00750 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D QMY55_24035 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D QMY55_11930 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D QMY55_11935 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D QMY55_11945 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D QMY55_24385 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D QMY55_24380 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D QMY55_13425 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D QMY55_11185 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D QMY55_11175 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D QMY55_11170 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D QMY55_16590 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:crj00650] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_21340 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D QMY55_14355 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_14805 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_20670 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_02700 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D QMY55_12370 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D QMY55_07015 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D QMY55_12070 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D QMY55_11990 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D QMY55_12060 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D QMY55_06805 ketoacid CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D QMY55_17205 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D QMY55_00785 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D QMY55_13875 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D QMY55_16630 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D QMY55_16635 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D QMY55_16620 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D QMY55_16625 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D QMY55_17905 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D QMY55_00750 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D QMY55_00340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_03200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_17895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_00410 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D QMY55_01130 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D QMY55_08225 iron-containing alcohol dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D QMY55_02775 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_08725 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_09710 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_11250 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D QMY55_11255 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D QMY55_00395 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D QMY55_06605 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D QMY55_10315 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D QMY55_06640 D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22] D QMY55_14835 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_15395 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_23560 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_15390 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D QMY55_13045 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:crj00660] D QMY55_14835 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_15395 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_23560 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_15390 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D QMY55_24385 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D QMY55_24380 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D QMY55_09240 RraA family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D QMY55_10885 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D QMY55_05545 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D QMY55_05540 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D QMY55_05535 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:crj00562] D QMY55_17365 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D QMY55_13425 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D QMY55_05790 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:crj00190] D QMY55_05805 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D QMY55_05810 NADH-quinone oxidoreductase subunit B family protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D QMY55_05815 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D QMY55_05820 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D QMY55_05825 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D QMY55_05830 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D QMY55_05835 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D QMY55_05840 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D QMY55_05845 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D QMY55_05850 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D QMY55_05855 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D QMY55_05860 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D QMY55_05865 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D QMY55_05870 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D QMY55_16215 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D QMY55_16630 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D QMY55_16635 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D QMY55_16620 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D QMY55_16625 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D QMY55_03895 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D QMY55_03900 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D QMY55_03905 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D QMY55_12780 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D QMY55_19565 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D QMY55_13185 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D QMY55_19585 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D QMY55_19605 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D QMY55_19610 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D QMY55_19595 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D QMY55_12775 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D QMY55_09895 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D QMY55_22685 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D QMY55_09900 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D QMY55_22690 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D QMY55_09905 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D QMY55_09910 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D QMY55_13180 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D QMY55_13175 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D QMY55_13170 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D QMY55_16825 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D QMY55_16820 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D QMY55_16815 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D QMY55_06320 cytochrome c family protein K08738 CYC; cytochrome c D QMY55_09815 c-type cytochrome K08738 CYC; cytochrome c D QMY55_19905 c-type cytochrome K08738 CYC; cytochrome c D QMY55_01560 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D QMY55_01570 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D QMY55_01565 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D QMY55_01555 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D QMY55_01575 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D QMY55_01540 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D QMY55_01550 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D QMY55_01545 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D QMY55_15455 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D QMY55_15650 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:crj00680] D QMY55_16700 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D QMY55_16705 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D QMY55_13265 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D QMY55_18715 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D QMY55_13270 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D QMY55_18720 formate dehydrogenase subunit gamma K00124 fdoH; formate dehydrogenase iron-sulfur subunit D QMY55_13275 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D QMY55_18710 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D QMY55_15850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D QMY55_18230 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D QMY55_06115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D QMY55_17595 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D QMY55_16610 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D QMY55_23620 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D QMY55_14525 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D QMY55_05435 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D QMY55_15575 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D QMY55_15580 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D QMY55_18530 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D QMY55_07295 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D QMY55_06425 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D QMY55_19370 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D QMY55_21195 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D QMY55_01230 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_09245 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_10705 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_07560 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D QMY55_10270 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:crj00910] D QMY55_01080 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D QMY55_17075 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D QMY55_00565 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D QMY55_05995 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D QMY55_16055 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D QMY55_03655 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D QMY55_03660 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D QMY55_02600 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D QMY55_02665 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:crj00920] D QMY55_10460 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D QMY55_15250 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D QMY55_10465 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D QMY55_10470 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D QMY55_10475 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D QMY55_15135 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D QMY55_18495 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D QMY55_15125 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein D QMY55_18505 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein D QMY55_15130 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D QMY55_18500 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D QMY55_15140 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D QMY55_00730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_14235 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_15230 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_15235 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_14225 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D QMY55_15220 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D QMY55_14230 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D QMY55_15215 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D QMY55_15225 FMNH2-dependent alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D QMY55_15240 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D QMY55_08905 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D QMY55_15300 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D QMY55_15295 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D QMY55_16500 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D QMY55_08895 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D QMY55_15290 phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D QMY55_00175 sulfite oxidase K00387 SUOX; sulfite oxidase [EC:1.8.3.1] D QMY55_18790 thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D QMY55_18795 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D QMY55_14985 flavodoxin domain-containing protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D QMY55_15280 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D QMY55_22285 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D QMY55_18765 FCSD flavin-binding domain-containing protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D QMY55_18760 c-type cytochrome K17230 fccA; cytochrome subunit of sulfide dehydrogenase D QMY55_11470 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A D QMY55_11480 4Fe-4S dicluster domain-containing protein K08358 ttrB; tetrathionate reductase subunit B D QMY55_11475 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C D QMY55_06665 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D QMY55_17580 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D QMY55_15200 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D QMY55_17355 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D QMY55_20445 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D QMY55_24090 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D QMY55_07370 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D QMY55_06475 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D QMY55_14400 3-(methylthio)propionyl-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D QMY55_09095 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D QMY55_17080 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D QMY55_20680 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D QMY55_20410 crotonase/enoyl-CoA hydratase family protein K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:crj00061] D QMY55_06510 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D QMY55_20175 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D QMY55_20170 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D QMY55_05500 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D QMY55_03090 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D QMY55_05350 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D QMY55_05340 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D QMY55_02345 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D QMY55_05335 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D QMY55_19530 iron-containing redox enzyme family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D QMY55_20940 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D QMY55_05355 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D QMY55_08885 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D QMY55_04715 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_05345 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_06855 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_09380 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_14250 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_20945 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D QMY55_15730 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D QMY55_09730 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D QMY55_12370 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D QMY55_09455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_10415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_11960 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21000 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21425 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21725 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_23610 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:crj00071] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09035 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_20665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_14355 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_14805 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_20670 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_02700 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D QMY55_01905 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D QMY55_09435 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D QMY55_14495 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D QMY55_09375 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D QMY55_17765 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D QMY55_09455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_10415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_11960 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21000 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21425 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21725 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_23610 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_16700 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D QMY55_21090 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:crj00561] D QMY55_18230 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_21905 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D QMY55_05330 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D QMY55_09575 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D QMY55_19810 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D QMY55_20930 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D QMY55_15420 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:crj00564] D QMY55_19350 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D QMY55_21890 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D QMY55_09575 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D QMY55_19810 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D QMY55_20930 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D QMY55_15420 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D QMY55_01925 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D QMY55_00645 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D QMY55_04090 ugpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D QMY55_15760 CDP-archaeol synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D QMY55_15380 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D QMY55_09280 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D QMY55_22480 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D QMY55_22890 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D QMY55_00640 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D QMY55_13855 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D QMY55_05730 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] D QMY55_16210 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] D QMY55_08740 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism [PATH:crj00565] D QMY55_01925 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D QMY55_01925 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D QMY55_01925 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:crj00592] D QMY55_01925 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D QMY55_09035 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_20665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:crj01040] D QMY55_04835 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D QMY55_13940 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D QMY55_20635 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:crj00230] D QMY55_10660 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D QMY55_04250 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D QMY55_07365 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D QMY55_13695 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D QMY55_04815 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D QMY55_05460 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D QMY55_09300 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D QMY55_17860 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D QMY55_23415 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D QMY55_23410 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D QMY55_23805 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D QMY55_24265 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D QMY55_19910 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D QMY55_24130 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D QMY55_03325 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D QMY55_15860 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D QMY55_16190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D QMY55_07335 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D QMY55_12080 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D QMY55_14065 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D QMY55_16160 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D QMY55_18410 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D QMY55_02975 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D QMY55_02980 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D QMY55_14080 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D QMY55_05055 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D QMY55_18065 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D QMY55_18430 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D QMY55_10515 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D QMY55_20140 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D QMY55_20145 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D QMY55_03600 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D QMY55_18440 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D QMY55_15645 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D QMY55_10325 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D QMY55_20770 CHASE2 domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D QMY55_16085 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D QMY55_20155 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20] D QMY55_21330 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D QMY55_18110 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D QMY55_18585 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D QMY55_10735 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D QMY55_18025 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D QMY55_08905 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D QMY55_16500 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D QMY55_15300 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D QMY55_15295 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D QMY55_01805 NAD(P)/FAD-dependent oxidoreductase K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D QMY55_04765 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D QMY55_04770 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D QMY55_18200 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D QMY55_04785 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D QMY55_13895 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3] D QMY55_18240 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5] D QMY55_08815 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D QMY55_08820 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D QMY55_08830 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:crj00240] D QMY55_15700 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D QMY55_15705 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D QMY55_19820 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D QMY55_19205 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D QMY55_19815 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D QMY55_20525 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D QMY55_11500 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D QMY55_01195 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D QMY55_24360 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D QMY55_15775 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D QMY55_16160 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D QMY55_13675 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D QMY55_07080 DUF45 domain-containing protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D QMY55_06130 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D QMY55_03325 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D QMY55_15860 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D QMY55_16190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D QMY55_07335 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D QMY55_13725 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D QMY55_19825 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D QMY55_18585 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D QMY55_18060 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D QMY55_10515 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D QMY55_20140 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D QMY55_20145 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D QMY55_08260 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D QMY55_06145 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D QMY55_15985 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D QMY55_13890 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D QMY55_18245 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:crj00250] D QMY55_18055 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D QMY55_10730 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D QMY55_01980 asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D QMY55_05620 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D QMY55_23715 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D QMY55_07330 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D QMY55_05130 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D QMY55_16085 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D QMY55_24265 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D QMY55_19820 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D QMY55_17905 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D QMY55_00750 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D QMY55_00340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_03200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_17895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_03655 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D QMY55_03660 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D QMY55_00565 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D QMY55_05995 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D QMY55_15115 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D QMY55_16055 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D QMY55_15700 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D QMY55_15705 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D QMY55_03040 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D QMY55_07365 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:crj00260] D QMY55_06520 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D QMY55_05530 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D QMY55_05625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D QMY55_05075 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D QMY55_05635 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D QMY55_15850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D QMY55_02770 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D QMY55_07505 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D QMY55_18230 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D QMY55_19370 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D QMY55_21195 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D QMY55_01230 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_09245 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_10705 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_07560 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D QMY55_10270 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D QMY55_13080 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D QMY55_13065 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13070 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D QMY55_15380 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D QMY55_00245 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D QMY55_03430 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D QMY55_21630 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D QMY55_05505 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D QMY55_00650 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D QMY55_05510 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:crj00270] D QMY55_15200 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D QMY55_17355 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D QMY55_20445 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D QMY55_13955 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D QMY55_00625 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D QMY55_00925 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D QMY55_11140 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D QMY55_03500 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D QMY55_09590 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D QMY55_22835 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D QMY55_23580 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D QMY55_12080 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D QMY55_00695 MtnX-like HAD-IB family phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D QMY55_10930 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D QMY55_22060 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D QMY55_02930 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D QMY55_06520 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D QMY55_05530 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D QMY55_05625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D QMY55_24090 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D QMY55_09350 aminotransferase class V-fold PLP-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D QMY55_15885 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D QMY55_07370 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D QMY55_00545 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D QMY55_16385 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D QMY55_23325 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D QMY55_23310 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D QMY55_06665 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D QMY55_17580 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D QMY55_16610 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D QMY55_17675 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D QMY55_01230 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_09245 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_10705 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_07560 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:crj00280] D QMY55_00545 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_02700 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D QMY55_01905 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D QMY55_09435 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D QMY55_14495 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D QMY55_09375 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D QMY55_02595 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_09035 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_20665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_11930 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D QMY55_11935 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D QMY55_03090 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D QMY55_11945 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D QMY55_13455 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D QMY55_21755 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D QMY55_13425 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_09875 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-] D QMY55_24035 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D QMY55_00750 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D QMY55_02765 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D QMY55_02745 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D QMY55_02755 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D QMY55_02775 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_08725 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_09710 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_11250 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D QMY55_11255 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D QMY55_00395 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D QMY55_06605 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:crj00290] D QMY55_00245 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D QMY55_03430 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D QMY55_05545 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D QMY55_05540 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D QMY55_05535 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D QMY55_14835 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_15395 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_23560 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_15390 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D QMY55_15385 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D QMY55_09850 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D QMY55_00545 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D QMY55_05620 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D QMY55_11395 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D QMY55_15370 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D QMY55_15375 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:crj00300] D QMY55_05625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D QMY55_06520 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D QMY55_05530 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D QMY55_06245 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D QMY55_23845 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D QMY55_12010 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D QMY55_17920 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D QMY55_12005 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D QMY55_12020 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D QMY55_20375 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D QMY55_19340 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D QMY55_16330 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D QMY55_02120 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D QMY55_10065 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D QMY55_20315 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D QMY55_20310 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:crj00310] D QMY55_13470 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D QMY55_13250 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_17765 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_17905 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D QMY55_00750 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D QMY55_00340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_03200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_17895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_18075 glaH; glutarate dioxygenase GlaH K15737 csiD; glutarate dioxygenase [EC:1.14.11.64] D QMY55_03130 VOC family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D QMY55_17770 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D QMY55_23490 Ldh family oxidoreductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D QMY55_18045 delta(1)-pyrroline-2-carboxylate reductase family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:crj00220] D QMY55_17925 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D QMY55_07330 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D QMY55_05130 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D QMY55_20535 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D QMY55_08815 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D QMY55_08820 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D QMY55_08830 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D QMY55_01980 asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D QMY55_16055 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D QMY55_15700 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D QMY55_15705 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D QMY55_00565 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D QMY55_05995 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D QMY55_05620 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D QMY55_10525 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D QMY55_03935 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D QMY55_20710 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D QMY55_24395 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D QMY55_17920 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:crj00330] D QMY55_02080 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D QMY55_09690 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D QMY55_09590 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D QMY55_22835 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_22620 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D QMY55_20535 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D QMY55_21920 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D QMY55_15115 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D QMY55_20530 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12] D QMY55_04005 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D QMY55_23340 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D QMY55_05275 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D QMY55_18045 delta(1)-pyrroline-2-carboxylate reductase family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] C 00340 Histidine metabolism [PATH:crj00340] D QMY55_03770 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D QMY55_16090 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D QMY55_03835 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D QMY55_03830 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D QMY55_19215 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D QMY55_22235 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D QMY55_03815 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D QMY55_03810 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D QMY55_03825 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D QMY55_03805 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D QMY55_00895 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_03800 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10020 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_03775 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D QMY55_00860 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D QMY55_00875 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D QMY55_00885 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D QMY55_00900 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D QMY55_00905 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_08960 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:crj00350] D QMY55_00895 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_03800 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10020 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10930 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D QMY55_18680 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D QMY55_20970 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D QMY55_12085 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D QMY55_18670 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D QMY55_21555 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D QMY55_16700 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D QMY55_21090 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D QMY55_00325 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D QMY55_00315 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D QMY55_10910 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D QMY55_00330 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D QMY55_18845 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D QMY55_00305 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D QMY55_00310 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D QMY55_00335 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D QMY55_00345 HpcH/HpaI aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D QMY55_00340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_03200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_17895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_13380 cupin domain-containing protein K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D QMY55_13390 maiA; maleylacetoacetate isomerase K01801 nagL; maleylpyruvate isomerase [EC:5.2.1.4] D QMY55_12090 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] D QMY55_13385 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:crj00360] D QMY55_20985 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D QMY55_02005 paaF; phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D QMY55_02000 paaI; hydroxyphenylacetyl-CoA thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D QMY55_02010 paaA; 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D QMY55_02015 paaB; 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D QMY55_02020 paaC; phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D QMY55_02025 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D QMY55_02030 paaK; phenylacetate-CoA oxygenase/reductase subunit PaaK K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D QMY55_01995 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D QMY55_09365 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_21340 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D QMY55_00895 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_03800 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10020 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10930 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D QMY55_18680 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D QMY55_20970 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D QMY55_00300 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D QMY55_05245 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D QMY55_11240 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D QMY55_22620 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D QMY55_16295 FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D QMY55_00570 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:crj00380] D QMY55_18000 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D QMY55_17980 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D QMY55_17985 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D QMY55_13250 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_17765 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_22665 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D QMY55_22660 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D QMY55_22620 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D QMY55_11240 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:crj00400] D QMY55_20205 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D QMY55_23075 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D QMY55_03595 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D QMY55_16250 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D QMY55_20235 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D QMY55_03590 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D QMY55_07545 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D QMY55_15865 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D QMY55_22825 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D QMY55_21985 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D QMY55_21980 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D QMY55_05515 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D QMY55_21970 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D QMY55_05505 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D QMY55_00650 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D QMY55_05510 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D QMY55_07555 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D QMY55_07550 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D QMY55_00895 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_03800 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10020 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10930 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D QMY55_20985 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:crj00410] D QMY55_18840 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D QMY55_00750 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D QMY55_18900 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D QMY55_13890 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D QMY55_18245 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D QMY55_24035 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_02700 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D QMY55_09865 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D QMY55_13425 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:crj00430] D QMY55_18205 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D QMY55_24000 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D QMY55_15140 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D QMY55_18480 nuclear transport factor 2 family protein K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D QMY55_18485 FAD-binding oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-] D QMY55_18525 xsc; sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D QMY55_15580 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D QMY55_18530 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D QMY55_15575 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D QMY55_16715 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] C 00450 Selenocompound metabolism [PATH:crj00450] D QMY55_13955 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D QMY55_00625 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D QMY55_00925 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D QMY55_11140 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D QMY55_15190 family 2A encapsulin nanocompartment cargo protein cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D QMY55_04865 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D QMY55_15310 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D QMY55_08905 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D QMY55_15300 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D QMY55_15295 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D QMY55_13315 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D QMY55_13285 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D QMY55_18750 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:crj00460] D QMY55_18205 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D QMY55_24000 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D QMY55_10730 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D QMY55_15850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:crj00470] D QMY55_00975 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D QMY55_02640 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D QMY55_20280 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D QMY55_01980 asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D QMY55_07085 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D QMY55_20300 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D QMY55_21630 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D QMY55_21200 DSD1 family PLP-dependent enzyme K19967 dta; D-threonine aldolase [EC:4.1.2.42] D QMY55_20375 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D QMY55_19340 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D QMY55_24345 FAD-dependent oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D QMY55_23515 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D QMY55_23485 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D QMY55_00300 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D QMY55_05245 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:crj00480] D QMY55_18205 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D QMY55_24000 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D QMY55_11815 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D QMY55_22570 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D QMY55_03080 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D QMY55_11655 YbdK family carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D QMY55_16385 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D QMY55_23325 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D QMY55_23310 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D QMY55_10690 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D QMY55_14515 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D QMY55_00020 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_00100 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_01775 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_21075 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_24260 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_10485 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_00365 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D QMY55_13520 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D QMY55_13550 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D QMY55_23915 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D QMY55_01470 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D QMY55_09590 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D QMY55_22835 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D QMY55_02270 glycosyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:crj00540] D QMY55_15725 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D QMY55_20260 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D QMY55_15735 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D QMY55_06480 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D QMY55_15720 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D QMY55_10750 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D QMY55_24125 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D QMY55_06125 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D QMY55_22680 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D QMY55_24120 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D QMY55_10740 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D QMY55_11750 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D QMY55_03505 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D QMY55_03510 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D QMY55_23125 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D QMY55_21485 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D QMY55_00060 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D QMY55_21765 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D QMY55_20935 HAD-IIIA family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D QMY55_00525 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:crj00541] D QMY55_17660 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D QMY55_17275 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D QMY55_20915 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D QMY55_00500 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D QMY55_00505 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D QMY55_20890 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D QMY55_20900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D QMY55_20885 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D QMY55_20895 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D QMY55_17825 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D QMY55_11745 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D QMY55_03020 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D QMY55_20825 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:crj00550] D QMY55_03765 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D QMY55_09615 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D QMY55_20285 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D QMY55_20300 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D QMY55_20315 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D QMY55_20280 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D QMY55_20310 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D QMY55_15765 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D QMY55_17435 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D QMY55_23635 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D QMY55_23645 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D QMY55_20305 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D QMY55_20290 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D QMY55_20240 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D QMY55_03560 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D QMY55_23920 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D QMY55_05180 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D QMY55_01305 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D QMY55_20320 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D QMY55_01390 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D QMY55_23460 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:crj00552] D QMY55_17435 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D QMY55_23635 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D QMY55_23645 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:crj00543] D QMY55_15200 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D QMY55_17355 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:crj00730] D QMY55_17345 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D QMY55_14455 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D QMY55_19875 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D QMY55_10945 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D QMY55_14460 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D QMY55_17555 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D QMY55_14470 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D QMY55_14475 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D QMY55_22880 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D QMY55_04965 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D QMY55_03615 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_03620 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_10735 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D QMY55_05445 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D QMY55_17710 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:crj00740] D QMY55_16400 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D QMY55_05735 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D QMY55_06675 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D QMY55_16405 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D QMY55_17805 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D QMY55_03110 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D QMY55_04750 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D QMY55_15240 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D QMY55_10010 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D QMY55_10660 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:crj00750] D QMY55_11800 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D QMY55_06335 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D QMY55_07560 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D QMY55_03885 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D QMY55_05410 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D QMY55_05635 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:crj00760] D QMY55_18055 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D QMY55_23590 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D QMY55_18050 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D QMY55_19970 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D QMY55_03485 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D QMY55_07495 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D QMY55_22550 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D QMY55_03325 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D QMY55_15860 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D QMY55_16190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D QMY55_03475 bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D QMY55_03480 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D QMY55_15435 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D QMY55_22895 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D QMY55_04320 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D QMY55_01170 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D QMY55_01175 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D QMY55_00775 (2Fe-2S)-binding protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1] D QMY55_18335 (2Fe-2S)-binding protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1] D QMY55_00770 c-type cytochrome K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] D QMY55_00805 molybdopterin-dependent oxidoreductase K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] D QMY55_18340 molybdopterin-dependent oxidoreductase K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] D QMY55_00780 FAD-dependent monooxygenase K14974 nicC; 6-hydroxynicotinate 3-monooxygenase [EC:1.14.13.114] D QMY55_00795 2,5-dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9] D QMY55_00790 alpha/beta hydrolase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106] D QMY55_00800 N-carbamoylsarcosine amidohydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D QMY55_00785 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D QMY55_13875 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D QMY55_00340 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_03200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D QMY55_17895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:crj00770] D QMY55_14835 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_15395 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_23560 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D QMY55_15390 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D QMY55_15385 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D QMY55_09850 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D QMY55_18890 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D QMY55_06455 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D QMY55_19450 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D QMY55_18900 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D QMY55_20905 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D QMY55_06135 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D QMY55_19420 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D QMY55_03960 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D QMY55_05415 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D QMY55_02855 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D QMY55_00545 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D QMY55_13890 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D QMY55_18245 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D QMY55_18840 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:crj00780] D QMY55_19615 class I SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D QMY55_20940 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D QMY55_05355 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D QMY55_08885 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D QMY55_04715 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_05345 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_06855 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_09380 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_14250 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_15730 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D QMY55_09730 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D QMY55_00955 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D QMY55_00945 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D QMY55_00950 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D QMY55_00940 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D QMY55_24455 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:crj00785] D QMY55_01525 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D QMY55_01520 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D QMY55_22490 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D QMY55_11050 ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_11540 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D QMY55_11545 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D QMY55_13255 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D QMY55_13250 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D QMY55_13080 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D QMY55_13065 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D QMY55_13070 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:crj00790] D QMY55_04185 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D QMY55_19170 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D QMY55_03615 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_03620 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_16205 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D QMY55_19885 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D QMY55_04175 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D QMY55_21120 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D QMY55_17840 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D QMY55_15660 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D QMY55_04440 folP; dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D QMY55_12310 folP; dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D QMY55_12390 sul1; sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D QMY55_15990 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D QMY55_12275 dfrA16; trimethoprim-resistant dihydrofolate reductase DfrA16 K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3] D QMY55_07350 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D QMY55_16400 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D QMY55_18875 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D QMY55_18870 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D QMY55_18830 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D QMY55_04970 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D QMY55_20985 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D QMY55_18825 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D QMY55_21070 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D QMY55_05270 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D QMY55_15475 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D QMY55_24300 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D QMY55_05675 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D QMY55_17330 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D QMY55_05645 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D QMY55_15485 molybdopterin-binding protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D QMY55_11805 NTP transferase domain-containing protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D QMY55_15480 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:crj00670] D QMY55_15990 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D QMY55_12275 dfrA16; trimethoprim-resistant dihydrofolate reductase DfrA16 K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3] D QMY55_11525 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D QMY55_15850 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D QMY55_04815 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D QMY55_19910 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D QMY55_24160 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D QMY55_13065 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D QMY55_00625 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D QMY55_00925 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D QMY55_15985 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D QMY55_21600 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D QMY55_02940 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D QMY55_21060 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:crj00860] D QMY55_07375 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D QMY55_04055 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D QMY55_19880 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D QMY55_01365 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D QMY55_17600 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D QMY55_17605 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D QMY55_01990 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D QMY55_13690 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D QMY55_09935 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D QMY55_01370 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D QMY55_06670 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D QMY55_17610 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D QMY55_17165 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D QMY55_12780 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D QMY55_19565 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D QMY55_12775 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D QMY55_10675 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D QMY55_08170 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D QMY55_08180 nitrite reductase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D QMY55_08165 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D QMY55_08145 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D QMY55_08140 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D QMY55_08160 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D QMY55_08155 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D QMY55_08175 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D QMY55_09975 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D QMY55_13585 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D QMY55_19145 cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D QMY55_18515 AAA family ATPase K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D QMY55_18510 cobalt chelatase K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D QMY55_00220 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D QMY55_10000 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D QMY55_10035 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D QMY55_04960 CobD/CbiB family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D QMY55_10015 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D QMY55_09980 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D QMY55_03425 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D QMY55_10045 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D QMY55_03420 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D QMY55_13590 ATP-binding protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D QMY55_10855 pyridoxamine 5'-phosphate oxidase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D QMY55_06360 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D QMY55_16570 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:crj00130] D QMY55_01915 thioesterase family protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D QMY55_21925 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D QMY55_07575 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D QMY55_04130 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D QMY55_03440 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D QMY55_00420 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D QMY55_13985 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D QMY55_17215 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D QMY55_18680 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D QMY55_20970 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:crj00900] D QMY55_17555 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D QMY55_15755 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D QMY55_10285 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D QMY55_04260 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D QMY55_10290 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D QMY55_16140 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D QMY55_18550 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_17560 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D QMY55_03985 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D QMY55_15765 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D QMY55_04975 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:crj00906] D QMY55_06705 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:crj00907] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_09410 SDR family oxidoreductase K13774 atuB; citronellol/citronellal dehydrogenase D QMY55_09420 acyl-CoA dehydrogenase family protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-] D QMY55_09430 biotin carboxylase N-terminal domain-containing protein K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5] D QMY55_09415 carboxyl transferase domain-containing protein K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5] D QMY55_09425 enoyl-CoA hydratase-related protein K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57] D QMY55_02775 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_08725 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_09710 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D QMY55_09035 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_20665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D QMY55_23680 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:crj00523] D QMY55_20890 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D QMY55_20900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D QMY55_20885 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D QMY55_20895 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D QMY55_22820 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics [PATH:crj01055] D QMY55_15020 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D QMY55_20900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:crj00311] D QMY55_09550 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D QMY55_10500 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:crj00332] D QMY55_04005 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D QMY55_23340 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:crj00261] D QMY55_15020 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D QMY55_08905 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D QMY55_15300 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D QMY55_15295 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D QMY55_06520 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D QMY55_05530 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D QMY55_06245 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D QMY55_23845 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:crj00521] D QMY55_17365 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D QMY55_20890 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D QMY55_20900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D QMY55_20885 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D QMY55_20895 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:crj00525] D QMY55_20890 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D QMY55_20900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:crj00401] D QMY55_07550 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D QMY55_00895 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_03800 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10020 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10930 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D QMY55_22825 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D QMY55_21985 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D QMY55_05340 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D QMY55_04715 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_05345 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_06855 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_09380 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_14250 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_09730 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D QMY55_05350 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:crj00999] D QMY55_03500 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D QMY55_20235 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:crj00362] D QMY55_09035 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_20665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_03645 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D QMY55_00570 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D QMY55_07020 fumarylacetoacetate hydrolase family protein K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D QMY55_07010 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D QMY55_07015 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D QMY55_23195 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D QMY55_23200 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D QMY55_24790 hydratase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D QMY55_10900 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D QMY55_10905 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D QMY55_10910 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D QMY55_10895 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D QMY55_10880 amidohydrolase family protein K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D QMY55_19195 PIG-L deacetylase family protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83] D QMY55_09240 RraA family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D QMY55_10885 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D QMY55_13145 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D QMY55_13375 3-hydroxybenzoate 6-monooxygenase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24] D QMY55_01915 thioesterase family protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D QMY55_00450 benzoate-CoA ligase family protein K04110 badA; benzoate-CoA ligase [EC:6.2.1.25] D QMY55_14355 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_14805 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_20670 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D QMY55_17765 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_21340 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_00230 boxA; benzoyl-CoA 2,3-epoxidase subunit BoxA K15511 boxA; benzoyl-CoA 2,3-epoxidase subunit A [EC:1.14.13.208] D QMY55_00235 boxB; benzoyl-CoA 2,3-epoxidase subunit BoxB K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208] D QMY55_00455 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase K15514 boxD; 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [EC:1.2.1.77] D QMY55_00240 boxC; 2,3-epoxybenzoyl-CoA dihydrolase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] C 00627 Aminobenzoate degradation [PATH:crj00627] D QMY55_22665 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D QMY55_22660 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D QMY55_22620 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D QMY55_00450 benzoate-CoA ligase family protein K04110 badA; benzoate-CoA ligase [EC:6.2.1.25] D QMY55_20035 mdlC; benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7] D QMY55_06170 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D QMY55_06220 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D QMY55_01910 benzoate-CoA ligase family protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32] D QMY55_01890 bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40] D QMY55_20615 aromatic ring-hydroxylating dioxygenase subunit alpha K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D QMY55_20595 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit D QMY55_10900 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D QMY55_10905 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D QMY55_10910 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D QMY55_10895 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:crj00364] D QMY55_01350 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D QMY55_05105 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D QMY55_22665 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D QMY55_22660 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] C 00625 Chloroalkane and chloroalkene degradation [PATH:crj00625] D QMY55_21090 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D QMY55_16700 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D QMY55_01005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:crj00361] D QMY55_01350 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D QMY55_05105 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D QMY55_23530 PDR/VanB family oxidoreductase K21607 pcpD; tetrachlorobenzoquinone reductase [EC:1.1.1.404] C 00623 Toluene degradation [PATH:crj00623] D QMY55_06170 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D QMY55_06220 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D QMY55_06205 FAD-binding oxidoreductase K05797 pchF; 4-cresol dehydrogenase (hydroxylating) flavoprotein subunit [EC:1.17.9.1] D QMY55_06215 cytochrome c K20200 pchC; 4-cresol dehydrogenase (hydroxylating) cytochrome subunit D QMY55_01350 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D QMY55_05105 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:crj00622] D QMY55_06170 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D QMY55_06220 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D QMY55_23195 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D QMY55_23200 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D QMY55_24790 hydratase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D QMY55_07020 fumarylacetoacetate hydrolase family protein K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D QMY55_07010 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D QMY55_07015 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D QMY55_00570 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation [PATH:crj00633] D QMY55_00095 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D QMY55_06790 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D QMY55_11015 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D QMY55_09035 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D QMY55_20665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:crj00643] D QMY55_12085 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D QMY55_18670 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D QMY55_21555 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D QMY55_22665 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D QMY55_22660 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D QMY55_22620 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D QMY55_06805 ketoacid CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation D QMY55_08815 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D QMY55_08820 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D QMY55_08830 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:crj00930] D QMY55_22640 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D QMY55_06910 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D QMY55_20010 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation D QMY55_13055 2,4'-dihydroxyacetophenone dioxygenase family protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41] C 00621 Dioxin degradation [PATH:crj00621] D QMY55_23195 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D QMY55_23200 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D QMY55_24790 hydratase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D QMY55_00570 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D QMY55_07020 fumarylacetoacetate hydrolase family protein K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D QMY55_07010 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D QMY55_07015 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00626 Naphthalene degradation [PATH:crj00626] D QMY55_21090 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D QMY55_16700 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D QMY55_10900 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D QMY55_10905 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] C 00365 Furfural degradation C 00984 Steroid degradation [PATH:crj00984] D QMY55_07040 FAD-dependent oxidoreductase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D QMY55_06885 Rieske 2Fe-2S domain-containing protein K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D QMY55_07050 ferredoxin--NADP reductase K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30] D QMY55_07035 acyl-CoA dehydrogenase family protein K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] D QMY55_07030 flavin reductase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-] D QMY55_06795 VOC family protein K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D QMY55_07025 alpha/beta hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17] D QMY55_07055 FadD3 family acyl-CoA ligase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] D QMY55_09630 SDR family oxidoreductase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51] D QMY55_06900 steroid Delta-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] D QMY55_07045 FAD-binding protein K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:crj03020] D QMY55_01705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D QMY55_01710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D QMY55_21810 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D QMY55_18435 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D QMY55_11365 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:crj03010] D QMY55_07540 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D QMY55_15785 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D QMY55_01450 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D QMY55_21815 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D QMY55_21850 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D QMY55_05575 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D QMY55_01400 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D QMY55_21865 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D QMY55_02960 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D QMY55_01415 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D QMY55_21820 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D QMY55_01395 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D QMY55_21825 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D QMY55_21870 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D QMY55_05775 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D QMY55_04935 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D QMY55_01465 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D QMY55_05585 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D QMY55_01440 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D QMY55_17880 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D QMY55_17190 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D QMY55_01690 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D QMY55_01435 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D QMY55_01420 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D QMY55_01425 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D QMY55_21875 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D QMY55_21860 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D QMY55_01700 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D QMY55_05590 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D QMY55_01695 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D QMY55_01685 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D QMY55_02955 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D QMY55_21885 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D QMY55_21840 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D QMY55_01455 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D QMY55_21805 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D QMY55_21855 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D QMY55_04950 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D QMY55_14925 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D QMY55_03990 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D QMY55_01445 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D QMY55_01430 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D QMY55_21880 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D QMY55_04245 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D QMY55_03995 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D QMY55_04860 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D QMY55_01460 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D QMY55_21845 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D QMY55_15595 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D QMY55_05325 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D QMY55_04855 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D QMY55_24510 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D QMY55_14930 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D QMY55_21830 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:crj00970] D QMY55_07380 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D QMY55_07405 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D QMY55_07420 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D QMY55_07460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D QMY55_04515 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D QMY55_19690 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D QMY55_20750 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D QMY55_13355 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D QMY55_18330 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D QMY55_17680 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D QMY55_05800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D QMY55_15805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D QMY55_01735 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D QMY55_01740 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D QMY55_18540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D QMY55_13295 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D QMY55_07375 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D QMY55_01280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D QMY55_15790 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D QMY55_16920 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D QMY55_01275 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D QMY55_01285 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D QMY55_16260 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D QMY55_14030 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D QMY55_04165 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D QMY55_20840 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D QMY55_20835 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D QMY55_14940 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D QMY55_19200 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D QMY55_18545 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D QMY55_13285 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D QMY55_06500 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D QMY55_19180 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D QMY55_18750 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D QMY55_24160 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D QMY55_17655 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D QMY55_23365 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D QMY55_04745 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D QMY55_05485 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D QMY55_23155 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D QMY55_04015 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D QMY55_16135 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D QMY55_14920 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D QMY55_14915 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D QMY55_03005 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D QMY55_04540 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:crj03060] D QMY55_21835 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D QMY55_01675 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D QMY55_05795 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D QMY55_24195 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D QMY55_24190 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D QMY55_24200 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D QMY55_24495 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D QMY55_03930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D QMY55_19355 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D QMY55_20110 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D QMY55_19440 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D QMY55_03855 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D QMY55_03860 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D QMY55_03865 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D QMY55_05385 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D QMY55_04740 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:crj04122] D QMY55_10945 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D QMY55_06665 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D QMY55_17580 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D QMY55_17665 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D QMY55_23960 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D QMY55_05675 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D QMY55_15475 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D QMY55_05650 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D QMY55_19380 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D QMY55_24300 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D QMY55_17330 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D QMY55_14465 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:crj03018] D QMY55_04010 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D QMY55_05285 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D QMY55_06115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D QMY55_05780 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D QMY55_08020 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D QMY55_18030 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D QMY55_16655 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D QMY55_15800 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D QMY55_00815 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D QMY55_15545 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D QMY55_05565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D QMY55_03455 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D QMY55_16115 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D QMY55_15650 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D QMY55_17845 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:crj03030] D QMY55_00355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_02820 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_10975 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_13215 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D QMY55_15525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D QMY55_08265 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D QMY55_23355 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D QMY55_10695 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D QMY55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D QMY55_05595 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D QMY55_06470 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D QMY55_12715 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_22050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_24325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_04030 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D QMY55_15495 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D QMY55_15715 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D QMY55_05085 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D QMY55_12830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:crj03410] D QMY55_10050 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D QMY55_21960 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D QMY55_04285 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D QMY55_04275 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D QMY55_06505 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D QMY55_17990 DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D QMY55_19890 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D QMY55_01190 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D QMY55_16030 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D QMY55_05085 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D QMY55_04640 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D QMY55_12830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:crj03420] D QMY55_10280 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D QMY55_02845 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D QMY55_24335 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D QMY55_10935 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D QMY55_08735 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D QMY55_05060 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D QMY55_14845 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D QMY55_05085 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D QMY55_12830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D QMY55_11365 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:crj03430] D QMY55_17410 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D QMY55_06015 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D QMY55_05060 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D QMY55_14845 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D QMY55_13820 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D QMY55_10765 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D QMY55_17565 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D QMY55_04640 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D QMY55_12715 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_22050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_24325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_13215 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D QMY55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D QMY55_15525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D QMY55_23355 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D QMY55_08265 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D QMY55_00355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_02820 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_10975 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_10695 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D QMY55_12830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:crj03440] D QMY55_04640 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D QMY55_12715 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_22050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_24325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_05405 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D QMY55_15515 recR; recombination mediator RecR K06187 recR; recombination protein RecR D QMY55_24425 recA; recombinase RecA K03553 recA; recombination protein RecA D QMY55_05085 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D QMY55_21260 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D QMY55_21245 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D QMY55_20245 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D QMY55_21945 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D QMY55_01755 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D QMY55_01750 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D QMY55_01760 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D QMY55_13215 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D QMY55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D QMY55_15525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D QMY55_23355 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D QMY55_08265 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D QMY55_00355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_02820 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_10975 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_10695 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D QMY55_01985 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D QMY55_05580 priB; primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D QMY55_02270 glycosyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:crj03250] D QMY55_06490 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:crj02010] D QMY55_10460 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D QMY55_15250 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D QMY55_10465 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D QMY55_10470 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D QMY55_10475 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D QMY55_03210 tungsten ABC transporter permease K05772 tupA; tungstate transport system substrate-binding protein D QMY55_15135 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D QMY55_18495 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D QMY55_15125 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein D QMY55_18505 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein D QMY55_15130 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D QMY55_18500 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D QMY55_00730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_14235 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_15230 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_15235 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_14225 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D QMY55_15220 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D QMY55_14230 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D QMY55_15215 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D QMY55_10870 extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein D QMY55_20050 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D QMY55_23775 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein D QMY55_20055 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D QMY55_20060 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D QMY55_02100 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D QMY55_20875 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D QMY55_02105 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D QMY55_20865 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D QMY55_02110 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D QMY55_20870 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D QMY55_07265 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D QMY55_07270 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D QMY55_07275 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D QMY55_07280 proW; glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein D QMY55_07285 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D QMY55_14500 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D QMY55_03740 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D QMY55_01330 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D QMY55_03730 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D QMY55_08115 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D QMY55_01320 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D QMY55_03725 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D QMY55_08110 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D QMY55_03745 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D QMY55_01325 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D QMY55_03720 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D QMY55_00215 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D QMY55_17185 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D QMY55_18120 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D QMY55_18125 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D QMY55_18135 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D QMY55_18130 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D QMY55_18140 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D QMY55_04110 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D QMY55_05150 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D QMY55_04105 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D QMY55_05155 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D QMY55_04100 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D QMY55_05160 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D QMY55_04095 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D QMY55_05145 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D QMY55_15640 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D QMY55_15635 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein D QMY55_15630 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D QMY55_15625 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D QMY55_14310 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D QMY55_16735 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D QMY55_14320 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D QMY55_16725 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D QMY55_14315 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D QMY55_16730 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D QMY55_20555 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D QMY55_20545 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D QMY55_20550 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D QMY55_20540 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D QMY55_16550 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D QMY55_16545 ABC transporter permease subunit K10006 gluC; glutamate transport system permease protein D QMY55_16540 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein D QMY55_07320 lysine/arginine/ornithine ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D QMY55_07325 transporter substrate-binding domain-containing protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D QMY55_07310 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein D QMY55_07315 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D QMY55_07305 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D QMY55_00445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_01110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_02040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_05910 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_06195 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_06615 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_09505 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_13095 high-affinity branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_14380 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_14385 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17135 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17335 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17800 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_21445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_21735 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_22600 transporter substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_00440 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_01105 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_02045 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_04895 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_05915 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_06190 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_06630 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_10105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_13100 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D QMY55_14375 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_21435 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_00435 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_02050 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_04900 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D QMY55_05920 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_06185 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_06635 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_10110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_13105 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D QMY55_14370 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_21440 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_00430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_01100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_04905 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_05900 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_06180 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_06620 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_10115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_13110 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_14365 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_21430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_00425 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_01095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_02055 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_04910 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_05905 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_06175 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_06625 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_10120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_13115 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_14360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_21450 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_08040 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D QMY55_08045 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D QMY55_10245 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D QMY55_10400 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D QMY55_10390 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D QMY55_10385 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D QMY55_08845 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D QMY55_08850 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D QMY55_08855 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D QMY55_08860 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D QMY55_08865 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D QMY55_09735 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D QMY55_09740 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D QMY55_09745 ABC transporter permease K13895 yejE; microcin C transport system permease protein D QMY55_09750 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D QMY55_08840 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein D QMY55_10420 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D QMY55_10425 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D QMY55_10430 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D QMY55_20815 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D QMY55_20810 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D QMY55_04665 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D QMY55_04670 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D QMY55_22735 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D QMY55_22730 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D QMY55_22725 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D QMY55_22720 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D QMY55_10685 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D QMY55_10680 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D QMY55_23135 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D QMY55_08285 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D QMY55_22930 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D QMY55_20625 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D QMY55_20460 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D QMY55_14865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D QMY55_20730 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D QMY55_20735 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D QMY55_16830 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D QMY55_16835 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D QMY55_04475 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D QMY55_12250 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D QMY55_05425 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D QMY55_05430 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:crj02060] D QMY55_01510 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D QMY55_01505 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D QMY55_01500 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D QMY55_23815 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:crj03070] D QMY55_11755 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_20720 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_22930 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D QMY55_03370 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D QMY55_03415 general secretion pathway protein C K02452 gspC; general secretion pathway protein C D QMY55_03335 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D QMY55_03410 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D QMY55_03405 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H D QMY55_03400 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D QMY55_03395 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D QMY55_03390 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D QMY55_03380 gspM; type II secretion system protein GspM K02462 gspM; general secretion pathway protein M D QMY55_03365 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D QMY55_04695 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D QMY55_12860 A24 family peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D QMY55_24195 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D QMY55_24190 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D QMY55_01675 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D QMY55_05795 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D QMY55_21835 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D QMY55_24200 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D QMY55_24495 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D QMY55_03930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D QMY55_19440 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D QMY55_19355 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D QMY55_20110 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D QMY55_03855 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D QMY55_03860 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D QMY55_03865 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D QMY55_16905 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D QMY55_19230 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:crj02020] D QMY55_15610 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D QMY55_15615 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D QMY55_03615 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_03620 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_16205 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D QMY55_19885 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D QMY55_15640 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D QMY55_10300 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D QMY55_10305 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D QMY55_05375 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D QMY55_19785 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D QMY55_04300 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D QMY55_04305 winged helix-turn-helix domain-containing protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D QMY55_17490 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D QMY55_17485 MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump D QMY55_17480 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump D QMY55_21660 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D QMY55_21650 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D QMY55_12795 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D QMY55_22565 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D QMY55_12800 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D QMY55_22560 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D QMY55_17585 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D QMY55_17590 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D QMY55_02355 flagellin K02406 fliC; flagellin D QMY55_02360 flagellin K02406 fliC; flagellin D QMY55_02365 flagellin K02406 fliC; flagellin D QMY55_02245 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D QMY55_02265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D QMY55_02920 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D QMY55_02925 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D QMY55_02900 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D QMY55_02910 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D QMY55_02905 kdpC; K(+)-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D QMY55_23175 response regulator transcription factor K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D QMY55_06575 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_14245 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_20695 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_06580 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D QMY55_20700 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D QMY55_04705 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D QMY55_06595 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D QMY55_04700 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D QMY55_06590 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D QMY55_06460 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D QMY55_06585 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D QMY55_12775 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D QMY55_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D QMY55_04415 MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit K18094 mexX; membrane fusion protein, multidrug efflux system D QMY55_04410 multidrug efflux RND transporter permease subunit K18095 mexY; multidrug efflux pump D QMY55_19925 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D QMY55_16600 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D QMY55_05120 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D QMY55_05115 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D QMY55_02455 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D QMY55_19390 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D QMY55_04615 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D QMY55_22945 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D QMY55_04630 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D QMY55_22955 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D QMY55_04625 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D QMY55_22960 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D QMY55_04595 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D QMY55_22965 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D QMY55_04590 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D QMY55_22970 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D QMY55_04585 type II secretion system F family protein K12510 tadB; tight adherence protein B D QMY55_22975 type II secretion system F family protein K12510 tadB; tight adherence protein B D QMY55_04580 type II secretion system F family protein K12511 tadC; tight adherence protein C D QMY55_22980 type II secretion system F family protein K12511 tadC; tight adherence protein C D QMY55_22985 hypothetical protein K27079 tadD; tight adherence protein D D QMY55_23005 pilus assembly protein TadG-related protein K27080 tadG; tight adherence protein G D QMY55_09290 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D QMY55_07455 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D QMY55_15430 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D QMY55_16045 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D QMY55_16040 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D QMY55_16055 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D QMY55_01725 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D QMY55_01730 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D QMY55_05655 TIGR00366 family protein K02106 atoE; short-chain fatty acids transporter D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_00635 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D QMY55_23040 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D QMY55_23060 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D QMY55_20125 histidine kinase dimerization/phospho-acceptor domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D QMY55_20130 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D QMY55_23130 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D QMY55_24315 pilin K02650 pilA; type IV pilus assembly protein PilA D QMY55_02485 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D QMY55_04570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_04675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_10575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_13710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_14505 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_16195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_16380 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_17415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_00090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_15450 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D QMY55_16465 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D QMY55_04575 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D QMY55_05260 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D QMY55_11685 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D QMY55_02480 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D QMY55_02475 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D QMY55_02255 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D QMY55_02470 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D QMY55_02495 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D QMY55_19850 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D QMY55_19855 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D QMY55_19865 response regulator K02657 pilG; twitching motility two-component system response regulator PilG D QMY55_19860 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D QMY55_24240 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D QMY55_24235 LuxR C-terminal-related transcriptional regulator K11712 dctR; two-component system, LuxR family, response regulator DctR D QMY55_20570 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D QMY55_03045 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D QMY55_23505 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D QMY55_11470 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A D QMY55_11480 4Fe-4S dicluster domain-containing protein K08358 ttrB; tetrathionate reductase subunit B D QMY55_11475 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C D QMY55_11115 ATP-binding protein K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D QMY55_11120 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR D QMY55_20540 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D QMY55_20545 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D QMY55_20550 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D QMY55_20555 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D QMY55_01980 asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D QMY55_10710 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_14485 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_15465 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_20780 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_21420 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_24140 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_13195 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D QMY55_13200 response regulator transcription factor K15012 regA; two-component system, response regulator RegA D QMY55_03895 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D QMY55_03900 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D QMY55_03905 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D QMY55_06320 cytochrome c family protein K08738 CYC; cytochrome c D QMY55_09815 c-type cytochrome K08738 CYC; cytochrome c D QMY55_19905 c-type cytochrome K08738 CYC; cytochrome c D QMY55_09895 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D QMY55_22685 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D QMY55_09900 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D QMY55_22690 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D QMY55_09905 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D QMY55_09910 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D QMY55_16825 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D QMY55_16820 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D QMY55_16815 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D QMY55_11755 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_20720 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_18655 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D QMY55_20825 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D QMY55_13780 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D QMY55_13775 FecR domain-containing protein K07165 fecR; transmembrane sensor D QMY55_02155 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:crj04148] D QMY55_20535 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D QMY55_03895 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:crj02024] D QMY55_16115 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D QMY55_22825 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D QMY55_21985 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D QMY55_20205 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D QMY55_23075 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D QMY55_12795 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D QMY55_22565 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D QMY55_12800 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D QMY55_22560 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D QMY55_17585 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D QMY55_17590 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D QMY55_02925 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D QMY55_16895 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D QMY55_19240 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D QMY55_16890 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D QMY55_19245 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D QMY55_16885 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD D QMY55_19250 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD D QMY55_16880 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D QMY55_19255 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D QMY55_16875 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D QMY55_19260 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D QMY55_16870 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D QMY55_19270 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D QMY55_16865 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D QMY55_19275 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D QMY55_16860 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D QMY55_19280 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D QMY55_16855 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI D QMY55_19285 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI D QMY55_00445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_01110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_02040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_05910 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_06195 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_06615 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_09505 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_13095 high-affinity branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_14380 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_14385 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17135 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17335 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17800 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_21445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_21735 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_22600 transporter substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_00440 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_01105 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_02045 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_04895 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_05915 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_06190 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_06630 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_10105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_13100 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D QMY55_14375 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_21435 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_00435 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_02050 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_04900 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D QMY55_05920 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_06185 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_06635 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_10110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_13105 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D QMY55_14370 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_21440 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_00430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_01100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_04905 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_05900 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_06180 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_06620 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_10115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_13110 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_14365 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_21430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_00425 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_01095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_02055 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_04910 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_05905 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_06175 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_06625 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_10120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_13115 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_14360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_21450 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_09455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_10415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_11960 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21000 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21425 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21725 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_23610 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_10710 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_14485 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_15465 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_20780 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_21420 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_24140 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_19155 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D QMY55_19160 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D QMY55_22215 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D QMY55_05735 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D QMY55_01625 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_04405 oprZ; multidrug efflux RND transporter outer membrane subunit OprZ K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_11315 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_14140 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_04210 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D QMY55_21190 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D QMY55_04230 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D QMY55_21185 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D QMY55_04225 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D QMY55_21180 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D QMY55_04220 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D QMY55_21175 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D QMY55_04215 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D QMY55_24495 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D QMY55_01675 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D QMY55_05795 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D QMY55_21835 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D QMY55_24200 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D QMY55_03930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D QMY55_19440 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D QMY55_19355 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D QMY55_20110 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:crj02030] D QMY55_04570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_04675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_10575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_13710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_14505 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_16195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_16380 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_17415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_00090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_15450 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D QMY55_16465 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D QMY55_04575 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D QMY55_05260 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D QMY55_11685 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D QMY55_02475 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D QMY55_02480 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D QMY55_02255 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D QMY55_02470 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D QMY55_02250 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D QMY55_02495 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D QMY55_02490 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D QMY55_02485 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D QMY55_02395 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D QMY55_02425 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D QMY55_02430 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D QMY55_02265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D QMY55_02260 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:crj02040] D QMY55_02385 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D QMY55_02390 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D QMY55_02395 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D QMY55_02400 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D QMY55_02405 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D QMY55_02410 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D QMY55_02420 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D QMY55_02425 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D QMY55_02430 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D QMY55_02435 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D QMY55_02440 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D QMY55_02445 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D QMY55_02450 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D QMY55_02230 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D QMY55_02225 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB D QMY55_02160 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D QMY55_02165 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D QMY55_02170 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D QMY55_02175 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD D QMY55_02180 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D QMY55_02185 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D QMY55_02190 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D QMY55_02195 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D QMY55_02200 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D QMY55_02205 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D QMY55_02210 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D QMY55_02215 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D QMY55_02355 flagellin K02406 fliC; flagellin D QMY55_02360 flagellin K02406 fliC; flagellin D QMY55_02365 flagellin K02406 fliC; flagellin D QMY55_02370 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D QMY55_02375 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D QMY55_02380 flagellar protein FliT K02423 fliT; flagellar protein FliT D QMY55_02265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D QMY55_02260 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D QMY55_02155 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D QMY55_06465 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D QMY55_17585 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D QMY55_17590 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D QMY55_23130 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D QMY55_02245 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D QMY55_06115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:crj04980] D QMY55_00220 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D QMY55_11940 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D QMY55_11945 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D QMY55_00625 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D QMY55_00925 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:crj01501] D QMY55_00485 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D QMY55_05420 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D QMY55_10495 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D QMY55_10500 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D QMY55_12870 RNA ligase RtcB family protein K18148 rtcB; release factor H-coupled RctB family protein D QMY55_04415 MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit K18094 mexX; membrane fusion protein, multidrug efflux system D QMY55_04410 multidrug efflux RND transporter permease subunit K18095 mexY; multidrug efflux pump D QMY55_01635 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_11775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_14150 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_01630 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D QMY55_01625 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_04405 oprZ; multidrug efflux RND transporter outer membrane subunit OprZ K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_11315 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_14140 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_11755 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_20720 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_03560 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D QMY55_23920 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D QMY55_01305 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D QMY55_20320 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D QMY55_09085 blaOXA; class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6] D QMY55_12290 OXA-5 family class D beta-lactamase OXA-129 K18792 blaOXA-10; beta-lactamase class D OXA-10 [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:crj01502] D QMY55_19925 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D QMY55_20280 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D QMY55_00975 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D QMY55_02640 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D QMY55_20310 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D QMY55_20305 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D QMY55_20290 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:crj01503] D QMY55_21485 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D QMY55_06035 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D QMY55_05375 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D QMY55_19785 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D QMY55_23145 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D QMY55_06490 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D QMY55_01635 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_11775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_14150 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_01630 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D QMY55_11755 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_20720 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_15725 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:crj01000] C 01001 Protein kinases [BR:crj01001] D QMY55_11580 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D QMY55_13865 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D QMY55_15610 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D QMY55_10300 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D QMY55_04300 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D QMY55_21660 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D QMY55_12795 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D QMY55_22565 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D QMY55_02920 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D QMY55_06575 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_14245 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_20695 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_19765 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D QMY55_23625 histidine kinase dimerization/phospho-acceptor domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D QMY55_05120 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D QMY55_16045 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D QMY55_01725 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D QMY55_20125 histidine kinase dimerization/phospho-acceptor domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D QMY55_02475 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D QMY55_24240 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D QMY55_13195 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:crj01009] D QMY55_02930 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D QMY55_21410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D QMY55_13230 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D QMY55_17960 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D QMY55_18415 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D QMY55_10270 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:crj01002] D QMY55_04740 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D QMY55_03965 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D QMY55_12860 A24 family peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D QMY55_04635 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D QMY55_22950 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D QMY55_03075 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D QMY55_14080 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D QMY55_07365 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D QMY55_03655 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D QMY55_03040 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D QMY55_23375 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D QMY55_22640 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D QMY55_14515 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D QMY55_11520 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D QMY55_19925 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D QMY55_19430 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D QMY55_19435 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D QMY55_10690 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D QMY55_00150 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D QMY55_12020 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D QMY55_21215 M20 aminoacylase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D QMY55_10080 M20 family metallopeptidase K12941 abgB; aminobenzoyl-glutamate utilization protein B D QMY55_09295 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D QMY55_16225 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D QMY55_23660 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D QMY55_15665 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D QMY55_04975 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D QMY55_18575 M48 family metalloprotease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D QMY55_20505 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D QMY55_24295 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D QMY55_15750 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D QMY55_05375 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D QMY55_19785 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D QMY55_03870 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-] D QMY55_21255 trypsin-like serine protease K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D QMY55_01390 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D QMY55_15365 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D QMY55_23460 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D QMY55_06735 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D QMY55_06745 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D QMY55_10725 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D QMY55_05385 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D QMY55_19375 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D QMY55_09550 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D QMY55_05305 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D QMY55_09515 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D QMY55_20345 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D QMY55_18205 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D QMY55_24000 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D QMY55_16490 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D QMY55_09470 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D QMY55_17320 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D QMY55_20210 tldD; metalloprotease TldD K03568 tldD; TldD protein D QMY55_05140 MG2 domain-containing protein K06894 yfhM; alpha-2-macroglobulin D QMY55_16100 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D QMY55_16105 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:crj01003] D QMY55_02270 glycosyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D QMY55_05000 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D QMY55_20240 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D QMY55_05180 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D QMY55_03560 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D QMY55_23920 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D QMY55_03695 pelF; GT4 family glycosyltransferase PelF K21011 pelF; polysaccharide biosynthesis protein PelF C 01005 Lipopolysaccharide biosynthesis proteins [BR:crj01005] D QMY55_15725 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D QMY55_15720 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D QMY55_20260 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D QMY55_15735 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D QMY55_06480 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D QMY55_10750 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D QMY55_03505 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D QMY55_03510 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D QMY55_23125 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D QMY55_11750 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D QMY55_00060 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D QMY55_21485 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D QMY55_06125 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D QMY55_22680 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D QMY55_10740 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D QMY55_24120 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D QMY55_24125 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D QMY55_00525 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D QMY55_21765 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D QMY55_20935 HAD-IIIA family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D QMY55_02140 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:crj01011] D QMY55_03765 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D QMY55_09615 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D QMY55_20285 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D QMY55_20300 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D QMY55_20315 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D QMY55_20280 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D QMY55_00975 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D QMY55_02640 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D QMY55_07085 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D QMY55_09515 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D QMY55_20305 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D QMY55_20290 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D QMY55_17435 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D QMY55_23635 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D QMY55_23645 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D QMY55_17875 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D QMY55_03560 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D QMY55_23920 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D QMY55_05180 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D QMY55_01305 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D QMY55_20320 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D QMY55_01390 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D QMY55_23460 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D QMY55_15365 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D QMY55_20240 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D QMY55_19925 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D QMY55_21055 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D QMY55_24220 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D QMY55_17125 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D QMY55_17130 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D QMY55_18445 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D QMY55_15510 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D QMY55_08255 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D QMY55_02945 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D QMY55_06035 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D QMY55_20135 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:crj01004] D QMY55_05340 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D QMY55_02345 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D QMY55_05335 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D QMY55_19530 iron-containing redox enzyme family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D QMY55_20940 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D QMY55_05355 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D QMY55_08885 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D QMY55_04715 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_05345 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_06855 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_09380 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_14250 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D QMY55_20945 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D QMY55_15730 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D QMY55_09730 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D QMY55_12370 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D QMY55_13940 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D QMY55_20635 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D QMY55_04835 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D QMY55_07295 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D QMY55_11740 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D QMY55_00395 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D QMY55_06605 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D QMY55_09455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_10415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_11960 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21000 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21425 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21725 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_23610 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_02735 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D QMY55_06945 long-chain-acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D QMY55_10860 long-chain fatty acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D QMY55_05330 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D QMY55_09575 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D QMY55_19810 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D QMY55_20930 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:crj01008] D QMY55_15020 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:crj01006] D QMY55_17560 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D QMY55_03985 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D QMY55_15765 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D QMY55_06705 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D QMY55_05945 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D QMY55_21925 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D QMY55_12780 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D QMY55_19565 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:crj01007] D QMY55_07375 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D QMY55_16260 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D QMY55_14010 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D QMY55_03005 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D QMY55_04540 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D QMY55_06500 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D QMY55_19180 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D QMY55_23155 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D QMY55_18750 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D QMY55_04745 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D QMY55_17655 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D QMY55_23365 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D QMY55_05485 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D QMY55_04165 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D QMY55_16135 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D QMY55_20840 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D QMY55_20835 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D QMY55_18545 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D QMY55_04015 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D QMY55_14940 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D QMY55_19200 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D QMY55_14030 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D QMY55_14920 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D QMY55_14915 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D QMY55_05620 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D QMY55_10930 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D QMY55_10665 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D QMY55_12005 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D QMY55_00895 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_03800 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_10020 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D QMY55_00955 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D QMY55_24035 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D QMY55_17905 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D QMY55_17920 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D QMY55_00750 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D QMY55_00945 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D QMY55_19880 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D QMY55_00545 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D QMY55_18875 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D QMY55_07560 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:crj00194] D QMY55_16395 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin D QMY55_01575 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D QMY55_01570 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D QMY55_01565 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D QMY55_01560 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D QMY55_01555 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D QMY55_01550 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D QMY55_01545 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D QMY55_01540 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D QMY55_01535 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:crj03000] D QMY55_22060 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D QMY55_11345 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D QMY55_05685 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D QMY55_17995 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D QMY55_03015 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D QMY55_03135 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D QMY55_04065 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D QMY55_21605 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D QMY55_11145 LysR substrate-binding domain-containing protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D QMY55_21940 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D QMY55_00295 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D QMY55_10205 HTH-type transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D QMY55_10670 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D QMY55_15210 CysB family HTH-type transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D QMY55_23965 LysR substrate-binding domain-containing protein K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC D QMY55_17200 LysR substrate-binding domain-containing protein K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D QMY55_10495 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D QMY55_13155 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D QMY55_12035 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D QMY55_20560 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D QMY55_24355 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D QMY55_16740 LysR substrate-binding domain-containing protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D QMY55_20880 LysR substrate-binding domain-containing protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D QMY55_17405 LysR substrate-binding domain-containing protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D QMY55_21895 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D QMY55_16780 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D QMY55_00820 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D QMY55_00855 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D QMY55_00865 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D QMY55_16615 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D QMY55_05205 lldR; transcriptional regulator LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D QMY55_00960 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D QMY55_18470 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D QMY55_20620 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D QMY55_04425 tetR(G); tetracycline resistance transcriptional repressor TetR(G) K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D QMY55_04495 tetR(A); tetracycline resistance transcriptional repressor TetR(A) K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D QMY55_12325 tetR(G); tetracycline resistance transcriptional repressor TetR(G) K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D QMY55_01640 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D QMY55_20690 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D QMY55_11430 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D QMY55_08880 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D QMY55_09650 TetR/AcrR family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D QMY55_09405 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D QMY55_03035 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_10220 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_10980 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_15110 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_20965 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_24210 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_10130 Lrp/AsnC family transcriptional regulator K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon D QMY55_03250 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D QMY55_07245 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D QMY55_00755 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D QMY55_21030 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D QMY55_00080 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D QMY55_18165 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D QMY55_21390 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D QMY55_19210 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D QMY55_23835 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D QMY55_19155 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D QMY55_19160 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D QMY55_22215 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D QMY55_13150 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D QMY55_15360 IclR family transcriptional regulator K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor D QMY55_10710 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_14485 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_15465 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_20780 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_21420 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_24140 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QMY55_09930 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D QMY55_10940 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D QMY55_12925 helix-turn-helix domain-containing protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D QMY55_22025 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D QMY55_19305 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D QMY55_00465 helix-turn-helix transcriptional regulator K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator D QMY55_11190 short-chain fatty acyl-CoA regulator family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D QMY55_16985 helix-turn-helix transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D QMY55_03640 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D QMY55_24455 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D QMY55_19915 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D QMY55_24705 type II toxin-antitoxin system MqsA family antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D QMY55_11575 helix-turn-helix transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D QMY55_11080 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D QMY55_00995 helix-turn-helix domain-containing protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D QMY55_21700 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D QMY55_13650 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D QMY55_20045 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D QMY55_08610 transcriptional regulator K07726 K07726; putative transcriptional regulator D QMY55_17060 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator D QMY55_24565 transcriptional regulator K07726 K07726; putative transcriptional regulator D QMY55_03165 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D QMY55_15115 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D QMY55_24575 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D QMY55_14420 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D QMY55_00140 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QMY55_17025 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QMY55_18990 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QMY55_04325 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D QMY55_05445 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D QMY55_17710 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D QMY55_14215 transcriptional regulator, PaaX family protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D QMY55_16765 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D QMY55_13325 GNAT family N-acetyltransferase K06140 rnk; regulator of nucleoside diphosphate kinase D QMY55_19825 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D QMY55_07940 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D QMY55_12755 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D QMY55_19705 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D QMY55_21995 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D QMY55_16275 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D QMY55_19835 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D QMY55_04380 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D QMY55_20355 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D QMY55_15855 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D QMY55_13825 rtcR; RNA repair transcriptional activator RtcR K14414 rtcR; transcriptional regulatory protein RtcR D QMY55_20335 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:crj03021] D QMY55_11365 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D QMY55_21810 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D QMY55_01705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D QMY55_01710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D QMY55_18435 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D QMY55_06465 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D QMY55_05365 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D QMY55_05890 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D QMY55_06310 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D QMY55_14435 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D QMY55_15400 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D QMY55_21150 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D QMY55_13780 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D QMY55_19510 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D QMY55_23130 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D QMY55_02245 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D QMY55_09780 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D QMY55_16410 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D QMY55_01680 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D QMY55_03910 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D QMY55_03915 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D QMY55_02655 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D QMY55_05370 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA D QMY55_04380 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D QMY55_20355 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D QMY55_15695 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D QMY55_18450 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D QMY55_15545 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:crj03019] D QMY55_05285 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D QMY55_13670 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D QMY55_05395 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D QMY55_15800 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D QMY55_23930 ribonuclease domain-containing protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D QMY55_04980 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D QMY55_08020 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D QMY55_18030 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D QMY55_16655 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D QMY55_00815 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D QMY55_06115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D QMY55_05780 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D QMY55_15545 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D QMY55_05565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D QMY55_03455 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D QMY55_16115 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D QMY55_15650 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D QMY55_17845 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D QMY55_04010 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D QMY55_14970 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D QMY55_04310 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D QMY55_10815 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:crj03011] D QMY55_07540 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D QMY55_15785 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D QMY55_01450 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D QMY55_21815 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D QMY55_21850 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D QMY55_05575 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D QMY55_01400 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D QMY55_21865 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D QMY55_02960 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D QMY55_01415 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D QMY55_21820 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D QMY55_01395 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D QMY55_21825 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D QMY55_21870 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D QMY55_05775 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D QMY55_04935 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D QMY55_01465 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D QMY55_05585 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D QMY55_01440 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D QMY55_17880 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D QMY55_17190 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D QMY55_01690 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D QMY55_01435 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D QMY55_01420 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D QMY55_01425 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D QMY55_21875 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D QMY55_21860 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D QMY55_05590 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D QMY55_01695 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D QMY55_01685 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D QMY55_01700 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D QMY55_02955 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D QMY55_21885 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D QMY55_21840 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D QMY55_01455 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D QMY55_21805 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D QMY55_21855 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D QMY55_04950 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D QMY55_14925 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D QMY55_03990 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D QMY55_01445 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D QMY55_01430 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D QMY55_21880 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D QMY55_03995 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D QMY55_04860 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D QMY55_01460 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D QMY55_21845 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D QMY55_15595 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D QMY55_05325 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D QMY55_04855 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D QMY55_24510 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D QMY55_14930 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D QMY55_21830 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D QMY55_04245 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:crj03009] D QMY55_05395 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D QMY55_04980 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D QMY55_05400 era; GTPase Era K03595 era; GTPase D QMY55_04000 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D QMY55_04380 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D QMY55_20355 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D QMY55_09780 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D QMY55_16410 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D QMY55_01680 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D QMY55_06555 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D QMY55_24040 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D QMY55_01715 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D QMY55_04830 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D QMY55_19425 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D QMY55_24060 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D QMY55_00120 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D QMY55_20330 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D QMY55_05310 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D QMY55_21775 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D QMY55_02935 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D QMY55_13925 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D QMY55_15670 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D QMY55_13680 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D QMY55_14220 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D QMY55_02950 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D QMY55_23110 THUMP domain-containing protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D QMY55_16155 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D QMY55_15075 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D QMY55_11295 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D QMY55_13090 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D QMY55_16165 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D QMY55_05290 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D QMY55_16175 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D QMY55_01150 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D QMY55_20420 S4 domain-containing protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D QMY55_21415 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D QMY55_23470 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D QMY55_04940 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D QMY55_08700 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D QMY55_20165 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D QMY55_12025 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D QMY55_06230 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D QMY55_05285 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D QMY55_13670 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D QMY55_19830 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D QMY55_21300 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D QMY55_04965 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D QMY55_16120 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D QMY55_16365 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D QMY55_16110 hflX; GTPase HflX K03665 hflX; GTPase D QMY55_23420 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D QMY55_18440 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D QMY55_09790 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D QMY55_09775 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D QMY55_13685 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D QMY55_21270 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D QMY55_15675 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein D QMY55_17325 yjgA; ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein D QMY55_23810 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D QMY55_19980 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D QMY55_05320 YceD family protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:crj03016] D QMY55_23930 ribonuclease domain-containing protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D QMY55_21085 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D QMY55_13835 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D QMY55_07375 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D QMY55_04015 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D QMY55_04745 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D QMY55_23365 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D QMY55_18750 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D QMY55_16260 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D QMY55_23155 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D QMY55_05485 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D QMY55_04165 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D QMY55_14030 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D QMY55_14940 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D QMY55_19200 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D QMY55_18545 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D QMY55_06500 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D QMY55_19180 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D QMY55_17655 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D QMY55_16135 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D QMY55_14920 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D QMY55_14915 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D QMY55_03005 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D QMY55_04540 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D QMY55_21315 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D QMY55_03850 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D QMY55_18085 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D QMY55_14015 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D QMY55_11375 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D QMY55_05520 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D QMY55_09795 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D QMY55_10945 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D QMY55_23420 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D QMY55_05945 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D QMY55_24490 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D QMY55_00115 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D QMY55_13315 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D QMY55_08895 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D QMY55_24505 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D QMY55_20225 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1] D QMY55_09480 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D QMY55_08025 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D QMY55_20840 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D QMY55_20835 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D QMY55_14010 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D QMY55_22125 YbaK/EbsC family protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D QMY55_11985 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D QMY55_19920 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D QMY55_05725 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D QMY55_20075 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D QMY55_17360 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D QMY55_04945 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D QMY55_19625 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D QMY55_15710 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D QMY55_16345 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D QMY55_11295 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D QMY55_13090 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D QMY55_23960 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D QMY55_21125 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D QMY55_17665 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D QMY55_10955 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D QMY55_08250 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D QMY55_15265 mnmC; FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D QMY55_21955 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D QMY55_21070 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D QMY55_18830 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D QMY55_18825 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D QMY55_05270 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D QMY55_06045 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D QMY55_13500 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D QMY55_01870 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D QMY55_06515 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D QMY55_23465 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D QMY55_17145 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D QMY55_06040 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D QMY55_08305 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D QMY55_15800 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D QMY55_05780 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:crj03012] D QMY55_09785 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D QMY55_14935 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D QMY55_12055 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D QMY55_15780 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D QMY55_01410 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D QMY55_01665 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D QMY55_01405 fusA; elongation factor G K02355 fusA; elongation factor G D QMY55_09535 fusA; elongation factor G K02355 fusA; elongation factor G D QMY55_13290 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D QMY55_04050 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D QMY55_15770 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D QMY55_04040 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D QMY55_04240 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D QMY55_09275 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D QMY55_14725 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D QMY55_18640 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D QMY55_08705 efp; elongation factor P K02356 efp; elongation factor P D QMY55_14510 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D QMY55_02885 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D QMY55_12865 prfH; peptide chain release factor H K02839 prfH; peptide chain release factor D QMY55_16240 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:crj03110] D QMY55_13205 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D QMY55_05690 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D QMY55_06740 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D QMY55_20340 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D QMY55_21410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D QMY55_05565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D QMY55_10965 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D QMY55_21780 Hsp70 family protein K04046 yegD; hypothetical chaperone protein D QMY55_03455 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D QMY55_05560 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D QMY55_09765 J domain-containing protein K05516 cbpA; curved DNA-binding protein D QMY55_10960 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D QMY55_06100 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D QMY55_05570 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D QMY55_17140 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D QMY55_06570 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D QMY55_03460 groES; co-chaperone GroES K04078 groES; chaperonin GroES D QMY55_05375 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D QMY55_19785 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D QMY55_15665 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D QMY55_01540 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D QMY55_19355 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D QMY55_01785 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D QMY55_22630 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D QMY55_06490 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D QMY55_06485 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D QMY55_08780 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D QMY55_06445 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D QMY55_21705 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D QMY55_18555 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D QMY55_06160 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D QMY55_23800 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D QMY55_14425 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D QMY55_24045 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D QMY55_15490 thioredoxin family protein K03671 TXN; thioredoxin D QMY55_15540 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D QMY55_09770 thioredoxin family protein K03671 TXN; thioredoxin D QMY55_21095 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D QMY55_23395 trxA; thioredoxin K05838 ybbN; putative thioredoxin D QMY55_19360 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D QMY55_04035 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D QMY55_23145 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D QMY55_10480 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D QMY55_20000 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D QMY55_22555 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D QMY55_22765 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D QMY55_22750 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D QMY55_12810 dsbG; thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG D QMY55_22775 dsbG; thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:crj04131] D QMY55_16160 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D QMY55_24095 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D QMY55_23685 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D QMY55_19370 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D QMY55_23650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D QMY55_21410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:crj03051] D QMY55_21410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:crj03032] D QMY55_04030 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D QMY55_15495 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D QMY55_22060 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D QMY55_08745 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D QMY55_22425 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D QMY55_14910 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D QMY55_07535 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D QMY55_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D QMY55_05595 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D QMY55_06470 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D QMY55_12715 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_22050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_24325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_13215 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D QMY55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D QMY55_10695 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D QMY55_23355 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D QMY55_08265 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D QMY55_00355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_02820 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_10975 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_15525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D QMY55_15715 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D QMY55_05085 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D QMY55_12830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D QMY55_17855 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D QMY55_07565 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D QMY55_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D QMY55_06300 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D QMY55_06290 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D QMY55_12710 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D QMY55_22055 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D QMY55_24465 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:crj03036] D QMY55_02270 glycosyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D QMY55_22060 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D QMY55_05395 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D QMY55_03465 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D QMY55_14850 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D QMY55_18015 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D QMY55_08745 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D QMY55_22425 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D QMY55_14910 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D QMY55_07535 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D QMY55_09765 J domain-containing protein K05516 cbpA; curved DNA-binding protein D QMY55_09760 chaperone modulator CbpM K18997 cbpM; chaperone modulatory protein CbpM D QMY55_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D QMY55_21935 Dps family protein K04047 dps; starvation-inducible DNA-binding protein D QMY55_19915 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D QMY55_16115 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D QMY55_00295 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D QMY55_10205 HTH-type transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D QMY55_03035 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_10220 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_10980 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_15110 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_20965 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_24210 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QMY55_12840 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D QMY55_18820 ScpA family protein K05896 scpA; segregation and condensation protein A D QMY55_16170 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D QMY55_20270 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D QMY55_06110 septum formation initiator family protein K05589 ftsB; cell division protein FtsB D QMY55_20320 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D QMY55_04870 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D QMY55_20325 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D QMY55_20275 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D QMY55_20295 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D QMY55_20265 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D QMY55_09960 cell division protein ZapA K09888 zapA; cell division protein ZapA D QMY55_09965 DUF904 domain-containing protein K09892 zapB; cell division protein ZapB D QMY55_03955 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D QMY55_13240 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D QMY55_06035 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D QMY55_01635 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_11775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_14150 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_00380 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D QMY55_00375 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D QMY55_00370 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D QMY55_20690 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D QMY55_01290 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D QMY55_01295 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D QMY55_01300 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D QMY55_20215 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D QMY55_00130 ParA family protein K03496 parA; chromosome partitioning protein D QMY55_16960 parA; ParA family partition ATPase K03496 parA; chromosome partitioning protein D QMY55_19035 parA; ParA family partition ATPase K03496 parA; chromosome partitioning protein D QMY55_24590 parA; ParA family partition ATPase K03496 parA; chromosome partitioning protein D QMY55_00140 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QMY55_17025 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QMY55_18990 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QMY55_06300 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D QMY55_06290 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D QMY55_00115 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D QMY55_00120 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D QMY55_20365 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D QMY55_06065 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D QMY55_18730 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D QMY55_03520 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:crj03400] D QMY55_14190 MGMT family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D QMY55_19840 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D QMY55_21960 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D QMY55_04285 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D QMY55_10050 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D QMY55_11365 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D QMY55_03945 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D QMY55_16285 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D QMY55_09475 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D QMY55_06145 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D QMY55_17995 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D QMY55_00920 alkB; DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D QMY55_06505 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D QMY55_17990 DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D QMY55_19890 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D QMY55_04275 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D QMY55_01190 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D QMY55_16030 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D QMY55_04640 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D QMY55_12830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D QMY55_05085 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D QMY55_02845 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D QMY55_24335 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D QMY55_10935 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D QMY55_08735 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D QMY55_05060 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D QMY55_14845 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D QMY55_01705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D QMY55_01710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D QMY55_21810 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D QMY55_18435 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D QMY55_10280 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D QMY55_17410 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D QMY55_06015 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D QMY55_13820 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D QMY55_10765 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D QMY55_17565 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D QMY55_13215 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D QMY55_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D QMY55_10695 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D QMY55_23355 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D QMY55_08265 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D QMY55_00355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_02820 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_10975 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D QMY55_15525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D QMY55_12715 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_22050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_24325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_01755 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D QMY55_01750 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D QMY55_01760 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D QMY55_24425 recA; recombinase RecA K03553 recA; recombination protein RecA D QMY55_21260 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D QMY55_21245 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D QMY55_20245 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D QMY55_01985 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D QMY55_05580 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D QMY55_20480 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D QMY55_20475 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D QMY55_00555 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D QMY55_21945 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D QMY55_05405 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D QMY55_15515 recR; recombination mediator RecR K06187 recR; recombination protein RecR D QMY55_04315 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D QMY55_00070 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D QMY55_08365 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D QMY55_16025 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1 D QMY55_13705 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D QMY55_07565 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D QMY55_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D QMY55_08745 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D QMY55_22425 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D QMY55_20415 MBL fold metallo-hydrolase K07455 recT; recombination protein RecT D QMY55_19915 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D QMY55_14910 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D QMY55_07535 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D QMY55_00815 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D QMY55_03465 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D QMY55_14850 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D QMY55_18015 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D QMY55_05255 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D QMY55_10725 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D QMY55_08135 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D QMY55_11270 imuA; translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA D QMY55_11275 hypothetical protein K14161 imuB; protein ImuB D QMY55_11280 dnaE; DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D QMY55_24420 recX; recombination regulator RecX K03565 recX; regulatory protein D QMY55_01935 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D QMY55_00055 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D QMY55_13225 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D QMY55_10515 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D QMY55_20140 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D QMY55_20145 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:crj03029] D QMY55_03900 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D QMY55_09785 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D QMY55_14935 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D QMY55_15780 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D QMY55_01410 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D QMY55_01665 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D QMY55_01405 fusA; elongation factor G K02355 fusA; elongation factor G D QMY55_09535 fusA; elongation factor G K02355 fusA; elongation factor G D QMY55_05400 era; GTPase Era K03595 era; GTPase D QMY55_03005 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D QMY55_23365 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D QMY55_04165 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D QMY55_23155 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D QMY55_01280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D QMY55_15790 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D QMY55_16920 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D QMY55_01275 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D QMY55_01285 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D QMY55_06560 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D QMY55_18360 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D QMY55_12715 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_22050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_24325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D QMY55_15745 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D QMY55_05565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D QMY55_05570 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D QMY55_03455 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D QMY55_03460 groES; co-chaperone GroES K04078 groES; chaperonin GroES D QMY55_05560 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D QMY55_10945 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D QMY55_10960 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D QMY55_04035 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D QMY55_18730 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D QMY55_12780 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D QMY55_19565 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D QMY55_19595 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D QMY55_12775 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D QMY55_24495 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D QMY55_13190 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D QMY55_19575 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D QMY55_19560 SCO family protein K07152 SCO1; protein SCO1 D QMY55_22635 SCO family protein K07152 SCO1; protein SCO1 D QMY55_21410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:crj02000] D QMY55_08285 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D QMY55_22930 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D QMY55_20625 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D QMY55_20460 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D QMY55_03305 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D QMY55_14865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D QMY55_20730 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D QMY55_20735 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D QMY55_16830 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D QMY55_16835 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D QMY55_04475 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D QMY55_12250 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D QMY55_05425 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D QMY55_05430 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D QMY55_02500 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D QMY55_10460 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D QMY55_15250 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D QMY55_10465 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D QMY55_10470 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D QMY55_10475 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D QMY55_10870 extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein D QMY55_20050 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D QMY55_23775 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein D QMY55_20055 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D QMY55_20060 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D QMY55_03210 tungsten ABC transporter permease K05772 tupA; tungstate transport system substrate-binding protein D QMY55_15135 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D QMY55_18495 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D QMY55_15125 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein D QMY55_18505 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein D QMY55_15130 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D QMY55_18500 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D QMY55_00730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_14235 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_15230 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_15235 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D QMY55_14225 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D QMY55_15220 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D QMY55_14230 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D QMY55_15215 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D QMY55_02100 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D QMY55_20875 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D QMY55_02105 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D QMY55_20865 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D QMY55_02110 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D QMY55_20870 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D QMY55_07265 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D QMY55_07270 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D QMY55_07275 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D QMY55_07280 proW; glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein D QMY55_07285 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D QMY55_14500 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D QMY55_00840 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D QMY55_14255 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D QMY55_00845 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D QMY55_14260 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D QMY55_23435 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D QMY55_00850 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D QMY55_14265 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D QMY55_23430 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D QMY55_04110 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D QMY55_05150 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D QMY55_04105 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D QMY55_05155 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D QMY55_04100 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D QMY55_05160 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D QMY55_04095 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D QMY55_05145 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D QMY55_00215 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D QMY55_17185 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D QMY55_18120 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D QMY55_18125 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D QMY55_18135 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D QMY55_18130 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D QMY55_18140 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D QMY55_01330 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D QMY55_03730 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D QMY55_08115 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D QMY55_01320 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D QMY55_03725 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D QMY55_08110 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D QMY55_01325 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D QMY55_03720 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D QMY55_01335 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component D QMY55_03740 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D QMY55_03745 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D QMY55_15640 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D QMY55_15635 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein D QMY55_15630 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D QMY55_15625 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D QMY55_14310 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D QMY55_16735 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D QMY55_14320 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D QMY55_16725 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D QMY55_14315 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D QMY55_16730 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D QMY55_20555 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D QMY55_20545 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D QMY55_20550 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D QMY55_20540 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D QMY55_16550 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D QMY55_16545 ABC transporter permease subunit K10006 gluC; glutamate transport system permease protein D QMY55_16540 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein D QMY55_07320 lysine/arginine/ornithine ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D QMY55_07325 transporter substrate-binding domain-containing protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D QMY55_07310 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein D QMY55_07315 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D QMY55_07305 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D QMY55_00445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_01110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_02040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_05910 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_06195 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_06615 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_09505 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_13095 high-affinity branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_14380 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_14385 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17135 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17335 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_17800 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_21445 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_21735 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_22600 transporter substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D QMY55_00440 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_01105 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_02045 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_04895 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_05915 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_06190 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_06630 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_10105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_13100 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D QMY55_14375 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_21435 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D QMY55_00435 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_02050 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_04900 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D QMY55_05920 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_06185 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_06635 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_10110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_13105 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D QMY55_14370 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_21440 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D QMY55_00430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_01100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_04905 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_05900 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_06180 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_06620 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_10115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_13110 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_14365 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_21430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D QMY55_00425 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_01095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_02055 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_04910 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_05905 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_06175 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_06625 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_10120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_13115 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_14360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_21450 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D QMY55_08040 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D QMY55_08045 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D QMY55_10245 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D QMY55_10400 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D QMY55_10390 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D QMY55_10385 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D QMY55_08845 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D QMY55_08850 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D QMY55_08855 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D QMY55_08860 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D QMY55_08865 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D QMY55_11100 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D QMY55_11095 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D QMY55_11090 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D QMY55_03705 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D QMY55_13350 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D QMY55_18910 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D QMY55_23440 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D QMY55_03710 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D QMY55_13345 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D QMY55_18915 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D QMY55_18920 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D QMY55_03715 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D QMY55_13340 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D QMY55_04210 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D QMY55_21190 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D QMY55_04230 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D QMY55_21185 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D QMY55_04225 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D QMY55_21180 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D QMY55_04220 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D QMY55_21175 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D QMY55_04215 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D QMY55_09735 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D QMY55_09740 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D QMY55_09745 ABC transporter permease K13895 yejE; microcin C transport system permease protein D QMY55_09750 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D QMY55_09995 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16] D QMY55_06395 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D QMY55_06400 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D QMY55_06405 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D QMY55_03220 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D QMY55_13560 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D QMY55_03225 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D QMY55_13565 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein D QMY55_03230 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D QMY55_13570 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D QMY55_09985 helical backbone metal receptor K25034 btuF; cobalamin transport system substrate-binding protein D QMY55_09990 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein D QMY55_08840 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein D QMY55_10420 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D QMY55_10425 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D QMY55_10430 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D QMY55_19110 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D QMY55_19115 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D QMY55_19120 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D QMY55_20815 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D QMY55_20810 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D QMY55_10685 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D QMY55_10680 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D QMY55_23135 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D QMY55_04665 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D QMY55_04670 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D QMY55_22735 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D QMY55_22730 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D QMY55_22725 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D QMY55_22720 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D QMY55_03755 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D QMY55_10545 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D QMY55_10550 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D QMY55_15565 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D QMY55_03750 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D QMY55_23400 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D QMY55_00680 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D QMY55_05935 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D QMY55_18605 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D QMY55_00685 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D QMY55_05940 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D QMY55_13935 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D QMY55_14760 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D QMY55_15605 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D QMY55_24610 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D QMY55_24805 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D QMY55_02075 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D QMY55_17890 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D QMY55_03875 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D QMY55_14325 proP; glycine betaine/L-proline transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D QMY55_13880 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D QMY55_10875 aromatic acid/H+ symport family MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D QMY55_20605 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease D QMY55_14290 cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D QMY55_18850 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D QMY55_00980 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D QMY55_00485 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D QMY55_04435 floR; chloramphenicol/florfenicol efflux MFS transporter FloR K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D QMY55_12315 chloramphenicol/florfenicol efflux MFS transporter FloR2 K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D QMY55_04490 tet(A); tetracycline efflux MFS transporter Tet(A) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D QMY55_12330 tet(G); tetracycline efflux MFS transporter Tet(G) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D QMY55_04990 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D QMY55_05960 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D QMY55_07240 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D QMY55_09040 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D QMY55_14160 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D QMY55_17780 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D QMY55_11000 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D QMY55_18260 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D QMY55_13010 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D QMY55_12950 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D QMY55_14155 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D QMY55_02890 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D QMY55_01510 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D QMY55_01505 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D QMY55_01500 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D QMY55_23815 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D QMY55_21910 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z D QMY55_01025 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D QMY55_00020 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_00100 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_01775 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_21075 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_24260 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_10485 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D QMY55_03910 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D QMY55_15060 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D QMY55_03890 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D QMY55_00620 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D QMY55_20990 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel D QMY55_23370 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel D QMY55_00990 AmiS/UreI family transporter K22112 amiS; putative amide transporter protein D QMY55_22615 AmiS/UreI family transporter K22112 amiS; putative amide transporter protein D QMY55_02265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D QMY55_02260 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D QMY55_10760 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D QMY55_15035 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D QMY55_23850 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D QMY55_10755 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D QMY55_15040 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D QMY55_23855 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D QMY55_16430 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D QMY55_16435 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D QMY55_23480 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D QMY55_07140 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D QMY55_04790 bestrophin family protein K08994 yneE; ion channel-forming bestrophin family protein D QMY55_17225 TMEM175 family protein K24915 TMEM175; TMEM175 potassium channel family protein D QMY55_04025 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D QMY55_15270 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D QMY55_18020 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D QMY55_19935 carbohydrate porin K16080 mnoP; high affinity Mn2+ porin D QMY55_07570 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D QMY55_11915 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D QMY55_23455 SGNH/GDSL hydrolase family protein K12686 apeE; outer membrane lipase/esterase D QMY55_15010 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D QMY55_21035 catecholate siderophore receptor Fiu K16090 fiu; catecholate siderophore receptor D QMY55_09970 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D QMY55_13770 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D QMY55_21050 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D QMY55_06380 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D QMY55_19150 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D QMY55_03205 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D QMY55_03285 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D QMY55_10435 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D QMY55_11790 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D QMY55_13540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D QMY55_13555 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D QMY55_08835 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D QMY55_00040 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D QMY55_07440 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D QMY55_13810 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D QMY55_19950 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D QMY55_21645 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D QMY55_19100 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D QMY55_11755 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_20720 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_14870 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D QMY55_22940 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D QMY55_10840 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system D QMY55_09665 efflux transporter outer membrane subunit K08721 oprJ; outer membrane protein, multidrug efflux system D QMY55_01625 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_04405 oprZ; multidrug efflux RND transporter outer membrane subunit OprZ K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_11315 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_14140 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_15745 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D QMY55_16125 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D QMY55_06240 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D QMY55_13220 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D QMY55_23840 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D QMY55_19675 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA D QMY55_19680 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D QMY55_23140 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D QMY55_24115 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D QMY55_24050 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D QMY55_23360 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D QMY55_05020 cellulose synthase subunit BcsC-related outer membrane protein K20543 bcsC; cellulose synthase operon protein C D QMY55_20955 transporter associated domain-containing protein K06189 corC; hemolysin (HlyC) family protein D QMY55_01140 CidA/LrgA family protein K06518 cidA; holin-like protein D QMY55_17690 CidA/LrgA family protein K06518 cidA; holin-like protein D QMY55_05250 amino acid permease K11733 lysP; lysine-specific permease D QMY55_10990 amino acid permease K11733 lysP; lysine-specific permease D QMY55_18690 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP D QMY55_17900 amino acid permease K11735 gabP; GABA permease D QMY55_18475 amino acid permease K11735 gabP; GABA permease D QMY55_05110 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter D QMY55_00045 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D QMY55_07450 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D QMY55_09830 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D QMY55_13805 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D QMY55_19090 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D QMY55_19955 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D QMY55_21635 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D QMY55_10835 efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump D QMY55_09660 efflux RND transporter permease subunit K18296 mexD; multidrug efflux pump D QMY55_06720 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump D QMY55_04410 multidrug efflux RND transporter permease subunit K18095 mexY; multidrug efflux pump D QMY55_01630 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D QMY55_17485 MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump D QMY55_17480 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump D QMY55_16230 SMR family transporter K03297 emrE; small multidrug resistance pump D QMY55_04445 quaternary ammonium compound efflux SMR transporter QacE delta 1 K18975 ebr; small multidrug resistance pump D QMY55_12305 quaternary ammonium compound efflux SMR transporter QacE delta 1 K18975 ebr; small multidrug resistance pump D QMY55_23095 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D QMY55_08950 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein D QMY55_17305 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D QMY55_05195 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter D QMY55_00475 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family D QMY55_10225 EamA family transporter K11939 rhtA; inner membrane transporter RhtA D QMY55_16335 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D QMY55_12845 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D QMY55_16670 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D QMY55_05210 lldP; L-lactate permease K00427 lldP; L-lactate permease D QMY55_05215 L-lactate permease K03303 lutP; lactate permease D QMY55_23925 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D QMY55_02825 cation acetate symporter K14393 actP; cation/acetate symporter D QMY55_06435 VC_2705 family sodium/solute symporter K14393 actP; cation/acetate symporter D QMY55_00635 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D QMY55_23040 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D QMY55_23060 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D QMY55_13930 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D QMY55_00590 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D QMY55_05230 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D QMY55_02740 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D QMY55_19645 kefC; glutathione-regulated potassium-efflux system protein KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC D QMY55_23330 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein D QMY55_23335 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D QMY55_00405 solute carrier family 23 protein K09016 rutG; putative pyrimidine permease RutG D QMY55_15315 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter D QMY55_18265 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter D QMY55_02660 solute carrier family 23 protein K16345 xanP; xanthine permease XanP D QMY55_02675 solute carrier family 23 protein K16345 xanP; xanthine permease XanP D QMY55_02985 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D QMY55_00965 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D QMY55_23315 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D QMY55_10505 chloride channel protein K03281 clcA; chloride channel protein, CIC family D QMY55_05990 chrA; chromate efflux transporter K07240 chrA; chromate transporter D QMY55_10640 chromate transporter K07240 chrA; chromate transporter D QMY55_13905 chromate transporter K07240 chrA; chromate transporter D QMY55_13910 chromate transporter K07240 chrA; chromate transporter D QMY55_13965 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D QMY55_22275 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D QMY55_20570 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D QMY55_03045 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D QMY55_23505 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D QMY55_16795 TRAP transporter large permease subunit K21393 yiaN; TRAP-type transport system large permease protein D QMY55_16790 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein D QMY55_16800 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D QMY55_20575 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein D QMY55_04730 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D QMY55_12935 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D QMY55_22035 arsenic resistance protein K03325 ACR3; arsenite transporter D QMY55_07110 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D QMY55_07115 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D QMY55_07120 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D QMY55_07125 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D QMY55_07130 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D QMY55_17875 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D QMY55_01960 AEC family transporter K13936 mdcF; malonate transporter and related proteins D QMY55_06050 AEC family transporter K13936 mdcF; malonate transporter and related proteins D QMY55_11335 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D QMY55_23320 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D QMY55_10210 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D QMY55_19640 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein D QMY55_11210 LysE family transporter K05835 rhtC; threonine efflux protein D QMY55_17210 LysE family transporter K05835 rhtC; threonine efflux protein D QMY55_00125 LysE family translocator K11250 leuE; leucine efflux protein D QMY55_05095 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D QMY55_10135 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D QMY55_24155 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D QMY55_05100 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D QMY55_10140 AzlD family protein K26606 azlD; branched chain amino acid efflux pump D QMY55_24150 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D QMY55_04705 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D QMY55_06595 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D QMY55_04700 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D QMY55_06590 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D QMY55_06460 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D QMY55_06585 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D QMY55_16575 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter D QMY55_19075 VIT family protein K22736 VIT; vacuolar iron transporter family protein D QMY55_01345 NAAT family transporter K05595 marC; multiple antibiotic resistance protein D QMY55_20295 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D QMY55_24095 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D QMY55_15030 energy transducer TonB K03832 tonB; periplasmic protein TonB D QMY55_18185 hypothetical protein K03832 tonB; periplasmic protein TonB D QMY55_20230 TonB family protein K03832 tonB; periplasmic protein TonB D QMY55_08295 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D QMY55_22920 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein D QMY55_16440 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D QMY55_08290 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D QMY55_11470 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A D QMY55_11480 4Fe-4S dicluster domain-containing protein K08358 ttrB; tetrathionate reductase subunit B D QMY55_11475 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C D QMY55_13005 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D QMY55_20725 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D QMY55_00050 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D QMY55_07445 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D QMY55_09835 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D QMY55_13800 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D QMY55_19085 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D QMY55_19960 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D QMY55_21640 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D QMY55_14860 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D QMY55_22935 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D QMY55_10830 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D QMY55_09655 efflux RND transporter periplasmic adaptor subunit K18295 mexC; membrane fusion protein, multidrug efflux system D QMY55_06715 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D QMY55_04415 MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit K18094 mexX; membrane fusion protein, multidrug efflux system D QMY55_01635 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_11775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_14150 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_17490 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D QMY55_17950 FeoA domain-containing protein K04758 feoA; ferrous iron transport protein A D QMY55_17945 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D QMY55_22745 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D QMY55_21240 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D QMY55_04765 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D QMY55_04770 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D QMY55_18200 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:crj02044] D QMY55_22930 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D QMY55_11755 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_20720 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_20730 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D QMY55_20735 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D QMY55_20725 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D QMY55_14865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D QMY55_14860 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D QMY55_22935 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D QMY55_14870 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D QMY55_22940 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D QMY55_03415 general secretion pathway protein C K02452 gspC; general secretion pathway protein C D QMY55_03370 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D QMY55_03365 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D QMY55_04695 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D QMY55_03335 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D QMY55_03410 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D QMY55_03405 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H D QMY55_03400 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D QMY55_03395 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D QMY55_03390 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D QMY55_03380 gspM; type II secretion system protein GspM K02462 gspM; general secretion pathway protein M D QMY55_03375 gspN; type II secretion system protein N K02463 gspN; general secretion pathway protein N D QMY55_12860 A24 family peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D QMY55_03965 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D QMY55_24315 pilin K02650 pilA; type IV pilus assembly protein PilA D QMY55_03975 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D QMY55_03970 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D QMY55_05740 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D QMY55_16150 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D QMY55_19865 response regulator K02657 pilG; twitching motility two-component system response regulator PilG D QMY55_19860 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D QMY55_19855 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D QMY55_19850 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D QMY55_03565 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D QMY55_03570 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D QMY55_03575 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D QMY55_03580 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D QMY55_03585 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D QMY55_21745 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D QMY55_12015 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D QMY55_21750 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D QMY55_05760 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D QMY55_05755 PilW family protein K02672 pilW; type IV pilus assembly protein PilW D QMY55_05750 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D QMY55_05745 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1 D QMY55_08270 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D QMY55_05765 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D QMY55_05770 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D QMY55_04635 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D QMY55_22950 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D QMY55_04630 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D QMY55_22955 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D QMY55_04625 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D QMY55_22960 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D QMY55_04595 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D QMY55_22965 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D QMY55_04590 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D QMY55_22970 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D QMY55_04585 type II secretion system F family protein K12510 tadB; tight adherence protein B D QMY55_22975 type II secretion system F family protein K12510 tadB; tight adherence protein B D QMY55_04580 type II secretion system F family protein K12511 tadC; tight adherence protein C D QMY55_22980 type II secretion system F family protein K12511 tadC; tight adherence protein C D QMY55_22985 hypothetical protein K27079 tadD; tight adherence protein D D QMY55_23005 pilus assembly protein TadG-related protein K27080 tadG; tight adherence protein G D QMY55_04615 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D QMY55_22945 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D QMY55_05495 YggT family protein K02221 yggT; YggT family protein D QMY55_06345 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D QMY55_02230 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D QMY55_02225 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB D QMY55_02390 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D QMY55_02400 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D QMY55_02405 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D QMY55_02430 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D QMY55_02435 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D QMY55_02440 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D QMY55_02445 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D QMY55_02450 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D QMY55_16905 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D QMY55_19230 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D QMY55_12750 ParA family protein K12055 K12055; chromosome partitioning related protein ParA D QMY55_22000 ParA family protein K12055 K12055; chromosome partitioning related protein ParA D QMY55_12490 mobH; MobH family relaxase K12070 traI; conjugal transfer pilus assembly protein TraI D QMY55_22475 mobH; MobH family relaxase K12070 traI; conjugal transfer pilus assembly protein TraI D QMY55_12595 traD; type IV conjugative transfer system coupling protein TraD K12071 traD; conjugal transfer pilus assembly protein TraD D QMY55_22335 traD; type IV conjugative transfer system coupling protein TraD K12071 traD; conjugal transfer pilus assembly protein TraD D QMY55_20000 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D QMY55_16895 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D QMY55_19240 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D QMY55_16890 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D QMY55_19245 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D QMY55_16885 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD D QMY55_19250 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD D QMY55_16880 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D QMY55_19255 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D QMY55_16865 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D QMY55_19275 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D QMY55_16860 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D QMY55_19280 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D QMY55_16855 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI D QMY55_19285 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI D QMY55_16875 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D QMY55_19260 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D QMY55_16870 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D QMY55_19270 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D QMY55_23455 SGNH/GDSL hydrolase family protein K12686 apeE; outer membrane lipase/esterase D QMY55_03930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D QMY55_19355 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D QMY55_24195 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D QMY55_01675 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D QMY55_24190 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D QMY55_05795 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D QMY55_21835 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D QMY55_20110 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D QMY55_19440 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D QMY55_24200 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D QMY55_24495 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D QMY55_03855 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D QMY55_03860 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D QMY55_03865 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:crj02042] D QMY55_04025 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D QMY55_15270 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D QMY55_18020 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:crj02022] D QMY55_15610 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D QMY55_15615 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D QMY55_10300 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D QMY55_10305 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D QMY55_04300 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D QMY55_04305 winged helix-turn-helix domain-containing protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D QMY55_21660 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D QMY55_21650 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D QMY55_12795 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D QMY55_22565 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D QMY55_12800 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D QMY55_22560 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D QMY55_02920 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D QMY55_02925 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D QMY55_23175 response regulator transcription factor K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D QMY55_06575 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_14245 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_20695 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D QMY55_06580 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D QMY55_20700 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D QMY55_19765 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D QMY55_23625 histidine kinase dimerization/phospho-acceptor domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D QMY55_00035 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D QMY55_09845 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D QMY55_19770 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D QMY55_24435 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D QMY55_23630 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D QMY55_02455 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D QMY55_19390 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D QMY55_05120 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D QMY55_05115 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D QMY55_16045 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D QMY55_16040 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D QMY55_01725 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D QMY55_01730 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D QMY55_20125 histidine kinase dimerization/phospho-acceptor domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D QMY55_20130 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D QMY55_02475 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D QMY55_02255 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D QMY55_02470 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D QMY55_02495 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D QMY55_19865 response regulator K02657 pilG; twitching motility two-component system response regulator PilG D QMY55_19860 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D QMY55_24240 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D QMY55_24235 LuxR C-terminal-related transcriptional regulator K11712 dctR; two-component system, LuxR family, response regulator DctR D QMY55_11115 ATP-binding protein K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D QMY55_11120 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR D QMY55_13195 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D QMY55_13200 response regulator transcription factor K15012 regA; two-component system, response regulator RegA C 02035 Bacterial motility proteins [BR:crj02035] D QMY55_02475 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D QMY55_02480 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D QMY55_02490 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D QMY55_02485 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D QMY55_02495 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D QMY55_02255 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D QMY55_02470 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D QMY55_02250 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D QMY55_04570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_04675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_10575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_13710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_14505 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_16195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_16380 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_17415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_00090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D QMY55_15450 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D QMY55_16465 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D QMY55_04575 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D QMY55_05260 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D QMY55_11685 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D QMY55_02400 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D QMY55_02405 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D QMY55_02410 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D QMY55_02435 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D QMY55_02440 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D QMY55_02445 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D QMY55_02450 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D QMY55_02230 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D QMY55_02225 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB D QMY55_02395 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D QMY55_02425 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D QMY55_02430 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D QMY55_02390 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D QMY55_02200 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D QMY55_02160 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D QMY55_02195 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D QMY55_02420 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D QMY55_02385 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D QMY55_02165 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D QMY55_02170 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D QMY55_02175 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD D QMY55_02185 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D QMY55_02190 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D QMY55_02205 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D QMY55_02180 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D QMY55_02210 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D QMY55_02215 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D QMY55_02355 flagellin K02406 fliC; flagellin D QMY55_02360 flagellin K02406 fliC; flagellin D QMY55_02365 flagellin K02406 fliC; flagellin D QMY55_02370 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D QMY55_02375 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D QMY55_02380 flagellar protein FliT K02423 fliT; flagellar protein FliT D QMY55_17585 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D QMY55_17590 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D QMY55_02245 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D QMY55_02265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D QMY55_02260 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D QMY55_02155 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D QMY55_02235 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D QMY55_13975 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D QMY55_19865 response regulator K02657 pilG; twitching motility two-component system response regulator PilG D QMY55_19860 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D QMY55_19855 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D QMY55_19850 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D QMY55_20130 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D QMY55_20125 histidine kinase dimerization/phospho-acceptor domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D QMY55_21745 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D QMY55_12015 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D QMY55_21750 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D QMY55_24315 pilin K02650 pilA; type IV pilus assembly protein PilA D QMY55_03975 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D QMY55_03970 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D QMY55_03965 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D QMY55_16150 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D QMY55_03585 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D QMY55_03580 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D QMY55_03575 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D QMY55_03570 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D QMY55_03565 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D QMY55_08270 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D QMY55_05760 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D QMY55_05755 PilW family protein K02672 pilW; type IV pilus assembly protein PilW D QMY55_05750 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D QMY55_05745 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1 D QMY55_05740 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D QMY55_04615 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D QMY55_22945 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D QMY55_04635 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D QMY55_22950 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D QMY55_04630 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D QMY55_22955 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D QMY55_04625 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D QMY55_22960 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D QMY55_04595 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D QMY55_22965 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D QMY55_04590 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D QMY55_22970 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:crj04812] D QMY55_01290 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D QMY55_20265 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D QMY55_20270 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D QMY55_00380 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D QMY55_00375 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D QMY55_00370 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D QMY55_00130 ParA family protein K03496 parA; chromosome partitioning protein D QMY55_16960 parA; ParA family partition ATPase K03496 parA; chromosome partitioning protein D QMY55_19035 parA; ParA family partition ATPase K03496 parA; chromosome partitioning protein D QMY55_24590 parA; ParA family partition ATPase K03496 parA; chromosome partitioning protein D QMY55_00140 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QMY55_17025 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QMY55_18990 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:crj04147] D QMY55_21410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D QMY55_06115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D QMY55_23685 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D QMY55_24145 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D QMY55_23650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D QMY55_06490 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D QMY55_03455 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D QMY55_05565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D QMY55_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D QMY55_14065 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D QMY55_01410 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D QMY55_01665 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D QMY55_03850 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D QMY55_18085 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D QMY55_14760 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D QMY55_09455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_10415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_11960 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21000 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21425 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_21725 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_23610 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D QMY55_00075 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_06865 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_09120 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10410 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_10600 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_12065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_14800 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D QMY55_02930 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D QMY55_10735 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D QMY55_24130 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D QMY55_05130 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D QMY55_07330 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D QMY55_13890 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D QMY55_18670 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D QMY55_14525 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D QMY55_21905 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D QMY55_16055 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D QMY55_01365 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D QMY55_18680 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D QMY55_20970 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D QMY55_04970 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D QMY55_03615 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_03620 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_01230 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_09245 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_10705 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D QMY55_19910 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D QMY55_04975 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D QMY55_11555 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_13245 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_22790 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D QMY55_14775 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D QMY55_17090 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D QMY55_00565 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D QMY55_05790 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D QMY55_19370 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D QMY55_09175 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:crj02048] D QMY55_16025 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1 D QMY55_16020 cas3f; type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D QMY55_16015 csy1; type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1 D QMY55_16010 csy2; type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2 D QMY55_16005 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D QMY55_16000 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D QMY55_07880 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D QMY55_07970 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D QMY55_11150 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D QMY55_07885 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D QMY55_07985 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D QMY55_17050 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D QMY55_07890 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D QMY55_07895 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D QMY55_07980 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D QMY55_11160 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D QMY55_17055 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D QMY55_08350 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D QMY55_22060 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D QMY55_07875 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D QMY55_07870 mcrC; 5-methylcytosine-specific restriction endonuclease system specificity protein McrC K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D QMY55_12500 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] D QMY55_22465 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] D QMY55_12495 type II toxin-antitoxin system PrlF family antitoxin K19156 prlF; antitoxin PrlF D QMY55_22470 type II toxin-antitoxin system PrlF family antitoxin K19156 prlF; antitoxin PrlF D QMY55_24580 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D QMY55_24575 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D QMY55_11580 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D QMY55_13865 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D QMY55_11575 helix-turn-helix transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D QMY55_24705 type II toxin-antitoxin system MqsA family antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D QMY55_20265 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D QMY55_01290 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D QMY55_06300 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D QMY55_06290 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D QMY55_07375 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D QMY55_16640 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D QMY55_10945 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:crj01504] D QMY55_12290 OXA-5 family class D beta-lactamase OXA-129 K18792 blaOXA-10; beta-lactamase class D OXA-10 [EC:3.5.2.6] D QMY55_04450 aminoglycoside N-acetyltransferase AAC(6')-Ib4 K19278 aac6-Ib; aminoglycoside 6'-N-acetyltransferase Ib [EC:2.3.1.82] D QMY55_12280 aac(6')-Ib; AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase K19278 aac6-Ib; aminoglycoside 6'-N-acetyltransferase Ib [EC:2.3.1.82] D QMY55_12300 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47] D QMY55_04490 tet(A); tetracycline efflux MFS transporter Tet(A) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D QMY55_12330 tet(G); tetracycline efflux MFS transporter Tet(G) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D QMY55_04475 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D QMY55_12250 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D QMY55_04470 Mph(E) family macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase D QMY55_12255 Mph(E) family macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase D QMY55_04435 floR; chloramphenicol/florfenicol efflux MFS transporter FloR K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D QMY55_12315 chloramphenicol/florfenicol efflux MFS transporter FloR2 K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D QMY55_12295 type B-3 chloramphenicol O-acetyltransferase CatB3 K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D QMY55_04440 folP; dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D QMY55_12310 folP; dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D QMY55_12390 sul1; sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D QMY55_12275 dfrA16; trimethoprim-resistant dihydrofolate reductase DfrA16 K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3] D QMY55_12950 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D QMY55_23100 fos; fosfomycin resistance glutathione transferase K21265 fosA5; glutathione S-transferase fosA5 [EC:2.5.1.18] D QMY55_10500 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D QMY55_21660 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D QMY55_21650 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D QMY55_19925 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D QMY55_01635 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_11775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_14150 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D QMY55_01630 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D QMY55_01625 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_04405 oprZ; multidrug efflux RND transporter outer membrane subunit OprZ K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_11315 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_14140 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D QMY55_09650 TetR/AcrR family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D QMY55_09655 efflux RND transporter periplasmic adaptor subunit K18295 mexC; membrane fusion protein, multidrug efflux system D QMY55_09660 efflux RND transporter permease subunit K18296 mexD; multidrug efflux pump D QMY55_06715 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D QMY55_06720 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump D QMY55_04415 MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit K18094 mexX; membrane fusion protein, multidrug efflux system D QMY55_04410 multidrug efflux RND transporter permease subunit K18095 mexY; multidrug efflux pump D QMY55_00080 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D QMY55_18165 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D QMY55_11755 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_20720 TolC family outer membrane protein K12340 tolC; outer membrane protein D QMY55_10830 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D QMY55_10835 efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump D QMY55_10840 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:crj00537] D QMY55_03615 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D QMY55_03620 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:crj03100] D QMY55_07380 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D QMY55_07405 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D QMY55_07420 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D QMY55_07460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D QMY55_04515 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D QMY55_19690 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D QMY55_20750 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D QMY55_13355 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D QMY55_18330 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D QMY55_17680 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D QMY55_05800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D QMY55_15805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D QMY55_01735 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D QMY55_01740 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D QMY55_18540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D QMY55_13295 tRNA-Sec K14238 tRNA-Sec; tRNA Sec # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D QMY55_13120 SDR family NAD(P)-dependent oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320] D QMY55_11005 dkgB; 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D QMY55_06895 3-alpha-hydroxysteroid 3-dehydrogenase K19811 hsdA; 3alpha-hydroxysteroid 3-dehydrogenase [EC:1.1.1.357] D QMY55_11030 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D QMY55_11035 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D QMY55_24340 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D QMY55_01000 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1] D QMY55_05705 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D QMY55_17525 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D QMY55_17515 xanthine dehydrogenase family protein subunit M K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D QMY55_17520 xanthine dehydrogenase family protein molybdopterin-binding subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D QMY55_24205 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D QMY55_14175 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D QMY55_08975 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D QMY55_19475 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D QMY55_08980 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D QMY55_19470 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D QMY55_06940 acyl-CoA dehydrogenase family protein K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-] D QMY55_06925 acyl-CoA dehydrogenase family protein K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-] D QMY55_11105 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D QMY55_09170 NAD(P)-binding protein K18208 RNLS; renalase [EC:1.6.3.5] D QMY55_14005 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D QMY55_05785 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D QMY55_09105 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D QMY55_10580 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D QMY55_16200 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D QMY55_16650 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D QMY55_21500 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D QMY55_10445 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D QMY55_13645 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D QMY55_06370 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D QMY55_12785 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D QMY55_22305 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D QMY55_22700 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D QMY55_11780 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D QMY55_14410 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D QMY55_23790 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D QMY55_03540 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D QMY55_19080 cytochrome b K12262 cybB; superoxide oxidase [EC:1.10.3.17] D QMY55_05610 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D QMY55_21250 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D QMY55_06365 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D QMY55_21360 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D QMY55_22650 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D QMY55_10655 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D QMY55_13995 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D QMY55_17255 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D QMY55_23710 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D QMY55_23795 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D QMY55_23905 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D QMY55_15015 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D QMY55_21040 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D QMY55_21695 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D QMY55_08080 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3] D QMY55_06695 hpnE; hydroxysqualene dehydroxylase HpnE K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D QMY55_01115 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D QMY55_19790 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D QMY55_12930 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D QMY55_11765 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D QMY55_16185 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D QMY55_00735 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D QMY55_09200 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D QMY55_17385 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D QMY55_21470 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D QMY55_16605 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D QMY55_20950 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D QMY55_17295 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D QMY55_19000 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D QMY55_08810 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D QMY55_11385 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D QMY55_15350 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D QMY55_17120 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D QMY55_15355 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D QMY55_18855 tRNA-uridine aminocarboxypropyltransferase K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D QMY55_23745 tRNA-uridine aminocarboxypropyltransferase K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D QMY55_09860 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D QMY55_14990 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D QMY55_06420 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D QMY55_24255 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D QMY55_19760 sensor domain-containing diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D QMY55_14405 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D QMY55_04045 PEP/pyruvate-binding domain-containing protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D QMY55_02605 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D QMY55_23820 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D QMY55_23045 PAS-domain containing protein K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3] D QMY55_00830 CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D QMY55_08720 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D QMY55_00700 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D QMY55_07490 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D QMY55_11110 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D QMY55_16425 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D QMY55_24470 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D QMY55_04565 3',5'-nucleoside bisphosphate phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D QMY55_21950 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D QMY55_09810 alkyl sulfatase dimerization domain-containing protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D QMY55_04680 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D QMY55_08275 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D QMY55_11070 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D QMY55_05025 bcsZ; cellulose synthase complex periplasmic endoglucanase BcsZ K20542 bcsZ; endoglucanase [EC:3.2.1.4] D QMY55_07855 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D QMY55_15320 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D QMY55_24170 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D QMY55_24245 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D QMY55_19800 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D QMY55_05315 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D QMY55_17110 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D QMY55_00135 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D QMY55_10455 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D QMY55_10585 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D QMY55_06935 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-] D QMY55_18160 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D QMY55_15795 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D QMY55_06920 Zn-ribbon domain-containing OB-fold protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-] D QMY55_06930 MaoC family dehydratase K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-] D QMY55_13720 threo-3-hydroxy-L-aspartate ammonia-lyase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D QMY55_20405 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D QMY55_03295 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D QMY55_03300 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D QMY55_20190 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D QMY55_09720 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D QMY55_13845 rtcA; RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D QMY55_11995 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D QMY55_09885 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D QMY55_22705 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D QMY55_08100 cation-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D QMY55_22500 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D QMY55_20065 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D QMY55_10970 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D QMY55_15305 ferredoxin family protein K05524 fdxA; ferredoxin D QMY55_22030 ferredoxin family protein K05524 fdxA; ferredoxin D QMY55_10950 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D QMY55_23980 tcuB; tricarballylate utilization 4Fe-4S protein TcuB K13795 citB; citrate/tricarballylate utilization protein D QMY55_23975 tcuA; FAD-dependent tricarballylate dehydrogenase TcuA K13796 cobZ; tricarballylate dehydrogenase D QMY55_22605 VWA domain-containing protein K02448 norD; nitric oxide reductase NorD protein D QMY55_22610 CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein D QMY55_14780 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D QMY55_17095 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D QMY55_18460 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D QMY55_17650 VOC family protein K08234 yaeR; glyoxylase I family protein D QMY55_00970 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D QMY55_21740 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D QMY55_19665 GNAT family protein K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D QMY55_07530 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A D QMY55_07525 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B D QMY55_00520 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein D QMY55_05030 bcsB; cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D QMY55_13580 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D QMY55_17615 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein D QMY55_04145 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D QMY55_04140 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D QMY55_05640 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D QMY55_13595 VWA domain-containing protein K13580 K13580; magnesium chelatase subunit ChlD-like protein C 99988 Secondary metabolism D QMY55_00110 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D QMY55_10265 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D QMY55_13990 DoxX family protein K15977 K15977; putative oxidoreductase D QMY55_18195 DoxX family protein K15977 K15977; putative oxidoreductase D QMY55_16235 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D QMY55_01030 glnK; P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D QMY55_08200 Tex family protein K06959 tex; protein Tex C 99974 Translation D QMY55_15560 rbbA; ribosome-associated ATPase/putative transporter RbbA K13926 rbbA; ribosome-dependent ATPase D QMY55_10845 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D QMY55_13210 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D QMY55_06730 tig; trigger factor K03545 tig; trigger factor D QMY55_03545 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D QMY55_13280 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D QMY55_08800 urease accessory UreF family protein K03188 ureF; urease accessory protein D QMY55_08795 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D QMY55_08870 urease accessory protein UreD K03190 ureD; urease accessory protein D QMY55_08825 HupE/UreJ family protein K03192 ureJ; urease accessory protein D QMY55_14045 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D QMY55_01065 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D QMY55_17425 proteasome-type protease K07395 K07395; putative proteasome-type protease D QMY55_12145 DsbA family protein K07396 K07396; putative protein-disulfide isomerase D QMY55_13515 DsbA family protein K07396 K07396; putative protein-disulfide isomerase D QMY55_03435 OsmC family protein K07397 yhfA; putative redox protein D QMY55_23700 OsmC family protein K07397 yhfA; putative redox protein D QMY55_03530 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D QMY55_18180 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D QMY55_18350 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D QMY55_12535 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D QMY55_18560 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D QMY55_22415 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D QMY55_07515 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D QMY55_21770 YraN family protein K07460 yraN; putative endonuclease D QMY55_24180 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D QMY55_08530 terminase small subunit K07474 xtmA; phage terminase small subunit D QMY55_04885 replication-associated recombination protein A K07478 ycaJ; putative ATPase D QMY55_07685 AAA family ATPase K06919 K06919; putative DNA primase/helicase D QMY55_19695 DUF927 domain-containing protein K06919 K06919; putative DNA primase/helicase D QMY55_09225 IS5 family transposase K07481 K07481; transposase, IS5 family D QMY55_11465 IS5 family transposase K07481 K07481; transposase, IS5 family D QMY55_15045 IS5 family transposase K07481 K07481; transposase, IS5 family D QMY55_18625 IS5 family transposase K07481 K07481; transposase, IS5 family D QMY55_23865 IS5 family transposase K07481 K07481; transposase, IS5 family D QMY55_04390 IS6-like element IS6100 family transposase K18320 IS15; transposase, IS6 family D QMY55_04465 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family D QMY55_04480 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family D QMY55_12245 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family D QMY55_12265 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family D QMY55_12400 IS6-like element IS6100 family transposase K18320 IS15; transposase, IS6 family D QMY55_00760 IS1595 family transposase K07488 K07488; transposase D QMY55_03650 transposase K07491 rayT; REP-associated tyrosine transposase D QMY55_04370 IS256 family transposase K07493 K07493; putative transposase D QMY55_09155 transposase K07497 K07497; putative transposase D QMY55_11830 IS3 family transposase K07497 K07497; putative transposase D QMY55_12230 IS3 family transposase K07497 K07497; putative transposase D QMY55_15940 IS3 family transposase K07497 K07497; putative transposase D QMY55_19495 IS3 family transposase K07497 K07497; putative transposase D QMY55_21165 IS3 family transposase K07497 K07497; putative transposase D QMY55_12180 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D QMY55_15520 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D QMY55_09190 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D QMY55_17975 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D QMY55_05240 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D QMY55_19895 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D QMY55_11770 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D QMY55_14145 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D QMY55_04920 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D QMY55_03235 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D QMY55_04150 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D QMY55_13505 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D QMY55_04880 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D QMY55_17280 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D QMY55_00870 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D QMY55_13600 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D QMY55_21790 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth D QMY55_14415 septation protein A K06190 ispZ; intracellular septation protein D QMY55_02680 STAS domain-containing protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D QMY55_07605 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D QMY55_10240 SpoVR family protein K06415 spoVR; stage V sporulation protein R C 99993 Cell motility C 99995 Signaling proteins D QMY55_09800 typA; translational GTPase TypA K06207 typA; GTP-binding protein D QMY55_01215 HPP family protein K07168 K07168; CBS domain-containing membrane protein D QMY55_21265 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D QMY55_05605 PhoH family protein K07175 phoH2; PhoH-like ATPase D QMY55_10230 PrkA family serine protein kinase K07180 prkA; serine protein kinase D QMY55_02815 putative nucleotidyltransferase substrate binding domain-containing protein K07182 K07182; CBS domain-containing protein D QMY55_09610 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D QMY55_04875 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D QMY55_04265 lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB D QMY55_03735 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D QMY55_15740 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D QMY55_16180 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD D QMY55_09340 OmpW family outer membrane protein K07275 ompW; outer membrane protein D QMY55_23450 OmpW family outer membrane protein K07275 ompW; outer membrane protein D QMY55_11285 AsmA family protein K07290 yhjG; AsmA family protein D QMY55_10540 efflux RND transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D QMY55_15555 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D QMY55_06020 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D QMY55_04295 creD; cell envelope integrity protein CreD K06143 creD; inner membrane protein D QMY55_22740 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D QMY55_22755 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D QMY55_22760 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D QMY55_16145 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D QMY55_15620 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D QMY55_15025 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D QMY55_19445 cutA; divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D QMY55_22870 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D QMY55_03555 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D QMY55_06390 ChuX/HutX family heme-like substrate-binding protein K07225 hmuS; putative hemin transport protein D QMY55_18365 DsrE family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur D QMY55_22110 DsrE family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D QMY55_07360 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D QMY55_13960 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein D QMY55_19410 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein D QMY55_23115 tRNA-binding protein K06878 K06878; tRNA-binding protein D QMY55_18590 group II truncated hemoglobin K06886 glbN; hemoglobin D QMY55_03845 patatin-like phospholipase family protein K07001 K07001; NTE family protein D QMY55_09005 patatin-like phospholipase family protein K07001 K07001; NTE family protein D QMY55_12825 patatin-like phospholipase family protein K07001 K07001; NTE family protein D QMY55_14335 patatin-like phospholipase family protein K07001 K07001; NTE family protein D QMY55_18740 patatin-like phospholipase family protein K07001 K07001; NTE family protein D QMY55_02965 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D QMY55_01125 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D QMY55_15915 YihY family inner membrane protein K07058 K07058; membrane protein D QMY55_13980 sulfurtransferase K07146 K07146; UPF0176 protein D QMY55_05930 VOC family protein K04750 phnB; PhnB protein D QMY55_15055 heme-binding protein K11477 glcG; glc operon protein GlcG D QMY55_12940 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D QMY55_01600 LemA family protein K03744 lemA; LemA protein D QMY55_18580 LemA family protein K03744 lemA; LemA protein D QMY55_10070 SlyX family protein K03745 slyX; SlyX protein D QMY55_03275 CreA family protein K05805 creA; CreA protein D QMY55_07355 SPOR domain-containing protein K03749 dedD; DedD protein D QMY55_06025 DedA family protein K03975 dedA; membrane-associated protein D QMY55_24290 phage holin family protein K08972 K08972; putative membrane protein D QMY55_23160 DUF2214 family protein K08983 K08983; putative membrane protein D QMY55_02715 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein D QMY55_11595 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA C 99997 Function unknown D QMY55_08060 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D QMY55_08280 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D QMY55_13610 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D QMY55_13020 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein D QMY55_01595 TPM domain-containing protein K06872 K06872; uncharacterized protein D QMY55_01265 alpha/beta hydrolase K06889 K06889; uncharacterized protein D QMY55_05965 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein D QMY55_12155 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein D QMY55_03940 ATP-binding protein K06923 K06923; uncharacterized protein D QMY55_02805 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D QMY55_24275 DUF3717 domain-containing protein K06938 K06938; uncharacterized protein D QMY55_00025 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D QMY55_17935 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D QMY55_17955 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D QMY55_01945 GTPase K06945 K06945; uncharacterized protein D QMY55_20120 PP0621 family protein K06950 K06950; uncharacterized protein D QMY55_09210 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D QMY55_08965 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein D QMY55_01770 VOC family protein K06991 K06991; uncharacterized protein D QMY55_20220 YqiA/YcfP family alpha/beta fold hydrolase K07000 K07000; uncharacterized protein D QMY55_06990 efflux RND transporter permease subunit K07003 K07003; uncharacterized protein D QMY55_02620 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D QMY55_01385 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein D QMY55_01610 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein D QMY55_23025 UPF0149 family protein K07039 K07039; uncharacterized protein D QMY55_06610 amidohydrolase family protein K07045 K07045; uncharacterized protein D QMY55_18035 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D QMY55_16485 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D QMY55_13840 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein D QMY55_01310 TSUP family transporter K07090 K07090; uncharacterized protein D QMY55_01975 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_14745 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_15275 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_16455 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_18610 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_21295 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_22510 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_22785 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_23665 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D QMY55_05065 DUF839 domain-containing protein K07093 K07093; uncharacterized protein D QMY55_16350 DHHA1 domain-containing protein K07097 K07097; uncharacterized protein D QMY55_10810 metallophosphoesterase K07098 K07098; uncharacterized protein D QMY55_16080 phosphoribosyltransferase family protein K07101 K07101; uncharacterized protein D QMY55_06660 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein D QMY55_10360 hypothetical protein K07112 K07112; uncharacterized protein D QMY55_10365 YeeE/YedE family protein K07112 K07112; uncharacterized protein D QMY55_18375 yedE; selenium metabolism membrane protein YedE/FdhT K07112 K07112; uncharacterized protein D QMY55_18770 YeeE/YedE family protein K07112 K07112; uncharacterized protein D QMY55_24460 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein D QMY55_17790 NAD(P)H-binding protein K07118 K07118; uncharacterized protein D QMY55_21580 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D QMY55_09030 SDR family oxidoreductase K07124 K07124; uncharacterized protein D QMY55_04080 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein D QMY55_05225 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein D QMY55_05555 sel1 repeat family protein K07126 K07126; uncharacterized protein D QMY55_09640 SEL1-like repeat protein K07126 K07126; uncharacterized protein D QMY55_20485 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D QMY55_19990 MOSC N-terminal beta barrel domain-containing protein K07140 K07140; MOSC domain-containing protein D QMY55_05490 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D QMY55_17505 VWA domain-containing protein K07161 K07161; uncharacterized protein D QMY55_19185 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D QMY55_22220 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D QMY55_24500 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D QMY55_12815 hypothetical protein K09004 K09004; uncharacterized protein D QMY55_13530 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D QMY55_17195 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D QMY55_19485 DUF711 family protein K09157 K09157; uncharacterized protein D QMY55_01530 DUF493 family protein K09158 K09158; uncharacterized protein D QMY55_17500 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein D QMY55_09205 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D QMY55_14135 DUF333 domain-containing protein K09712 K09712; uncharacterized protein D QMY55_09335 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D QMY55_10235 YeaH/YhbH family protein K09786 K09786; uncharacterized protein D QMY55_08185 YbaN family protein K09790 K09790; uncharacterized protein D QMY55_10745 Trm112 family protein K09791 K09791; uncharacterized protein D QMY55_09940 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D QMY55_14055 RnfH family protein K09801 K09801; uncharacterized protein D QMY55_05280 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D QMY55_03950 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D QMY55_04810 YceH family protein K09915 K09915; uncharacterized protein D QMY55_15440 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D QMY55_20370 DUF484 family protein K09921 K09921; uncharacterized protein D QMY55_18660 CbrC family protein K09925 K09925; uncharacterized protein D QMY55_09920 FixH family protein K09926 K09926; uncharacterized protein D QMY55_16095 DUF2065 family protein K09937 K09937; uncharacterized protein D QMY55_15005 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein D QMY55_03605 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D QMY55_01745 hypothetical protein K09943 K09943; uncharacterized protein D QMY55_06165 DUF2076 family protein K09945 K09945; uncharacterized protein D QMY55_10250 DUF3820 family protein K09954 K09954; uncharacterized protein D QMY55_21550 TraB/GumN family protein K09973 K09973; uncharacterized protein D QMY55_00880 HutD family protein K09975 K09975; uncharacterized protein D QMY55_00595 YjfI family protein K09980 K09980; uncharacterized protein D QMY55_19670 VWA domain-containing protein K09989 K09989; uncharacterized protein D QMY55_22580 metal-sensing transcriptional repressor K07807 K07807; uncharacterized protein D QMY55_04915 DUF47 domain-containing protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 3, 2024