+D GENES KO
#
KEGG Orthology (KO) - Cylindrospermopsis raciborskii
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:crk00010]
D L3I90_15380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D L3I90_02345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_07560 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_04030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D L3I90_15330 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D L3I90_15360 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D L3I90_16590 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D L3I90_11745 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D L3I90_07330 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D L3I90_07255 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D L3I90_07905 type I glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D L3I90_06805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D L3I90_02700 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D L3I90_04650 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D L3I90_07250 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_07540 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_10565 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_00555 glycerol-3-phosphate acyltransferase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_04470 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_15340 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_15375 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D L3I90_15420 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D L3I90_12765 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_06685 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_15320 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_15265 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D L3I90_10580 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00020 Citrate cycle (TCA cycle) [PATH:crk00020]
D L3I90_01630 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D L3I90_07600 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D L3I90_09020 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_13040 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D L3I90_13045 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D L3I90_14480 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D L3I90_05875 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D L3I90_09405 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D L3I90_10440 aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D L3I90_15375 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D L3I90_15420 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D L3I90_12765 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D L3I90_06685 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_15320 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:crk00030]
D L3I90_04030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D L3I90_15355 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D L3I90_13975 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D L3I90_13520 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D L3I90_09035 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D L3I90_09420 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D L3I90_05420 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D L3I90_07245 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D L3I90_09195 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D L3I90_02730 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D L3I90_13945 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D L3I90_04750 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D L3I90_09975 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D L3I90_11745 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D L3I90_15360 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D L3I90_16590 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D L3I90_15330 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:crk00040]
D L3I90_02975 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D L3I90_09035 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D L3I90_00540 zinc-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D L3I90_13610 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D L3I90_10350 FGGY-family carbohydrate kinase K22935 XK1; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:crk00051]
D L3I90_02835 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D L3I90_16425 cupin domain-containing protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D L3I90_13385 mannose-1-phosphate guanyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D L3I90_11140 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D L3I90_03515 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D L3I90_08980 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D L3I90_08985 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D L3I90_15330 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D L3I90_15360 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D L3I90_16590 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D L3I90_00540 zinc-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D L3I90_13610 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D L3I90_11745 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D L3I90_07330 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:crk00052]
D L3I90_02410 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_05405 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_05460 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_15380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D L3I90_02345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_07560 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_09510 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D L3I90_15330 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:crk00053]
D L3I90_02975 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D L3I90_02860 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:crk00500]
D L3I90_06455 sucrose-phosphate phosphatase K07024 SPP; sucrose-6-phosphatase [EC:3.1.3.24]
D L3I90_11895 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D L3I90_04290 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D L3I90_09345 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D L3I90_11240 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D L3I90_12330 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D L3I90_06590 glycoside hydrolase family 57 protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D L3I90_07340 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D L3I90_04305 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D L3I90_01060 glycoside hydrolase family 15 protein K01178 SGA1; glucoamylase [EC:3.2.1.3]
D L3I90_08000 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D L3I90_15380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D L3I90_02345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_07560 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_04030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D L3I90_02835 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:crk00520]
D L3I90_06370 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D L3I90_09320 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D L3I90_02835 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D L3I90_12845 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D L3I90_09390 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D L3I90_10715 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D L3I90_12870 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D L3I90_10840 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D L3I90_06580 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D L3I90_07895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D L3I90_01140 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D L3I90_15035 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D L3I90_05105 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D L3I90_02980 SDR family oxidoreductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D L3I90_15380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D L3I90_02345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_07560 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_02975 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D L3I90_13280 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D L3I90_02410 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_05405 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_05460 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_09510 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D L3I90_02860 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D L3I90_04030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D L3I90_16425 cupin domain-containing protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D L3I90_13385 mannose-1-phosphate guanyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D L3I90_03515 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D L3I90_11140 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D L3I90_08980 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D L3I90_08985 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D L3I90_11895 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D L3I90_05470 NAD-dependent epimerase/dehydratase family protein K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D L3I90_08715 NAD-dependent epimerase/dehydratase family protein K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D L3I90_04290 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:crk00620]
D L3I90_10580 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D L3I90_06685 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_15320 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_15375 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D L3I90_15420 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D L3I90_12765 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_15270 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D L3I90_15265 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D L3I90_07250 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_07540 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_10565 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_01355 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D L3I90_13845 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D L3I90_05845 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D L3I90_02895 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D L3I90_00815 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D L3I90_04645 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D L3I90_01855 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D L3I90_09115 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D L3I90_10440 aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D L3I90_11945 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D L3I90_00555 glycerol-3-phosphate acyltransferase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_04470 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_15340 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_00545 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D L3I90_08060 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:crk00630]
D L3I90_10580 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D L3I90_01630 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D L3I90_07600 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D L3I90_14485 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D L3I90_12505 FAD-binding oxidoreductase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D L3I90_12510 4Fe-4S dicluster domain-containing protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D L3I90_06925 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D L3I90_14575 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D L3I90_07745 form I ribulose bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D L3I90_07735 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D L3I90_16415 glutamate synthase-related protein K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D L3I90_10705 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D L3I90_06395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D L3I90_15650 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D L3I90_16780 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_16785 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D L3I90_14280 glycerate kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D L3I90_09975 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:crk00640]
D L3I90_10580 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_15270 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D L3I90_01355 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D L3I90_13845 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D L3I90_05845 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D L3I90_02895 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D L3I90_13045 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D L3I90_13040 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D L3I90_07600 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:crk00650]
D L3I90_15265 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D L3I90_14480 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D L3I90_05875 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D L3I90_09405 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D L3I90_12900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D L3I90_15270 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D L3I90_06685 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_15320 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_03975 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D L3I90_12895 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D L3I90_00170 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:crk00660]
D L3I90_03975 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D L3I90_12895 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D L3I90_00170 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D L3I90_13045 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D L3I90_13040 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D L3I90_12865 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D L3I90_12860 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D L3I90_02910 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:crk00562]
D L3I90_03880 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D L3I90_15955 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D L3I90_14985 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D L3I90_01085 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D L3I90_07330 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:crk00190]
D L3I90_01625 nuoH; NADH-quinone oxidoreductase subunit NuoH K05572 ndhA; NAD(P)H-quinone oxidoreductase subunit 1 [EC:7.1.1.2]
D L3I90_12910 NAD(P)H-quinone oxidoreductase subunit N K05573 ndhB; NAD(P)H-quinone oxidoreductase subunit 2 [EC:7.1.1.2]
D L3I90_03620 ndhC; photosynthetic/respiratory NAD(P)H-quinone oxidoreductase subunit C K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2]
D L3I90_04765 NADH-quinone oxidoreductase subunit M K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D L3I90_11110 NADH-quinone oxidoreductase subunit M K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D L3I90_13175 ndhD1; photosynthetic/respiratory NAD(P)H-quinone oxidoreductase subunit D1 K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D L3I90_13340 NAD(P)H-quinone oxidoreductase subunit 4 K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D L3I90_01610 nuoK; NADH-quinone oxidoreductase subunit NuoK K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D L3I90_01405 NAD(P)H-quinone oxidoreductase subunit 5 K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D L3I90_04770 NAD(P)H-quinone oxidoreductase subunit F K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D L3I90_11105 NAD(P)H-quinone oxidoreductase subunit F K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D L3I90_01615 NADH-quinone oxidoreductase subunit J K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2]
D L3I90_07755 NAD(P)H-quinone oxidoreductase subunit H K05579 ndhH; NAD(P)H-quinone oxidoreductase subunit H [EC:7.1.1.2]
D L3I90_01620 ndhI; NAD(P)H-quinone oxidoreductase subunit I K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2]
D L3I90_03610 NAD(P)H-quinone oxidoreductase subunit J K05581 ndhJ; NAD(P)H-quinone oxidoreductase subunit J [EC:7.1.1.2]
D L3I90_03615 NADH dehydrogenase subunit K K05582 ndhK; NAD(P)H-quinone oxidoreductase subunit K [EC:7.1.1.2]
D L3I90_07885 NAD(P)H-quinone oxidoreductase subunit L K05583 ndhL; NAD(P)H-quinone oxidoreductase subunit L [EC:7.1.1.2]
D L3I90_02515 NAD(P)H-quinone oxidoreductase subunit M K05584 ndhM; NAD(P)H-quinone oxidoreductase subunit M [EC:7.1.1.2]
D L3I90_02540 NAD(P)H-quinone oxidoreductase subunit N K05585 ndhN; NAD(P)H-quinone oxidoreductase subunit N [EC:7.1.1.2]
D L3I90_08850 hoxE; bidirectional hydrogenase complex protein HoxE K05586 hoxE; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D L3I90_08845 SLBB domain-containing protein K05587 hoxF; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D L3I90_08840 hoxU; bidirectional hydrogenase complex protein HoxU K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D L3I90_13530 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D L3I90_14805 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D L3I90_14480 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D L3I90_05875 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D L3I90_09405 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D L3I90_15925 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D L3I90_12410 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D L3I90_15595 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D L3I90_15905 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D L3I90_12415 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D L3I90_15600 cbb3-type cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D L3I90_15910 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D L3I90_12420 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D L3I90_15605 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D L3I90_15915 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D L3I90_15920 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D L3I90_01910 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D L3I90_01915 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D L3I90_09770 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D L3I90_08650 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D L3I90_09765 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D L3I90_09775 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D L3I90_08655 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D L3I90_09795 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D L3I90_09780 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D L3I90_09785 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D L3I90_09790 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D L3I90_10415 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D L3I90_16310 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis [PATH:crk00195]
D L3I90_00660 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_00680 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_00705 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_02780 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_08200 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_08490 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_11600 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_12170 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_16750 psbB; photosystem II chlorophyll-binding protein CP47 K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D L3I90_13635 psbC; photosystem II reaction center protein CP43 K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D L3I90_02000 psbD; photosystem II D2 protein (photosystem q(a) protein) K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D L3I90_13630 psbD; photosystem II D2 protein (photosystem q(a) protein) K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D L3I90_10760 psbE; cytochrome b559 subunit alpha K02707 psbE; photosystem II cytochrome b559 subunit alpha
D L3I90_10765 psbF; cytochrome b559 subunit beta K02708 psbF; photosystem II cytochrome b559 subunit beta
D L3I90_06200 psbH; photosystem II reaction center protein PsbH K02709 psbH; photosystem II PsbH protein
D L3I90_07350 photosystem II reaction center protein I K02710 psbI; photosystem II PsbI protein
D L3I90_10775 photosystem II reaction center protein J K02711 psbJ; photosystem II PsbJ protein
D L3I90_00790 photosystem II reaction center protein K K02712 psbK; photosystem II PsbK protein
D L3I90_10770 photosystem II reaction center protein L K02713 psbL; photosystem II PsbL protein
D L3I90_00800 photosystem II reaction center protein M K02714 psbM; photosystem II PsbM protein
D L3I90_04515 photosystem II manganese-stabilizing polypeptide K02716 psbO; photosystem II oxygen-evolving enhancer protein 1
D L3I90_14245 photosystem II reaction center PsbP family protein K02717 psbP; photosystem II oxygen-evolving enhancer protein 2
D L3I90_16745 photosystem II reaction center protein T K02718 psbT; photosystem II PsbT protein
D L3I90_15995 psbU; photosystem II complex extrinsic protein PsbU K02719 psbU; photosystem II PsbU protein
D L3I90_02890 psbV; cytochrome c-550 K02720 psbV; photosystem II cytochrome c550
D L3I90_05855 photosystem II reaction center X protein K02722 psbX; photosystem II PsbX protein
D L3I90_14385 photosystem II protein Y K02723 psbY; photosystem II PsbY protein
D L3I90_15675 psbZ; photosystem II reaction center protein PsbZ K02724 psbZ; photosystem II PsbZ protein
D L3I90_11790 psb27; photosystem II protein Psb27 K08902 psb27; photosystem II Psb27 protein
D L3I90_04590 psb28; photosystem II reaction center protein Psb28 K08903 psb28; photosystem II 13kDa protein
D L3I90_01530 psb28; photosystem II reaction center protein Psb28 K08904 psb28-2; photosystem II Psb28-2 protein
D L3I90_12435 psaA; photosystem I core protein PsaA K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D L3I90_12440 psaB; photosystem I core protein PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D L3I90_15820 psaC; photosystem I iron-sulfur center protein PsaC K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]
D L3I90_13310 photosystem I reaction center subunit II K02692 psaD; photosystem I subunit II
D L3I90_12855 photosystem I reaction center subunit IV K02693 psaE; photosystem I subunit IV
D L3I90_16485 Photosystem I reaction center subunit III K02694 psaF; photosystem I subunit III
D L3I90_01380 psaI; photosystem I reaction center subunit VIII K02696 psaI; photosystem I subunit VIII
D L3I90_16480 psaJ; photosystem I reaction center subunit IX K02697 psaJ; photosystem I subunit IX
D L3I90_11490 psaK; photosystem I reaction center subunit PsaK K02698 psaK; photosystem I subunit X
D L3I90_16475 photosystem I reaction center subunit XI K02699 psaL; photosystem I subunit XI
D L3I90_10355 photosystem I reaction center subunit XII K02700 psaM; photosystem I subunit XII
D L3I90_06095 photosystem I protein PsaX K02702 psaX; photosystem I 4.8kDa protein
D L3I90_16795 petA; apocytochrome f K02634 petA; apocytochrome f
D L3I90_10900 cytochrome b6 K02635 petB; cytochrome b6
D L3I90_13200 ubiquinol-cytochrome c reductase iron-sulfur subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D L3I90_16790 cytochrome b6-f complex iron-sulfur subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D L3I90_10905 petD; cytochrome b6-f complex subunit IV K02637 petD; cytochrome b6-f complex subunit 4
D L3I90_04405 petG; cytochrome b6-f complex subunit PetG K02640 petG; cytochrome b6-f complex subunit 5
D L3I90_16815 petL; cytochrome b6-f complex subunit PetL K02642 petL; cytochrome b6-f complex subunit 6
D L3I90_16510 cytochrome b6-f complex subunit PetM K02643 petM; cytochrome b6-f complex subunit 7
D L3I90_00735 petN; cytochrome b6-f complex subunit PetN K03689 petN; cytochrome b6-f complex subunit 8
D L3I90_02885 petE; plastocyanin K02638 petE; plastocyanin
D L3I90_03070 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin
D L3I90_03335 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin
D L3I90_03870 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin
D L3I90_15755 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin
D L3I90_06340 FAD-binding oxidoreductase K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2]
D L3I90_02880 c-type cytochrome K08906 petJ; cytochrome c6
D L3I90_10810 c-type cytochrome K08906 petJ; cytochrome c6
D L3I90_14900 c-type cytochrome K08906 petJ; cytochrome c6
D L3I90_08655 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D L3I90_08650 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D L3I90_09765 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D L3I90_09770 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D L3I90_09775 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D L3I90_09780 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D L3I90_09785 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D L3I90_09790 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D L3I90_09795 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
C 00196 Photosynthesis - antenna proteins [PATH:crk00196]
D L3I90_09920 apcA; allophycocyanin subunit alpha K02092 apcA; allophycocyanin alpha subunit
D L3I90_09915 apcB; allophycocyanin subunit beta K02093 apcB; allophycocyanin beta subunit
D L3I90_09910 phycobilisome linker polypeptide K02094 apcC; phycobilisome core linker protein
D L3I90_11485 allophycocyanin K02095 apcD; allophycocyanin-B
D L3I90_09925 phycobilisome rod-core linker polypeptide K02096 apcE; phycobilisome core-membrane linker protein
D L3I90_10710 apcB; allophycocyanin subunit beta K02097 apcF; phycobilisome core component
D L3I90_11385 cpcA; phycocyanin subunit alpha K02284 cpcA; phycocyanin alpha chain
D L3I90_11380 phycocyanin subunit beta K02285 cpcB; phycocyanin beta chain
D L3I90_11390 phycobilisome linker polypeptide K02286 cpcC; phycocyanin-associated rod linker protein
D L3I90_11395 phycobilisome linker polypeptide K02287 cpcD; phycocyanin-associated, rod
D L3I90_11400 HEAT repeat domain-containing protein K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32]
D L3I90_11405 HEAT repeat domain-containing protein K02289 cpcF; phycocyanobilin lyase subunit beta [EC:4.4.1.32]
D L3I90_07555 phycobilisome rod-core linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D L3I90_11410 phycobilisome rod-core linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D L3I90_11415 phycobilisome rod-core linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D L3I90_11420 phycobilisome rod-core linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
C 00710 Carbon fixation by Calvin cycle [PATH:crk00710]
D L3I90_07745 form I ribulose bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D L3I90_07735 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D L3I90_06805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D L3I90_07255 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D L3I90_07905 type I glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D L3I90_11745 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D L3I90_15360 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D L3I90_16590 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D L3I90_09420 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D L3I90_09195 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D L3I90_06335 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D L3I90_15445 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D L3I90_07330 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D L3I90_09035 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D L3I90_05420 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D L3I90_07245 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D L3I90_11945 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:crk00720]
D L3I90_06685 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_15320 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D L3I90_00555 glycerol-3-phosphate acyltransferase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_04470 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_15340 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_11945 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D L3I90_10440 aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D L3I90_14480 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D L3I90_05875 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D L3I90_09405 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D L3I90_13040 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D L3I90_13045 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D L3I90_09020 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D L3I90_07600 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D L3I90_01355 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D L3I90_13845 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D L3I90_05845 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D L3I90_02895 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D L3I90_04445 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D L3I90_03220 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D L3I90_10580 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:crk00680]
D L3I90_06395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D L3I90_04650 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D L3I90_11945 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D L3I90_11745 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D L3I90_15360 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D L3I90_16590 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D L3I90_15330 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D L3I90_10580 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D L3I90_00555 glycerol-3-phosphate acyltransferase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_04470 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_15340 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D L3I90_02700 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D L3I90_14955 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D L3I90_13030 2-phosphosulfolactate phosphatase family protein K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D L3I90_11785 cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofH K11781 cofH; 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase [EC:2.5.1.147]
D L3I90_14450 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG K11780 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase [EC:4.3.1.32]
C 00910 Nitrogen metabolism [PATH:crk00910]
D L3I90_13210 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D L3I90_13215 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D L3I90_13220 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D L3I90_13225 nitrate ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D L3I90_13230 nitrate reductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D L3I90_00575 hypothetical protein K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D L3I90_13205 ferredoxin--nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D L3I90_03120 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D L3I90_03115 nifK; nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D L3I90_03125 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D L3I90_10705 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D L3I90_16415 glutamate synthase-related protein K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D L3I90_14460 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
C 00920 Sulfur metabolism [PATH:crk00920]
D L3I90_15165 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D L3I90_15170 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D L3I90_15175 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D L3I90_15180 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D L3I90_00450 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D L3I90_14085 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D L3I90_10060 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D L3I90_09950 phosphorylase K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D L3I90_15475 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D L3I90_11285 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D L3I90_00235 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D L3I90_03925 sir; sulfite reductase, ferredoxin dependent K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D L3I90_05955 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D L3I90_11660 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D L3I90_14185 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:crk00061]
D L3I90_01355 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D L3I90_13845 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D L3I90_05845 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D L3I90_02895 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D L3I90_09410 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D L3I90_14640 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D L3I90_14635 beta-ketoacyl-ACP synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D L3I90_09415 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D L3I90_13615 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D L3I90_06775 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D L3I90_08795 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D L3I90_02500 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D L3I90_07280 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D L3I90_12780 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:crk00071]
D L3I90_12780 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D L3I90_15265 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:crk00100]
D L3I90_15020 phytoene/squalene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D L3I90_11930 sterol desaturase family protein K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:crk00561]
D L3I90_14280 glycerate kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D L3I90_12305 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D L3I90_12300 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D L3I90_14630 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D L3I90_15205 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D L3I90_07990 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D L3I90_14700 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D L3I90_13005 acyltransferase family protein K27539 K27539; diacylglycerol/phytol O-acyltransferase [EC:2.3.1.20 2.3.1.314]
D L3I90_15385 glycosyltransferase family 2 protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D L3I90_09310 bifunctional sterol desaturase/short chain dehydrogenase K20024 mgdE; monoglucosyldiacylglycerol epimerase [EC:5.1.3.34]
D L3I90_13280 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:crk00564]
D L3I90_01165 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D L3I90_15205 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D L3I90_07990 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D L3I90_14700 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D L3I90_00865 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D L3I90_02305 alkaline phosphatase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D L3I90_13320 esterase-like activity of phytase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D L3I90_08020 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D L3I90_00425 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:crk00600]
D L3I90_11925 bile acid beta-glucosidase K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:crk00230]
D L3I90_06940 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D L3I90_04750 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D L3I90_02480 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D L3I90_02245 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D L3I90_02200 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D L3I90_02475 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D L3I90_00955 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D L3I90_00960 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D L3I90_05660 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D L3I90_07970 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D L3I90_09325 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D L3I90_13265 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D L3I90_14825 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D L3I90_06480 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D L3I90_10935 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D L3I90_10650 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D L3I90_07140 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D L3I90_15160 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D L3I90_10600 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D L3I90_02190 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D L3I90_05595 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D L3I90_16470 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D L3I90_02355 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D L3I90_12970 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D L3I90_04010 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D L3I90_02640 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D L3I90_09950 phosphorylase K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D L3I90_15475 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D L3I90_10060 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D L3I90_03370 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D L3I90_03365 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D L3I90_03360 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:crk00240]
D L3I90_14890 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D L3I90_04820 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D L3I90_13365 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D L3I90_12080 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D L3I90_12485 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D L3I90_15325 dihydroorotate dehydrogenase-like protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D L3I90_02745 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D L3I90_01445 bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase K13421 UMPS; uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]
D L3I90_10915 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D L3I90_06830 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D L3I90_05890 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D L3I90_10600 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D L3I90_14250 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D L3I90_14225 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D L3I90_15115 bifunctional pantoate--beta-alanine ligase/(d)CMP kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D L3I90_10650 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D L3I90_16265 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D L3I90_12670 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D L3I90_03905 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D L3I90_15625 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D L3I90_02855 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D L3I90_09110 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:crk00250]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D L3I90_15990 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D L3I90_03255 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D L3I90_02755 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D L3I90_04370 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D L3I90_06435 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D L3I90_04655 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D L3I90_04010 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D L3I90_14825 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D L3I90_11810 aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15]
D L3I90_13365 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D L3I90_12900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D L3I90_05670 pruA; L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D L3I90_10705 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D L3I90_14890 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D L3I90_04820 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D L3I90_12425 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D L3I90_00960 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D L3I90_12845 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D L3I90_02480 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:crk00260]
D L3I90_07240 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D L3I90_03405 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D L3I90_06345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D L3I90_13355 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D L3I90_07775 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D L3I90_10610 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D L3I90_06395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D L3I90_02700 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D L3I90_14280 glycerate kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D L3I90_14955 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D L3I90_09110 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D L3I90_15650 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D L3I90_16780 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_16785 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D L3I90_07480 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D L3I90_07875 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D L3I90_03605 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:crk00270]
D L3I90_05955 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D L3I90_11660 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D L3I90_14185 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D L3I90_13180 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D L3I90_00985 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D L3I90_10075 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D L3I90_07140 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D L3I90_12445 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D L3I90_03635 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_07360 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_08030 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D L3I90_07125 pyridoxal-phosphate dependent enzyme K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D L3I90_07240 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D L3I90_03405 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D L3I90_06345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D L3I90_07915 homocysteine biosynthesis protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D L3I90_11530 4Fe-4S binding protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D L3I90_04535 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D L3I90_14955 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:crk00280]
D L3I90_01715 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_07765 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:crk00290]
D L3I90_07480 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D L3I90_12865 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D L3I90_12860 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D L3I90_02910 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D L3I90_03975 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D L3I90_12895 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D L3I90_00170 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D L3I90_14800 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D L3I90_01175 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D L3I90_01715 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D L3I90_01580 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D L3I90_00545 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D L3I90_08060 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:crk00300]
D L3I90_06345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D L3I90_07240 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D L3I90_03405 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D L3I90_03400 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D L3I90_13685 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D L3I90_08935 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D L3I90_06045 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D L3I90_09105 aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D L3I90_13000 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D L3I90_11200 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D L3I90_02170 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D L3I90_01320 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:crk00310]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_12900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D L3I90_11890 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:crk00220]
D L3I90_12985 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D L3I90_06435 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D L3I90_04655 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D L3I90_00980 TIGR00300 family protein K27542 argZ; arginine dihydrolase [EC:3.5.3.27]
D L3I90_03370 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D L3I90_03365 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D L3I90_03360 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D L3I90_12425 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D L3I90_00960 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D L3I90_10705 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D L3I90_14890 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D L3I90_04820 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D L3I90_12500 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D L3I90_03485 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D L3I90_04605 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D L3I90_08935 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:crk00330]
D L3I90_09120 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D L3I90_03540 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D L3I90_03520 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D L3I90_01545 agmatinase family protein K01480 speB; agmatinase [EC:3.5.3.11]
D L3I90_13750 agmatinase family protein K01480 speB; agmatinase [EC:3.5.3.11]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D L3I90_12475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D L3I90_00980 TIGR00300 family protein K27542 argZ; arginine dihydrolase [EC:3.5.3.27]
D L3I90_07960 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D L3I90_05670 pruA; L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D L3I90_12935 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D L3I90_13190 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D L3I90_15655 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:crk00340]
D L3I90_10370 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D L3I90_03885 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D L3I90_06085 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D L3I90_16095 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D L3I90_04395 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D L3I90_05135 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D L3I90_05140 wbuZ; glycosyl amidation-associated protein WbuZ K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D L3I90_13665 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D L3I90_07275 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D L3I90_04140 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D L3I90_10250 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D L3I90_11810 aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15]
D L3I90_09895 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:crk00350]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D L3I90_04140 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D L3I90_02130 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D L3I90_15265 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D L3I90_12900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:crk00360]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D L3I90_04140 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D L3I90_02130 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D L3I90_12475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:crk00380]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D L3I90_12475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:crk00400]
D L3I90_15395 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D L3I90_01745 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D L3I90_16820 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D L3I90_12925 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D L3I90_03480 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D L3I90_02845 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D L3I90_06060 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D L3I90_13305 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D L3I90_14705 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D L3I90_04810 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D L3I90_05835 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D L3I90_04740 indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D L3I90_09715 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D L3I90_07875 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D L3I90_03605 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D L3I90_08630 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D L3I90_12310 prephenate/arogenate dehydrogenase K15226 tyrAa; arogenate dehydrogenase (NADP+) [EC:1.3.1.78]
D L3I90_16735 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D L3I90_04140 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:crk00410]
D L3I90_10410 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D L3I90_15115 bifunctional pantoate--beta-alanine ligase/(d)CMP kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
C 00430 Taurine and hypotaurine metabolism
D L3I90_04370 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:crk00440]
D L3I90_12030 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D L3I90_12035 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D L3I90_11570 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D L3I90_12050 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D L3I90_12015 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D L3I90_11580 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D L3I90_12010 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D L3I90_12025 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:crk00450]
D L3I90_13180 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D L3I90_10120 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D L3I90_10060 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D L3I90_00185 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:crk00460]
D L3I90_03255 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D L3I90_02755 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D L3I90_06395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:crk00470]
D L3I90_12600 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D L3I90_15425 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D L3I90_12425 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D L3I90_00960 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D L3I90_14970 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D L3I90_07485 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D L3I90_13955 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D L3I90_13950 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D L3I90_06045 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D L3I90_11200 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:crk00480]
D L3I90_03535 hydantoinase/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D L3I90_04535 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D L3I90_00175 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D L3I90_02315 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D L3I90_10730 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D L3I90_12105 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D L3I90_10385 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D L3I90_09020 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D L3I90_13520 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D L3I90_15355 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:crk00515]
D L3I90_06530 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:crk00514]
D L3I90_06530 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:crk00511]
D L3I90_06190 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D L3I90_11925 bile acid beta-glucosidase K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:crk00540]
D L3I90_02495 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D L3I90_02505 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D L3I90_06220 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D L3I90_02490 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D L3I90_05430 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D L3I90_05440 hypothetical protein K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
C 00542 O-Antigen repeat unit biosynthesis [PATH:crk00542]
D L3I90_06770 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:crk00541]
D L3I90_02410 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_05405 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_05460 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D L3I90_09510 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D L3I90_02975 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D L3I90_02860 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D L3I90_06255 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D L3I90_06260 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D L3I90_06250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D L3I90_11870 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D L3I90_06245 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D L3I90_11895 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D L3I90_05470 NAD-dependent epimerase/dehydratase family protein K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D L3I90_08715 NAD-dependent epimerase/dehydratase family protein K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D L3I90_16425 cupin domain-containing protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D L3I90_11140 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D L3I90_08980 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D L3I90_08985 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D L3I90_10715 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D L3I90_15035 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D L3I90_05105 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D L3I90_05315 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D L3I90_05325 SDR family oxidoreductase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:crk00550]
D L3I90_06580 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D L3I90_07895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D L3I90_07900 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D L3I90_07485 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D L3I90_02170 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D L3I90_15425 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D L3I90_01320 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D L3I90_11210 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D L3I90_16005 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D L3I90_12755 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D L3I90_08665 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D L3I90_06955 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D L3I90_06820 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D L3I90_09935 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D L3I90_12355 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D L3I90_14840 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D L3I90_00905 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D L3I90_00835 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D L3I90_00830 type 1 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:crk00552]
D L3I90_16005 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D L3I90_06770 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D L3I90_14600 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D L3I90_11085 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D L3I90_11145 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:crk00543]
D L3I90_06770 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D L3I90_05955 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:crk00730]
D L3I90_15945 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D L3I90_01990 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_03135 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_13640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_09200 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D L3I90_08070 thiO; glycine oxidase ThiO K03149 thiG; thiazole synthase [EC:2.8.1.10]
D L3I90_09980 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D L3I90_07910 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D L3I90_02025 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D L3I90_02640 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:crk00740]
D L3I90_04600 ribA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase RibB/GTP cyclohydrolase II RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D L3I90_11320 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D L3I90_15670 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D L3I90_00720 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D L3I90_03265 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D L3I90_14085 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D L3I90_06940 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D L3I90_14685 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:crk00750]
D L3I90_03500 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D L3I90_06520 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D L3I90_04415 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D L3I90_07775 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D L3I90_10610 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:crk00760]
D L3I90_15990 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D L3I90_00490 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D L3I90_16835 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D L3I90_10650 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D L3I90_07405 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D L3I90_07395 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D L3I90_01605 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D L3I90_16520 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D L3I90_02920 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D L3I90_02925 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D L3I90_02915 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D L3I90_12900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:crk00770]
D L3I90_03975 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D L3I90_12895 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D L3I90_00170 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D L3I90_14800 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D L3I90_01175 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D L3I90_07750 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D L3I90_15115 bifunctional pantoate--beta-alanine ligase/(d)CMP kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D L3I90_04625 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D L3I90_16740 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D L3I90_03230 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D L3I90_08820 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D L3I90_11770 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D L3I90_10410 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:crk00780]
D L3I90_09415 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D L3I90_13615 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D L3I90_06775 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D L3I90_08795 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D L3I90_02500 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D L3I90_07280 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D L3I90_01220 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D L3I90_10445 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D L3I90_02060 saccharopine dehydrogenase-like oxidoreductase K25570 bioU; 8-amino-7-oxononanoate carboxylating dehydrogenase [EC:2.6.1.121]
D L3I90_16810 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D L3I90_00730 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:crk00785]
D L3I90_12810 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D L3I90_00455 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D L3I90_01170 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D L3I90_02365 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_15375 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D L3I90_15420 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D L3I90_12765 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D L3I90_15650 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D L3I90_16780 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D L3I90_16785 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:crk00790]
D L3I90_01345 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D L3I90_01845 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D L3I90_06945 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D L3I90_07325 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D L3I90_14390 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D L3I90_04600 ribA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase RibB/GTP cyclohydrolase II RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D L3I90_06525 pabB; aminodeoxychorismate synthase component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D L3I90_12535 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D L3I90_09425 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D L3I90_11095 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D L3I90_00495 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D L3I90_11040 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D L3I90_03295 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D L3I90_07530 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D L3I90_00515 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D L3I90_14520 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D L3I90_12660 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D L3I90_04595 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D L3I90_14350 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D L3I90_15685 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:crk00670]
D L3I90_04445 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D L3I90_06395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D L3I90_02200 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D L3I90_06480 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D L3I90_15810 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D L3I90_16780 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D L3I90_13180 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D L3I90_02855 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D L3I90_03220 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D L3I90_08990 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:crk00860]
D L3I90_02110 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D L3I90_16585 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D L3I90_06090 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D L3I90_03275 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D L3I90_09335 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D L3I90_09340 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D L3I90_06075 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D L3I90_03010 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D L3I90_05830 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D L3I90_14865 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D L3I90_03960 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D L3I90_14820 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D L3I90_10960 uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D L3I90_11365 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D L3I90_15925 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D L3I90_15920 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D L3I90_11360 sirohydrochlorin chelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D L3I90_00565 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D L3I90_00560 cobJ; precorrin-3B C(17)-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D L3I90_03240 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D L3I90_09130 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D L3I90_05730 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D L3I90_05590 cbiD; cobalt-precorrin-5B (C(1))-methyltransferase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D L3I90_04690 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D L3I90_08025 cbiT; precorrin-6Y C5,15-methyltransferase subunit CbiT K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D L3I90_00570 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D L3I90_01640 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D L3I90_01150 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D L3I90_13995 P-loop NTPase family protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D L3I90_02235 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D L3I90_14835 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D L3I90_03825 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D L3I90_12675 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D L3I90_12830 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D L3I90_00440 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D L3I90_01210 bchH; magnesium chelatase subunit H K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D L3I90_04895 magnesium chelatase subunit H K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D L3I90_04165 bchD; magnesium chelatase ATPase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D L3I90_15365 bchI; magnesium chelatase ATPase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D L3I90_09855 bchM; magnesium protoporphyrin IX methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D L3I90_08955 bchE; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D L3I90_01240 acsF; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D L3I90_06330 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13]
D L3I90_06875 protochlorophyllide reductase K00218 por; protochlorophyllide reductase [EC:1.3.1.33]
D L3I90_00160 bchL; ferredoxin:protochlorophyllide reductase (ATP-dependent) iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D L3I90_00150 ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D L3I90_07585 ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D L3I90_01970 chlG; chlorophyll synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D L3I90_00445 chlP; geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D L3I90_05780 pyridoxamine 5'-phosphate oxidase family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D L3I90_05825 heme oxygenase (biliverdin-producing) K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D L3I90_09385 heme oxygenase (biliverdin-producing) K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D L3I90_14075 Gfo/Idh/MocA family oxidoreductase K00214 BLVRA; biliverdin reductase [EC:1.3.1.24]
D L3I90_14255 phycocyanobilin:ferredoxin oxidoreductase K05371 pcyA; phycocyanobilin:ferredoxin oxidoreductase [EC:1.3.7.5]
D L3I90_15695 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:crk00130]
D L3I90_02460 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D L3I90_12965 4-hydroxybenzoate solanesyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D L3I90_01265 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D L3I90_14685 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D L3I90_10470 FAD-dependent hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D L3I90_09810 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D L3I90_01850 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D L3I90_04480 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D L3I90_09820 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D L3I90_09825 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D L3I90_10505 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D L3I90_09830 acyl-CoA thioesterase K12073 E3.1.2.28; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D L3I90_09815 menA; 2-carboxy-1,4-naphthoquinone phytyltransferase K23094 ABC4; 2-carboxy-1,4-naphthoquinone phytyltransferase [EC:2.5.1.130]
D L3I90_11710 NAD(P)/FAD-dependent oxidoreductase K17872 NDC1; demethylphylloquinone reductase [EC:1.6.5.12]
D L3I90_06125 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K23095 MENG; demethylphylloquinol methyltransferase [EC:2.1.1.329]
D L3I90_02130 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D L3I90_10970 homogentisate phytyltransferase K09833 HPT; homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:2.5.1.115 2.5.1.116]
D L3I90_01335 tocopherol cyclase family protein K09834 VTE1; tocopherol cyclase [EC:5.5.1.24]
D L3I90_10975 methyltransferase domain-containing protein K05928 E2.1.1.95; tocopherol O-methyltransferase [EC:2.1.1.95]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:crk00900]
D L3I90_09200 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D L3I90_16350 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D L3I90_04065 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D L3I90_04715 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D L3I90_04670 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D L3I90_09265 ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D L3I90_10510 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D L3I90_14685 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D L3I90_07375 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D L3I90_04440 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D L3I90_06785 sds; solanesyl diphosphate synthase K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
D L3I90_11210 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D L3I90_00445 chlP; geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:crk00909]
D L3I90_15020 phytoene/squalene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D L3I90_15740 shc; squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:crk00906]
D L3I90_06360 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D L3I90_06365 pds; 15-cis-phytoene desaturase K02293 PDS; 15-cis-phytoene desaturase [EC:1.3.5.5]
D L3I90_01395 hypothetical protein K15744 Z-ISO; zeta-carotene isomerase [EC:5.2.1.12]
D L3I90_09045 zds; 9,9'-di-cis-zeta-carotene desaturase K00514 ZDS; zeta-carotene desaturase [EC:1.3.5.6]
D L3I90_02430 FAD-dependent oxidoreductase K14605 cruA; lycopene cyclase CruA [EC:5.5.1.19]
D L3I90_09315 FAD-binding oxidoreductase K14606 cruP; lycopene cyclase CruP [EC:5.5.1.19]
D L3I90_11235 NAD(P)/FAD-dependent oxidoreductase K02292 crtO; beta-carotene ketolase (CrtO type)
D L3I90_01010 fatty acid desaturase K02294 crtR; beta-carotene hydroxylase [EC:1.14.13.-]
D L3I90_11555 glycosyl transferase family 1 K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D L3I90_09420 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:crk00523]
D L3I90_06255 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D L3I90_06260 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D L3I90_06250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D L3I90_11870 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D L3I90_06245 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D L3I90_09810 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D L3I90_06260 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D L3I90_01535 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:crk00332]
D L3I90_12935 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D L3I90_13190 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D L3I90_15655 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:crk00261]
D L3I90_08790 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
D L3I90_10060 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D L3I90_07240 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D L3I90_03405 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D L3I90_03400 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D L3I90_13685 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:crk00521]
D L3I90_15380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D L3I90_02345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_07560 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_03880 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D L3I90_15955 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D L3I90_06255 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D L3I90_06260 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D L3I90_06250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D L3I90_11870 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D L3I90_06245 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D L3I90_15380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D L3I90_02345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D L3I90_07560 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:crk00525]
D L3I90_06255 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D L3I90_06260 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:crk00401]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D L3I90_04140 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D L3I90_13305 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D L3I90_14705 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D L3I90_14640 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D L3I90_06775 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D L3I90_08795 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D L3I90_07280 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D L3I90_09410 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D L3I90_00985 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation [PATH:crk00627]
D L3I90_12475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D L3I90_00815 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D L3I90_14685 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:crk00364]
D L3I90_01595 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:crk00625]
D L3I90_15265 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D L3I90_03375 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D L3I90_03115 nifK; nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D L3I90_03125 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D L3I90_03120 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:crk00361]
D L3I90_01595 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:crk00623]
D L3I90_01595 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:crk00633]
D L3I90_01275 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D L3I90_07130 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D L3I90_07135 hydrogenase small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:crk00643]
D L3I90_12475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D L3I90_03370 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D L3I90_03365 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D L3I90_03360 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:crk00626]
D L3I90_15265 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:crk03020]
D L3I90_10235 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D L3I90_10225 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D L3I90_10230 DNA-directed RNA polymerase subunit gamma K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D L3I90_02665 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D L3I90_09005 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:crk03010]
D L3I90_01590 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D L3I90_06920 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D L3I90_06460 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D L3I90_02575 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D L3I90_00520 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D L3I90_02625 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D L3I90_06415 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D L3I90_16440 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D L3I90_02610 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D L3I90_02685 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D L3I90_16455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D L3I90_02660 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D L3I90_16435 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D L3I90_02655 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D L3I90_14905 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D L3I90_01755 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D L3I90_02805 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D L3I90_02590 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D L3I90_09540 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D L3I90_02565 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D L3I90_10245 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D L3I90_11275 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D L3I90_11300 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D L3I90_13555 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D L3I90_02560 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D L3I90_02545 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D L3I90_02550 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D L3I90_02605 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D L3I90_02615 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D L3I90_13545 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D L3I90_01125 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D L3I90_13550 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D L3I90_13560 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D L3I90_02680 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D L3I90_02595 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D L3I90_02630 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D L3I90_02580 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D L3I90_02670 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D L3I90_02620 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D L3I90_13580 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D L3I90_07720 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D L3I90_07090 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D L3I90_02570 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D L3I90_02555 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D L3I90_02600 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D L3I90_04005 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D L3I90_07095 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D L3I90_09230 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D L3I90_02585 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D L3I90_02690 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D L3I90_03380 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D L3I90_09545 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D L3I90_02935 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D L3I90_07715 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D L3I90_02650 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D L3I90_13875 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D L3I90_16840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D L3I90_13890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:crk00970]
D L3I90_02470 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D L3I90_15010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D L3I90_13885 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D L3I90_16850 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D L3I90_15630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D L3I90_14515 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D L3I90_01340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D L3I90_03915 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D L3I90_02020 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D L3I90_02105 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D L3I90_00915 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D L3I90_15195 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D L3I90_02865 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D L3I90_16770 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D L3I90_15665 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D L3I90_12360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D L3I90_11345 tRNA-His K14226 tRNA-His; tRNA His
D L3I90_13880 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D L3I90_16845 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D L3I90_12605 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D L3I90_06575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D L3I90_05840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D L3I90_16530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D L3I90_06380 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D L3I90_14240 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D L3I90_03260 tRNA-Met K14230 tRNA-Met; tRNA Met
D L3I90_06660 tRNA-Met K14230 tRNA-Met; tRNA Met
D L3I90_03955 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D L3I90_08995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D L3I90_16505 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D L3I90_10165 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D L3I90_16090 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D L3I90_03865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D L3I90_13860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D L3I90_01375 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D L3I90_12980 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D L3I90_07145 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D L3I90_14910 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D L3I90_13575 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D L3I90_14915 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D L3I90_12295 tRNA-Val K14237 tRNA-Val; tRNA Val
D L3I90_14445 tRNA-Val K14237 tRNA-Val; tRNA Val
D L3I90_02110 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D L3I90_09550 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D L3I90_12495 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D L3I90_02160 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D L3I90_13760 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D L3I90_12615 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D L3I90_11460 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D L3I90_13870 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D L3I90_07490 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D L3I90_13335 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D L3I90_03060 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D L3I90_04580 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D L3I90_00185 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D L3I90_15810 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D L3I90_03835 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D L3I90_01835 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D L3I90_15185 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D L3I90_15140 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D L3I90_02145 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D L3I90_13855 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D L3I90_04360 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D L3I90_10645 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D L3I90_13370 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D L3I90_06825 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D L3I90_03215 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:crk03060]
D L3I90_02635 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D L3I90_13570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D L3I90_02705 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D L3I90_15415 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D L3I90_15410 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D L3I90_02950 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D L3I90_09235 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D L3I90_02800 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D L3I90_04350 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D L3I90_07230 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D L3I90_16025 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D L3I90_06205 TatA/E family twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D L3I90_10455 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D L3I90_10315 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D L3I90_12075 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D L3I90_16060 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:crk04122]
D L3I90_01990 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_03135 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_13640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_06725 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D L3I90_12660 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D L3I90_00515 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D L3I90_07770 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D L3I90_07780 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D L3I90_00785 moeB; molybdopterin-synthase adenylyltransferase MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D L3I90_14520 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D L3I90_04595 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D L3I90_06030 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:crk03018]
D L3I90_16720 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D L3I90_04650 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D L3I90_07305 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D L3I90_14680 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D L3I90_15965 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D L3I90_10680 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D L3I90_12785 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D L3I90_03395 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D L3I90_11230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_13915 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_06765 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_15080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_06040 hypothetical protein K03666 hfq; host factor-I protein
D L3I90_16310 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:crk03030]
D L3I90_02070 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_14355 trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_06910 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D L3I90_15620 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D L3I90_03200 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D L3I90_04225 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D L3I90_01115 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D L3I90_03845 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D L3I90_07115 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D L3I90_16725 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D L3I90_00855 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:crk03410]
D L3I90_02765 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D L3I90_12490 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D L3I90_12850 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D L3I90_09560 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D L3I90_03545 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D L3I90_00225 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D L3I90_04175 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D L3I90_00855 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:crk03420]
D L3I90_09175 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D L3I90_06620 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D L3I90_07440 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D L3I90_10020 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D L3I90_06155 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D L3I90_06355 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D L3I90_00855 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:crk03430]
D L3I90_04465 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D L3I90_04150 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D L3I90_14165 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D L3I90_06155 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D L3I90_06355 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D L3I90_00225 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D L3I90_04175 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D L3I90_02070 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_14355 trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_04225 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D L3I90_06910 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D L3I90_03200 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D L3I90_15620 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D L3I90_00855 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D L3I90_07655 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D L3I90_10800 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:crk03440]
D L3I90_00225 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D L3I90_04175 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D L3I90_06490 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D L3I90_02725 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D L3I90_02375 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D L3I90_00775 recA; recombinase RecA K03553 recA; recombination protein RecA
D L3I90_01225 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D L3I90_13660 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D L3I90_01430 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D L3I90_06475 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D L3I90_04100 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D L3I90_11080 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D L3I90_02070 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_14355 trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_04225 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D L3I90_06910 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D L3I90_03200 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D L3I90_15620 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D L3I90_10820 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:crk03250]
D L3I90_04080 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:crk02010]
D L3I90_15165 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D L3I90_15170 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D L3I90_15175 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D L3I90_15180 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D L3I90_00450 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D L3I90_13210 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D L3I90_13215 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D L3I90_13220 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D L3I90_13225 nitrate ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D L3I90_12710 ABC transporter substrate-binding protein K11950 cmpA; bicarbonate transport system substrate-binding protein
D L3I90_12715 ntrB; nitrate ABC transporter permease K11951 cmpB; bicarbonate transport system permease protein
D L3I90_12720 nitrate ABC transporter ATP-binding protein K11952 cmpC; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D L3I90_06305 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D L3I90_01460 modB; molybdate ABC transporter permease subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D L3I90_09865 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D L3I90_09860 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D L3I90_02075 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D L3I90_11915 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D L3I90_14395 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D L3I90_10570 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D L3I90_06595 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein
D L3I90_06555 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D L3I90_05695 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D L3I90_13985 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D L3I90_06560 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D L3I90_08950 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_10475 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_15285 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_10480 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D L3I90_10485 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D L3I90_06935 ATP-binding cassette domain-containing protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D L3I90_10490 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D L3I90_00245 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D L3I90_11620 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D L3I90_00255 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D L3I90_11615 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D L3I90_00250 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D L3I90_11625 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D L3I90_02290 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D L3I90_02295 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D L3I90_02300 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D L3I90_02310 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D L3I90_03440 ABC transporter substrate-binding protein K11954 natB; neutral amino acid transport system substrate-binding protein
D L3I90_04035 branched-chain amino acid ABC transporter permease K11955 natC; neutral amino acid transport system permease protein
D L3I90_06100 branched-chain amino acid ABC transporter permease K11956 natD; neutral amino acid transport system permease protein
D L3I90_15295 ABC transporter ATP-binding protein K11957 natA; neutral amino acid transport system ATP-binding protein
D L3I90_03895 ABC transporter ATP-binding protein K11958 natE; neutral amino acid transport system ATP-binding protein
D L3I90_14200 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D L3I90_14205 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein
D L3I90_14210 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D L3I90_14215 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D L3I90_14220 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D L3I90_03935 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D L3I90_03945 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D L3I90_03940 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D L3I90_11990 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D L3I90_11995 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D L3I90_15705 PDGLE domain-containing protein K02007 cbiM; cobalt/nickel transport system permease protein
D L3I90_11985 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D L3I90_15710 energy-coupling factor transporter transmembrane protein EcfT K02008 cbiQ; cobalt/nickel transport system permease protein
D L3I90_11980 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D L3I90_15715 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D L3I90_16055 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D L3I90_10185 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D L3I90_02010 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D L3I90_09255 energy-coupling factor ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D L3I90_08595 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D L3I90_09525 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D L3I90_03590 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D L3I90_03585 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D L3I90_11840 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D L3I90_02400 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D L3I90_10390 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D L3I90_03785 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_13405 cysteine peptidase family C39 domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_15835 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_08705 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
D L3I90_14335 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
C 03070 Bacterial secretion system [PATH:crk03070]
D L3I90_13980 TolC family protein K12340 tolC; outer membrane protein
D L3I90_03790 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_13410 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_15830 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_03785 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_13405 cysteine peptidase family C39 domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_15835 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_15415 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D L3I90_15410 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D L3I90_13570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D L3I90_02705 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D L3I90_02635 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D L3I90_02950 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D L3I90_09235 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D L3I90_04350 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D L3I90_02800 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D L3I90_06205 TatA/E family twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D L3I90_10455 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:crk02020]
D L3I90_16105 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D L3I90_16100 response regulator transcription factor K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D L3I90_08950 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_10475 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_15285 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_07420 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D L3I90_10825 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D L3I90_10830 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D L3I90_10835 kdpC; K(+)-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D L3I90_15920 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D L3I90_16315 HAMP domain-containing histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D L3I90_10365 response regulator transcription factor K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D L3I90_02240 cell wall metabolism sensor histidine kinase WalK K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D L3I90_16525 response regulator transcription factor K11332 nblR; two-component system, OmpR family, response regulator NblR
D L3I90_16290 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D L3I90_11765 response regulator transcription factor K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D L3I90_06235 response regulator transcription factor K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D L3I90_14005 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D L3I90_00905 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D L3I90_09115 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D L3I90_06315 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D L3I90_10945 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D L3I90_10705 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D L3I90_05545 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D L3I90_07135 hydrogenase small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D L3I90_07130 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D L3I90_15345 PAS domain S-box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D L3I90_12555 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D L3I90_11370 response regulator K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D L3I90_12425 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D L3I90_01145 GAF domain-containing sensor histidine kinase K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D L3I90_01910 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D L3I90_01915 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D L3I90_13980 TolC family protein K12340 tolC; outer membrane protein
D L3I90_07265 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D L3I90_01880 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D L3I90_15035 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:crk02024]
D L3I90_06040 hypothetical protein K03666 hfq; host factor-I protein
D L3I90_13305 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D L3I90_14705 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D L3I90_15395 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D L3I90_09015 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D L3I90_12780 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D L3I90_11320 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D L3I90_04665 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D L3I90_16755 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D L3I90_10940 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D L3I90_16760 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D L3I90_05570 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D L3I90_16765 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D L3I90_08050 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D L3I90_16545 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D L3I90_02950 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D L3I90_13570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D L3I90_02705 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D L3I90_02635 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D L3I90_09235 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D L3I90_04350 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D L3I90_02800 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:crk02030]
D L3I90_12555 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D L3I90_15345 PAS domain S-box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
C 02040 Flagellar assembly
D L3I90_08610 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D L3I90_10815 RpoD/SigA family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D L3I90_04650 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:crk04980]
D L3I90_13995 P-loop NTPase family protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D L3I90_13180 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:crk01501]
D L3I90_13150 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D L3I90_06370 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D L3I90_01535 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D L3I90_13980 TolC family protein K12340 tolC; outer membrane protein
D L3I90_06955 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D L3I90_06820 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D L3I90_09935 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D L3I90_12355 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:crk01502]
D L3I90_14005 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D L3I90_15425 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D L3I90_12600 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D L3I90_01320 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D L3I90_12755 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D L3I90_08665 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D L3I90_00905 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:crk01503]
D L3I90_01205 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D L3I90_14230 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D L3I90_14975 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D L3I90_04080 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D L3I90_13980 TolC family protein K12340 tolC; outer membrane protein
D L3I90_02495 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:crk01000]
C 01001 Protein kinases [BR:crk01001]
D L3I90_14590 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D L3I90_10910 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D L3I90_05535 serine/threonine-protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D L3I90_15290 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D L3I90_04095 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D L3I90_11855 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D L3I90_15730 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D L3I90_05390 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D L3I90_16105 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D L3I90_07420 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D L3I90_16315 HAMP domain-containing histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D L3I90_02240 cell wall metabolism sensor histidine kinase WalK K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D L3I90_16290 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D L3I90_01145 GAF domain-containing sensor histidine kinase K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:crk01009]
D L3I90_08030 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D L3I90_10215 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D L3I90_10850 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D L3I90_14035 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:crk01002]
D L3I90_16060 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D L3I90_02900 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D L3I90_02790 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D L3I90_05595 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D L3I90_02480 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D L3I90_16415 glutamate synthase-related protein K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D L3I90_12845 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D L3I90_03320 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D L3I90_06295 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D L3I90_16700 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D L3I90_02315 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D L3I90_00810 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D L3I90_00905 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D L3I90_14005 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D L3I90_12205 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D L3I90_14365 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D L3I90_09145 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D L3I90_10285 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D L3I90_00175 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D L3I90_12470 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D L3I90_14070 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D L3I90_07790 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D L3I90_03525 ftsH2; ATP-dependent zinc metalloprotease FtsH2 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D L3I90_07410 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D L3I90_12540 ftsH3; ATP-dependent zinc metalloprotease FtsH3 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D L3I90_13815 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D L3I90_07570 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D L3I90_14840 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D L3I90_03415 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D L3I90_11255 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D L3I90_11260 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D L3I90_11265 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D L3I90_14670 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D L3I90_11075 brxL; protease Lon-related BREX system protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D L3I90_16460 LON peptidase substrate-binding domain-containing protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D L3I90_00085 brxL; BREX system Lon protease-like protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D L3I90_12990 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D L3I90_10315 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D L3I90_12075 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D L3I90_04180 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D L3I90_10895 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D L3I90_14925 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D L3I90_07380 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D L3I90_08635 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D L3I90_04680 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D L3I90_06065 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D L3I90_10495 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D L3I90_02755 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D L3I90_04310 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D L3I90_00135 TldD/PmbA family protein K03592 pmbA; PmbA protein
D L3I90_08080 TldD/PmbA family protein K03592 pmbA; PmbA protein
D L3I90_08075 TldD/PmbA family protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:crk01003]
D L3I90_07110 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D L3I90_11780 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D L3I90_06530 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D L3I90_15385 glycosyltransferase family 2 protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D L3I90_09345 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D L3I90_11240 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D L3I90_06955 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D L3I90_06820 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D L3I90_14600 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D L3I90_06770 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D L3I90_11555 glycosyl transferase family 1 K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276]
D L3I90_12565 glycosyltransferase family 4 protein K03867 BGLUT; UDP-glucose:tetrahydrobiopterin glucosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:crk01005]
D L3I90_02495 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D L3I90_02490 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D L3I90_02505 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D L3I90_06220 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D L3I90_05430 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D L3I90_06770 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:crk01011]
D L3I90_06580 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D L3I90_07895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D L3I90_07900 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D L3I90_07485 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D L3I90_02170 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D L3I90_15425 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D L3I90_12600 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D L3I90_14970 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D L3I90_06065 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D L3I90_10495 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D L3I90_12755 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D L3I90_08665 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D L3I90_16005 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D L3I90_06705 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D L3I90_06955 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D L3I90_06820 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D L3I90_09935 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D L3I90_12355 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D L3I90_14840 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D L3I90_14005 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D L3I90_00905 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D L3I90_10460 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D L3I90_01465 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D L3I90_07615 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D L3I90_15120 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D L3I90_15735 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D L3I90_01205 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D L3I90_14230 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D L3I90_14975 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:crk01004]
D L3I90_14640 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D L3I90_14635 beta-ketoacyl-ACP synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D L3I90_09415 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D L3I90_13615 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D L3I90_06775 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D L3I90_08795 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D L3I90_02500 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D L3I90_07280 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D L3I90_06315 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D L3I90_06310 fatty acid desaturase K10257 FAD3; acyl-lipid omega-3 desaturase [EC:1.14.19.25 1.14.19.35 1.14.19.36]
D L3I90_10580 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D L3I90_12780 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D L3I90_14630 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D L3I90_15205 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D L3I90_07990 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:crk01008]
D L3I90_01765 PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains
D L3I90_08790 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
C 01006 Prenyltransferases [BR:crk01006]
D L3I90_04440 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D L3I90_06785 sds; solanesyl diphosphate synthase K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
D L3I90_11210 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D L3I90_15020 phytoene/squalene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D L3I90_06360 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D L3I90_08600 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D L3I90_10970 homogentisate phytyltransferase K09833 HPT; homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:2.5.1.115 2.5.1.116]
D L3I90_12965 4-hydroxybenzoate solanesyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D L3I90_15925 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D L3I90_01970 chlG; chlorophyll synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:crk01007]
D L3I90_15140 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D L3I90_02110 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D L3I90_06825 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D L3I90_03215 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D L3I90_04580 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D L3I90_02145 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D L3I90_00185 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D L3I90_15185 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D L3I90_03835 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D L3I90_01835 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D L3I90_12615 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D L3I90_11460 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D L3I90_04360 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D L3I90_13870 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D L3I90_07490 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D L3I90_03060 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D L3I90_13855 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D L3I90_13335 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D L3I90_13760 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D L3I90_10645 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D L3I90_13370 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D L3I90_02180 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D L3I90_01580 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D L3I90_09105 aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D L3I90_13000 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D L3I90_04140 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D L3I90_01220 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D L3I90_08935 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D L3I90_06090 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
C 00199 Cytochrome P450 [BR:crk00199]
D L3I90_07005 cytochrome P450 K23139 CYP110; cytochrome P450 family 110 [EC:1.14.-.-]
C 00194 Photosynthesis proteins [BR:crk00194]
D L3I90_00660 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_00680 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_00705 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_02780 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_08200 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_08490 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_11600 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_12170 psbA; photosystem II q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D L3I90_02000 psbD; photosystem II D2 protein (photosystem q(a) protein) K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D L3I90_13630 psbD; photosystem II D2 protein (photosystem q(a) protein) K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D L3I90_13635 psbC; photosystem II reaction center protein CP43 K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D L3I90_16750 psbB; photosystem II chlorophyll-binding protein CP47 K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D L3I90_10760 psbE; cytochrome b559 subunit alpha K02707 psbE; photosystem II cytochrome b559 subunit alpha
D L3I90_10765 psbF; cytochrome b559 subunit beta K02708 psbF; photosystem II cytochrome b559 subunit beta
D L3I90_10770 photosystem II reaction center protein L K02713 psbL; photosystem II PsbL protein
D L3I90_10775 photosystem II reaction center protein J K02711 psbJ; photosystem II PsbJ protein
D L3I90_06200 psbH; photosystem II reaction center protein PsbH K02709 psbH; photosystem II PsbH protein
D L3I90_07350 photosystem II reaction center protein I K02710 psbI; photosystem II PsbI protein
D L3I90_00790 photosystem II reaction center protein K K02712 psbK; photosystem II PsbK protein
D L3I90_00800 photosystem II reaction center protein M K02714 psbM; photosystem II PsbM protein
D L3I90_16745 photosystem II reaction center protein T K02718 psbT; photosystem II PsbT protein
D L3I90_15675 psbZ; photosystem II reaction center protein PsbZ K02724 psbZ; photosystem II PsbZ protein
D L3I90_14385 photosystem II protein Y K02723 psbY; photosystem II PsbY protein
D L3I90_11790 psb27; photosystem II protein Psb27 K08902 psb27; photosystem II Psb27 protein
D L3I90_04590 psb28; photosystem II reaction center protein Psb28 K08903 psb28; photosystem II 13kDa protein
D L3I90_04515 photosystem II manganese-stabilizing polypeptide K02716 psbO; photosystem II oxygen-evolving enhancer protein 1
D L3I90_14245 photosystem II reaction center PsbP family protein K02717 psbP; photosystem II oxygen-evolving enhancer protein 2
D L3I90_02890 psbV; cytochrome c-550 K02720 psbV; photosystem II cytochrome c550
D L3I90_15995 psbU; photosystem II complex extrinsic protein PsbU K02719 psbU; photosystem II PsbU protein
D L3I90_05855 photosystem II reaction center X protein K02722 psbX; photosystem II PsbX protein
D L3I90_01530 psb28; photosystem II reaction center protein Psb28 K08904 psb28-2; photosystem II Psb28-2 protein
D L3I90_12435 psaA; photosystem I core protein PsaA K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D L3I90_12440 psaB; photosystem I core protein PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D L3I90_15820 psaC; photosystem I iron-sulfur center protein PsaC K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]
D L3I90_13310 photosystem I reaction center subunit II K02692 psaD; photosystem I subunit II
D L3I90_12855 photosystem I reaction center subunit IV K02693 psaE; photosystem I subunit IV
D L3I90_16485 Photosystem I reaction center subunit III K02694 psaF; photosystem I subunit III
D L3I90_01380 psaI; photosystem I reaction center subunit VIII K02696 psaI; photosystem I subunit VIII
D L3I90_16480 psaJ; photosystem I reaction center subunit IX K02697 psaJ; photosystem I subunit IX
D L3I90_11490 psaK; photosystem I reaction center subunit PsaK K02698 psaK; photosystem I subunit X
D L3I90_16475 photosystem I reaction center subunit XI K02699 psaL; photosystem I subunit XI
D L3I90_10355 photosystem I reaction center subunit XII K02700 psaM; photosystem I subunit XII
D L3I90_06095 photosystem I protein PsaX K02702 psaX; photosystem I 4.8kDa protein
D L3I90_16795 petA; apocytochrome f K02634 petA; apocytochrome f
D L3I90_10900 cytochrome b6 K02635 petB; cytochrome b6
D L3I90_13200 ubiquinol-cytochrome c reductase iron-sulfur subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D L3I90_16790 cytochrome b6-f complex iron-sulfur subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D L3I90_10905 petD; cytochrome b6-f complex subunit IV K02637 petD; cytochrome b6-f complex subunit 4
D L3I90_04405 petG; cytochrome b6-f complex subunit PetG K02640 petG; cytochrome b6-f complex subunit 5
D L3I90_16815 petL; cytochrome b6-f complex subunit PetL K02642 petL; cytochrome b6-f complex subunit 6
D L3I90_16510 cytochrome b6-f complex subunit PetM K02643 petM; cytochrome b6-f complex subunit 7
D L3I90_00735 petN; cytochrome b6-f complex subunit PetN K03689 petN; cytochrome b6-f complex subunit 8
D L3I90_02885 petE; plastocyanin K02638 petE; plastocyanin
D L3I90_03070 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin
D L3I90_03335 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin
D L3I90_03870 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin
D L3I90_15755 2Fe-2S iron-sulfur cluster-binding protein K02639 petF; ferredoxin
D L3I90_06340 FAD-binding oxidoreductase K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2]
D L3I90_02880 c-type cytochrome K08906 petJ; cytochrome c6
D L3I90_10810 c-type cytochrome K08906 petJ; cytochrome c6
D L3I90_14900 c-type cytochrome K08906 petJ; cytochrome c6
D L3I90_08655 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D L3I90_08650 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D L3I90_09765 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D L3I90_09770 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D L3I90_09775 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D L3I90_09780 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D L3I90_09785 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D L3I90_09790 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D L3I90_09795 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D L3I90_09800 ATP synthase subunit I K02116 atpI; ATP synthase protein I
D L3I90_09920 apcA; allophycocyanin subunit alpha K02092 apcA; allophycocyanin alpha subunit
D L3I90_09915 apcB; allophycocyanin subunit beta K02093 apcB; allophycocyanin beta subunit
D L3I90_09910 phycobilisome linker polypeptide K02094 apcC; phycobilisome core linker protein
D L3I90_11485 allophycocyanin K02095 apcD; allophycocyanin-B
D L3I90_09925 phycobilisome rod-core linker polypeptide K02096 apcE; phycobilisome core-membrane linker protein
D L3I90_10710 apcB; allophycocyanin subunit beta K02097 apcF; phycobilisome core component
D L3I90_11385 cpcA; phycocyanin subunit alpha K02284 cpcA; phycocyanin alpha chain
D L3I90_11380 phycocyanin subunit beta K02285 cpcB; phycocyanin beta chain
D L3I90_11390 phycobilisome linker polypeptide K02286 cpcC; phycocyanin-associated rod linker protein
D L3I90_11395 phycobilisome linker polypeptide K02287 cpcD; phycocyanin-associated, rod
D L3I90_11400 HEAT repeat domain-containing protein K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32]
D L3I90_11405 HEAT repeat domain-containing protein K02289 cpcF; phycocyanobilin lyase subunit beta [EC:4.4.1.32]
D L3I90_07555 phycobilisome rod-core linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D L3I90_11410 phycobilisome rod-core linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D L3I90_11415 phycobilisome rod-core linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D L3I90_11420 phycobilisome rod-core linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:crk03000]
D L3I90_03635 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_07360 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_04805 LysR substrate-binding domain-containing protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D L3I90_10140 sufR; iron-sulfur cluster biosynthesis transcriptional regulator SufR K09012 sufR; DeoR family transcriptional regulator, suf operon transcriptional repressor
D L3I90_11565 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D L3I90_12055 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D L3I90_01600 GntR family transcriptional regulator K07978 plmA; GntR family transcriptional regulator
D L3I90_00950 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D L3I90_01155 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D L3I90_04050 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D L3I90_10375 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D L3I90_07285 ntcA; global nitrogen regulator NtcA K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D L3I90_08960 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D L3I90_00730 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D L3I90_10030 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D L3I90_05670 pruA; L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D L3I90_02085 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D L3I90_08395 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D L3I90_05940 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D L3I90_12670 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
C 03021 Transcription machinery [BR:crk03021]
D L3I90_02665 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D L3I90_10235 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D L3I90_10225 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D L3I90_10230 DNA-directed RNA polymerase subunit gamma K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D L3I90_09005 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D L3I90_08610 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D L3I90_10815 RpoD/SigA family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D L3I90_01160 sigC; RNA polymerase sigma factor SigC K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D L3I90_10720 RNA polymerase sigma factor, RpoD/SigA family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D L3I90_14885 RNA polymerase sigma factor, RpoD/SigA family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D L3I90_06275 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D L3I90_04345 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D L3I90_13565 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D L3I90_04355 PP2C family protein-serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D L3I90_14530 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D L3I90_03015 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D L3I90_06425 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D L3I90_14590 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D L3I90_10910 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
C 03019 Messenger RNA biogenesis [BR:crk03019]
D L3I90_16720 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D L3I90_06745 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D L3I90_07000 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D L3I90_03395 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D L3I90_14680 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D L3I90_15965 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D L3I90_10680 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D L3I90_12785 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D L3I90_04650 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D L3I90_07305 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D L3I90_11230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_13915 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_06765 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_15080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_06040 hypothetical protein K03666 hfq; host factor-I protein
D L3I90_16310 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 03041 Spliceosome
C 03011 Ribosome [BR:crk03011]
D L3I90_01590 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D L3I90_06920 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D L3I90_06460 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D L3I90_02575 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D L3I90_00520 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D L3I90_02625 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D L3I90_06415 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D L3I90_16440 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D L3I90_02610 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D L3I90_02685 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D L3I90_16455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D L3I90_02660 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D L3I90_16435 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D L3I90_02655 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D L3I90_14905 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D L3I90_01755 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D L3I90_02805 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D L3I90_02590 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D L3I90_09540 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D L3I90_02565 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D L3I90_10245 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D L3I90_11275 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D L3I90_11300 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D L3I90_13555 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D L3I90_02560 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D L3I90_02545 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D L3I90_02550 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D L3I90_02605 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D L3I90_02615 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D L3I90_01125 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D L3I90_13550 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D L3I90_13560 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D L3I90_13545 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D L3I90_02680 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D L3I90_02595 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D L3I90_02630 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D L3I90_02580 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D L3I90_02670 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D L3I90_02620 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D L3I90_13580 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D L3I90_07720 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D L3I90_07090 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D L3I90_02570 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D L3I90_02555 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D L3I90_02600 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D L3I90_07095 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D L3I90_09230 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D L3I90_02585 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D L3I90_02690 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D L3I90_03380 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D L3I90_09545 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D L3I90_02935 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D L3I90_07715 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D L3I90_02650 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D L3I90_04005 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D L3I90_13875 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D L3I90_16840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D L3I90_13890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:crk03009]
D L3I90_06745 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D L3I90_07000 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D L3I90_07335 GTP-binding protein K03595 era; GTPase
D L3I90_09225 era; GTPase Era K03595 era; GTPase
D L3I90_06015 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D L3I90_06275 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D L3I90_04345 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D L3I90_13565 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D L3I90_04710 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D L3I90_06965 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D L3I90_04400 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D L3I90_12880 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D L3I90_09260 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D L3I90_07980 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D L3I90_11295 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D L3I90_15130 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D L3I90_04835 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D L3I90_10175 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D L3I90_11480 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D L3I90_11375 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D L3I90_15935 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D L3I90_11195 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D L3I90_01585 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D L3I90_15970 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D L3I90_14960 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D L3I90_16720 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D L3I90_12950 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D L3I90_04830 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D L3I90_15965 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D L3I90_02025 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D L3I90_10180 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D L3I90_00415 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D L3I90_04545 hflX; GTPase HflX K03665 hflX; GTPase
D L3I90_14430 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D L3I90_02355 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D L3I90_05615 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D L3I90_06270 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D L3I90_14490 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D L3I90_03985 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D L3I90_14695 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D L3I90_00470 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D L3I90_02960 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:crk03016]
D L3I90_13500 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D L3I90_11060 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D L3I90_05645 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D L3I90_15680 CBS domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D L3I90_02110 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D L3I90_13855 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D L3I90_15185 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D L3I90_01835 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D L3I90_00185 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D L3I90_02145 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D L3I90_12615 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D L3I90_13760 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D L3I90_11460 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D L3I90_13335 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D L3I90_03060 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D L3I90_04580 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D L3I90_03835 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D L3I90_04360 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D L3I90_10645 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D L3I90_13370 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D L3I90_06825 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D L3I90_03215 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D L3I90_02775 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D L3I90_05680 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D L3I90_02675 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D L3I90_02335 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D L3I90_01990 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_03135 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_13640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_14430 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D L3I90_08600 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D L3I90_15250 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D L3I90_05970 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D L3I90_11285 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D L3I90_02940 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D L3I90_06750 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D L3I90_13990 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D L3I90_09535 ribonuclease R K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D L3I90_15885 ribonuclease H-like domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D L3I90_15140 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D L3I90_13870 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D L3I90_07490 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D L3I90_16595 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D L3I90_09575 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D L3I90_12620 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D L3I90_01540 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D L3I90_15635 trmFO; FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D L3I90_04675 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D L3I90_06650 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D L3I90_06570 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D L3I90_06725 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D L3I90_03075 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D L3I90_09060 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D L3I90_11645 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D L3I90_10990 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D L3I90_03295 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D L3I90_09425 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D L3I90_11095 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D L3I90_11040 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D L3I90_07530 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D L3I90_14580 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D L3I90_00430 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D L3I90_12585 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D L3I90_05655 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D L3I90_16490 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D L3I90_01420 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D L3I90_14680 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D L3I90_07305 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D L3I90_04860 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:crk03012]
D L3I90_03150 translation initiation factor K03113 EIF1; translation initiation factor 1
D L3I90_06285 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D L3I90_06680 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D L3I90_02525 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D L3I90_06465 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D L3I90_16450 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D L3I90_16445 fusA; elongation factor G K02355 fusA; elongation factor G
D L3I90_02695 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D L3I90_05885 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D L3I90_01415 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D L3I90_06210 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D L3I90_02645 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D L3I90_13840 efp; elongation factor P K02356 efp; elongation factor P
D L3I90_03470 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D L3I90_04125 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:crk03110]
D L3I90_04640 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D L3I90_11315 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D L3I90_06540 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D L3I90_11190 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D L3I90_03420 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D L3I90_10215 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D L3I90_11230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_13915 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_06765 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_15080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_02035 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D L3I90_14190 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D L3I90_04285 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D L3I90_11225 J domain-containing protein K05516 cbpA; curved DNA-binding protein
D L3I90_10265 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D L3I90_01250 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D L3I90_13070 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D L3I90_15075 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D L3I90_03525 ftsH2; ATP-dependent zinc metalloprotease FtsH2 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D L3I90_07410 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D L3I90_12540 ftsH3; ATP-dependent zinc metalloprotease FtsH3 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D L3I90_13815 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D L3I90_09795 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D L3I90_09395 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D L3I90_01550 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D L3I90_15455 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D L3I90_01555 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D L3I90_15450 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D L3I90_04080 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D L3I90_13620 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D L3I90_01400 thioredoxin family protein K03671 TXN; thioredoxin
D L3I90_05805 thioredoxin K03671 TXN; thioredoxin
D L3I90_04540 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D L3I90_16620 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
C 04131 Membrane trafficking [BR:crk04131]
D L3I90_10600 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D L3I90_07930 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D L3I90_07230 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D L3I90_16025 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D L3I90_06190 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D L3I90_07255 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D L3I90_07250 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_07540 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_10565 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_10215 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:crk03051]
D L3I90_10215 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:crk03032]
D L3I90_07115 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D L3I90_03635 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_07360 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_08625 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D L3I90_01115 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D L3I90_03845 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D L3I90_02070 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_14355 trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_04225 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D L3I90_03200 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D L3I90_15620 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D L3I90_06910 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D L3I90_16725 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D L3I90_00855 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D L3I90_07655 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D L3I90_10800 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D L3I90_01305 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D L3I90_13720 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D L3I90_08605 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D L3I90_12915 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:crk03036]
D L3I90_03635 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_07360 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_06745 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D L3I90_07000 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D L3I90_08625 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D L3I90_04285 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D L3I90_11225 J domain-containing protein K05516 cbpA; curved DNA-binding protein
D L3I90_10105 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D L3I90_06040 hypothetical protein K03666 hfq; host factor-I protein
D L3I90_07430 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D L3I90_03510 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D L3I90_04070 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D L3I90_12355 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D L3I90_02380 PD-(D/E)XK nuclease family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D L3I90_04525 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D L3I90_09905 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D L3I90_04530 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D L3I90_01205 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D L3I90_14230 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D L3I90_14975 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D L3I90_09370 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D L3I90_09375 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D L3I90_09380 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D L3I90_07955 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D L3I90_11335 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D L3I90_11330 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D L3I90_02995 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D L3I90_08400 ParA family protein K03496 parA; chromosome partitioning protein
D L3I90_15560 AAA family ATPase K03496 parA; chromosome partitioning protein
D L3I90_03350 ParA family protein K03496 parA; chromosome partitioning protein
D L3I90_07435 ParA family protein K03496 parA; chromosome partitioning protein
D L3I90_08395 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D L3I90_05970 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D L3I90_09260 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D L3I90_15635 trmFO; FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D L3I90_08290 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D L3I90_03000 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D L3I90_07055 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:crk03400]
D L3I90_02095 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D L3I90_13650 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D L3I90_12490 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D L3I90_02765 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D L3I90_04615 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D L3I90_14875 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D L3I90_01325 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D L3I90_09560 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D L3I90_12850 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D L3I90_03545 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D L3I90_00225 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D L3I90_04175 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D L3I90_00855 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D L3I90_06620 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D L3I90_07440 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D L3I90_10020 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D L3I90_06155 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D L3I90_06355 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D L3I90_10235 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D L3I90_10225 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D L3I90_10230 DNA-directed RNA polymerase subunit gamma K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D L3I90_02665 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D L3I90_09005 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D L3I90_09175 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D L3I90_04465 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D L3I90_04150 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D L3I90_14165 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D L3I90_02070 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_14355 trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D L3I90_04225 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D L3I90_03200 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D L3I90_15620 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D L3I90_06910 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D L3I90_07655 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D L3I90_10800 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D L3I90_00775 recA; recombinase RecA K03553 recA; recombination protein RecA
D L3I90_01225 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D L3I90_13660 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D L3I90_01430 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D L3I90_10820 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D L3I90_03450 sbcC; exonuclease subunit SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D L3I90_00230 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D L3I90_06240 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D L3I90_06490 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D L3I90_06475 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D L3I90_04100 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D L3I90_11080 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D L3I90_02725 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D L3I90_02375 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D L3I90_00290 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D L3I90_01305 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D L3I90_13720 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D L3I90_08605 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D L3I90_12915 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D L3I90_08625 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D L3I90_10680 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D L3I90_12785 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D L3I90_12990 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D L3I90_16330 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
C 03029 Mitochondrial biogenesis [BR:crk03029]
D L3I90_06285 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D L3I90_06680 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D L3I90_06465 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D L3I90_16450 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D L3I90_16445 fusA; elongation factor G K02355 fusA; elongation factor G
D L3I90_07335 GTP-binding protein K03595 era; GTPase
D L3I90_09225 era; GTPase Era K03595 era; GTPase
D L3I90_06825 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D L3I90_01835 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D L3I90_12615 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D L3I90_02145 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D L3I90_09550 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D L3I90_12495 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D L3I90_02160 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D L3I90_16695 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D L3I90_13260 BamA/TamA family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D L3I90_11230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_13915 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_06765 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_15080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_15075 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D L3I90_02035 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D L3I90_14190 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D L3I90_01990 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_03135 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_13640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_16620 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D L3I90_03000 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D L3I90_15925 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D L3I90_15920 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D L3I90_02950 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D L3I90_10215 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:crk02000]
D L3I90_11840 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D L3I90_02400 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D L3I90_10390 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D L3I90_05040 ABC transporter ATP-binding protein/permease K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D L3I90_03785 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_13405 cysteine peptidase family C39 domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_15835 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_11750 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D L3I90_13735 type I secretion system permease/ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D L3I90_08705 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D L3I90_10630 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D L3I90_08345 ATP-binding cassette domain-containing protein K21397 K21397; ABC transport system ATP-binding/permease protein
D L3I90_08520 ATP-binding cassette domain-containing protein K21397 K21397; ABC transport system ATP-binding/permease protein
D L3I90_15165 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D L3I90_15170 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D L3I90_15175 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D L3I90_15180 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D L3I90_00450 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D L3I90_06305 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D L3I90_01460 modB; molybdate ABC transporter permease subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D L3I90_13210 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D L3I90_13215 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D L3I90_13220 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D L3I90_13225 nitrate ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D L3I90_12710 ABC transporter substrate-binding protein K11950 cmpA; bicarbonate transport system substrate-binding protein
D L3I90_12715 ntrB; nitrate ABC transporter permease K11951 cmpB; bicarbonate transport system permease protein
D L3I90_12720 nitrate ABC transporter ATP-binding protein K11952 cmpC; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D L3I90_09015 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D L3I90_09865 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D L3I90_09860 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D L3I90_01560 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D L3I90_13110 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D L3I90_01565 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D L3I90_13100 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D L3I90_01570 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D L3I90_13105 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D L3I90_02075 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D L3I90_11915 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D L3I90_14395 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D L3I90_10570 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D L3I90_06595 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein
D L3I90_09960 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D L3I90_06555 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D L3I90_05695 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D L3I90_13985 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D L3I90_06560 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D L3I90_06070 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D L3I90_02205 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D L3I90_01370 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D L3I90_08950 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_10475 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_15285 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D L3I90_10480 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D L3I90_10485 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D L3I90_06935 ATP-binding cassette domain-containing protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D L3I90_10490 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D L3I90_00245 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D L3I90_11620 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D L3I90_00255 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D L3I90_11615 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D L3I90_00250 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D L3I90_11625 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D L3I90_02290 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D L3I90_02295 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D L3I90_02300 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D L3I90_02310 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D L3I90_03440 ABC transporter substrate-binding protein K11954 natB; neutral amino acid transport system substrate-binding protein
D L3I90_04035 branched-chain amino acid ABC transporter permease K11955 natC; neutral amino acid transport system permease protein
D L3I90_06100 branched-chain amino acid ABC transporter permease K11956 natD; neutral amino acid transport system permease protein
D L3I90_15295 ABC transporter ATP-binding protein K11957 natA; neutral amino acid transport system ATP-binding protein
D L3I90_03895 ABC transporter ATP-binding protein K11958 natE; neutral amino acid transport system ATP-binding protein
D L3I90_14200 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D L3I90_14205 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein
D L3I90_14210 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D L3I90_14215 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D L3I90_14220 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D L3I90_07725 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D L3I90_04665 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D L3I90_16755 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D L3I90_10940 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D L3I90_16760 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D L3I90_05570 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D L3I90_16765 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D L3I90_08050 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D L3I90_16545 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D L3I90_02350 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D L3I90_03935 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D L3I90_03945 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D L3I90_03940 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D L3I90_11170 zinc ABC transporter substrate-binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D L3I90_12750 zinc ABC transporter substrate-binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D L3I90_12740 metal ABC transporter permease K09819 ABC.MN.P; manganese/iron transport system permease protein
D L3I90_12745 metal ABC transporter ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D L3I90_11990 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D L3I90_11985 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D L3I90_15710 energy-coupling factor transporter transmembrane protein EcfT K02008 cbiQ; cobalt/nickel transport system permease protein
D L3I90_11995 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D L3I90_15705 PDGLE domain-containing protein K02007 cbiM; cobalt/nickel transport system permease protein
D L3I90_11980 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D L3I90_15715 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D L3I90_16055 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D L3I90_10185 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D L3I90_02010 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D L3I90_09255 energy-coupling factor ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D L3I90_08595 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D L3I90_09525 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D L3I90_03590 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D L3I90_03585 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D L3I90_03170 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein
D L3I90_03165 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D L3I90_03175 Gldg family protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D L3I90_14270 devC; ABC transporter permease DevC K25169 devC; heterocyst specific transport system permease protein
D L3I90_14275 DevA family ABC transporter ATP-binding protein K25170 devA; heterocyst specific system ATP-binding protein
D L3I90_14265 HlyD family efflux transporter periplasmic adaptor subunit K25171 devB; membrane fusion protein DevB
D L3I90_14320 TolC family protein K25172 hgdD; heterocyst glycolipid deposition protein
D L3I90_11755 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D L3I90_11130 ABC-2 family transporter protein K25155 evrB; viologen exporter family transport system permease protein
D L3I90_11135 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D L3I90_11635 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D L3I90_14100 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D L3I90_16040 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D L3I90_07270 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D L3I90_11630 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D L3I90_16035 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D L3I90_01795 devC; ABC transporter permease DevC K02004 ABC.CD.P; putative ABC transport system permease protein
D L3I90_08910 devC; ABC transporter permease DevC K02004 ABC.CD.P; putative ABC transport system permease protein
D L3I90_09475 devC; ABC transporter permease DevC K02004 ABC.CD.P; putative ABC transport system permease protein
D L3I90_11700 devC; ABC transporter permease DevC K02004 ABC.CD.P; putative ABC transport system permease protein
D L3I90_13700 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D L3I90_08915 DevA family ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D L3I90_09480 DevA family ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D L3I90_11695 DevA family ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D L3I90_13695 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D L3I90_10130 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D L3I90_07475 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D L3I90_08940 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D L3I90_15960 BCD family MFS transporter K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D L3I90_13150 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D L3I90_14335 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D L3I90_08930 potassium channel protein K10716 kch; voltage-gated potassium channel
D L3I90_09400 ion transporter K10716 kch; voltage-gated potassium channel
D L3I90_12875 ammonium transporter K03320 amt; ammonium transporter, Amt family
D L3I90_10730 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D L3I90_12105 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D L3I90_11245 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D L3I90_11250 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D L3I90_14045 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D L3I90_13925 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D L3I90_14055 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D L3I90_09885 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D L3I90_09890 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D L3I90_13360 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D L3I90_03030 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D L3I90_08640 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D L3I90_03025 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D L3I90_08645 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D L3I90_06760 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D L3I90_07575 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D L3I90_03280 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D L3I90_09180 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D L3I90_13980 TolC family protein K12340 tolC; outer membrane protein
D L3I90_07265 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D L3I90_13260 BamA/TamA family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D L3I90_10575 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D L3I90_03580 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D L3I90_01735 cax; calcium/proton exchanger K07300 chaA; Ca2+:H+ antiporter
D L3I90_06035 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D L3I90_14980 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D L3I90_10980 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D L3I90_10985 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D L3I90_05725 tyrosine transporter K03834 tyrP; tyrosine-specific transport protein
D L3I90_12690 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D L3I90_00140 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D L3I90_00870 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D L3I90_12730 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D L3I90_07230 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D L3I90_16025 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D L3I90_14760 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D L3I90_14790 cation:proton antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D L3I90_14785 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D L3I90_14780 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D L3I90_14775 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D L3I90_14770 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D L3I90_06705 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D L3I90_09905 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D L3I90_07930 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D L3I90_15690 FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D L3I90_10115 SemiSWEET transporter K15383 K15383; MtN3 and saliva related transmembrane protein
D L3I90_06690 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D L3I90_03790 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_13410 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_15830 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_04095 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D L3I90_11855 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D L3I90_15730 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D L3I90_05390 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D L3I90_03065 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D L3I90_01900 IctB family putative bicarbonate transporter K18814 ictB; putative inorganic carbon (hco3(-)) transporter
C 02044 Secretion system [BR:crk02044]
D L3I90_03785 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_13405 cysteine peptidase family C39 domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_15835 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D L3I90_03790 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_13410 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_15830 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D L3I90_13980 TolC family protein K12340 tolC; outer membrane protein
D L3I90_02900 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D L3I90_05545 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D L3I90_02045 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D L3I90_02055 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D L3I90_14400 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D L3I90_14405 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D L3I90_14410 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D L3I90_02050 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D L3I90_05850 YggT family protein K02221 yggT; YggT family protein
D L3I90_16275 YggT family protein K02221 yggT; YggT family protein
D L3I90_13865 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D L3I90_09235 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D L3I90_15415 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D L3I90_13570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D L3I90_15410 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D L3I90_02705 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D L3I90_02635 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D L3I90_02800 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D L3I90_04350 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D L3I90_02950 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D L3I90_06205 TatA/E family twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D L3I90_10455 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:crk02042]
D L3I90_03280 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D L3I90_09180 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:crk02022]
D L3I90_16105 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D L3I90_16100 response regulator transcription factor K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D L3I90_07420 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D L3I90_16315 HAMP domain-containing histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D L3I90_10365 response regulator transcription factor K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D L3I90_02240 cell wall metabolism sensor histidine kinase WalK K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D L3I90_16525 response regulator transcription factor K11332 nblR; two-component system, OmpR family, response regulator NblR
D L3I90_16290 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D L3I90_11765 response regulator transcription factor K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D L3I90_06235 response regulator transcription factor K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D L3I90_16650 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D L3I90_15345 PAS domain S-box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D L3I90_11370 response regulator K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D L3I90_01145 GAF domain-containing sensor histidine kinase K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:crk02035]
D L3I90_12555 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D L3I90_15345 PAS domain S-box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D L3I90_02050 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D L3I90_11370 response regulator K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D L3I90_05545 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D L3I90_02045 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D L3I90_02055 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D L3I90_02900 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D L3I90_14410 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D L3I90_14405 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D L3I90_14400 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:crk04812]
D L3I90_11335 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D L3I90_03310 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM
D L3I90_04530 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D L3I90_09370 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D L3I90_09375 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D L3I90_09380 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D L3I90_08400 ParA family protein K03496 parA; chromosome partitioning protein
D L3I90_15560 AAA family ATPase K03496 parA; chromosome partitioning protein
D L3I90_03350 ParA family protein K03496 parA; chromosome partitioning protein
D L3I90_07435 ParA family protein K03496 parA; chromosome partitioning protein
D L3I90_08395 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:crk04147]
D L3I90_10215 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D L3I90_04650 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D L3I90_07255 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D L3I90_06805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D L3I90_07250 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_07540 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_10565 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D L3I90_04080 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D L3I90_04230 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D L3I90_06765 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_15080 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D L3I90_11230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_13915 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D L3I90_04030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D L3I90_15160 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D L3I90_16450 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D L3I90_02775 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D L3I90_12780 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D L3I90_08030 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D L3I90_02640 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D L3I90_10935 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D L3I90_04655 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D L3I90_06435 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D L3I90_15360 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D L3I90_12330 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D L3I90_10705 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D L3I90_03275 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D L3I90_09335 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D L3I90_02130 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D L3I90_00495 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D L3I90_14955 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D L3I90_06480 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D L3I90_09710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D L3I90_15355 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D L3I90_07330 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:crk02048]
D L3I90_00290 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D L3I90_00295 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D L3I90_06615 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D L3I90_01200 cas6; CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D L3I90_01195 cas5d; type I-D CRISPR-associated protein Cas5/Csc1 K19120 csc1; CRISPR-associated protein Csc1
D L3I90_01190 cas7d; type I-D CRISPR-associated protein Cas7/Csc2 K19121 csc2; CRISPR-associated protein Csc2
D L3I90_00280 CRISPR-associated protein Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2
D L3I90_00315 type III-B CRISPR-associated protein Cas10/Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2
D L3I90_00275 type III-B CRISPR module-associated protein Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D L3I90_00320 type III-B CRISPR module-associated protein Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D L3I90_00325 cmr4; type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D L3I90_00270 cmr4; type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D L3I90_00335 RAMP superfamily CRISPR-associated protein K19142 cmr6; CRISPR-associated protein Cmr6
D L3I90_00260 hypothetical protein K19142 cmr6; CRISPR-associated protein Cmr6
D L3I90_16185 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D L3I90_16195 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D L3I90_07655 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D L3I90_10800 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D L3I90_10010 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D L3I90_01295 yhdJ; adenine-specific DNA-methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D L3I90_00615 site-specific DNA-methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D L3I90_03635 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_07360 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D L3I90_00745 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D L3I90_09165 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D L3I90_10030 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D L3I90_04860 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D L3I90_05505 type II toxin-antitoxin system VapC family toxin K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D L3I90_04530 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D L3I90_11335 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D L3I90_02110 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D L3I90_01990 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_03135 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_13640 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D L3I90_13135 dndC; DNA phosphorothioation system sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC
D L3I90_13120 AAA family ATPase K19171 dndD; DNA sulfur modification protein DndD
D L3I90_13140 dndD; DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD
D L3I90_13145 dndE; DNA sulfur modification protein DndE K19172 dndE; DNA sulfur modification protein DndE
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:crk01504]
D L3I90_01535 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D L3I90_00905 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D L3I90_14005 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D L3I90_13980 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:crk03100]
D L3I90_02470 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D L3I90_15010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D L3I90_13885 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D L3I90_16850 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D L3I90_15630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D L3I90_14515 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D L3I90_01340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D L3I90_03915 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D L3I90_02020 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D L3I90_02105 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D L3I90_00915 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D L3I90_15195 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D L3I90_02865 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D L3I90_16770 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D L3I90_15665 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D L3I90_12360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D L3I90_11345 tRNA-His K14226 tRNA-His; tRNA His
D L3I90_13880 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D L3I90_16845 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D L3I90_12605 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D L3I90_06575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D L3I90_05840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D L3I90_16530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D L3I90_06380 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D L3I90_14240 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D L3I90_03260 tRNA-Met K14230 tRNA-Met; tRNA Met
D L3I90_06660 tRNA-Met K14230 tRNA-Met; tRNA Met
D L3I90_03955 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D L3I90_08995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D L3I90_16505 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D L3I90_10165 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D L3I90_16090 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D L3I90_03865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D L3I90_13860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D L3I90_01375 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D L3I90_12980 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D L3I90_07145 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D L3I90_14910 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D L3I90_13575 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D L3I90_14915 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D L3I90_12295 tRNA-Val K14237 tRNA-Val; tRNA Val
D L3I90_14445 tRNA-Val K14237 tRNA-Val; tRNA Val
D L3I90_13875 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D L3I90_16840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D L3I90_13890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D L3I90_06750 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D L3I90_15240 NAD-dependent epimerase/dehydratase family protein K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D L3I90_01360 long-chain acyl-[acyl-carrier-protein] reductase K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D L3I90_08945 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D L3I90_06865 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D L3I90_01480 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D L3I90_10655 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D L3I90_03570 ferredoxin--nitrite reductase K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2]
D L3I90_07470 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D L3I90_12800 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D L3I90_13645 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D L3I90_16535 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D L3I90_10380 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D L3I90_11655 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D L3I90_08825 Ni/Fe hydrogenase subunit alpha K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2]
D L3I90_08835 oxidoreductase K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2]
D L3I90_15875 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D L3I90_03560 carotenoid oxygenase family protein K00464 diox1; all-trans-8'-apo-beta-carotenal 15,15'-oxygenase [EC:1.13.11.75]
D L3I90_06320 acyl-CoA desaturase K23054 desC; sn-1 stearoyl-lipid 9-desaturase [EC:1.14.19.28]
D L3I90_09280 radical SAM protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D L3I90_15260 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D L3I90_05220 TylF/MycF family methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D L3I90_01285 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D L3I90_14735 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D L3I90_15310 pgmB; beta-phosphoglucomutase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D L3I90_03565 glycosyltransferase family 1 protein K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D L3I90_08775 glycosyltransferase K22721 CSG1; inositol phosphorylceramide mannosyltransferase catalytic subunit [EC:2.4.1.370]
D L3I90_14830 speY; deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D L3I90_04660 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D L3I90_03235 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D L3I90_04015 SEC59/DGK1/VTE5 family protein K18678 VTE5; phytol kinase [EC:2.7.1.182]
D L3I90_03290 reverse transcriptase N-terminal domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D L3I90_05555 reverse transcriptase N-terminal domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D L3I90_16805 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D L3I90_16345 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D L3I90_12940 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D L3I90_01635 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D L3I90_10240 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D L3I90_03875 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D L3I90_07630 NADAR domain-containing protein K09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-]
D L3I90_06980 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D L3I90_14745 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D L3I90_16410 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D L3I90_11740 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D L3I90_05145 PIG-L family deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D L3I90_02415 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D L3I90_07645 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D L3I90_01365 aldehyde oxygenase (deformylating) K14331 K14331; fatty aldehyde decarbonylase [EC:4.1.99.5]
D L3I90_06715 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D L3I90_06110 larE; ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D L3I90_05635 larC; nickel pincer cofactor biosynthesis protein LarC K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D L3I90_13835 peptidylprolyl isomerase K27682 CYP38; peptidylprolyl isomerase (cyclophilin 38) [EC:5.2.1.8]
D L3I90_04685 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D L3I90_11775 acetate--CoA ligase family protein K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D L3I90_02990 NAD(P)H dehydrogenase subunit NdhS K00345 ndhS; NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [EC:7.1.1.-]
D L3I90_04560 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D L3I90_06495 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D L3I90_12325 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D L3I90_04775 carbon dioxide-concentrating mechanism protein CcmK K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK
D L3I90_04780 carbon dioxide-concentrating mechanism protein CcmK K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK
D L3I90_04785 EutN/CcmL family microcompartment protein K08697 ccmL; carbon dioxide concentrating mechanism protein CcmL
D L3I90_04790 ribulose bisphosphate carboxylase small subunit K08698 ccmM; carbon dioxide concentrating mechanism protein CcmM
D L3I90_04795 transferase K08699 ccmN; carbon dioxide concentrating mechanism protein CcmN
D L3I90_04800 BMC domain-containing protein K08700 ccmO; carbon dioxide concentrating mechanism protein CcmO
C 99982 Energy metabolism
D L3I90_01520 ferredoxin K05337 fer; ferredoxin
D L3I90_03130 nifU; Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein
D L3I90_07945 PipX family protein K14518 pipX; PII interaction protein X
D L3I90_03100 nifX; nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX
D L3I90_01680 nifT; putative nitrogen fixation protein NifT K02593 nifT; nitrogen fixation protein NifT
D L3I90_01675 nitrogen fixation protein NifZ K02597 nifZ; nitrogen fixation protein NifZ
D L3I90_03145 nifB; nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D L3I90_03105 nifN; nitrogenase iron-molybdenum cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D L3I90_03110 nifE; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D L3I90_03085 nifW; nitrogenase-stabilizing/protective protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D L3I90_13785 aminotransferase class V-fold PLP-dependent enzyme K11325 K11325; L-cysteine/cystine lyase
D L3I90_07950 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D L3I90_01875 lysylphosphatidylglycerol synthase domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D L3I90_15780 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
C 99988 Secondary metabolism
C 99999 Others
D L3I90_00360 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
D L3I90_15280 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D L3I90_11125 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
D L3I90_16465 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
C 99975 Protein processing
D L3I90_12640 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D L3I90_16705 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D L3I90_03410 tig; trigger factor K03545 tig; trigger factor
D L3I90_03860 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D L3I90_03855 urease accessory protein UreF K03188 ureF; urease accessory protein
D L3I90_03850 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D L3I90_03355 urease accessory protein UreD K03190 ureD; urease accessory protein
D L3I90_01890 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D L3I90_15470 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D L3I90_15465 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D L3I90_15460 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D L3I90_15585 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D L3I90_02770 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D L3I90_06695 cytochrome c biogenesis protein K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D L3I90_14140 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase
D L3I90_09530 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D L3I90_11455 YraN family protein K07460 yraN; putative endonuclease
D L3I90_08245 transposase K07491 rayT; REP-associated tyrosine transposase
D L3I90_08365 transposase K07491 rayT; REP-associated tyrosine transposase
D L3I90_08505 transposase K07491 rayT; REP-associated tyrosine transposase
D L3I90_08530 transposase K07491 rayT; REP-associated tyrosine transposase
D L3I90_09270 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D L3I90_13450 transposase K07491 rayT; REP-associated tyrosine transposase
D L3I90_06610 transposase K07496 K07496; putative transposase
D L3I90_15070 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D L3I90_05810 PspA/IM30 family protein K03969 pspA; phage shock protein A
D L3I90_07890 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D L3I90_00875 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D L3I90_01965 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D L3I90_00535 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D L3I90_14765 DUF4040 domain-containing protein K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B
C 99978 Cell growth
D L3I90_02955 RNA-binding protein K06346 jag; spoIIIJ-associated protein
D L3I90_05115 glycosyltransferase family protein K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
C 99993 Cell motility
C 99995 Signaling proteins
D L3I90_13075 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D L3I90_02815 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D L3I90_14305 circadian clock protein KaiA K08480 kaiA; circadian clock protein KaiA
D L3I90_14310 kaiB; circadian clock protein KaiB K08481 kaiB; circadian clock protein KaiB
D L3I90_15045 circadian clock KaiB family protein K08481 kaiB; circadian clock protein KaiB
D L3I90_14315 kaiC; circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D L3I90_12100 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D L3I90_03530 HlyD family secretion protein K02022 ABC.MR.TX; HlyD family secretion protein
D L3I90_13480 HlyD family secretion protein K02022 ABC.MR.TX; HlyD family secretion protein
D L3I90_01790 ABC exporter membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D L3I90_08905 ABC exporter membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D L3I90_09470 ABC exporter membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D L3I90_11705 ABC exporter membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D L3I90_13705 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D L3I90_07165 gvpA; gas vesicle structural protein GvpA K23262 gvpA; gas vesicle structural protein
D L3I90_07170 gvpA; gas vesicle structural protein GvpA K23262 gvpA; gas vesicle structural protein
D L3I90_07175 gvpA; gas vesicle structural protein GvpA K23262 gvpA; gas vesicle structural protein
D L3I90_07180 gvpA; gas vesicle structural protein GvpA K23262 gvpA; gas vesicle structural protein
D L3I90_07185 gvpA; gas vesicle structural protein GvpA K23262 gvpA; gas vesicle structural protein
C 99994 Others
D L3I90_16110 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D L3I90_09955 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D L3I90_12020 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D L3I90_03675 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D L3I90_11730 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D L3I90_10135 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D L3I90_10125 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D L3I90_08880 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D L3I90_11495 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D L3I90_07935 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D L3I90_08680 TIGR01548 family HAD-type hydrolase K11777 K11777; HAD superfamily phosphatase
D L3I90_06195 psbN; photosystem II reaction center protein PsbN K02715 psbN; PsbN protein
D L3I90_09135 phage holin family protein K08972 K08972; putative membrane protein
D L3I90_11650 DUF2214 family protein K08983 K08983; putative membrane protein
C 99997 Function unknown
D L3I90_14610 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D L3I90_03195 TPM domain-containing protein K06872 K06872; uncharacterized protein
D L3I90_12090 phosphotransacetylase family protein K06873 K06873; uncharacterized protein
D L3I90_05530 GTP-binding protein K06883 K06883; uncharacterized protein
D L3I90_06225 DUF697 domain-containing protein K06883 K06883; uncharacterized protein
D L3I90_07370 GTP-binding protein K06883 K06883; uncharacterized protein
D L3I90_02100 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D L3I90_03465 Bax inhibitor-1 family protein K06890 K06890; uncharacterized protein
D L3I90_09845 ATP-binding protein K06923 K06923; uncharacterized protein
D L3I90_00215 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D L3I90_04910 50S ribosome-binding GTPase K06946 K06946; uncharacterized protein
D L3I90_02810 KH domain-containing protein K06960 K06960; uncharacterized protein
D L3I90_02015 NYN domain-containing protein K06962 K06962; uncharacterized protein
D L3I90_15975 BtpA/SgcQ family protein K06971 K06971; uncharacterized protein
D L3I90_07595 VOC family protein K06991 K06991; uncharacterized protein
D L3I90_04000 AAA family ATPase K07028 K07028; uncharacterized protein
D L3I90_08235 type II toxin-antitoxin system VapC family toxin K07065 K07065; uncharacterized protein
D L3I90_09075 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D L3I90_00635 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D L3I90_10040 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D L3I90_00710 aldo/keto reductase K07079 K07079; uncharacterized protein
D L3I90_09185 aldo/keto reductase K07079 K07079; uncharacterized protein
D L3I90_02450 permease K07089 K07089; uncharacterized protein
D L3I90_14080 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D L3I90_16550 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D L3I90_16555 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D L3I90_16565 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D L3I90_14000 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D L3I90_00715 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D L3I90_11155 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D L3I90_01645 UPF0182 family protein K09118 K09118; uncharacterized protein
D L3I90_01490 DUF790 family protein K09744 K09744; uncharacterized protein
D L3I90_03575 DUF309 domain-containing protein K09763 K09763; uncharacterized protein
D L3I90_04435 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D L3I90_13375 YciI family protein K09780 K09780; uncharacterized protein
D L3I90_10200 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D L3I90_16170 DUF456 family protein K09793 K09793; uncharacterized protein
D L3I90_12840 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D L3I90_01725 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D L3I90_03185 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D L3I90_03270 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D L3I90_02820 DUF4912 domain-containing protein K09942 K09942; uncharacterized protein
D L3I90_06280 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024