+D	GENES	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a> &nbsp; KEGG Orthology (KO) - Comamonas serinivorans </h2>
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A09100 Metabolism
B
B  09101 Carbohydrate metabolism
C    00010 Glycolysis / Gluconeogenesis [PATH:cser00010]
D      CCO03_17505 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      CCO03_15025 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      CCO03_14940 fructose-bisphosphatase class I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      CCO03_00975 fructose bisphosphate aldolase	K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      CCO03_04980 triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      CCO03_00035 type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      CCO03_18395 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      CCO03_15370 gpmA; phosphoglyceromutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      CCO03_16135 histidine phosphatase family protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      CCO03_11165 phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      CCO03_00970 pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      CCO03_09410 phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      CCO03_08255 pyruvate dehydrogenase (acetyl-transferring), homodimeric type	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      CCO03_08260 dihydrolipoyllysine-residue acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_14280 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_01400 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_05850 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_07260 hypothetical protein	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_02940 aldehyde dehydrogenase	K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D      CCO03_12400 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_15840 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_05900 6-carboxyhexanoate--CoA ligase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      CCO03_07115 hypothetical protein	K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D      CCO03_01230 phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C    00020 Citrate cycle (TCA cycle) [PATH:cser00020]
D      CCO03_12970 citrate (Si)-synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      CCO03_15180 hypothetical protein	K01647 CS; citrate synthase [EC:2.3.3.1]
D      CCO03_14095 acnA; aconitate hydratase	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      CCO03_12920 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      CCO03_13890 NADP-dependent isocitrate dehydrogenase	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      CCO03_06255 dihydrolipoamide succinyltransferase	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_00295 succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      CCO03_00290 succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      CCO03_00060 propionyl-CoA--succinate CoA transferase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      CCO03_12955 succinate dehydrogenase flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      CCO03_12960 sdhB; succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      CCO03_12945 succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      CCO03_12950 succinate dehydrogenase, hydrophobic membrane anchor protein	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      CCO03_10530 fumarate hydratase	K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D      CCO03_11055 fumarate hydratase, class II	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      CCO03_12935 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      CCO03_05880 pyruvate carboxylase	K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D      CCO03_01230 phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D      CCO03_08255 pyruvate dehydrogenase (acetyl-transferring), homodimeric type	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      CCO03_08260 dihydrolipoyllysine-residue acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C    00030 Pentose phosphate pathway [PATH:cser00030]
D      CCO03_17505 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      CCO03_02555 ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      CCO03_01205 transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      CCO03_17510 transaldolase	K00616 TALDO1; transaldolase [EC:2.2.1.2]
D      CCO03_06155 ribose 5-phosphate isomerase A	K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D      CCO03_04105 hypothetical protein	K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D      CCO03_04950 hypothetical protein	K00852 rbsK; ribokinase [EC:2.7.1.15]
D      CCO03_16545 ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      CCO03_14375 GMC family oxidoreductase	K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D      CCO03_14370 gluconate 2-dehydrogenase	K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D      CCO03_09580 D-glycerate dehydrogenase	K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D      CCO03_07920 hypothetical protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      CCO03_00975 fructose bisphosphate aldolase	K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      CCO03_14940 fructose-bisphosphatase class I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      CCO03_15025 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C    00040 Pentose and glucuronate interconversions [PATH:cser00040]
D      CCO03_04665 UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      CCO03_06060 UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      CCO03_02555 ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C    00051 Fructose and mannose metabolism [PATH:cser00051]
D      CCO03_02160 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      CCO03_05145 phosphomannomutase/phosphoglucomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      CCO03_02135 GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      CCO03_17805 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D      CCO03_15025 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      CCO03_14940 fructose-bisphosphatase class I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      CCO03_00975 fructose bisphosphate aldolase	K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      CCO03_04980 triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      CCO03_02130 GDP-mannose 4,6 dehydratase	K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D      CCO03_01085 PTS fructose transporter subunit IIA	K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C    00052 Galactose metabolism [PATH:cser00052]
D      CCO03_06060 UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      CCO03_15025 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C    00053 Ascorbate and aldarate metabolism [PATH:cser00053]
D      CCO03_04665 UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      CCO03_04660 capsular biosynthesis protein CpsI	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00500 Starch and sucrose metabolism [PATH:cser00500]
D      CCO03_06060 UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      CCO03_17505 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C    00520 Amino sugar and nucleotide sugar metabolism [PATH:cser00520]
D      CCO03_06125 beta-N-acetylhexosaminidase	K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D      CCO03_05270 glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      CCO03_10125 phosphoglucosamine mutase	K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D      CCO03_17420 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D      CCO03_18255 anhydro-N-acetylmuramic acid kinase	K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D      CCO03_17185 phosphoglycolate phosphatase	K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D      CCO03_02360 aminoglycoside phosphotransferase	K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D      CCO03_01615 nucleotidyltransferase	K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D      CCO03_03655 UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      CCO03_17430 UDP-N-acetylenolpyruvoylglucosamine reductase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      CCO03_11905 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      CCO03_06555 oxidoreductase	K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D      CCO03_07800 aminotransferase DegT	K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D      CCO03_05380 N-acetyltransferase	K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D      CCO03_05600 nucleotide sugar dehydrogenase	K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D      CCO03_06060 UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      CCO03_04665 UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      CCO03_04660 capsular biosynthesis protein CpsI	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D      CCO03_01085 PTS fructose transporter subunit IIA	K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D      CCO03_17505 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      CCO03_05145 phosphomannomutase/phosphoglucomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      CCO03_02160 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      CCO03_02135 GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      CCO03_02130 GDP-mannose 4,6 dehydratase	K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D      CCO03_11020 CDP-6-deoxy-delta-3,4-glucoseen reductase	K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C    00620 Pyruvate metabolism [PATH:cser00620]
D      CCO03_12400 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_15840 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_08255 pyruvate dehydrogenase (acetyl-transferring), homodimeric type	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      CCO03_08260 dihydrolipoyllysine-residue acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_07260 hypothetical protein	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      CCO03_14280 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_01400 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_05850 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_00970 pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      CCO03_07215 acetyl-CoA carboxylase carboxyl transferase subunit alpha	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      CCO03_15755 acetyl-CoA carboxylase, biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      CCO03_15750 acetyl-CoA carboxylase biotin carboxylase subunit	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      CCO03_14325 acetyl-CoA carboxylase, carboxyltransferase subunit beta	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      CCO03_13325 acetyl/propionyl-CoA carboxylase subunit alpha	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_02940 aldehyde dehydrogenase	K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D      CCO03_00060 propionyl-CoA--succinate CoA transferase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      CCO03_05900 6-carboxyhexanoate--CoA ligase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      CCO03_11755 lldD; alpha-hydroxy-acid oxidizing enzyme	K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D      CCO03_04090 alpha-hydroxy-acid oxidizing enzyme	K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D      CCO03_01410 2-hydroxy-acid oxidase	K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D      CCO03_08235 lactoylglutathione lyase	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      CCO03_12755 lactoylglutathione lyase	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      CCO03_09760 hydroxyacylglutathione hydrolase	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      CCO03_18995 hypothetical protein	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      CCO03_09580 D-glycerate dehydrogenase	K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D      CCO03_01145 NADP-dependent malic enzyme	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D      CCO03_07325 NADP-dependent malic enzyme	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D      CCO03_05880 pyruvate carboxylase	K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D      CCO03_12935 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      CCO03_10530 fumarate hydratase	K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D      CCO03_11055 fumarate hydratase, class II	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      CCO03_01230 phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D      CCO03_09410 phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      CCO03_01190 malate synthase G	K01638 aceB; malate synthase [EC:2.3.3.9]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12655 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D      CCO03_12660 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00630 Glyoxylate and dicarboxylate metabolism [PATH:cser00630]
D      CCO03_05480 isocitrate lyase	K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D      CCO03_12400 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_15840 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_01190 malate synthase G	K01638 aceB; malate synthase [EC:2.3.3.9]
D      CCO03_12935 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      CCO03_12970 citrate (Si)-synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      CCO03_15180 hypothetical protein	K01647 CS; citrate synthase [EC:2.3.3.1]
D      CCO03_14095 acnA; aconitate hydratase	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      CCO03_12920 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09650 beta-ketoacyl-ACP reductase	K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D      CCO03_10480 (R)-hydratase	K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D      CCO03_08225 acetyl/propionyl-CoA carboxylase subunit alpha	K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D      CCO03_08210 methylmalonyl-CoA carboxyltransferase	K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D      CCO03_13325 acetyl/propionyl-CoA carboxylase subunit alpha	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      CCO03_08200 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      CCO03_14635 catalase	K03781 katE; catalase [EC:1.11.1.6]
D      CCO03_09580 D-glycerate dehydrogenase	K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D      CCO03_02665 phosphoglycolate phosphatase	K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D      CCO03_15070 HAD family hydrolase	K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D      CCO03_04905 type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      CCO03_11360 glyA; serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      CCO03_07655 glycine dehydrogenase (aminomethyl-transferring)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      CCO03_07675 gcvT; glycine cleavage system protein T	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_07670 glycine cleavage system protein H	K02437 gcvH; glycine cleavage system H protein
D      CCO03_03080 glycerate kinase	K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D      CCO03_07920 hypothetical protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      CCO03_07930 tartrate dehydrogenase	K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D      CCO03_09260 esterase	K01432 AFMID; arylformamidase [EC:3.5.1.9]
D      CCO03_04770 formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      CCO03_01845 formamidase	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C    00640 Propanoate metabolism [PATH:cser00640]
D      CCO03_12400 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_15840 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_00440 propionate--CoA ligase	K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D      CCO03_05900 6-carboxyhexanoate--CoA ligase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_15145 acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      CCO03_08110 alcohol dehydrogenase	K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D      CCO03_07255 alcohol dehydrogenase	K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_07215 acetyl-CoA carboxylase carboxyl transferase subunit alpha	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      CCO03_15755 acetyl-CoA carboxylase, biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      CCO03_15750 acetyl-CoA carboxylase biotin carboxylase subunit	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      CCO03_14325 acetyl-CoA carboxylase, carboxyltransferase subunit beta	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      CCO03_13325 acetyl/propionyl-CoA carboxylase subunit alpha	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      CCO03_11005 malonyl-CoA decarboxylase	K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D      CCO03_18770 aspartate aminotransferase family protein	K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D      CCO03_08225 acetyl/propionyl-CoA carboxylase subunit alpha	K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D      CCO03_08210 methylmalonyl-CoA carboxyltransferase	K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D      CCO03_08200 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      CCO03_00290 succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      CCO03_00295 succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      CCO03_00940 methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      CCO03_11960 methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      CCO03_12920 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C    00650 Butanoate metabolism [PATH:cser00650]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07980 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      CCO03_18745 3-hydroxybutyryl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      CCO03_05490 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      CCO03_18035 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_09630 enoyl-CoA hydratase	K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_15145 acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      CCO03_10480 (R)-hydratase	K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D      CCO03_09640 class I poly(R)-hydroxyalkanoic acid synthase	K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D      CCO03_12775 polyhydroxyalkanoate depolymerase	K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D      CCO03_09650 beta-ketoacyl-ACP reductase	K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D      CCO03_07930 tartrate dehydrogenase	K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D      CCO03_12955 succinate dehydrogenase flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      CCO03_12960 sdhB; succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      CCO03_12945 succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      CCO03_12950 succinate dehydrogenase, hydrophobic membrane anchor protein	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      CCO03_16340 NAD-dependent succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      CCO03_00060 propionyl-CoA--succinate CoA transferase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      CCO03_12395 4-hydroxybutyrate dehydrogenase	K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D      CCO03_05975 hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      CCO03_14650 succinyl-CoA--3-ketoacid-CoA transferase	K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D      CCO03_14655 succinyl-CoA--3-ketoacid-CoA transferase	K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D      CCO03_14195 3-hydroxybutyrate dehydrogenase	K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D      CCO03_12680 acetolactate synthase, large subunit, biosynthetic type	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_04115 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_09635 acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_06630 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_12675 acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      CCO03_18620 3-oxoacyl-ACP reductase	K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C    00660 C5-Branched dibasic acid metabolism [PATH:cser00660]
D      CCO03_12680 acetolactate synthase, large subunit, biosynthetic type	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_04115 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_09635 acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_06630 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_12675 acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      CCO03_14430 CoA transferase	K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D      CCO03_00290 succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      CCO03_00295 succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      CCO03_12625 3-isopropylmalate dehydratase large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      CCO03_12645 3-isopropylmalate dehydratase small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      CCO03_12585 3-isopropylmalate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C    00562 Inositol phosphate metabolism [PATH:cser00562]
D      CCO03_14455 inositol monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      CCO03_00940 methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      CCO03_11960 methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      CCO03_04980 triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B  09102 Energy metabolism
C    00190 Oxidative phosphorylation [PATH:cser00190]
D      CCO03_04995 NADH-quinone oxidoreductase subunit A	K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D      CCO03_05000 NADH-quinone oxidoreductase subunit B	K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D      CCO03_05005 NADH-quinone oxidoreductase subunit C	K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D      CCO03_05010 NADH-quinone oxidoreductase subunit D	K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D      CCO03_05015 NADH-quinone oxidoreductase subunit E	K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D      CCO03_05020 NADH-quinone oxidoreductase subunit F	K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D      CCO03_05025 NADH-quinone oxidoreductase subunit G	K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D      CCO03_05030 NADH-quinone oxidoreductase subunit H	K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D      CCO03_05035 NADH-quinone oxidoreductase subunit I	K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D      CCO03_05040 NADH:ubiquinone oxidoreductase subunit J	K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D      CCO03_05045 NADH-quinone oxidoreductase subunit K	K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D      CCO03_05050 NADH-quinone oxidoreductase subunit L	K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D      CCO03_05055 NADH-quinone oxidoreductase subunit M	K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D      CCO03_05060 NADH-quinone oxidoreductase subunit N	K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D      CCO03_14640 FAD-dependent oxidoreductase	K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      CCO03_12955 succinate dehydrogenase flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      CCO03_12960 sdhB; succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      CCO03_12945 succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      CCO03_12950 succinate dehydrogenase, hydrophobic membrane anchor protein	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      CCO03_15890 ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D      CCO03_15885 cytochrome b	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      CCO03_15880 cytochrome c1	K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D      CCO03_05780 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      CCO03_12230 cytochrome o ubiquinol oxidase subunit IV	K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D      CCO03_05755 cytochrome c oxidase subunit 3	K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D      CCO03_05740 cytochrome c oxidase subunit I	K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D      CCO03_05735 cytochrome c oxidase subunit II	K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D      CCO03_05745 cytochrome c oxidase assembly protein	K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D      CCO03_05775 heme A synthase	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      CCO03_12235 cytochrome o ubiquinol oxidase subunit III	K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D      CCO03_12240 cytochrome o ubiquinol oxidase subunit I	K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D      CCO03_12245 ubiquinol oxidase subunit II	K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D      CCO03_13270 cytochrome d terminal oxidase subunit 1	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      CCO03_13275 cytochrome d ubiquinol oxidase subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      CCO03_13280 cytochrome bd-I oxidase subunit CydX	K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D      CCO03_11000 cytochrome C'	K08738 CYC; cytochrome c
D      CCO03_02410 F0F1 ATP synthase subunit alpha	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      CCO03_02420 F0F1 ATP synthase subunit beta	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      CCO03_02415 F0F1 ATP synthase subunit gamma	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      CCO03_02405 F0F1 ATP synthase subunit delta	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      CCO03_02425 F0F1 ATP synthase subunit epsilon	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      CCO03_02390 F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      CCO03_02400 F0F1 ATP synthase subunit B	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      CCO03_02395 F0F1 ATP synthase subunit C	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      CCO03_12995 inorganic pyrophosphatase	K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D      CCO03_12315 polyphosphate kinase 2	K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C    00195 Photosynthesis
C    00196 Photosynthesis - antenna proteins
C    00710 Carbon fixation in photosynthetic organisms
C    00720 Carbon fixation pathways in prokaryotes
C    00680 Methane metabolism [PATH:cser00680]
D      CCO03_14280 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_01400 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_05850 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_04050 S-formylglutathione hydrolase	K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D      CCO03_11360 glyA; serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      CCO03_07920 hypothetical protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      CCO03_11165 phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      CCO03_12935 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      CCO03_00975 fructose bisphosphate aldolase	K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      CCO03_14940 fructose-bisphosphatase class I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      CCO03_15025 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      CCO03_04105 hypothetical protein	K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D      CCO03_12400 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_15840 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_09410 phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      CCO03_15370 gpmA; phosphoglyceromutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      CCO03_16135 histidine phosphatase family protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      CCO03_07465 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      CCO03_12975 3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      CCO03_17210 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      CCO03_07855 phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C    00910 Nitrogen metabolism [PATH:cser00910]
D      CCO03_01845 formamidase	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D      CCO03_05365 MFS transporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      CCO03_10410 nitrite reductase (NAD(P)H)	K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D      CCO03_10405 nitrite reductase (NAD(P)H) small subunit	K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D      CCO03_13470 2-nitropropane dioxygenase	K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D      CCO03_00430 2-nitropropane dioxygenase	K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D      CCO03_09445 nitronate monooxygenase	K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D      CCO03_00610 glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      CCO03_10250 glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      CCO03_04905 type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      CCO03_03590 glutamate synthase subunit alpha	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      CCO03_03595 gltD; glutamate synthase	K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D      CCO03_18700 carbonate dehydratase	K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C    00920 Sulfur metabolism [PATH:cser00920]
D      CCO03_16605 thiosulfate transporter subunit	K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D      CCO03_07150 sulfate transporter subunit	K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D      CCO03_16600 sulfate ABC transporter permease subunit CysT	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      CCO03_16595 sulfate ABC transporter permease subunit CysW	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      CCO03_16590 sulfate ABC transporter ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      CCO03_16085 ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      CCO03_16090 sulfonate ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      CCO03_16095 hypothetical protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      CCO03_16105 alkanesulfonate monooxygenase	K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D      CCO03_16115 FMN reductase (NADPH)	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      CCO03_12495 sulfate adenylyltransferase	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      CCO03_12490 sulfate adenylyltransferase small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      CCO03_12485 phosphoadenylylsulfate reductase	K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D      CCO03_11860 hypothetical protein	K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D      CCO03_05355 reductase	K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D      CCO03_12475 nitrite reductase	K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D      CCO03_07820 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      CCO03_11415 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      CCO03_05520 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      CCO03_07165 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      CCO03_03525 cysteine synthase A	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      CCO03_00225 homoserine O-acetyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      CCO03_15110 O-succinylhomoserine sulfhydrylase	K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D      CCO03_05485 long-chain fatty acid--CoA ligase	K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D      CCO03_11635 long-chain fatty acid--CoA ligase	K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D      CCO03_08150 acyl-CoA synthetase	K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D      CCO03_09095 acyl-CoA dehydrogenase	K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D      CCO03_18045 acyl-CoA dehydrogenase	K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B  09103 Lipid metabolism
C    00061 Fatty acid biosynthesis [PATH:cser00061]
D      CCO03_07215 acetyl-CoA carboxylase carboxyl transferase subunit alpha	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      CCO03_15755 acetyl-CoA carboxylase, biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      CCO03_15750 acetyl-CoA carboxylase biotin carboxylase subunit	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      CCO03_14325 acetyl-CoA carboxylase, carboxyltransferase subunit beta	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      CCO03_13325 acetyl/propionyl-CoA carboxylase subunit alpha	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      CCO03_03340 acyl carrier protein	K02078 acpP; acyl carrier protein
D      CCO03_13975 acyl carrier protein	K02078 acpP; acyl carrier protein
D      CCO03_13195 phosphopantetheine-binding protein	K02078 acpP; acyl carrier protein
D      CCO03_11090 hypothetical protein	K02078 acpP; acyl carrier protein
D      CCO03_03330 [acyl-carrier-protein] S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      CCO03_03325 3-oxoacyl-ACP synthase	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      CCO03_00960 beta-ketoacyl-[acyl-carrier-protein] synthase I	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      CCO03_10080 beta-ketoacyl-[acyl-carrier-protein] synthase II	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      CCO03_03345 beta-ketoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      CCO03_13190 beta-ketoacyl synthase	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      CCO03_03335 fabG; 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_04440 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_00365 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_05230 oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_09895 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_10095 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_01405 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_06795 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_00965 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA	K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D      CCO03_14790 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      CCO03_10485 hypothetical protein	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      CCO03_12285 enoyl-[acyl-carrier-protein] reductase	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      CCO03_13450 hypothetical protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09485 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_12060 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_06145 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_03865 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09225 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C    00062 Fatty acid elongation
C    00071 Fatty acid degradation [PATH:cser00071]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18025 acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_05490 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      CCO03_18035 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      CCO03_15145 acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      CCO03_02995 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_03870 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_18280 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_09890 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_14435 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_19140 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_01250 hypothetical protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_05940 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_11520 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_12185 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_13095 hypothetical protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_14470 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_01255 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_09220 acyl-CoA dehydrogenase	K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D      CCO03_11650 acyl-CoA dehydrogenase	K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D      CCO03_05650 acyl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      CCO03_13450 hypothetical protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09485 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_12060 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_06145 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_03865 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09225 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_02725 pyridine nucleotide-disulfide oxidoreductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      CCO03_14280 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_01400 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_05850 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_07260 hypothetical protein	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00073 Cutin, suberine and wax biosynthesis
C    00100 Steroid biosynthesis
C    00120 Primary bile acid biosynthesis
C    00121 Secondary bile acid biosynthesis
C    00140 Steroid hormone biosynthesis
C    00561 Glycerolipid metabolism [PATH:cser00561]
D      CCO03_03080 glycerate kinase	K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D      CCO03_07920 hypothetical protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_18510 glycerol kinase	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      CCO03_03320 phosphate acyltransferase	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      CCO03_03025 glycerol-3-phosphate acyltransferase	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      CCO03_07430 hypothetical protein	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      CCO03_02290 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      CCO03_12735 diacylglycerol kinase	K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C    00564 Glycerophospholipid metabolism [PATH:cser00564]
D      CCO03_15350 glycerol-3-phosphate dehydrogenase	K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D      CCO03_18505 hypothetical protein	K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D      CCO03_03025 glycerol-3-phosphate acyltransferase	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      CCO03_07430 hypothetical protein	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      CCO03_02290 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      CCO03_12735 diacylglycerol kinase	K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D      CCO03_09050 hypothetical protein	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D      CCO03_10135 glycerophosphodiester phosphodiesterase	K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D      CCO03_13085 phosphatidate cytidylyltransferase	K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D      CCO03_14820 phosphatidate cytidylyltransferase	K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D      CCO03_12665 CDP-diacylglycerol--serine O-phosphatidyltransferase	K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D      CCO03_00275 phosphatidylserine decarboxylase	K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D      CCO03_13060 CDP-alcohol phosphatidyltransferase	K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D      CCO03_00130 phosphatidylglycerophosphatase A	K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D      CCO03_15140 cardiolipin synthase	K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D      CCO03_06940 cardiolipin synthase	K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D      CCO03_13090 hypothetical protein	K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D      CCO03_18650 hypothetical protein	K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D      CCO03_13255 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C    00565 Ether lipid metabolism [PATH:cser00565]
D      CCO03_09050 hypothetical protein	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C    00600 Sphingolipid metabolism
C    00590 Arachidonic acid metabolism
D      CCO03_09050 hypothetical protein	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C    00591 Linoleic acid metabolism
D      CCO03_09050 hypothetical protein	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C    00592 alpha-Linolenic acid metabolism [PATH:cser00592]
D      CCO03_09050 hypothetical protein	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D      CCO03_18025 acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01040 Biosynthesis of unsaturated fatty acids [PATH:cser01040]
D      CCO03_08035 arylesterase	K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D      CCO03_00110 hypothetical protein	K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D      CCO03_16120 acyl-CoA thioesterase	K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B  09104 Nucleotide metabolism
C    00230 Purine metabolism [PATH:cser00230]
D      CCO03_05070 hypothetical protein	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      CCO03_16545 ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      CCO03_15115 amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      CCO03_10435 phosphoribosylamine--glycine ligase	K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D      CCO03_06180 phosphoribosylglycinamide formyltransferase	K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D      CCO03_14990 phosphoribosylglycinamide formyltransferase 2	K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D      CCO03_04520 phosphoribosylformylglycinamidine synthase	K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D      CCO03_04180 phosphoribosylformylglycinamidine cyclo-ligase	K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D      CCO03_00500 5-(carboxyamino)imidazole ribonucleotide synthase	K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D      CCO03_01100 5-(carboxyamino)imidazole ribonucleotide mutase	K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D      CCO03_00735 phosphoribosylaminoimidazolesuccinocarboxamide synthase	K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D      CCO03_01705 adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      CCO03_00165 adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      CCO03_07000 5'-nucleotidase	K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D      CCO03_14110 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      CCO03_16220 hypothetical protein	K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D      CCO03_12770 hypothetical protein	K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D      CCO03_10855 IMP dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      CCO03_13605 nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      CCO03_12020 non-canonical purine NTP pyrophosphatase	K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D      CCO03_03955 glutamine amidotransferase	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      CCO03_10850 GMP synthase (glutamine-hydrolyzing)	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      CCO03_10690 GMP reductase	K00364 guaC; GMP reductase [EC:1.7.1.7]
D      CCO03_13915 guanylate kinase	K00942 gmk; guanylate kinase [EC:2.7.4.8]
D      CCO03_17385 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      CCO03_10940 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      CCO03_10935 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      CCO03_16150 deoxyguanosinetriphosphate triphosphohydrolase	K01129 dgt; dGTPase [EC:3.1.5.1]
D      CCO03_13925 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      CCO03_06080 exopolyphosphatase	K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D      CCO03_14185 GTP pyrophosphokinase	K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D      CCO03_00310 hypothetical protein	K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D      CCO03_09315 adenylosuccinate synthase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      CCO03_15735 carbohydrate kinase family protein	K00856 ADK; adenosine kinase [EC:2.7.1.20]
D      CCO03_03275 AMP nucleosidase	K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D      CCO03_12220 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      CCO03_11590 bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D      CCO03_12495 sulfate adenylyltransferase	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      CCO03_12490 sulfate adenylyltransferase small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      CCO03_14710 ureidoglycolate lyase	K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D      CCO03_00825 urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      CCO03_01790 urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      CCO03_00830 urease subunit beta	K01429 ureB; urease subunit beta [EC:3.5.1.5]
D      CCO03_00840 urease subunit gamma	K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D      CCO03_01785 Urease subunit alpha	K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C    00240 Pyrimidine metabolism [PATH:cser00240]
D      CCO03_14750 carB; carbamoyl phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      CCO03_14765 carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      CCO03_07440 aspartate carbamoyltransferase	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      CCO03_07435 dihydroorotase	K01465 URA4; dihydroorotase [EC:3.5.2.3]
D      CCO03_15560 dihydroorotase	K01465 URA4; dihydroorotase [EC:3.5.2.3]
D      CCO03_06150 dihydroorotate dehydrogenase (quinone)	K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D      CCO03_00685 orotate phosphoribosyltransferase	K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D      CCO03_00730 orotidine-5'-phosphate decarboxylase	K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D      CCO03_14835 UMP kinase	K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D      CCO03_13605 nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      CCO03_10880 septum formation inhibitor Maf	K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D      CCO03_11150 pyrG; CTP synthetase	K01937 pyrG; CTP synthase [EC:6.3.4.2]
D      CCO03_07000 5'-nucleotidase	K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D      CCO03_14110 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      CCO03_16220 hypothetical protein	K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D      CCO03_00070 uracil phosphoribosyltransferase	K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D      CCO03_07445 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      CCO03_13365 dCTP deaminase	K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D      CCO03_17385 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      CCO03_10940 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      CCO03_10935 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      CCO03_12830 dTMP kinase	K00943 tmk; dTMP kinase [EC:2.7.4.9]
D      CCO03_13245 hypothetical protein	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      CCO03_05470 thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D      CCO03_06575 hypothetical protein	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D      CCO03_17400 malonic semialdehyde reductase	K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B  09105 Amino acid metabolism
C    00250 Alanine, aspartate and glutamate metabolism [PATH:cser00250]
D      CCO03_09970 L-aspartate oxidase	K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D      CCO03_08280 hypothetical protein	K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D      CCO03_11225 L-asparaginase	K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D      CCO03_09140 aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      CCO03_00125 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      CCO03_11715 argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      CCO03_09315 adenylosuccinate synthase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      CCO03_01705 adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      CCO03_07440 aspartate carbamoyltransferase	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      CCO03_16340 NAD-dependent succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      CCO03_03590 glutamate synthase subunit alpha	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      CCO03_03595 gltD; glutamate synthase	K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D      CCO03_00610 glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      CCO03_10250 glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      CCO03_16435 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      CCO03_04905 type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      CCO03_14750 carB; carbamoyl phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      CCO03_14765 carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      CCO03_04925 glutaminase	K01425 glsA; glutaminase [EC:3.5.1.2]
D      CCO03_05270 glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      CCO03_15115 amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C    00260 Glycine, serine and threonine metabolism [PATH:cser00260]
D      CCO03_13385 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      CCO03_14290 aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      CCO03_09145 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      CCO03_13025 homoserine kinase	K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D      CCO03_09150 threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      CCO03_11360 glyA; serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      CCO03_09580 D-glycerate dehydrogenase	K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D      CCO03_03080 glycerate kinase	K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D      CCO03_07920 hypothetical protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      CCO03_15370 gpmA; phosphoglyceromutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      CCO03_16135 histidine phosphatase family protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      CCO03_07465 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      CCO03_12975 3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      CCO03_17210 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      CCO03_07855 phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      CCO03_18625 hypothetical protein	K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D      CCO03_07655 glycine dehydrogenase (aminomethyl-transferring)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      CCO03_07675 gcvT; glycine cleavage system protein T	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_07670 glycine cleavage system protein H	K02437 gcvH; glycine cleavage system H protein
D      CCO03_12665 CDP-diacylglycerol--serine O-phosphatidyltransferase	K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D      CCO03_03185 L-serine ammonia-lyase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      CCO03_03420 hypothetical protein	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      CCO03_17760 threonine ammonia-lyase, biosynthetic	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      CCO03_15990 threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      CCO03_14320 tryptophan synthase subunit alpha	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      CCO03_03970 hypothetical protein	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      CCO03_14315 tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      CCO03_06675 tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      CCO03_13315 diaminobutyrate--2-oxoglutarate transaminase	K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D      CCO03_13320 diaminobutyrate acetyltransferase	K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D      CCO03_13310 ectC; L-ectoine synthase	K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D      CCO03_13305 ectoine hydroxylase	K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
C    00270 Cysteine and methionine metabolism [PATH:cser00270]
D      CCO03_05520 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      CCO03_07165 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      CCO03_03525 cysteine synthase A	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      CCO03_09975 cystathionine beta-lyase	K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D      CCO03_04720 methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      CCO03_17745 methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      CCO03_02000 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D      CCO03_12770 hypothetical protein	K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D      CCO03_12470 aromatic amino acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      CCO03_08490 DNA (cytosine-5-)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      CCO03_18015 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      CCO03_13385 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      CCO03_14290 aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      CCO03_09145 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      CCO03_00225 homoserine O-acetyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      CCO03_10990 O-acetylhomoserine aminocarboxypropyltransferase	K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D      CCO03_15110 O-succinylhomoserine sulfhydrylase	K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D      CCO03_19035 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      CCO03_01640 glutamate--cysteine ligase	K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D      CCO03_06015 glutamate--cysteine ligase	K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D      CCO03_19250 glutathione synthase	K01920 gshB; glutathione synthase [EC:6.3.2.3]
D      CCO03_07820 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      CCO03_11415 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      CCO03_12935 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      CCO03_03185 L-serine ammonia-lyase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      CCO03_04945 cysteine synthase B	K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D      CCO03_07465 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      CCO03_12975 3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      CCO03_17210 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C    00280 Valine, leucine and isoleucine degradation [PATH:cser00280]
D      CCO03_19035 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_15145 acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      CCO03_02995 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_03870 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_18280 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_09890 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_14435 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_19140 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_01250 hypothetical protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_05940 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_11520 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_12185 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_13095 hypothetical protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_14470 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_01255 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      CCO03_18695 acyl-CoA dehydrogenase	K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_18025 acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      CCO03_08225 acetyl/propionyl-CoA carboxylase subunit alpha	K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D      CCO03_08210 methylmalonyl-CoA carboxyltransferase	K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D      CCO03_13325 acetyl/propionyl-CoA carboxylase subunit alpha	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      CCO03_08200 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      CCO03_03495 oxidoreductase	K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D      CCO03_11935 3-hydroxyisobutyrate dehydrogenase	K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D      CCO03_00940 methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      CCO03_11960 methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08000 malonyl-CoA synthase	K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D      CCO03_18770 aspartate aminotransferase family protein	K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D      CCO03_02780 3-methylcrotonyl-CoA carboxylase	K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D      CCO03_02765 methylcrotonoyl-CoA carboxylase	K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D      CCO03_02770 enoyl-CoA hydratase	K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D      CCO03_05975 hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      CCO03_14650 succinyl-CoA--3-ketoacid-CoA transferase	K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D      CCO03_14655 succinyl-CoA--3-ketoacid-CoA transferase	K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C    00290 Valine, leucine and isoleucine biosynthesis [PATH:cser00290]
D      CCO03_03420 hypothetical protein	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      CCO03_17760 threonine ammonia-lyase, biosynthetic	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      CCO03_15990 threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      CCO03_12625 3-isopropylmalate dehydratase large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      CCO03_12645 3-isopropylmalate dehydratase small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      CCO03_12585 3-isopropylmalate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D      CCO03_12680 acetolactate synthase, large subunit, biosynthetic type	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_04115 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_09635 acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_06630 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_12675 acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      CCO03_12670 ketol-acid reductoisomerase	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      CCO03_10475 dihydroxy-acid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      CCO03_19035 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      CCO03_09140 aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      CCO03_12655 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D      CCO03_12660 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00300 Lysine biosynthesis [PATH:cser00300]
D      CCO03_09145 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      CCO03_13385 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      CCO03_14290 aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      CCO03_10575 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      CCO03_02040 4-hydroxy-tetrahydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D      CCO03_08350 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D      CCO03_03965 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      CCO03_04125 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      CCO03_08355 succinyldiaminopimelate transaminase	K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D      CCO03_08340 succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      CCO03_17630 diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      CCO03_04840 diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      CCO03_03430 2-aminoadipate aminotransferase	K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D      CCO03_14220 aspartate aminotransferase	K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D      CCO03_17570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      CCO03_17565 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C    00310 Lysine degradation [PATH:cser00310]
D      CCO03_06255 dihydrolipoamide succinyltransferase	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_05650 acyl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16340 NAD-dependent succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      CCO03_04490 DUF1338 domain-containing protein	K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D      CCO03_12195 CoA transferase	K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D      CCO03_06540 CoA transferase	K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D      CCO03_00650 D-amino acid aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00220 Arginine biosynthesis [PATH:cser00220]
D      CCO03_04120 ornithine carbamoyltransferase	K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D      CCO03_00125 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      CCO03_11715 argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      CCO03_00460 arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      CCO03_09275 allophanate hydrolase	K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D      CCO03_00825 urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      CCO03_01790 urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      CCO03_00830 urease subunit beta	K01429 ureB; urease subunit beta [EC:3.5.1.5]
D      CCO03_00840 urease subunit gamma	K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D      CCO03_01785 Urease subunit alpha	K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D      CCO03_04925 glutaminase	K01425 glsA; glutaminase [EC:3.5.1.2]
D      CCO03_11225 L-asparaginase	K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D      CCO03_04905 type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      CCO03_00610 glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      CCO03_10250 glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      CCO03_09140 aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      CCO03_13360 amino-acid N-acetyltransferase	K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D      CCO03_15815 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase	K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D      CCO03_17810 acetylglutamate kinase	K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D      CCO03_00285 N-acetyl-gamma-glutamyl-phosphate reductase	K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D      CCO03_03965 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      CCO03_04125 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C    00330 Arginine and proline metabolism [PATH:cser00330]
D      CCO03_16275 creatininase	K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D      CCO03_09615 lysine decarboxylase	K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_01835 amiE; acylamide amidohydrolase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01950 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01805 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_06665 glutamyl-tRNA amidotransferase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_00460 arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      CCO03_18515 pyrroline-5-carboxylate reductase	K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D      CCO03_16435 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      CCO03_01685 ornithine cyclodeaminase	K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D      CCO03_15665 glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      CCO03_01635 glutamate-5-semialdehyde dehydrogenase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D      CCO03_12095 proline dioxygenase	K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D      CCO03_00650 D-amino acid aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C    00340 Histidine metabolism [PATH:cser00340]
D      CCO03_03665 ATP phosphoribosyltransferase	K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D      CCO03_09310 ATP phosphoribosyltransferase regulatory subunit	K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D      CCO03_05165 phosphoribosyl-ATP diphosphatase	K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D      CCO03_05160 hisI; phosphoribosyl-AMP cyclohydrolase	K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D      CCO03_14580 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase	K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D      CCO03_14585 imidazole glycerol phosphate synthase subunit HisH	K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D      CCO03_05155 imidazole glycerol phosphate synthase subunit HisF	K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D      CCO03_14590 imidazoleglycerol-phosphate dehydratase	K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D      CCO03_12510 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_14595 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_15330 hypothetical protein	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_04695 histidinol dehydrogenase	K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00350 Tyrosine metabolism [PATH:cser00350]
D      CCO03_12510 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_14595 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_15330 hypothetical protein	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_12470 aromatic amino acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      CCO03_05660 4-hydroxyphenylpyruvate dioxygenase	K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D      CCO03_12705 maleylacetoacetate isomerase	K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D      CCO03_12710 fumarylacetoacetase	K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D      CCO03_05945 fumarylacetoacetate hydrolase	K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D      CCO03_14280 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_01400 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_05850 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_07260 hypothetical protein	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      CCO03_14950 5-carboxymethyl-2-hydroxymuconate isomerase	K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D      CCO03_00570 2-oxo-hepta-3-ene-1,7-dioic acid hydratase	K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D      CCO03_02605 2-dehydro-3-deoxyglucarate aldolase	K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D      CCO03_16340 NAD-dependent succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      CCO03_08190 NAD(P)-dependent alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      CCO03_00420 NAD(P)-dependent alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      CCO03_18740 fumarylacetoacetase	K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C    00360 Phenylalanine metabolism [PATH:cser00360]
D      CCO03_05655 phenylalanine 4-monooxygenase	K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D      CCO03_04455 enoyl-CoA hydratase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      CCO03_03840 hypothetical protein	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      CCO03_07425 hypothetical protein	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      CCO03_19115 enoyl-CoA hydratase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      CCO03_01905 enoyl-CoA hydratase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      CCO03_01340 enoyl-CoA hydratase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_07980 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      CCO03_18745 3-hydroxybutyryl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      CCO03_12510 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_14595 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_15330 hypothetical protein	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_12470 aromatic amino acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      CCO03_08190 NAD(P)-dependent alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      CCO03_00420 NAD(P)-dependent alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      CCO03_05660 4-hydroxyphenylpyruvate dioxygenase	K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D      CCO03_16390 D-amino acid dehydrogenase small subunit	K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D      CCO03_00650 D-amino acid aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      CCO03_01835 amiE; acylamide amidohydrolase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01950 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01805 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_06665 glutamyl-tRNA amidotransferase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_02725 pyridine nucleotide-disulfide oxidoreductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      CCO03_06140 alpha/beta hydrolase	K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D      CCO03_12390 hypothetical protein	K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C    00380 Tryptophan metabolism [PATH:cser00380]
D      CCO03_09260 esterase	K01432 AFMID; arylformamidase [EC:3.5.1.9]
D      CCO03_06255 dihydrolipoamide succinyltransferase	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_05650 acyl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_01835 amiE; acylamide amidohydrolase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01950 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01805 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_06665 glutamyl-tRNA amidotransferase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_14635 catalase	K03781 katE; catalase [EC:1.11.1.6]
C    00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cser00400]
D      CCO03_00255 3-deoxy-7-phosphoheptulonate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      CCO03_03140 3-deoxy-7-phosphoheptulonate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      CCO03_16155 3-dehydroquinate synthase	K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D      CCO03_06135 type II 3-dehydroquinate dehydratase	K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D      CCO03_03065 shikimate dehydrogenase	K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D      CCO03_16160 shikimate kinase	K00891 aroK; shikimate kinase [EC:2.7.1.71]
D      CCO03_17225 cytidylate kinase	K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D      CCO03_08960 chorismate synthase	K01736 aroC; chorismate synthase [EC:4.2.3.5]
D      CCO03_02670 anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      CCO03_02675 anthranilate/aminodeoxychorismate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      CCO03_02685 anthranilate phosphoribosyltransferase	K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D      CCO03_14310 N-(5'-phosphoribosyl)anthranilate isomerase	K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D      CCO03_19245 trpC; indole-3-glycerol-phosphate synthase	K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D      CCO03_14320 tryptophan synthase subunit alpha	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      CCO03_03970 hypothetical protein	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      CCO03_14315 tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      CCO03_06675 tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      CCO03_17215 chorismate mutase	K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D      CCO03_17220 prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      CCO03_12510 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_14595 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_15330 hypothetical protein	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_12470 aromatic amino acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      CCO03_05655 phenylalanine 4-monooxygenase	K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D      CCO03_04245 hypothetical protein	K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B  09106 Metabolism of other amino acids
C    00410 beta-Alanine metabolism [PATH:cser00410]
D      CCO03_11485 aspartate 1-decarboxylase	K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_15340 pantoate--beta-alanine ligase	K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D      CCO03_06575 hypothetical protein	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D      CCO03_18770 aspartate aminotransferase family protein	K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_15145 acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      CCO03_11005 malonyl-CoA decarboxylase	K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D      CCO03_00940 methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      CCO03_11960 methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C    00430 Taurine and hypotaurine metabolism
D      CCO03_12765 gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      CCO03_11125 gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C    00440 Phosphonate and phosphinate metabolism
D      CCO03_10340 phosphonoacetaldehyde hydrolase	K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
C    00450 Selenocompound metabolism [PATH:cser00450]
D      CCO03_09975 cystathionine beta-lyase	K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D      CCO03_04720 methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      CCO03_05505 cysteine desulfurase	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      CCO03_12505 hypothetical protein	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      CCO03_15525 thioredoxin-disulfide reductase	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      CCO03_12495 sulfate adenylyltransferase	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      CCO03_12490 sulfate adenylyltransferase small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      CCO03_07925 methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C    00460 Cyanoamino acid metabolism [PATH:cser00460]
D      CCO03_12765 gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      CCO03_11125 gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      CCO03_08280 hypothetical protein	K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D      CCO03_11360 glyA; serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      CCO03_01845 formamidase	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C    00470 D-Amino acid metabolism [PATH:cser00470]
D      CCO03_19060 alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      CCO03_00650 D-amino acid aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      CCO03_17535 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      CCO03_04925 glutaminase	K01425 glsA; glutaminase [EC:3.5.1.2]
D      CCO03_11225 L-asparaginase	K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D      CCO03_11570 glutamate racemase	K01776 murI; glutamate racemase [EC:5.1.1.3]
D      CCO03_17555 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      CCO03_16130 alanine racemase	K19967 dta; D-threonine aldolase [EC:4.1.2.42]
D      CCO03_17630 diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      CCO03_04840 diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      CCO03_17635 FAD-dependent oxidoreductase	K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D      CCO03_16390 D-amino acid dehydrogenase small subunit	K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C    00480 Glutathione metabolism [PATH:cser00480]
D      CCO03_12765 gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      CCO03_11125 gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      CCO03_12620 gamma-glutamylcyclotransferase	K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D      CCO03_13340 hypothetical protein	K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D      CCO03_02700 glutamate--cysteine ligase	K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D      CCO03_01640 glutamate--cysteine ligase	K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D      CCO03_06015 glutamate--cysteine ligase	K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D      CCO03_19250 glutathione synthase	K01920 gshB; glutathione synthase [EC:6.3.2.3]
D      CCO03_12800 leucyl aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      CCO03_14945 aminopeptidase N	K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D      CCO03_12450 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_00605 glutathione transferase GstA	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_13895 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_05335 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_14575 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_01710 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_07300 hypothetical protein	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_13240 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_11235 glutathione-disulfide reductase	K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D      CCO03_13890 NADP-dependent isocitrate dehydrogenase	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      CCO03_06730 glutathione peroxidase	K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D      CCO03_01070 peroxiredoxin	K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
B
B  09107 Glycan biosynthesis and metabolism
C    00510 N-Glycan biosynthesis
C    00513 Various types of N-glycan biosynthesis
C    00512 Mucin type O-glycan biosynthesis
C    00515 Mannose type O-glycan biosynthesis
C    00514 Other types of O-glycan biosynthesis
C    00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C    00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C    00533 Glycosaminoglycan biosynthesis - keratan sulfate
C    00531 Glycosaminoglycan degradation
C    00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C    00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C    00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C    00604 Glycosphingolipid biosynthesis - ganglio series
C    00511 Other glycan degradation
C    00540 Lipopolysaccharide biosynthesis [PATH:cser00540]
D      CCO03_14785 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D      CCO03_17515 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D      CCO03_14795 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D      CCO03_07185 UDP-2,3-diacylglucosamine diphosphatase	K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D      CCO03_14780 lipid-A-disaccharide synthase	K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D      CCO03_10775 tetraacyldisaccharide 4'-kinase	K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D      CCO03_00160 arabinose-5-phosphate isomerase	K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D      CCO03_11155 3-deoxy-8-phosphooctulonate synthase	K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D      CCO03_00155 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D      CCO03_12225 3-deoxy-manno-octulosonate cytidylyltransferase	K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D      CCO03_05150 3-deoxy-D-manno-octulosonic acid transferase	K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D      CCO03_17735 lipid A biosynthesis acyltransferase	K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D      CCO03_17740 lipid A biosynthesis acyltransferase	K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D      CCO03_02190 aspartyl beta-hydroxylase	K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D      CCO03_07625 phosphoethanolamine transferase	K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D      CCO03_11865 hypothetical protein	K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D      CCO03_03475 phosphoheptose isomerase	K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D      CCO03_02295 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D      CCO03_12150 sulfatase	K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D      CCO03_19020 hypothetical protein	K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C    00542 O-Antigen repeat unit biosynthesis
C    00541 O-Antigen nucleotide sugar biosynthesis [PATH:cser00541]
D      CCO03_06060 UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      CCO03_04665 UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      CCO03_04660 capsular biosynthesis protein CpsI	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D      CCO03_17965 glucose-1-phosphate thymidylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      CCO03_17975 dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      CCO03_17945 dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      CCO03_17970 dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D      CCO03_11020 CDP-6-deoxy-delta-3,4-glucoseen reductase	K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D      CCO03_02160 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      CCO03_05145 phosphomannomutase/phosphoglucomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      CCO03_02135 GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      CCO03_02130 GDP-mannose 4,6 dehydratase	K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D      CCO03_17420 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D      CCO03_11905 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      CCO03_05600 nucleotide sugar dehydrogenase	K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D      CCO03_06555 oxidoreductase	K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D      CCO03_07800 aminotransferase DegT	K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D      CCO03_05380 N-acetyltransferase	K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C    00550 Peptidoglycan biosynthesis [PATH:cser00550]
D      CCO03_03655 UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      CCO03_17430 UDP-N-acetylenolpyruvoylglucosamine reductase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      CCO03_17540 UDP-N-acetylmuramate--L-alanine ligase	K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D      CCO03_17555 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      CCO03_17570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      CCO03_17535 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      CCO03_17565 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D      CCO03_14825 di-trans,poly-cis-decaprenylcistransferase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      CCO03_11310 undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      CCO03_17560 phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      CCO03_17545 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      CCO03_03055 monofunctional biosynthetic peptidoglycan transglycosylase	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      CCO03_00565 hypothetical protein	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      CCO03_10670 penicillin-binding protein	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      CCO03_16195 penicillin-binding protein	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      CCO03_12850 hypothetical protein	K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D      CCO03_01545 penicillin-binding protein 2	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      CCO03_17575 cell division protein	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      CCO03_00075 peptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D      CCO03_00010 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C    00552 Teichoic acid biosynthesis [PATH:cser00552]
D      CCO03_11310 undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C    00571 Lipoarabinomannan (LAM) biosynthesis
C    00572 Arabinogalactan biosynthesis - Mycobacterium
C    00543 Exopolysaccharide biosynthesis [PATH:cser00543]
D      CCO03_05520 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      CCO03_07165 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B  09108 Metabolism of cofactors and vitamins
C    00730 Thiamine metabolism [PATH:cser00730]
D      CCO03_15915 phosphomethylpyrimidine synthase ThiC	K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D      CCO03_11745 hypothetical protein	K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D      CCO03_14025 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D      CCO03_14040 hypothetical protein	K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D      CCO03_13160 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      CCO03_14055 hypothetical protein	K03153 thiO; glycine oxidase [EC:1.4.3.19]
D      CCO03_11390 1-deoxy-D-xylulose-5-phosphate synthase	K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D      CCO03_14045 thiazole synthase	K03149 thiG; thiazole synthase [EC:2.8.1.10]
D      CCO03_04575 thiamine-phosphate kinase	K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D      CCO03_14245 ribosome small subunit-dependent GTPase A	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      CCO03_12220 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      CCO03_08145 thiaminase II	K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D      CCO03_16345 TenA family transcriptional regulator	K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C    00740 Riboflavin metabolism [PATH:cser00740]
D      CCO03_10620 3,4-dihydroxy-2-butanone-4-phosphate synthase	K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D      CCO03_06050 riboflavin biosynthesis protein RibD	K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D      CCO03_06820 HAD family hydrolase	K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D      CCO03_10625 6,7-dimethyl-8-ribityllumazine synthase	K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D      CCO03_16200 riboflavin synthase subunit beta	K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D      CCO03_10615 riboflavin synthase	K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D      CCO03_09000 riboflavin biosynthesis protein RibF	K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D      CCO03_04570 acid phosphatase	K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D      CCO03_16115 FMN reductase (NADPH)	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      CCO03_13215 5,6-dimethylbenzimidazole synthase	K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D      CCO03_05070 hypothetical protein	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C    00750 Vitamin B6 metabolism [PATH:cser00750]
D      CCO03_12520 pyridoxamine 5'-phosphate oxidase	K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D      CCO03_01445 pyridoxal kinase	K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D      CCO03_17210 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      CCO03_15900 4-hydroxythreonine-4-phosphate dehydrogenase PdxA	K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D      CCO03_03400 pyridoxine 5'-phosphate synthase	K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D      CCO03_09150 threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
C    00760 Nicotinate and nicotinamide metabolism [PATH:cser00760]
D      CCO03_09970 L-aspartate oxidase	K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D      CCO03_09965 quinolinate synthase	K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D      CCO03_16400 nicotinate-nucleotide diphosphorylase (carboxylating)	K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D      CCO03_16380 nicotinate phosphoribosyltransferase	K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D      CCO03_09570 nicotinate phosphoribosyltransferase	K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D      CCO03_07000 5'-nucleotidase	K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D      CCO03_14110 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      CCO03_16365 cytidyltransferase	K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D      CCO03_16375 NAD+ synthase	K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D      CCO03_00135 damage-inducible protein CinA	K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D      CCO03_08140 NAD-dependent deacylase	K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D      CCO03_16420 NAD kinase	K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D      CCO03_16340 NAD-dependent succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C    00770 Pantothenate and CoA biosynthesis [PATH:cser00770]
D      CCO03_12680 acetolactate synthase, large subunit, biosynthetic type	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_04115 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_09635 acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_06630 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      CCO03_12675 acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      CCO03_12670 ketol-acid reductoisomerase	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      CCO03_10475 dihydroxy-acid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      CCO03_07335 3-methyl-2-oxobutanoate hydroxymethyltransferase	K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D      CCO03_03060 2-dehydropantoate 2-reductase	K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D      CCO03_11145 2-dehydropantoate 2-reductase	K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D      CCO03_15340 pantoate--beta-alanine ligase	K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D      CCO03_19090 type III pantothenate kinase	K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D      CCO03_13235 phosphopantothenate synthase	K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D      CCO03_15175 pantetheine-phosphate adenylyltransferase	K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D      CCO03_15790 dephospho-CoA kinase	K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D      CCO03_06120 holo-ACP synthase	K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D      CCO03_19035 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      CCO03_06575 hypothetical protein	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D      CCO03_11485 aspartate 1-decarboxylase	K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00780 Biotin metabolism [PATH:cser00780]
D      CCO03_05730 hypothetical protein	K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D      CCO03_00960 beta-ketoacyl-[acyl-carrier-protein] synthase I	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      CCO03_10080 beta-ketoacyl-[acyl-carrier-protein] synthase II	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      CCO03_03345 beta-ketoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      CCO03_13190 beta-ketoacyl synthase	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      CCO03_03335 fabG; 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_04440 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_00365 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_05230 oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_09895 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_10095 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_01405 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_06795 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_14790 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      CCO03_10485 hypothetical protein	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      CCO03_12285 enoyl-[acyl-carrier-protein] reductase	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      CCO03_08230 biotin synthase BioB	K01012 bioB; biotin synthase [EC:2.8.1.6]
D      CCO03_19310 biotin--[acetyl-CoA-carboxylase] ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C    00785 Lipoic acid metabolism [PATH:cser00785]
D      CCO03_00670 lipoyl synthase	K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_08255 pyruvate dehydrogenase (acetyl-transferring), homodimeric type	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      CCO03_08260 dihydrolipoyllysine-residue acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      CCO03_06255 dihydrolipoamide succinyltransferase	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      CCO03_07655 glycine dehydrogenase (aminomethyl-transferring)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      CCO03_07675 gcvT; glycine cleavage system protein T	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      CCO03_07670 glycine cleavage system protein H	K02437 gcvH; glycine cleavage system H protein
C    00790 Folate biosynthesis [PATH:cser00790]
D      CCO03_13705 GTP cyclohydrolase	K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D      CCO03_18345 hypothetical protein	K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D      CCO03_18350 dihydroneopterin aldolase	K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D      CCO03_10120 dihydropteroate synthase	K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D      CCO03_05450 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      CCO03_15130 bifunctional tetrahydrofolate synthase/dihydrofolate synthase	K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D      CCO03_10620 3,4-dihydroxy-2-butanone-4-phosphate synthase	K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D      CCO03_09530 hypothetical protein	K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D      CCO03_14035 6-pyruvoyl tetrahydrobiopterin synthase	K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D      CCO03_10240 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      CCO03_05655 phenylalanine 4-monooxygenase	K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D      CCO03_14030 7-carboxy-7-deazaguanine synthase QueE	K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D      CCO03_00115 7-cyano-7-deazaguanine synthase QueC	K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D      CCO03_12090 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D      CCO03_10170 cyclic pyranopterin phosphate synthase	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      CCO03_16310 cyclic pyranopterin monophosphate synthase MoaC	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      CCO03_12420 molybdopterin adenylyltransferase	K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D      CCO03_09160 molybdopterin molybdenumtransferase MoeA	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      CCO03_02465 molybdenum cofactor guanylyltransferase	K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C    00670 One carbon pool by folate [PATH:cser00670]
D      CCO03_05450 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      CCO03_04460 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      CCO03_11360 glyA; serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      CCO03_06180 phosphoribosylglycinamide formyltransferase	K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D      CCO03_18550 methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      CCO03_07675 gcvT; glycine cleavage system protein T	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      CCO03_04720 methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      CCO03_05470 thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D      CCO03_04770 formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      CCO03_18005 methylenetetrahydrofolate reductase [NAD(P)H]	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      CCO03_16675 5-formyltetrahydrofolate cyclo-ligase	K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C    00830 Retinol metabolism
C    00860 Porphyrin metabolism [PATH:cser00860]
D      CCO03_15105 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      CCO03_10590 glutamyl-tRNA reductase	K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D      CCO03_11750 glutamate-1-semialdehyde-2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      CCO03_00100 delta-aminolevulinic acid dehydratase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      CCO03_11700 hydroxymethylbilane synthase	K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D      CCO03_11695 hypothetical protein	K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D      CCO03_18640 uroporphyrinogen decarboxylase	K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D      CCO03_10400 coproporphyrinogen III oxidase	K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D      CCO03_13905 oxygen-independent coproporphyrinogen III oxidase	K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D      CCO03_00095 hypothetical protein	K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D      CCO03_06815 ferrochelatase	K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D      CCO03_11690 hypothetical protein	K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D      CCO03_10420 uroporphyrinogen-III C-methyltransferase	K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D      CCO03_06230 uroporphyrinogen-III C-methyltransferase	K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D      CCO03_05780 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      CCO03_05775 heme A synthase	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      CCO03_12815 hypothetical protein	K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D      CCO03_13780 precorrin-2 C(20)-methyltransferase	K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D      CCO03_13770 hypothetical protein	K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D      CCO03_13785 precorrin-3B C(17)-methyltransferase	K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D      CCO03_13805 precorrin-4 C(11)-methyltransferase	K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D      CCO03_13810 precorrin-6A synthase (deacetylating)	K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D      CCO03_13790 cobalt-precorrin-6A reductase	K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D      CCO03_13795 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE	K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D      CCO03_13775 cobH; precorrin-8X methylmutase	K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D      CCO03_10505 hypothetical protein	K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D      CCO03_05300 cobaltochelatase subunit CobN	K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D      CCO03_00745 ATP:cob(I)alamin adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      CCO03_13210 cob(I)yrinic acid a,c-diamide adenosyltransferase	K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      CCO03_15325 cobyric acid synthase CobQ	K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D      CCO03_13220 cobalamin biosynthesis protein CobD	K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D      CCO03_14060 hypothetical protein	K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D      CCO03_11295 hypothetical protein	K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D      CCO03_14260 adenosylcobinamide-GDP ribazoletransferase	K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D      CCO03_14265 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D      CCO03_14255 hypothetical protein	K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D      CCO03_14660 hypothetical protein	K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D      CCO03_05305 hypothetical protein	K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D      CCO03_04790 bacterioferritin	K03594 bfr; bacterioferritin [EC:1.16.3.1]
D      CCO03_10310 bacterioferritin	K03594 bfr; bacterioferritin [EC:1.16.3.1]
D      CCO03_15845 bacterioferritin	K03594 bfr; bacterioferritin [EC:1.16.3.1]
C    00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cser00130]
D      CCO03_04245 hypothetical protein	K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D      CCO03_18525 4-hydroxybenzoate polyprenyltransferase	K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D      CCO03_17190 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase	K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D      CCO03_15985 dimethylmenaquinone methyltransferase	K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D      CCO03_06970 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase	K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D      CCO03_17755 demethoxyubiquinone hydroxylase family protein	K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D      CCO03_15455 hypothetical protein	K02361 entC; isochorismate synthase [EC:5.4.4.2]
D      CCO03_05660 4-hydroxyphenylpyruvate dioxygenase	K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B  09109 Metabolism of terpenoids and polyketides
C    00900 Terpenoid backbone biosynthesis [PATH:cser00900]
D      CCO03_11390 1-deoxy-D-xylulose-5-phosphate synthase	K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D      CCO03_14815 1-deoxy-D-xylulose-5-phosphate reductoisomerase	K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D      CCO03_14350 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D      CCO03_16535 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D      CCO03_07525 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D      CCO03_13585 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D      CCO03_11190 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_11395 polyprenyl synthetase	K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D      CCO03_15685 octaprenyl diphosphate synthase	K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D      CCO03_14825 di-trans,poly-cis-decaprenylcistransferase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      CCO03_14240 peptidase M48	K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C    00902 Monoterpenoid biosynthesis
C    00909 Sesquiterpenoid and triterpenoid biosynthesis
C    00904 Diterpenoid biosynthesis
C    00906 Carotenoid biosynthesis [PATH:cser00906]
D      CCO03_06830 squalene synthase HpnD	K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C    00905 Brassinosteroid biosynthesis
C    00981 Insect hormone biosynthesis
C    00908 Zeatin biosynthesis
C    00903 Limonene degradation
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00907 Pinene, camphor and geraniol degradation [PATH:cser00907]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_16370 2,4-dienoyl-CoA reductase	K13774 atuB; citronellol/citronellal dehydrogenase
D      CCO03_15605 acyl-CoA dehydrogenase	K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D      CCO03_15600 carbamoyl-phosphate synthase large subunit	K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D      CCO03_05975 hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      CCO03_18025 acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01052 Type I polyketide structures
C    00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C    01051 Biosynthesis of ansamycins
D      CCO03_01205 transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C    01059 Biosynthesis of enediyne antibiotics
D      CCO03_03245 hypothetical protein	K21164 sgcE7; enediyne biosynthesis protein E7
C    01056 Biosynthesis of type II polyketide backbone
C    01057 Biosynthesis of type II polyketide products
C    00253 Tetracycline biosynthesis
C    00523 Polyketide sugar unit biosynthesis [PATH:cser00523]
D      CCO03_17965 glucose-1-phosphate thymidylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      CCO03_17975 dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      CCO03_17945 dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      CCO03_17970 dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D      CCO03_02175 erythromycin biosynthesis sensory transduction protein eryC1	K16436 evaB; dTDP-3-amino-2,3,6-trideoxy-4-keto-D-glucose/dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose/dTDP-2,6-dideoxy-D-kanosamine transaminase [EC:2.6.1.- 2.6.1.106]
C    01054 Nonribosomal peptide structures
C    01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cser01053]
D      CCO03_15455 hypothetical protein	K02361 entC; isochorismate synthase [EC:5.4.4.2]
D      CCO03_15460 2,3-dihydro-2,3-dihydroxybenzoate synthetase	K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D      CCO03_15450 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D      CCO03_15435 entE; 2,3-dihydroxybenzoate-AMP ligase	K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D      CCO03_15445 non-ribosomal peptide synthetase	K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C    01055 Biosynthesis of vancomycin group antibiotics [PATH:cser01055]
D      CCO03_11830 hypothetical protein	K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D      CCO03_17975 dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      CCO03_02175 erythromycin biosynthesis sensory transduction protein eryC1	K16436 evaB; dTDP-3-amino-2,3,6-trideoxy-4-keto-D-glucose/dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose/dTDP-2,6-dideoxy-D-kanosamine transaminase [EC:2.6.1.- 2.6.1.106]
B
B  09110 Biosynthesis of other secondary metabolites
C    00940 Phenylpropanoid biosynthesis
C    00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C    00941 Flavonoid biosynthesis
C    00944 Flavone and flavonol biosynthesis
C    00942 Anthocyanin biosynthesis
C    00943 Isoflavonoid biosynthesis
C    00946 Degradation of flavonoids
C    00901 Indole alkaloid biosynthesis
C    00403 Indole diterpene alkaloid biosynthesis
C    00950 Isoquinoline alkaloid biosynthesis
C    00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C    00996 Biosynthesis of various alkaloids
C    00232 Caffeine metabolism
C    00965 Betalain biosynthesis
C    00966 Glucosinolate biosynthesis
C    00402 Benzoxazinoid biosynthesis
C    00311 Penicillin and cephalosporin biosynthesis
D      CCO03_12170 class A beta-lactamase	K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C    00332 Carbapenem biosynthesis [PATH:cser00332]
D      CCO03_15665 glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      CCO03_01635 glutamate-5-semialdehyde dehydrogenase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C    00261 Monobactam biosynthesis [PATH:cser00261]
D      CCO03_11830 hypothetical protein	K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D      CCO03_12495 sulfate adenylyltransferase	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      CCO03_12490 sulfate adenylyltransferase small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      CCO03_13385 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      CCO03_14290 aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      CCO03_10575 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      CCO03_02040 4-hydroxy-tetrahydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C    00331 Clavulanic acid biosynthesis
C    00521 Streptomycin biosynthesis [PATH:cser00521]
D      CCO03_14455 inositol monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      CCO03_17965 glucose-1-phosphate thymidylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      CCO03_17975 dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      CCO03_17945 dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      CCO03_17970 dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C    00524 Neomycin, kanamycin and gentamicin biosynthesis
C    00525 Acarbose and validamycin biosynthesis [PATH:cser00525]
D      CCO03_17965 glucose-1-phosphate thymidylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      CCO03_17975 dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C    00401 Novobiocin biosynthesis [PATH:cser00401]
D      CCO03_17220 prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      CCO03_12510 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_14595 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_15330 hypothetical protein	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_12470 aromatic amino acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C    00404 Staurosporine biosynthesis
C    00405 Phenazine biosynthesis
D      CCO03_02670 anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      CCO03_02675 anthranilate/aminodeoxychorismate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C    00333 Prodigiosin biosynthesis
D      CCO03_03330 [acyl-carrier-protein] S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      CCO03_03335 fabG; 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_04440 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_00365 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_05230 oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_09895 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_10095 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_01405 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_06795 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_12285 enoyl-[acyl-carrier-protein] reductase	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C    00254 Aflatoxin biosynthesis
C    00998 Biosynthesis of various antibiotics
D      CCO03_03340 acyl carrier protein	K02078 acpP; acyl carrier protein
D      CCO03_13975 acyl carrier protein	K02078 acpP; acyl carrier protein
D      CCO03_13195 phosphopantetheine-binding protein	K02078 acpP; acyl carrier protein
D      CCO03_11090 hypothetical protein	K02078 acpP; acyl carrier protein
C    00999 Biosynthesis of various plant secondary metabolites [PATH:cser00999]
D      CCO03_17745 methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      CCO03_03065 shikimate dehydrogenase	K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C    00997 Biosynthesis of various other secondary metabolites
B
B  09111 Xenobiotics biodegradation and metabolism
C    00362 Benzoate degradation [PATH:cser00362]
D      CCO03_07055 benzoate 1,2-dioxygenase large subunit	K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D      CCO03_07060 benzoate 1,2-dioxygenase small subunit	K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D      CCO03_07065 NADH oxidase	K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D      CCO03_07070 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase	K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D      CCO03_07050 catechol 1,2-dioxygenase	K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D      CCO03_07045 muconate cycloisomerase	K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D      CCO03_07085 muconolactone delta-isomerase	K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D      CCO03_05685 3-oxoadipate enol-lactonase	K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D      CCO03_07080 3-oxoadipate enol-lactonase	K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D      CCO03_05670 3-oxoadipate CoA-transferase	K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D      CCO03_05675 3-oxoadipate CoA-transferase	K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D      CCO03_18025 acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      CCO03_05680 3-oxoadipyl-CoA thiolase	K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D      CCO03_05855 esterase	K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9]
D      CCO03_12390 hypothetical protein	K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D      CCO03_01560 4-oxalocrotonate tautomerase	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D      CCO03_02930 4-carboxymuconolactone decarboxylase	K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D      CCO03_10895 carboxymuconolactone decarboxylase	K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D      CCO03_18840 cyclohexanecarboxylate-CoA ligase	K04116 aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
D      CCO03_18835 cyclohexanecarboxyl-CoA dehydrogenase	K04117 aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
D      CCO03_18825 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase	K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D      CCO03_18830 2-ketocyclohexanecarboxyl-CoA hydrolase	K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
D      CCO03_05490 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      CCO03_18035 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      CCO03_05650 acyl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      CCO03_07980 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      CCO03_18745 3-hydroxybutyryl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C    00627 Aminobenzoate degradation [PATH:cser00627]
D      CCO03_01835 amiE; acylamide amidohydrolase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01950 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01805 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_06665 glutamyl-tRNA amidotransferase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_08180 oxidoreductase	K03863 vanB; vanillate monooxygenase ferredoxin subunit
D      CCO03_00410 oxidoreductase	K03863 vanB; vanillate monooxygenase ferredoxin subunit
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C    00364 Fluorobenzoate degradation [PATH:cser00364]
D      CCO03_07055 benzoate 1,2-dioxygenase large subunit	K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D      CCO03_07060 benzoate 1,2-dioxygenase small subunit	K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D      CCO03_07065 NADH oxidase	K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D      CCO03_07070 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase	K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D      CCO03_07050 catechol 1,2-dioxygenase	K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D      CCO03_14525 carboxymethylenebutenolidase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D      CCO03_01655 carboxymethylenebutenolidase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D      CCO03_10800 dienelactone hydrolase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D      CCO03_07045 muconate cycloisomerase	K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C    00625 Chloroalkane and chloroalkene degradation [PATH:cser00625]
D      CCO03_07260 hypothetical protein	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      CCO03_14280 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_01400 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_05850 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_08925 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      CCO03_08310 aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cser00361]
D      CCO03_07050 catechol 1,2-dioxygenase	K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D      CCO03_14525 carboxymethylenebutenolidase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D      CCO03_01655 carboxymethylenebutenolidase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D      CCO03_10800 dienelactone hydrolase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D      CCO03_07045 muconate cycloisomerase	K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C    00623 Toluene degradation [PATH:cser00623]
D      CCO03_08190 NAD(P)-dependent alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      CCO03_00420 NAD(P)-dependent alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      CCO03_07050 catechol 1,2-dioxygenase	K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D      CCO03_07045 muconate cycloisomerase	K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D      CCO03_14525 carboxymethylenebutenolidase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D      CCO03_01655 carboxymethylenebutenolidase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D      CCO03_10800 dienelactone hydrolase	K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C    00622 Xylene degradation [PATH:cser00622]
D      CCO03_08190 NAD(P)-dependent alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      CCO03_00420 NAD(P)-dependent alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      CCO03_07055 benzoate 1,2-dioxygenase large subunit	K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D      CCO03_07060 benzoate 1,2-dioxygenase small subunit	K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D      CCO03_07065 NADH oxidase	K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D      CCO03_07070 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase	K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D      CCO03_05855 esterase	K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9]
D      CCO03_01560 4-oxalocrotonate tautomerase	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D      CCO03_12390 hypothetical protein	K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C    00633 Nitrotoluene degradation [PATH:cser00633]
D      CCO03_09240 alkene reductase	K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C    00642 Ethylbenzene degradation
D      CCO03_18025 acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    00643 Styrene degradation [PATH:cser00643]
D      CCO03_12705 maleylacetoacetate isomerase	K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D      CCO03_12710 fumarylacetoacetase	K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D      CCO03_05945 fumarylacetoacetate hydrolase	K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D      CCO03_01835 amiE; acylamide amidohydrolase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01950 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_01805 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_06665 glutamyl-tRNA amidotransferase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      CCO03_05855 esterase	K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9]
C    00791 Atrazine degradation [PATH:cser00791]
D      CCO03_17450 cyanuric acid amidohydrolase	K03383 atzD; cyanuric acid amidohydrolase [EC:3.5.2.15]
D      CCO03_17440 AtzE family amidohydrolase	K19837 atzE; 1-carboxybiuret hydrolase [EC:3.5.1.131]
D      CCO03_09275 allophanate hydrolase	K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D      CCO03_00825 urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      CCO03_01790 urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      CCO03_00830 urease subunit beta	K01429 ureB; urease subunit beta [EC:3.5.1.5]
D      CCO03_00840 urease subunit gamma	K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D      CCO03_01785 Urease subunit alpha	K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C    00930 Caprolactam degradation [PATH:cser00930]
D      CCO03_07410 acyl-CoA dehydrogenase	K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D      CCO03_01365 acyl-CoA dehydrogenase	K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D      CCO03_07365 enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C    00363 Bisphenol degradation
C    00621 Dioxin degradation [PATH:cser00621]
D      CCO03_01560 4-oxalocrotonate tautomerase	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D      CCO03_12390 hypothetical protein	K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C    00626 Naphthalene degradation [PATH:cser00626]
D      CCO03_07260 hypothetical protein	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      CCO03_14280 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_01400 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      CCO03_05850 alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C    00624 Polycyclic aromatic hydrocarbon degradation
C    00365 Furfural degradation
C    00984 Steroid degradation
D      CCO03_15920 steroid delta-isomerase	K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1]
C    00980 Metabolism of xenobiotics by cytochrome P450
C    00982 Drug metabolism - cytochrome P450
C    00983 Drug metabolism - other enzymes
B
B  09112 Not included in regular maps
C    09113 Global maps only
#
A09120 Genetic Information Processing
B
B  09121 Transcription
C    03020 RNA polymerase [PATH:cser03020]
D      CCO03_19180 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      CCO03_19175 DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      CCO03_18425 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      CCO03_13920 DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C    03022 Basal transcription factors
D      CCO03_16040 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C    03040 Spliceosome
B
B  09122 Translation
C    03010 Ribosome [PATH:cser03010]
D      CCO03_17230 30S ribosomal protein S1	K02945 RP-S1; small subunit ribosomal protein S1
D      CCO03_14845 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      CCO03_01050 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      CCO03_18430 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      CCO03_18465 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      CCO03_09100 30S ribosomal protein S6	K02990 RP-S6; small subunit ribosomal protein S6
D      CCO03_01000 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      CCO03_18480 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      CCO03_02250 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      CCO03_01015 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      CCO03_18435 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      CCO03_00995 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      CCO03_18440 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      CCO03_18485 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      CCO03_04965 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      CCO03_12355 30S ribosomal protein S16	K02959 RP-S16; small subunit ribosomal protein S16
D      CCO03_01065 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      CCO03_09110 30S ribosomal protein S18	K02963 RP-S18; small subunit ribosomal protein S18
D      CCO03_01040 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      CCO03_04160 30S ribosomal protein S20	K02968 RP-S20; small subunit ribosomal protein S20
D      CCO03_08130 30S ribosomal protein S21	K02970 RP-S21; small subunit ribosomal protein S21
D      CCO03_19195 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      CCO03_01035 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      CCO03_01020 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      CCO03_01025 50S ribosomal protein L4	K02926 RP-L4; large subunit ribosomal protein L4
D      CCO03_18490 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      CCO03_18475 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      CCO03_19185 50S ribosomal protein L7/L12	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      CCO03_09115 50S ribosomal protein L9	K02939 RP-L9; large subunit ribosomal protein L9
D      CCO03_19190 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      CCO03_19200 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      CCO03_02245 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      CCO03_18500 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      CCO03_18455 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      CCO03_01055 50S ribosomal protein L16	K02878 RP-L16; large subunit ribosomal protein L16
D      CCO03_18420 50S ribosomal protein L17	K02879 RP-L17; large subunit ribosomal protein L17
D      CCO03_18470 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      CCO03_14070 50S ribosomal protein L19	K02884 RP-L19; large subunit ribosomal protein L19
D      CCO03_06310 50S ribosomal protein L20	K02887 RP-L20; large subunit ribosomal protein L20
D      CCO03_15680 50S ribosomal protein L21	K02888 RP-L21; large subunit ribosomal protein L21
D      CCO03_01045 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      CCO03_01030 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      CCO03_18495 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      CCO03_16550 50S ribosomal protein L25/general stress protein Ctc	K02897 RP-L25; large subunit ribosomal protein L25
D      CCO03_15675 50S ribosomal protein L27	K02899 RP-L27; large subunit ribosomal protein L27
D      CCO03_15530 50S ribosomal protein L28	K02902 RP-L28; large subunit ribosomal protein L28
D      CCO03_01060 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      CCO03_18460 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      CCO03_06285 50S ribosomal protein L31	K02909 RP-L31; large subunit ribosomal protein L31
D      CCO03_03315 50S ribosomal protein L32	K02911 RP-L32; large subunit ribosomal protein L32
D      CCO03_15535 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      CCO03_00205 50S ribosomal protein L34	K02914 RP-L34; large subunit ribosomal protein L34
D      CCO03_06305 50S ribosomal protein L35	K02916 RP-L35; large subunit ribosomal protein L35
D      CCO03_18445 50S ribosomal protein L36	K02919 RP-L36; large subunit ribosomal protein L36
D      CCO03_05615 hypothetical protein	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D      CCO03_18170 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18195 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18220 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18245 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18155 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18180 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18205 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18230 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18150 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18175 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18200 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18225 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
C    00970 Aminoacyl-tRNA biosynthesis [PATH:cser00970]
D      CCO03_15085 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_18160 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_11240 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_15100 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_18185 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_18210 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_18235 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_10290 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_02505 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_03405 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_11210 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_08545 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_16635 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_04485 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      CCO03_04475 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      CCO03_15075 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      CCO03_15090 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      CCO03_03720 tRNA-Cys	K14222 tRNA-Cys; tRNA Cys
D      CCO03_16540 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      CCO03_15080 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      CCO03_15095 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      CCO03_03715 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_05350 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_03725 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_18400 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_19230 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_07955 tRNA-His	K14226 tRNA-His; tRNA His
D      CCO03_18165 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      CCO03_18190 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      CCO03_18215 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      CCO03_18240 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      CCO03_04990 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_03690 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_15200 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_15205 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_15210 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_04940 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_03835 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_14570 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      CCO03_09400 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      CCO03_18415 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      CCO03_15640 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      CCO03_16430 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      CCO03_19145 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      CCO03_06335 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      CCO03_07755 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      CCO03_15690 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      CCO03_13390 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      CCO03_10705 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      CCO03_04040 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      CCO03_15865 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      CCO03_19225 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      CCO03_14935 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      CCO03_19215 tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      CCO03_19235 tRNA-Tyr	K14236 tRNA-Tyr; tRNA Tyr
D      CCO03_13115 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      CCO03_14160 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      CCO03_07940 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      CCO03_13120 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      CCO03_15105 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      CCO03_03515 amidase	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      CCO03_04225 amidase	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      CCO03_14400 amidase	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      CCO03_01520 aspartyl/glutamyl-tRNA amidotransferase subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      CCO03_01510 glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit B	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      CCO03_01525 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      CCO03_11320 glutamine--tRNA ligase	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      CCO03_14875 alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      CCO03_13735 aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      CCO03_02310 glycine--tRNA ligase subunit alpha	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      CCO03_02300 glycine--tRNA ligase subunit beta	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      CCO03_06295 threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      CCO03_06895 serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      CCO03_07205 cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      CCO03_07925 methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      CCO03_18550 methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      CCO03_12130 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      CCO03_02060 leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      CCO03_08995 isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      CCO03_05580 lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      CCO03_18935 arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      CCO03_15650 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      CCO03_13580 histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      CCO03_06315 phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      CCO03_06320 phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      CCO03_18265 tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      CCO03_04205 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C    03013 Nucleocytoplasmic transport
C    03015 mRNA surveillance pathway
C    03008 Ribosome biogenesis in eukaryotes
B
B  09123 Folding, sorting and degradation
C    03060 Protein export [PATH:cser03060]
D      CCO03_18450 preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      CCO03_19210 preprotein translocase subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      CCO03_04985 preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      CCO03_18585 protein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      CCO03_18580 protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      CCO03_18590 preprotein translocase subunit YajC	K03210 yajC; preprotein translocase subunit YajC
D      CCO03_00190 membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      CCO03_15820 preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      CCO03_15355 protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      CCO03_15700 signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      CCO03_09725 ffs; signal recognition particle sRNA small type	K01983 ffs; SRP RNA
D      CCO03_14145 signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      CCO03_05180 twin-arginine translocase subunit TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      CCO03_05185 tatB; twin-arginine translocase subunit TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      CCO03_05190 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      CCO03_03375 signal peptidase I	K03100 lepB; signal peptidase I [EC:3.4.21.89]
D      CCO03_08990 signal peptidase II	K03101 lspA; signal peptidase II [EC:3.4.23.36]
C    04141 Protein processing in endoplasmic reticulum
C    04130 SNARE interactions in vesicular transport
C    04120 Ubiquitin mediated proteolysis
C    04122 Sulfur relay system [PATH:cser04122]
D      CCO03_13160 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      CCO03_07820 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      CCO03_11415 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      CCO03_09540 hypothetical protein	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      CCO03_18140 tRNA 2-thiouridine(34) synthase MnmA	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      CCO03_10170 cyclic pyranopterin phosphate synthase	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      CCO03_02470 hypothetical protein	K03636 moaD; sulfur-carrier protein
D      CCO03_15380 molybdopterin biosynthesis protein MoeB	K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D      CCO03_16310 cyclic pyranopterin monophosphate synthase MoaC	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      CCO03_12420 molybdopterin adenylyltransferase	K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D      CCO03_14050 thiamine biosynthesis protein ThiS	K03154 thiS; sulfur carrier protein
C    03050 Proteasome
C    03018 RNA degradation [PATH:cser03018]
D      CCO03_15655 RNA pyrophosphohydrolase	K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D      CCO03_15495 ribonuclease E/G	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      CCO03_11165 phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      CCO03_04970 polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D      CCO03_07780 RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      CCO03_11600 ATP-dependent RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      CCO03_04800 RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      CCO03_15195 ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      CCO03_00495 ATP-dependent DNA helicase RecQ	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      CCO03_09715 transcription termination factor Rho	K03628 rho; transcription termination factor Rho
D      CCO03_04390 molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      CCO03_07510 chaperonin GroL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      CCO03_12435 RNA chaperone Hfq	K03666 hfq; host factor-I protein
D      CCO03_12315 polyphosphate kinase 2	K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D      CCO03_04195 poly(A) polymerase	K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B  09124 Replication and repair
C    03030 DNA replication [PATH:cser03030]
D      CCO03_08610 hypothetical protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_13125 DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_14505 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      CCO03_09735 hypothetical protein	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      CCO03_12825 DNA polymerase III subunit delta'	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      CCO03_02070 DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      CCO03_12795 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      CCO03_00045 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      CCO03_09120 replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      CCO03_08630 hypothetical protein	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      CCO03_12860 DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      CCO03_17460 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_08500 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_09770 ribonuclease HI	K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D      CCO03_14775 ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      CCO03_10255 DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      CCO03_13870 ligA; DNA ligase (NAD(+)) LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03410 Base excision repair [PATH:cser03410]
D      CCO03_14670 endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      CCO03_19240 uracil-DNA glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D      CCO03_16510 A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      CCO03_16520 DNA-formamidopyrimidine glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      CCO03_07210 DNA-3-methyladenine glycosylase	K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D      CCO03_06550 3-methyladenine DNA glycosylase	K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D      CCO03_01125 hypothetical protein	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      CCO03_04955 exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      CCO03_00690 exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      CCO03_10255 DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      CCO03_05565 single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      CCO03_13870 ligA; DNA ligase (NAD(+)) LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03420 Nucleotide excision repair [PATH:cser03420]
D      CCO03_14360 transcription-repair coupling factor	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D      CCO03_17480 excinuclease ABC subunit A	K03701 uvrA; excinuclease ABC subunit A
D      CCO03_13840 excinuclease ABC subunit B	K03702 uvrB; excinuclease ABC subunit B
D      CCO03_08300 excinuclease ABC subunit C	K03703 uvrC; excinuclease ABC subunit C
D      CCO03_07735 DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      CCO03_10255 DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      CCO03_13870 ligA; DNA ligase (NAD(+)) LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      CCO03_16040 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C    03430 Mismatch repair [PATH:cser03430]
D      CCO03_08920 DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS
D      CCO03_06070 DNA mismatch repair protein MutL	K03572 mutL; DNA mismatch repair protein MutL
D      CCO03_07735 DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      CCO03_10345 exodeoxyribonuclease I	K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D      CCO03_10760 exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      CCO03_11400 exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      CCO03_05565 single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      CCO03_17460 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_08500 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_14505 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      CCO03_00045 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      CCO03_09735 hypothetical protein	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      CCO03_02070 DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      CCO03_12825 DNA polymerase III subunit delta'	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      CCO03_08610 hypothetical protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_13125 DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_12795 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      CCO03_13870 ligA; DNA ligase (NAD(+)) LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03440 Homologous recombination [PATH:cser03440]
D      CCO03_05565 single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      CCO03_17460 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_08500 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_03395 DNA repair protein RecO	K03584 recO; DNA repair protein RecO (recombination protein O)
D      CCO03_09745 recombination protein RecR	K06187 recR; recombination protein RecR
D      CCO03_19260 recombinase RecA	K03553 recA; recombination protein RecA
D      CCO03_10255 DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      CCO03_03290 Holliday junction branch migration protein RuvA	K03550 ruvA; holliday junction DNA helicase RuvA
D      CCO03_16725 Holliday junction branch migration DNA helicase RuvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      CCO03_03050 crossover junction endodeoxyribonuclease RuvC	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D      CCO03_18360 ATP-dependent DNA helicase RecG	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D      CCO03_11450 exodeoxyribonuclease V subunit beta	K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D      CCO03_11445 exodeoxyribonuclease V subunit alpha	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      CCO03_14505 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      CCO03_00045 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      CCO03_09735 hypothetical protein	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      CCO03_02070 DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      CCO03_12825 DNA polymerase III subunit delta'	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      CCO03_08610 hypothetical protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_13125 DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_12795 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      CCO03_18645 primosomal protein N'	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D      CCO03_09105 primosomal replication protein N	K02686 priB; primosomal replication protein N
C    03450 Non-homologous end-joining
D      CCO03_00980 hypothetical protein	K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C    03460 Fanconi anemia pathway
B
B  09126 Chromosome
C    03082 ATP-dependent chromatin remodeling
C    03083 Polycomb repressive complex
B
B  09125 Information processing in viruses
C    03230 Viral genome structure
C    03240 Viral replication
C    03250 Viral life cycle - HIV-1 [PATH:cser03250]
D      CCO03_07195 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C    03260 Virion - Human immunodeficiency virus
C    03271 Virion - Rotavirus
C    03262 Virion - Coronavirus
C    03261 Virion - Influenza virus
C    03263 Virion - Enterovirus
C    03264 Virion - Flavivirus
C    03265 Virion - Ebolavirus and Lyssavirus
C    03266 Virion - Herpesvirus
C    03268 Virion - Orthopoxvirus
C    03267 Virion - Adenovirus
C    03259 Virion - Bacteriophages T4 and T7
C    03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B  09131 Membrane transport
C    02010 ABC transporters [PATH:cser02010]
D      CCO03_16605 thiosulfate transporter subunit	K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D      CCO03_07150 sulfate transporter subunit	K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D      CCO03_16600 sulfate ABC transporter permease subunit CysT	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      CCO03_16595 sulfate ABC transporter permease subunit CysW	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      CCO03_16590 sulfate ABC transporter ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      CCO03_16085 ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      CCO03_16090 sulfonate ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      CCO03_16095 hypothetical protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      CCO03_02450 molybdate ABC transporter substrate-binding protein	K02020 modA; molybdate transport system substrate-binding protein
D      CCO03_02455 molybdenum ABC transporter permease subunit	K02018 modB; molybdate transport system permease protein
D      CCO03_02460 hypothetical protein	K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D      CCO03_13055 Fe(3+) ABC transporter substrate-binding protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      CCO03_10280 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      CCO03_10275 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      CCO03_02565 glycine betaine ABC transporter substrate-binding protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      CCO03_02570 glycine betaine ABC transporter substrate-binding protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      CCO03_02575 proline/betaine ABC transporter permease ProW	K02001 proW; glycine betaine/proline transport system permease protein
D      CCO03_02580 glycine betaine/L-proline ABC transporter ATP-binding protein	K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D      CCO03_03630 hypothetical protein	K07323 mlaC; phospholipid transport system substrate-binding protein
D      CCO03_03620 outer membrane lipid asymmetry maintenance protein MlaD	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      CCO03_00595 hypothetical protein	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      CCO03_10265 mammalian cell entry protein	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      CCO03_03615 ABC transporter permease	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      CCO03_00585 ABC transporter permease	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      CCO03_10260 hypothetical protein	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      CCO03_03635 hypothetical protein	K07122 mlaB; phospholipid transport system transporter-binding protein
D      CCO03_03610 ABC transporter ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      CCO03_00590 ABC transporter ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      CCO03_01550 BMP family ABC transporter substrate-binding protein	K07335 bmpA; basic membrane protein A and related proteins
D      CCO03_11265 BMP family ABC transporter substrate-binding protein	K07335 bmpA; basic membrane protein A and related proteins
D      CCO03_06085 phosphate ABC transporter substrate-binding protein PstS	K02040 pstS; phosphate transport system substrate-binding protein
D      CCO03_06090 phosphate ABC transporter permease subunit PstC	K02037 pstC; phosphate transport system permease protein
D      CCO03_06095 phosphate ABC transporter, permease protein PstA	K02038 pstA; phosphate transport system permease protein
D      CCO03_06100 phosphate ABC transporter ATP-binding protein	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      CCO03_10320 phosphonate ABC transporter substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      CCO03_10330 phosphonate ABC transporter, permease protein PhnE	K02042 phnE; phosphonate transport system permease protein
D      CCO03_10325 phosphonate ABC transporter ATP-binding protein	K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D      CCO03_16670 amino acid ABC transporter substrate-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      CCO03_14460 amino acid ABC transporter substrate-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      CCO03_16660 amino acid ABC transporter permease	K10002 gltK; glutamate/aspartate transport system permease protein
D      CCO03_16665 glutamate ABC transporter permease	K10003 gltJ; glutamate/aspartate transport system permease protein
D      CCO03_16655 amino acid ABC transporter ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      CCO03_05400 amino acid ABC transporter substrate-binding protein	K09969 aapJ; general L-amino acid transport system substrate-binding protein
D      CCO03_05395 amino acid ABC transporter permease	K09970 aapQ; general L-amino acid transport system permease protein
D      CCO03_05390 amino acid ABC transporter permease	K09971 aapM; general L-amino acid transport system permease protein
D      CCO03_07970 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11800 leucine ABC transporter subunit substrate-binding protein LivK	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_17660 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_00345 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_09465 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_04065 branched chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_04145 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_01665 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_01760 amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11610 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11640 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11620 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_11805 branched-chain amino acid ABC transporter permease LivH	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_17655 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_00340 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_09475 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_12080 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_04070 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_04150 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_11615 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_11810 livM; high-affinity branched-chain amino acid ABC transporter permease LivM	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_12075 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_17650 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_04075 ABC transporter ATP-binding protein	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_04155 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_00335 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_09470 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_11630 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11815 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_17645 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_00330 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_09480 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_12070 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04080 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04135 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11625 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11820 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_12065 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_17640 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04085 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04140 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_00325 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_09460 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_16650 methionine ABC transporter substrate-binding protein	K02073 metQ; D-methionine transport system substrate-binding protein
D      CCO03_07230 DL-methionine transporter permease subunit	K02072 metI; D-methionine transport system permease protein
D      CCO03_07225 phosphate ABC transporter ATP-binding protein	K02071 metN; D-methionine transport system ATP-binding protein
D      CCO03_01770 urea ABC transporter substrate-binding protein	K11959 urtA; urea transport system substrate-binding protein
D      CCO03_01870 urea ABC transporter substrate-binding protein	K11959 urtA; urea transport system substrate-binding protein
D      CCO03_01865 urea ABC transporter permease subunit UrtB	K11960 urtB; urea transport system permease protein
D      CCO03_01860 urea ABC transporter permease subunit UrtC	K11961 urtC; urea transport system permease protein
D      CCO03_01855 urea ABC transporter ATP-binding protein UrtD	K11962 urtD; urea transport system ATP-binding protein
D      CCO03_01850 urea ABC transporter ATP-binding subunit UrtE	K11963 urtE; urea transport system ATP-binding protein
D      CCO03_12280 ABC transporter substrate-binding protein	K13893 yejA; microcin C transport system substrate-binding protein
D      CCO03_12275 microcin ABC transporter permease	K13894 yejB; microcin C transport system permease protein
D      CCO03_12270 peptide ABC transporter permease	K13895 yejE; microcin C transport system permease protein
D      CCO03_12265 microcin ABC transporter ATP-binding protein	K13896 yejF; microcin C transport system ATP-binding protein
D      CCO03_00850 cobalt transporter	K10094 cbiK; nickel transport protein
D      CCO03_17325 hypothetical protein	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      CCO03_17845 ABC transporter	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      CCO03_17940 sugar ABC transporter permease	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      CCO03_02155 ABC transporter	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      CCO03_17935 ABC transporter ATP-binding protein	K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D      CCO03_02150 sugar ABC transporter ATP-binding protein	K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D      CCO03_17840 ABC transporter	K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D      CCO03_06720 lipoprotein-releasing system transmembrane subunit LolC	K09808 lolC_E; lipoprotein-releasing system permease protein
D      CCO03_06725 lipoprotein-releasing system ATP-binding protein LolD	K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D      CCO03_12805 LPS export ABC transporter permease LptF	K07091 lptF; lipopolysaccharide export system permease protein
D      CCO03_12810 LPS export ABC transporter permease LptG	K11720 lptG; lipopolysaccharide export system permease protein
D      CCO03_18915 LPS export ABC transporter ATP-binding protein	K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D      CCO03_09375 lipid A export permease/ATP-binding protein MsbA	K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D      CCO03_14270 multidrug ABC transporter ATP-binding protein	K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
C    02060 Phosphotransferase system (PTS) [PATH:cser02060]
D      CCO03_00490 phosphoenolpyruvate--protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      CCO03_01090 phosphocarrier protein HPr	K02784 ptsH; phosphocarrier protein HPr
D      CCO03_01085 PTS fructose transporter subunit IIA	K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D      CCO03_02015 PTS sugar transporter subunit IIA	K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C    03070 Bacterial secretion system [PATH:cser03070]
D      CCO03_12550 hypothetical protein	K12340 tolC; outer membrane protein
D      CCO03_18080 type II secretion system protein GspD	K02453 gspD; general secretion pathway protein D
D      CCO03_17865 hypothetical protein	K02453 gspD; general secretion pathway protein D
D      CCO03_17915 type II secretion system protein F	K02455 gspF; general secretion pathway protein F
D      CCO03_07005 type II secretion system protein GspF	K02455 gspF; general secretion pathway protein F
D      CCO03_18120 type II secretion system protein GspG	K02456 gspG; general secretion pathway protein G
D      CCO03_17910 type II secretion system protein GspG	K02456 gspG; general secretion pathway protein G
D      CCO03_18285 hypothetical protein	K02456 gspG; general secretion pathway protein G
D      CCO03_18115 type II secretion system protein GspH	K02457 gspH; general secretion pathway protein H
D      CCO03_17905 type II secretion system protein GspH	K02457 gspH; general secretion pathway protein H
D      CCO03_18110 type II secretion system protein GspI	K02458 gspI; general secretion pathway protein I
D      CCO03_17900 hypothetical protein	K02458 gspI; general secretion pathway protein I
D      CCO03_18105 hypothetical protein	K02459 gspJ; general secretion pathway protein J
D      CCO03_17895 hypothetical protein	K02459 gspJ; general secretion pathway protein J
D      CCO03_18100 hypothetical protein	K02460 gspK; general secretion pathway protein K
D      CCO03_17890 hypothetical protein	K02460 gspK; general secretion pathway protein K
D      CCO03_18095 hypothetical protein	K02461 gspL; general secretion pathway protein L
D      CCO03_18090 hypothetical protein	K02462 gspM; general secretion pathway protein M
D      CCO03_18075 type II secretion system protein GspE	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      CCO03_17920 type II secretion system protein GspE	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      CCO03_06780 type II secretion system protein E	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      CCO03_18585 protein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      CCO03_18580 protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      CCO03_19210 preprotein translocase subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      CCO03_04985 preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      CCO03_18450 preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      CCO03_18590 preprotein translocase subunit YajC	K03210 yajC; preprotein translocase subunit YajC
D      CCO03_00190 membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      CCO03_15820 preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      CCO03_14145 signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      CCO03_15355 protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      CCO03_15700 signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      CCO03_05180 twin-arginine translocase subunit TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      CCO03_05185 tatB; twin-arginine translocase subunit TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      CCO03_05190 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
B
B  09132 Signal transduction
C    02020 Two-component system [PATH:cser02020]
D      CCO03_06115 hypothetical protein	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      CCO03_06110 phosphate regulon transcriptional regulatory protein PhoB	K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D      CCO03_06085 phosphate ABC transporter substrate-binding protein PstS	K02040 pstS; phosphate transport system substrate-binding protein
D      CCO03_04570 acid phosphatase	K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D      CCO03_14210 two-component sensor histidine kinase	K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D      CCO03_14205 two-component system response regulator OmpR	K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D      CCO03_19015 two-component sensor histidine kinase	K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D      CCO03_03365 serine peptidase	K04771 degP; serine protease Do [EC:3.4.21.107]
D      CCO03_07910 peptidase	K04771 degP; serine protease Do [EC:3.4.21.107]
D      CCO03_00540 two-component system sensor histidine kinase CreC	K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D      CCO03_00535 two-component system response regulator CreB	K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D      CCO03_07710 hypothetical protein	K07799 mdtA; membrane fusion protein, multidrug efflux system
D      CCO03_07715 multidrug transporter subunit MdtC	K07788 mdtB; multidrug efflux pump
D      CCO03_07720 nodulation protein	K07789 mdtC; multidrug efflux pump
D      CCO03_04855 hypothetical protein	K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D      CCO03_04860 DNA-binding response regulator	K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D      CCO03_16455 histidine kinase	K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D      CCO03_16450 DNA-binding response regulator	K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D      CCO03_16470 potassium-transporting ATPase subunit KdpA	K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D      CCO03_16460 potassium-transporting ATPase subunit C	K01548 kdpC; potassium-transporting ATPase KdpC subunit
D      CCO03_16740 hypothetical protein	K07793 tctA; putative tricarboxylic transport membrane protein
D      CCO03_06790 hypothetical protein	K07793 tctA; putative tricarboxylic transport membrane protein
D      CCO03_05775 heme A synthase	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      CCO03_00005 chromosomal replication initiation protein DnaA	K02313 dnaA; chromosomal replication initiator protein
D      CCO03_12895 hypothetical protein	K19611 fepA; ferric enterobactin receptor
D      CCO03_14410 CoA ester lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      CCO03_15950 CoA ester lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      CCO03_11710 hypothetical protein	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      CCO03_11705 DNA-binding response regulator	K08083 algR; two-component system, LytTR family, response regulator AlgR
D      CCO03_13350 DNA-binding response regulator	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      CCO03_06440 Flp family type IVb pilin	K02651 flp; pilus assembly protein Flp/PilA
D      CCO03_06430 Flp pilus assembly protein CpaB	K02279 cpaB; pilus assembly protein CpaB
D      CCO03_06425 type II and III secretion system protein	K02280 cpaC; pilus assembly protein CpaC
D      CCO03_06420 hypothetical protein	K02282 cpaE; pilus assembly protein CpaE
D      CCO03_06415 pilus assembly protein CpaF	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      CCO03_06410 secretion system protein	K12510 tadB; tight adherence protein B
D      CCO03_06405 secretion system protein	K12511 tadC; tight adherence protein C
D      CCO03_06400 hypothetical protein	K27079 tadD; tight adherence protein D
D      CCO03_06380 hypothetical protein	K27080 tadG; tight adherence protein G
D      CCO03_04500 [protein-PII] uridylyltransferase	K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D      CCO03_10900 transcriptional regulator	K04751 glnB; nitrogen regulatory protein P-II 1
D      CCO03_04915 PAS domain-containing sensor histidine kinase	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      CCO03_04920 nitrogen regulation protein NR(I)	K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D      CCO03_04905 type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      CCO03_19150 two-component system response regulator	K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_15715 hypothetical protein	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      CCO03_15720 sigma-54-dependent Fis family transcriptional regulator	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      CCO03_18910 RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor
D      CCO03_18970 hypothetical protein	K02650 pilA; type IV pilus assembly protein PilA
D      CCO03_18975 prepilin-type cleavage/methylation domain-containing protein	K02650 pilA; type IV pilus assembly protein PilA
D      CCO03_11725 chemotaxis protein	K02660 pilJ; twitching motility protein PilJ
D      CCO03_11730 hypothetical protein	K02659 pilI; twitching motility protein PilI
D      CCO03_11720 hypothetical protein	K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D      CCO03_11740 two-component system response regulator	K02657 pilG; twitching motility two-component system response regulator PilG
D      CCO03_11735 two-component system response regulator	K02658 pilH; twitching motility two-component system response regulator PilH
D      CCO03_02640 hypothetical protein	K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D      CCO03_02645 DNA-binding response regulator	K11712 dctR; two-component system, LuxR family, response regulator DctR
D      CCO03_05105 C4-dicarboxylate ABC transporter	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      CCO03_16655 amino acid ABC transporter ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      CCO03_16660 amino acid ABC transporter permease	K10002 gltK; glutamate/aspartate transport system permease protein
D      CCO03_16665 glutamate ABC transporter permease	K10003 gltJ; glutamate/aspartate transport system permease protein
D      CCO03_16670 amino acid ABC transporter substrate-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      CCO03_14460 amino acid ABC transporter substrate-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      CCO03_11225 L-asparaginase	K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D      CCO03_09920 Crp/Fnr family transcriptional regulator	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_01415 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_05890 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_15520 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_12010 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_00170 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_09490 Crp/Fnr family transcriptional regulator	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_02430 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_04925 glutaminase	K01425 glsA; glutaminase [EC:3.5.1.2]
D      CCO03_10790 histidine kinase	K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D      CCO03_10795 two-component system response regulator	K15012 regA; two-component system, response regulator RegA
D      CCO03_15890 ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D      CCO03_15885 cytochrome b	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      CCO03_15880 cytochrome c1	K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D      CCO03_11000 cytochrome C'	K08738 CYC; cytochrome c
D      CCO03_13270 cytochrome d terminal oxidase subunit 1	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      CCO03_13275 cytochrome d ubiquinol oxidase subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      CCO03_13280 cytochrome bd-I oxidase subunit CydX	K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D      CCO03_12550 hypothetical protein	K12340 tolC; outer membrane protein
D      CCO03_00455 hypothetical protein	K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D      CCO03_11905 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      CCO03_19330 RNA polymerase subunit sigma	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D      CCO03_07895 RNA polymerase subunit sigma	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D      CCO03_07900 iron dicitrate transport regulator FecR	K07165 fecR; transmembrane sensor
D      CCO03_19325 iron dicitrate transport regulator FecR	K07165 fecR; transmembrane sensor
C    04010 MAPK signaling pathway
C    04013 MAPK signaling pathway - fly
C    04016 MAPK signaling pathway - plant
C    04011 MAPK signaling pathway - yeast
C    04012 ErbB signaling pathway
C    04014 Ras signaling pathway
C    04015 Rap1 signaling pathway
C    04310 Wnt signaling pathway
C    04330 Notch signaling pathway
C    04340 Hedgehog signaling pathway
C    04341 Hedgehog signaling pathway - fly
C    04350 TGF-beta signaling pathway
C    04390 Hippo signaling pathway
C    04391 Hippo signaling pathway - fly
C    04392 Hippo signaling pathway - multiple species
C    04370 VEGF signaling pathway
C    04371 Apelin signaling pathway
C    04630 JAK-STAT signaling pathway
C    04064 NF-kappa B signaling pathway
C    04668 TNF signaling pathway
C    04066 HIF-1 signaling pathway
C    04068 FoxO signaling pathway
C    04020 Calcium signaling pathway
C    04070 Phosphatidylinositol signaling system
C    04072 Phospholipase D signaling pathway
C    04071 Sphingolipid signaling pathway
C    04024 cAMP signaling pathway
C    04022 cGMP-PKG signaling pathway
C    04151 PI3K-Akt signaling pathway
C    04152 AMPK signaling pathway
C    04150 mTOR signaling pathway
C    04075 Plant hormone signal transduction
B
B  09133 Signaling molecules and interaction
C    04080 Neuroactive ligand-receptor interaction
C    04060 Cytokine-cytokine receptor interaction
C    04061 Viral protein interaction with cytokine and cytokine receptor
C    04512 ECM-receptor interaction
C    04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B  09141 Transport and catabolism
C    04144 Endocytosis
C    04145 Phagosome
C    04142 Lysosome
C    04146 Peroxisome
C    04140 Autophagy - animal
C    04138 Autophagy - yeast
C    04136 Autophagy - other
C    04137 Mitophagy - animal
C    04139 Mitophagy - yeast
C    04148 Efferocytosis [PATH:cser04148]
D      CCO03_00460 arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      CCO03_15890 ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B  09143 Cell growth and death
C    04110 Cell cycle
C    04111 Cell cycle - yeast
C    04112 Cell cycle - Caulobacter
C    04113 Meiosis - yeast
C    04114 Oocyte meiosis
C    04210 Apoptosis
C    04214 Apoptosis - fly
C    04215 Apoptosis - multiple species
C    04216 Ferroptosis
C    04217 Necroptosis
C    04115 p53 signaling pathway
C    04218 Cellular senescence
B
B  09144 Cellular community - eukaryotes
C    04510 Focal adhesion
C    04520 Adherens junction
C    04530 Tight junction
C    04540 Gap junction
C    04550 Signaling pathways regulating pluripotency of stem cells
B
B  09145 Cellular community - prokaryotes
C    02024 Quorum sensing [PATH:cser02024]
D      CCO03_12435 RNA chaperone Hfq	K03666 hfq; host factor-I protein
D      CCO03_02670 anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      CCO03_02675 anthranilate/aminodeoxychorismate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      CCO03_00255 3-deoxy-7-phosphoheptulonate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      CCO03_03140 3-deoxy-7-phosphoheptulonate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      CCO03_16450 DNA-binding response regulator	K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D      CCO03_07970 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11800 leucine ABC transporter subunit substrate-binding protein LivK	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_17660 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_00345 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_09465 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_04065 branched chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_04145 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_01665 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_01760 amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11610 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11640 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11620 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_11805 branched-chain amino acid ABC transporter permease LivH	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_17655 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_00340 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_09475 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_12080 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_04070 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_04150 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_11615 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_11810 livM; high-affinity branched-chain amino acid ABC transporter permease LivM	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_12075 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_17650 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_04075 ABC transporter ATP-binding protein	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_04155 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_00335 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_09470 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_11630 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11815 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_17645 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_00330 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_09480 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_12070 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04080 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04135 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11625 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11820 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_12065 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_17640 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04085 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04140 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_00325 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_09460 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_03820 hypothetical protein	K20276 bapA; large repetitive protein
D      CCO03_13450 hypothetical protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09485 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_12060 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_06145 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_03865 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09225 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09920 Crp/Fnr family transcriptional regulator	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_01415 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_05890 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_15520 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_12010 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_00170 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_09490 Crp/Fnr family transcriptional regulator	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_02430 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_06050 riboflavin biosynthesis protein RibD	K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D      CCO03_04005 multidrug transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_02525 multidrug transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_16580 hypothetical protein	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_01980 transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_09995 hypothetical protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_13420 hypothetical protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_09195 peptide ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_09200 peptide ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_09205 peptide ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_04230 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_10000 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      CCO03_13415 peptide ABC transporter	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      CCO03_09185 glutathione ABC transporter permease GsiC	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      CCO03_04270 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      CCO03_10005 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      CCO03_09190 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      CCO03_04265 peptide ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      CCO03_10010 hypothetical protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      CCO03_13405 hypothetical protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      CCO03_09210 glutathione ABC transporter ATP-binding protein GsiA	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      CCO03_04260 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      CCO03_00190 membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      CCO03_19210 preprotein translocase subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      CCO03_04985 preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      CCO03_18450 preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      CCO03_18590 preprotein translocase subunit YajC	K03210 yajC; preprotein translocase subunit YajC
D      CCO03_15820 preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      CCO03_14145 signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      CCO03_15355 protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      CCO03_15700 signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C    05111 Biofilm formation - Vibrio cholerae
C    02025 Biofilm formation - Pseudomonas aeruginosa
C    02026 Biofilm formation - Escherichia coli
B
B  09142 Cell motility
C    02030 Bacterial chemotaxis
C    02040 Flagellar assembly [PATH:cser02040]
D      CCO03_12870 RNA polymerase sigma factor RpoD	K03086 rpoD; RNA polymerase primary sigma factor
D      CCO03_18910 RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor
C    04814 Motor proteins
C    04820 Cytoskeleton in muscle cells
D      CCO03_11165 phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C    04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B  09151 Immune system
C    04640 Hematopoietic cell lineage
C    04610 Complement and coagulation cascades
C    04611 Platelet activation
C    04613 Neutrophil extracellular trap formation
C    04620 Toll-like receptor signaling pathway
C    04624 Toll and Imd signaling pathway
C    04621 NOD-like receptor signaling pathway
C    04622 RIG-I-like receptor signaling pathway
C    04623 Cytosolic DNA-sensing pathway
C    04625 C-type lectin receptor signaling pathway
C    04650 Natural killer cell mediated cytotoxicity
C    04612 Antigen processing and presentation
C    04660 T cell receptor signaling pathway
C    04658 Th1 and Th2 cell differentiation
C    04659 Th17 cell differentiation
C    04657 IL-17 signaling pathway
C    04662 B cell receptor signaling pathway
C    04664 Fc epsilon RI signaling pathway
C    04666 Fc gamma R-mediated phagocytosis
C    04670 Leukocyte transendothelial migration
C    04672 Intestinal immune network for IgA production
C    04062 Chemokine signaling pathway
B
B  09152 Endocrine system
C    04911 Insulin secretion
C    04910 Insulin signaling pathway
C    04922 Glucagon signaling pathway
C    04923 Regulation of lipolysis in adipocytes
C    04920 Adipocytokine signaling pathway
C    03320 PPAR signaling pathway
C    04929 GnRH secretion
C    04912 GnRH signaling pathway
C    04913 Ovarian steroidogenesis
C    04915 Estrogen signaling pathway
C    04914 Progesterone-mediated oocyte maturation
C    04917 Prolactin signaling pathway
C    04921 Oxytocin signaling pathway
C    04926 Relaxin signaling pathway
C    04935 Growth hormone synthesis, secretion and action
C    04918 Thyroid hormone synthesis
C    04919 Thyroid hormone signaling pathway
C    04928 Parathyroid hormone synthesis, secretion and action
C    04916 Melanogenesis
C    04924 Renin secretion
C    04614 Renin-angiotensin system
C    04925 Aldosterone synthesis and secretion
C    04927 Cortisol synthesis and secretion
B
B  09153 Circulatory system
C    04260 Cardiac muscle contraction
C    04261 Adrenergic signaling in cardiomyocytes
C    04270 Vascular smooth muscle contraction
B
B  09154 Digestive system
C    04970 Salivary secretion
C    04971 Gastric acid secretion
C    04972 Pancreatic secretion
C    04976 Bile secretion
C    04973 Carbohydrate digestion and absorption
C    04974 Protein digestion and absorption
C    04975 Fat digestion and absorption
C    04979 Cholesterol metabolism
C    04977 Vitamin digestion and absorption
C    04980 Cobalamin transport and metabolism [PATH:cser04980]
D      CCO03_00745 ATP:cob(I)alamin adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      CCO03_08205 methylmalonyl Co-A mutase-associated GTPase MeaB	K07588 MMAA; GTPase [EC:3.6.5.-]
D      CCO03_08200 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      CCO03_04720 methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C    04978 Mineral absorption
B
B  09155 Excretory system
C    04962 Vasopressin-regulated water reabsorption
C    04960 Aldosterone-regulated sodium reabsorption
C    04961 Endocrine and other factor-regulated calcium reabsorption
C    04964 Proximal tubule bicarbonate reclamation
C    04966 Collecting duct acid secretion
B
B  09156 Nervous system
C    04724 Glutamatergic synapse
C    04727 GABAergic synapse
C    04725 Cholinergic synapse
C    04728 Dopaminergic synapse
C    04726 Serotonergic synapse
C    04720 Long-term potentiation
C    04730 Long-term depression
C    04723 Retrograde endocannabinoid signaling
C    04721 Synaptic vesicle cycle
C    04722 Neurotrophin signaling pathway
B
B  09157 Sensory system
C    04744 Phototransduction
C    04745 Phototransduction - fly
C    04740 Olfactory transduction
C    04742 Taste transduction
C    04750 Inflammatory mediator regulation of TRP channels
B
B  09158 Development and regeneration
C    04320 Dorso-ventral axis formation
C    04360 Axon guidance
C    04361 Axon regeneration
C    04380 Osteoclast differentiation
B
B  09149 Aging
C    04211 Longevity regulating pathway
C    04212 Longevity regulating pathway - worm
C    04213 Longevity regulating pathway - multiple species
B
B  09159 Environmental adaptation
C    04710 Circadian rhythm
C    04713 Circadian entrainment
C    04711 Circadian rhythm - fly
C    04712 Circadian rhythm - plant
C    04714 Thermogenesis
C    04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B  09161 Cancer: overview
C    05200 Pathways in cancer
C    05202 Transcriptional misregulation in cancer
C    05206 MicroRNAs in cancer
C    05205 Proteoglycans in cancer
C    05204 Chemical carcinogenesis - DNA adducts
C    05207 Chemical carcinogenesis - receptor activation
C    05208 Chemical carcinogenesis - reactive oxygen species
C    05203 Viral carcinogenesis
C    05230 Central carbon metabolism in cancer
C    05231 Choline metabolism in cancer
C    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B  09162 Cancer: specific types
C    05210 Colorectal cancer
C    05212 Pancreatic cancer
C    05225 Hepatocellular carcinoma
C    05226 Gastric cancer
C    05214 Glioma
C    05216 Thyroid cancer
C    05221 Acute myeloid leukemia
C    05220 Chronic myeloid leukemia
C    05217 Basal cell carcinoma
C    05218 Melanoma
C    05211 Renal cell carcinoma
C    05219 Bladder cancer
C    05215 Prostate cancer
C    05213 Endometrial cancer
C    05224 Breast cancer
C    05222 Small cell lung cancer
C    05223 Non-small cell lung cancer
B
B  09172 Infectious disease: viral
C    05166 Human T-cell leukemia virus 1 infection
C    05170 Human immunodeficiency virus 1 infection
C    05161 Hepatitis B
C    05160 Hepatitis C
C    05171 Coronavirus disease - COVID-19
C    05164 Influenza A
C    05162 Measles
C    05168 Herpes simplex virus 1 infection
C    05163 Human cytomegalovirus infection
C    05167 Kaposi sarcoma-associated herpesvirus infection
C    05169 Epstein-Barr virus infection
C    05165 Human papillomavirus infection
B
B  09171 Infectious disease: bacterial
C    05110 Vibrio cholerae infection
C    05120 Epithelial cell signaling in Helicobacter pylori infection
C    05130 Pathogenic Escherichia coli infection
C    05132 Salmonella infection
C    05131 Shigellosis
C    05135 Yersinia infection
C    05133 Pertussis
C    05134 Legionellosis
C    05150 Staphylococcus aureus infection
C    05152 Tuberculosis
C    05100 Bacterial invasion of epithelial cells
B
B  09174 Infectious disease: parasitic
C    05146 Amoebiasis
C    05144 Malaria
C    05145 Toxoplasmosis
C    05140 Leishmaniasis
C    05142 Chagas disease
C    05143 African trypanosomiasis
B
B  09163 Immune disease
C    05310 Asthma
C    05322 Systemic lupus erythematosus
C    05323 Rheumatoid arthritis
C    05320 Autoimmune thyroid disease
C    05321 Inflammatory bowel disease
C    05330 Allograft rejection
C    05332 Graft-versus-host disease
C    05340 Primary immunodeficiency
B
B  09164 Neurodegenerative disease
C    05010 Alzheimer disease
C    05012 Parkinson disease
C    05014 Amyotrophic lateral sclerosis
C    05016 Huntington disease
C    05017 Spinocerebellar ataxia
C    05020 Prion disease
C    05022 Pathways of neurodegeneration - multiple diseases
B
B  09165 Substance dependence
C    05030 Cocaine addiction
C    05031 Amphetamine addiction
C    05032 Morphine addiction
C    05033 Nicotine addiction
C    05034 Alcoholism
B
B  09166 Cardiovascular disease
C    05417 Lipid and atherosclerosis
C    05418 Fluid shear stress and atherosclerosis
C    05410 Hypertrophic cardiomyopathy
C    05412 Arrhythmogenic right ventricular cardiomyopathy
C    05414 Dilated cardiomyopathy
C    05415 Diabetic cardiomyopathy
C    05416 Viral myocarditis
B
B  09167 Endocrine and metabolic disease
C    04930 Type II diabetes mellitus
C    04940 Type I diabetes mellitus
C    04950 Maturity onset diabetes of the young
C    04936 Alcoholic liver disease
C    04932 Non-alcoholic fatty liver disease
C    04931 Insulin resistance
C    04933 AGE-RAGE signaling pathway in diabetic complications
C    04934 Cushing syndrome
B
B  09175 Drug resistance: antimicrobial
C    01501 beta-Lactam resistance [PATH:cser01501]
D      CCO03_06125 beta-N-acetylhexosaminidase	K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D      CCO03_12170 class A beta-lactamase	K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D      CCO03_02210 RNA ligase RtcB family protein	K18148 rtcB; release factor H-coupled RctB family protein
D      CCO03_01990 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_02515 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_02520 multidrug efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      CCO03_04005 multidrug transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_02525 multidrug transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_16580 hypothetical protein	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_01980 transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_12550 hypothetical protein	K12340 tolC; outer membrane protein
D      CCO03_10670 penicillin-binding protein	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      CCO03_16195 penicillin-binding protein	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      CCO03_01545 penicillin-binding protein 2	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      CCO03_17575 cell division protein	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C    01502 Vancomycin resistance [PATH:cser01502]
D      CCO03_17535 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      CCO03_19060 alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      CCO03_17565 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D      CCO03_17560 phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      CCO03_17545 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C    01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cser01503]
D      CCO03_07625 phosphoethanolamine transferase	K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D      CCO03_05530 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      CCO03_03365 serine peptidase	K04771 degP; serine protease Do [EC:3.4.21.107]
D      CCO03_07910 peptidase	K04771 degP; serine protease Do [EC:3.4.21.107]
D      CCO03_18925 hypothetical protein	K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D      CCO03_07195 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      CCO03_01990 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_02515 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_02520 multidrug efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      CCO03_12550 hypothetical protein	K12340 tolC; outer membrane protein
D      CCO03_14785 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B  09176 Drug resistance: antineoplastic
C    01521 EGFR tyrosine kinase inhibitor resistance
C    01524 Platinum drug resistance
C    01523 Antifolate resistance
C    01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B  09181 Protein families: metabolism
C    01000 Enzymes [BR:cser01000]
C    01001 Protein kinases [BR:cser01001]
D      CCO03_15310 regulator	K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D      CCO03_06115 hypothetical protein	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      CCO03_14210 two-component sensor histidine kinase	K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D      CCO03_19015 two-component sensor histidine kinase	K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D      CCO03_00540 two-component system sensor histidine kinase CreC	K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D      CCO03_04855 hypothetical protein	K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D      CCO03_16455 histidine kinase	K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D      CCO03_07890 hypothetical protein	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      CCO03_07615 hypothetical protein	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      CCO03_00870 histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      CCO03_15630 hypothetical protein	K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D      CCO03_11710 hypothetical protein	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      CCO03_04915 PAS domain-containing sensor histidine kinase	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      CCO03_15715 hypothetical protein	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      CCO03_01600 hypothetical protein	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      CCO03_11720 hypothetical protein	K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D      CCO03_02640 hypothetical protein	K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D      CCO03_10790 histidine kinase	K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C    01009 Protein phosphatases and associated proteins [BR:cser01009]
D      CCO03_18015 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      CCO03_18860 molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
D      CCO03_10735 serine/threonine protein phosphatase	K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D      CCO03_11565 serine/threonine protein phosphatase	K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D      CCO03_07855 phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C    01002 Peptidases and inhibitors [BR:cser01002]
D      CCO03_08990 signal peptidase II	K03101 lspA; signal peptidase II [EC:3.4.23.36]
D      CCO03_06435 hypothetical protein	K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D      CCO03_03955 glutamine amidotransferase	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      CCO03_10850 GMP synthase (glutamine-hydrolyzing)	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      CCO03_10610 peptidase C26	K07010 K07010; putative glutamine amidotransferase
D      CCO03_15115 amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      CCO03_03590 glutamate synthase subunit alpha	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      CCO03_05270 glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      CCO03_06485 hypothetical protein	K19234 ynhG; L,D-transpeptidase YnhG
D      CCO03_08025 CPBP family intramembrane metalloprotease	K07052 K07052; CAAX protease family protein
D      CCO03_14945 aminopeptidase N	K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D      CCO03_04415 oligopeptidase A	K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D      CCO03_14135 peptidase M16	K07263 pqqL; zinc protease [EC:3.4.24.-]
D      CCO03_14140 peptidase M16	K07263 pqqL; zinc protease [EC:3.4.24.-]
D      CCO03_12800 leucyl aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      CCO03_03445 glutamate carboxypeptidase	K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D      CCO03_08340 succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      CCO03_03485 amidohydrolase	K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D      CCO03_04505 type I methionyl aminopeptidase	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      CCO03_01095 Xaa-Pro aminopeptidase	K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D      CCO03_10115 cell division protein FtsH	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      CCO03_14240 peptidase M48	K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D      CCO03_15570 zinc metalloprotease HtpX	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      CCO03_04605 hypothetical protein	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      CCO03_00785 peptidase	K07387 K07387; metalloprotease [EC:3.4.24.-]
D      CCO03_18775 hypothetical protein	K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D      CCO03_14810 RIP metalloprotease RseP	K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D      CCO03_04930 hypothetical protein	K09933 mtfA; MtfA peptidase
D      CCO03_10520 hypothetical protein	K09933 mtfA; MtfA peptidase
D      CCO03_03365 serine peptidase	K04771 degP; serine protease Do [EC:3.4.21.107]
D      CCO03_07910 peptidase	K04771 degP; serine protease Do [EC:3.4.21.107]
D      CCO03_15910 2-alkenal reductase	K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D      CCO03_03295 hypothetical protein	K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D      CCO03_00075 peptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D      CCO03_12650 hypothetical protein	K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D      CCO03_00010 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D      CCO03_03700 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D      CCO03_05330 ATP-dependent Clp protease proteolytic subunit	K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D      CCO03_08720 peptidase	K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D      CCO03_03710 endopeptidase La	K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D      CCO03_08275 repressor LexA	K01356 lexA; repressor LexA [EC:3.4.21.88]
D      CCO03_08575 peptidase	K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D      CCO03_03375 signal peptidase I	K03100 lepB; signal peptidase I [EC:3.4.21.89]
D      CCO03_17730 alpha/beta hydrolase	K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-]
D      CCO03_15375 peptidase S41	K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D      CCO03_15060 S49 family peptidase	K04773 sppA; protease IV [EC:3.4.21.-]
D      CCO03_09295 LD-carboxypeptidase	K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D      CCO03_17600 HslU--HslV peptidase proteolytic subunit	K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D      CCO03_12765 gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      CCO03_11125 gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      CCO03_08290 U32 family peptidase	K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D      CCO03_12900 protease	K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D      CCO03_12410 metalloprotease PmbA	K03592 pmbA; PmbA protein
D      CCO03_03130 metalloprotease TldD	K03568 tldD; TldD protein
D      CCO03_08050 alpha-2-macroglobulin	K06894 yfhM; alpha-2-macroglobulin
D      CCO03_00270 hypothetical protein	K06894 yfhM; alpha-2-macroglobulin
D      CCO03_09305 protease modulator HflC	K04087 hflC; modulator of FtsH protease HflC
D      CCO03_09300 HflK protein	K04088 hflK; modulator of FtsH protease HflK
C    01003 Glycosyltransferases [BR:cser01003]
D      CCO03_02105 hypothetical protein	K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D      CCO03_16335 glycosyl transferase family 2	K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D      CCO03_02075 hypothetical protein	K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D      CCO03_03055 monofunctional biosynthetic peptidoglycan transglycosylase	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      CCO03_00565 hypothetical protein	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      CCO03_12850 hypothetical protein	K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D      CCO03_10670 penicillin-binding protein	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      CCO03_16195 penicillin-binding protein	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C    01005 Lipopolysaccharide biosynthesis proteins [BR:cser01005]
D      CCO03_14785 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D      CCO03_14780 lipid-A-disaccharide synthase	K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D      CCO03_17515 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D      CCO03_14795 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D      CCO03_07185 UDP-2,3-diacylglucosamine diphosphatase	K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D      CCO03_10775 tetraacyldisaccharide 4'-kinase	K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D      CCO03_17735 lipid A biosynthesis acyltransferase	K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D      CCO03_17740 lipid A biosynthesis acyltransferase	K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D      CCO03_02190 aspartyl beta-hydroxylase	K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D      CCO03_05150 3-deoxy-D-manno-octulosonic acid transferase	K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D      CCO03_11865 hypothetical protein	K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D      CCO03_07625 phosphoethanolamine transferase	K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D      CCO03_11155 3-deoxy-8-phosphooctulonate synthase	K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D      CCO03_12225 3-deoxy-manno-octulosonate cytidylyltransferase	K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D      CCO03_00155 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D      CCO03_00160 arabinose-5-phosphate isomerase	K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D      CCO03_19020 hypothetical protein	K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D      CCO03_12150 sulfatase	K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D      CCO03_03475 phosphoheptose isomerase	K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D      CCO03_02295 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D      CCO03_00890 glycosyltransferase	K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C    01011 Peptidoglycan biosynthesis and degradation proteins [BR:cser01011]
D      CCO03_03655 UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      CCO03_17430 UDP-N-acetylenolpyruvoylglucosamine reductase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      CCO03_17540 UDP-N-acetylmuramate--L-alanine ligase	K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D      CCO03_17555 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      CCO03_17570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      CCO03_17535 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      CCO03_19060 alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      CCO03_11570 glutamate racemase	K01776 murI; glutamate racemase [EC:5.1.1.3]
D      CCO03_09295 LD-carboxypeptidase	K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D      CCO03_17560 phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      CCO03_17545 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      CCO03_11310 undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      CCO03_04165 murein biosynthesis integral membrane protein MurJ	K03980 murJ; putative peptidoglycan lipid II flippase
D      CCO03_10670 penicillin-binding protein	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      CCO03_16195 penicillin-binding protein	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      CCO03_12850 hypothetical protein	K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D      CCO03_01545 penicillin-binding protein 2	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      CCO03_17575 cell division protein	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      CCO03_00075 peptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D      CCO03_00010 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D      CCO03_12650 hypothetical protein	K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D      CCO03_03055 monofunctional biosynthetic peptidoglycan transglycosylase	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      CCO03_00565 hypothetical protein	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      CCO03_06485 hypothetical protein	K19234 ynhG; L,D-transpeptidase YnhG
D      CCO03_16680 lytic transglycosylase	K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D      CCO03_02650 transglycosylase	K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D      CCO03_09055 lytic murein transglycosylase B	K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D      CCO03_09755 lytic transglycosylase	K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D      CCO03_12840 aminodeoxychorismate lyase	K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D      CCO03_18000 hypothetical protein	K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D      CCO03_05530 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      CCO03_15725 N-acetylmuramoyl-L-alanine amidase	K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C    01004 Lipid biosynthesis proteins [BR:cser01004]
D      CCO03_03330 [acyl-carrier-protein] S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      CCO03_03325 3-oxoacyl-ACP synthase	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      CCO03_00960 beta-ketoacyl-[acyl-carrier-protein] synthase I	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      CCO03_10080 beta-ketoacyl-[acyl-carrier-protein] synthase II	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      CCO03_03345 beta-ketoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      CCO03_13190 beta-ketoacyl synthase	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      CCO03_03335 fabG; 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_04440 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_00365 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_05230 oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_09895 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_10095 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_01405 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_06795 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      CCO03_00965 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA	K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D      CCO03_14790 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      CCO03_10485 hypothetical protein	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      CCO03_12285 enoyl-[acyl-carrier-protein] reductase	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      CCO03_08035 arylesterase	K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D      CCO03_00110 hypothetical protein	K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D      CCO03_16120 acyl-CoA thioesterase	K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D      CCO03_12400 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_15840 acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      CCO03_00440 propionate--CoA ligase	K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D      CCO03_05900 6-carboxyhexanoate--CoA ligase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      CCO03_13450 hypothetical protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09485 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_12060 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_06145 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_03865 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09225 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_03235 hypothetical protein	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_08055 acyl-CoA synthetase	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_00320 hypothetical protein	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_02755 AMP-binding protein	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_11920 acyl-CoA synthetase	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_16710 hypothetical protein	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_01335 long-chain fatty acid--CoA ligase	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_02030 long-chain fatty acid--CoA ligase	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_16305 acyl-CoA synthetase	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      CCO03_03320 phosphate acyltransferase	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      CCO03_03025 glycerol-3-phosphate acyltransferase	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      CCO03_07430 hypothetical protein	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      CCO03_02290 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C    01008 Polyketide biosynthesis proteins [BR:cser01008]
D      CCO03_15460 2,3-dihydro-2,3-dihydroxybenzoate synthetase	K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D      CCO03_15435 entE; 2,3-dihydroxybenzoate-AMP ligase	K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D      CCO03_15445 non-ribosomal peptide synthetase	K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D      CCO03_03245 hypothetical protein	K21164 sgcE7; enediyne biosynthesis protein E7
D      CCO03_11830 hypothetical protein	K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C    01006 Prenyltransferases [BR:cser01006]
D      CCO03_11395 polyprenyl synthetase	K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D      CCO03_15685 octaprenyl diphosphate synthase	K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D      CCO03_14825 di-trans,poly-cis-decaprenylcistransferase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      CCO03_06830 squalene synthase HpnD	K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D      CCO03_11460 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      CCO03_18525 4-hydroxybenzoate polyprenyltransferase	K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D      CCO03_05780 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
C    01007 Amino acid related enzymes [BR:cser01007]
D      CCO03_15105 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      CCO03_11320 glutamine--tRNA ligase	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      CCO03_12345 tRNA glutamyl-Q(34) synthetase GluQRS	K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D      CCO03_18265 tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      CCO03_04205 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      CCO03_07205 cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      CCO03_18935 arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      CCO03_07925 methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      CCO03_08995 isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      CCO03_12130 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      CCO03_02060 leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      CCO03_05580 lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      CCO03_13735 aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      CCO03_13580 histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      CCO03_02310 glycine--tRNA ligase subunit alpha	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      CCO03_02300 glycine--tRNA ligase subunit beta	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      CCO03_06895 serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      CCO03_15650 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      CCO03_06295 threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      CCO03_14875 alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      CCO03_06315 phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      CCO03_06320 phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      CCO03_09140 aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      CCO03_12470 aromatic amino acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      CCO03_07485 methionine aminotransferase	K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D      CCO03_08355 succinyldiaminopimelate transaminase	K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D      CCO03_12510 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_14595 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_15330 hypothetical protein	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      CCO03_18770 aspartate aminotransferase family protein	K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D      CCO03_03965 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      CCO03_04125 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      CCO03_13315 diaminobutyrate--2-oxoglutarate transaminase	K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D      CCO03_11750 glutamate-1-semialdehyde-2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      CCO03_00650 D-amino acid aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      CCO03_19035 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      CCO03_09530 hypothetical protein	K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D      CCO03_17210 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      CCO03_07800 aminotransferase DegT	K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C    00199 Cytochrome P450
C    00194 Photosynthesis proteins [BR:cser00194]
D      CCO03_02425 F0F1 ATP synthase subunit epsilon	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      CCO03_02420 F0F1 ATP synthase subunit beta	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      CCO03_02415 F0F1 ATP synthase subunit gamma	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      CCO03_02410 F0F1 ATP synthase subunit alpha	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      CCO03_02405 F0F1 ATP synthase subunit delta	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      CCO03_02400 F0F1 ATP synthase subunit B	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      CCO03_02395 F0F1 ATP synthase subunit C	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      CCO03_02390 F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      CCO03_02385 hypothetical protein	K02116 atpI; ATP synthase protein I
B
B  09182 Protein families: genetic information processing
C    03000 Transcription factors [BR:cser03000]
D      CCO03_08490 DNA (cytosine-5-)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      CCO03_13995 hypothetical protein	K07506 K07506; AraC family transcriptional regulator
D      CCO03_14395 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase	K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D      CCO03_17410 LysR family transcriptional regulator	K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D      CCO03_04495 LysR family transcriptional regulator	K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D      CCO03_18865 LysR family transcriptional regulator	K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D      CCO03_07490 transcriptional regulator	K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D      CCO03_07160 transcriptional regulator	K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D      CCO03_00725 LysR family transcriptional regulator	K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D      CCO03_08330 LysR family transcriptional regulator	K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D      CCO03_12575 hypothetical protein	K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D      CCO03_03915 hypothetical protein	K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D      CCO03_12940 GntR family transcriptional regulator	K03710 K03710; GntR family transcriptional regulator
D      CCO03_04935 GntR family transcriptional regulator	K03710 K03710; GntR family transcriptional regulator
D      CCO03_05930 hypothetical protein	K03710 K03710; GntR family transcriptional regulator
D      CCO03_14720 GntR family transcriptional regulator	K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D      CCO03_03940 GntR family transcriptional regulator	K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D      CCO03_00465 DNA-binding protein	K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D      CCO03_02510 hypothetical protein	K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D      CCO03_07875 TetR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D      CCO03_08115 TetR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D      CCO03_09235 TetR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D      CCO03_05235 TetR family transcriptional regulator	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D      CCO03_15615 hypothetical protein	K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D      CCO03_17345 hypothetical protein	K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D      CCO03_18600 AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      CCO03_05265 AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      CCO03_11035 MarR family transcriptional regulator	K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D      CCO03_07030 MarR family transcriptional regulator	K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D      CCO03_07170 MarR family transcriptional regulator	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D      CCO03_15335 Cu(I)-responsive transcriptional regulator	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D      CCO03_14730 redox-sensitive transcriptional activator SoxR	K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D      CCO03_06365 redox-sensitive transcriptional activator SoxR	K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D      CCO03_01810 hypothetical protein	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D      CCO03_02025 ferric iron uptake transcriptional regulator	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D      CCO03_04110 hypothetical protein	K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D      CCO03_05665 IclR family transcriptional regulator	K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D      CCO03_03845 IclR family transcriptional regulator	K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D      CCO03_09920 Crp/Fnr family transcriptional regulator	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_01415 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_05890 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_15520 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_12010 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_00170 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_09490 Crp/Fnr family transcriptional regulator	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_02430 hypothetical protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      CCO03_13910 transcriptional regulator	K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D      CCO03_17670 DNA-binding protein	K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D      CCO03_13165 Fe-S cluster assembly transcriptional regulator IscR	K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D      CCO03_14930 transcriptional regulator	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D      CCO03_19310 biotin--[acetyl-CoA-carboxylase] ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D      CCO03_11515 Fis family transcriptional regulator	K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D      CCO03_03975 XRE family transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D      CCO03_13495 XRE family transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D      CCO03_16890 hypothetical protein	K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D      CCO03_02945 sigma-54-dependent Fis family transcriptional regulator	K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D      CCO03_03265 nitric oxide reductase transcription regulator	K12266 norR; anaerobic nitric oxide reductase transcription regulator
D      CCO03_08620 transcriptional regulator	K07729 K07729; putative transcriptional regulator
D      CCO03_16435 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      CCO03_14285 regulator	K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D      CCO03_12880 BolA family transcriptional regulator	K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D      CCO03_01165 chromosome partitioning protein ParB	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D      CCO03_16425 heat-inducible transcriptional repressor HrcA	K03705 hrcA; heat-inducible transcriptional repressor
D      CCO03_08145 thiaminase II	K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D      CCO03_16345 TenA family transcriptional regulator	K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D      CCO03_06905 PaaX family transcriptional regulator	K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D      CCO03_16645 hypothetical protein	K06140 rnk; regulator of nucleoside diphosphate kinase
D      CCO03_07445 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      CCO03_04375 AlpA family transcriptional regulator	K07733 alpA; prophage regulatory protein
D      CCO03_13535 hypothetical protein	K07733 alpA; prophage regulatory protein
D      CCO03_04285 transcriptional regulator	K07734 paiB; transcriptional regulator
D      CCO03_07455 hypothetical protein	K07735 algH; putative transcriptional regulator
D      CCO03_17610 RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor
D      CCO03_04735 transcriptional regulator	K14414 rtcR; transcriptional regulatory protein RtcR
D      CCO03_17590 cell division/cell wall cluster transcriptional repressor MraZ	K03925 mraZ; transcriptional regulator MraZ
C    03021 Transcription machinery [BR:cser03021]
D      CCO03_16040 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      CCO03_18425 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      CCO03_19180 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      CCO03_19175 DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      CCO03_13920 DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D      CCO03_12870 RNA polymerase sigma factor RpoD	K03086 rpoD; RNA polymerase primary sigma factor
D      CCO03_03350 RNA polymerase sigma factor RpoE	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      CCO03_13005 RNA polymerase subunit sigma	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      CCO03_07590 RNA polymerase subunit sigma-24	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      CCO03_19330 RNA polymerase subunit sigma	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D      CCO03_07895 RNA polymerase subunit sigma	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D      CCO03_11985 RNA polymerase factor sigma-32	K03089 rpoH; RNA polymerase sigma-32 factor
D      CCO03_18910 RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor
D      CCO03_13965 nusA; transcription termination/antitermination protein NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      CCO03_10630 N utilization substance protein B	K03625 nusB; transcription antitermination protein NusB
D      CCO03_19205 transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG
D      CCO03_15875 glutathione S-transferase	K03599 sspA; stringent starvation protein A
D      CCO03_15870 ClpXP protease specificity-enhancing factor	K03600 sspB; stringent starvation protein B
D      CCO03_03355 hypothetical protein	K03597 rseA; sigma-E factor negative regulatory protein RseA
D      CCO03_03360 hypothetical protein	K03598 rseB; sigma-E factor negative regulatory protein RseB
D      CCO03_17610 RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor
D      CCO03_14745 transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA
D      CCO03_13930 transcription elongation factor GreB	K04760 greB; transcription elongation factor GreB
D      CCO03_09715 transcription termination factor Rho	K03628 rho; transcription termination factor Rho
C    03019 Messenger RNA biogenesis [BR:cser03019]
D      CCO03_15495 ribonuclease E/G	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      CCO03_10875 ribonuclease E/G	K08301 rng; ribonuclease G [EC:3.1.26.-]
D      CCO03_03385 ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      CCO03_15195 ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      CCO03_01140 ribonuclease N	K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D      CCO03_14230 oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-]
D      CCO03_07780 RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      CCO03_11600 ATP-dependent RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      CCO03_04800 RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      CCO03_00495 ATP-dependent DNA helicase RecQ	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      CCO03_11165 phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      CCO03_04970 polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D      CCO03_09715 transcription termination factor Rho	K03628 rho; transcription termination factor Rho
D      CCO03_04390 molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      CCO03_07510 chaperonin GroL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      CCO03_12435 RNA chaperone Hfq	K03666 hfq; host factor-I protein
D      CCO03_12315 polyphosphate kinase 2	K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D      CCO03_04195 poly(A) polymerase	K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D      CCO03_15655 RNA pyrophosphohydrolase	K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D      CCO03_07330 ribonuclease	K02553 rraA; regulator of ribonuclease activity A
D      CCO03_16410 RNase adaptor protein RapZ	K06958 rapZ; RNase adapter protein RapZ
D      CCO03_15315 ATP-dependent helicase	K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C    03041 Spliceosome
C    03011 Ribosome [BR:cser03011]
D      CCO03_05615 hypothetical protein	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D      CCO03_17230 30S ribosomal protein S1	K02945 RP-S1; small subunit ribosomal protein S1
D      CCO03_14845 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      CCO03_01050 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      CCO03_18430 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      CCO03_18465 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      CCO03_09100 30S ribosomal protein S6	K02990 RP-S6; small subunit ribosomal protein S6
D      CCO03_01000 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      CCO03_18480 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      CCO03_02250 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      CCO03_01015 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      CCO03_18435 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      CCO03_00995 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      CCO03_18440 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      CCO03_18485 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      CCO03_04965 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      CCO03_12355 30S ribosomal protein S16	K02959 RP-S16; small subunit ribosomal protein S16
D      CCO03_01065 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      CCO03_09110 30S ribosomal protein S18	K02963 RP-S18; small subunit ribosomal protein S18
D      CCO03_01040 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      CCO03_04160 30S ribosomal protein S20	K02968 RP-S20; small subunit ribosomal protein S20
D      CCO03_08130 30S ribosomal protein S21	K02970 RP-S21; small subunit ribosomal protein S21
D      CCO03_19195 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      CCO03_01035 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      CCO03_01020 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      CCO03_01025 50S ribosomal protein L4	K02926 RP-L4; large subunit ribosomal protein L4
D      CCO03_18490 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      CCO03_18475 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      CCO03_09115 50S ribosomal protein L9	K02939 RP-L9; large subunit ribosomal protein L9
D      CCO03_19190 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      CCO03_19200 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      CCO03_19185 50S ribosomal protein L7/L12	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      CCO03_02245 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      CCO03_18500 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      CCO03_18455 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      CCO03_01055 50S ribosomal protein L16	K02878 RP-L16; large subunit ribosomal protein L16
D      CCO03_18420 50S ribosomal protein L17	K02879 RP-L17; large subunit ribosomal protein L17
D      CCO03_18470 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      CCO03_14070 50S ribosomal protein L19	K02884 RP-L19; large subunit ribosomal protein L19
D      CCO03_06310 50S ribosomal protein L20	K02887 RP-L20; large subunit ribosomal protein L20
D      CCO03_15680 50S ribosomal protein L21	K02888 RP-L21; large subunit ribosomal protein L21
D      CCO03_01045 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      CCO03_01030 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      CCO03_18495 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      CCO03_15675 50S ribosomal protein L27	K02899 RP-L27; large subunit ribosomal protein L27
D      CCO03_15530 50S ribosomal protein L28	K02902 RP-L28; large subunit ribosomal protein L28
D      CCO03_01060 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      CCO03_18460 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      CCO03_06285 50S ribosomal protein L31	K02909 RP-L31; large subunit ribosomal protein L31
D      CCO03_03315 50S ribosomal protein L32	K02911 RP-L32; large subunit ribosomal protein L32
D      CCO03_15535 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      CCO03_00205 50S ribosomal protein L34	K02914 RP-L34; large subunit ribosomal protein L34
D      CCO03_06305 50S ribosomal protein L35	K02916 RP-L35; large subunit ribosomal protein L35
D      CCO03_18445 50S ribosomal protein L36	K02919 RP-L36; large subunit ribosomal protein L36
D      CCO03_16550 50S ribosomal protein L25/general stress protein Ctc	K02897 RP-L25; large subunit ribosomal protein L25
D      CCO03_18150 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18175 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18200 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18225 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18170 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18195 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18220 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18245 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18155 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18180 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18205 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18230 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
C    03009 Ribosome biogenesis [BR:cser03009]
D      CCO03_03385 ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      CCO03_14230 oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-]
D      CCO03_03390 GTPase Era	K03595 era; GTPase
D      CCO03_15670 obgE; GTPase ObgE	K03979 obgE; GTPase [EC:3.6.5.-]
D      CCO03_17610 RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor
D      CCO03_13965 nusA; transcription termination/antitermination protein NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      CCO03_10630 N utilization substance protein B	K03625 nusB; transcription antitermination protein NusB
D      CCO03_19205 transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG
D      CCO03_15045 16S rRNA pseudouridine(516) synthase	K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D      CCO03_02345 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D      CCO03_19165 16S rRNA (cytosine(967)-C(5))-methyltransferase	K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D      CCO03_06190 hypothetical protein	K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D      CCO03_16010 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D      CCO03_02365 16S rRNA (uracil(1498)-N(3))-methyltransferase	K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D      CCO03_00620 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      CCO03_17585 16S rRNA (cytosine(1402)-N(4))-methyltransferase	K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D      CCO03_03465 16S rRNA (cytidine(1402)-2'-O)-methyltransferase	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D      CCO03_04675 ribosomal RNA small subunit methyltransferase I	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D      CCO03_18010 cell division protein FtsJ	K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D      CCO03_13565 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D      CCO03_06225 rRNA methyltransferase	K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D      CCO03_10385 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D      CCO03_09820 SAM-dependent methyltransferase	K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D      CCO03_17995 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D      CCO03_18985 RNA methyltransferase	K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D      CCO03_13600 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D      CCO03_13900 23S rRNA (uracil(1939)-C(5))-methyltransferase	K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D      CCO03_12305 hypothetical protein	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      CCO03_15480 hypothetical protein	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      CCO03_11545 hypothetical protein	K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D      CCO03_15490 ribosomal large subunit pseudouridine synthase C	K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D      CCO03_11555 pseudouridine synthase	K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D      CCO03_04690 pseudouridine synthase	K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D      CCO03_01620 hypothetical protein	K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D      CCO03_01120 ribosomal-protein-alanine N-acetyltransferase	K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D      CCO03_12350 ribosome maturation factor RimM	K02860 rimM; 16S rRNA processing protein RimM
D      CCO03_14170 30S ribosomal protein S12 methylthiotransferase RimO	K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D      CCO03_15745 50S ribosomal protein L11 methyltransferase	K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D      CCO03_08335 50S ribosomal protein L3 N(5)-glutamine methyltransferase	K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D      CCO03_15300 cupin	K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D      CCO03_15495 ribonuclease E/G	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      CCO03_10875 ribonuclease E/G	K08301 rng; ribonuclease G [EC:3.1.26.-]
D      CCO03_07450 Holliday junction resolvase RuvX	K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D      CCO03_16505 ATP-dependent RNA helicase DbpA	K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D      CCO03_14245 ribosome small subunit-dependent GTPase A	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      CCO03_12440 ribosome biogenesis GTPase Der	K03977 engA; GTPase
D      CCO03_12430 GTPase HflX	K03665 hflX; GTPase
D      CCO03_00505 threonylcarbamoyl-AMP synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      CCO03_13925 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      CCO03_13955 ribosome-binding factor A	K02834 rbfA; ribosome-binding factor A
D      CCO03_13970 ribosome maturation factor RimP	K09748 rimP; ribosome maturation factor RimP
D      CCO03_10395 ribosome silencing factor	K09710 ybeB; ribosome-associated protein
D      CCO03_18855 rRNA maturation RNase YbeY	K07042 ybeY; probable rRNA maturation factor
D      CCO03_06220 RNA-binding protein	K07574 yhbY; RNA-binding protein
D      CCO03_12415 hypothetical protein	K09889 yjgA; ribosome-associated protein
D      CCO03_02010 ribosomal subunit interface protein	K05808 hpf; ribosome hibernation promoting factor
D      CCO03_04295 redox-regulated ATPase YchF	K06942 ychF; ribosome-binding ATPase
D      CCO03_03310 hypothetical protein	K07040 yceD; DUF177 domain-containing protein
C    03016 Transfer RNA biogenesis [BR:cser03016]
D      CCO03_01140 ribonuclease N	K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D      CCO03_18295 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D      CCO03_16770 RNA-splicing ligase RtcB	K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D      CCO03_15105 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      CCO03_15650 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      CCO03_08995 isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      CCO03_02060 leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      CCO03_07925 methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      CCO03_11320 glutamine--tRNA ligase	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      CCO03_18935 arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      CCO03_05580 lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      CCO03_13735 aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      CCO03_14875 alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      CCO03_06295 threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      CCO03_06895 serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      CCO03_07205 cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      CCO03_12130 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      CCO03_13580 histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      CCO03_06315 phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      CCO03_06320 phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      CCO03_18265 tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      CCO03_04205 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      CCO03_18275 D-tyrosyl-tRNA(Tyr) deacylase	K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D      CCO03_01955 HIT family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      CCO03_15400 tRNA (guanosine(46)-N7)-methyltransferase TrmB	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D      CCO03_14305 tRNA pseudouridine(38-40) synthase TruA	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D      CCO03_13950 tRNA pseudouridine(55) synthase TruB	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D      CCO03_13160 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      CCO03_00505 threonylcarbamoyl-AMP synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      CCO03_11460 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      CCO03_00185 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D      CCO03_00615 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D      CCO03_00200 hypothetical protein	K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D      CCO03_03500 rnpB; RNase P RNA component class A	K01978 rnpB; M1 RNA
D      CCO03_12035 ribonuclease PH	K00989 rph; ribonuclease PH [EC:2.7.7.56]
D      CCO03_03075 ribonuclease II	K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D      CCO03_05260 hypothetical protein	K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D      CCO03_07790 energy-dependent translational throttle protein EttA	K06020 ettA; energy-dependent translational throttle protein EttA
D      CCO03_02310 glycine--tRNA ligase subunit alpha	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      CCO03_02300 glycine--tRNA ligase subunit beta	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      CCO03_12345 tRNA glutamyl-Q(34) synthetase GluQRS	K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D      CCO03_09655 tRNA dihydrouridine(20/20a) synthase DusA	K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D      CCO03_09815 tRNA dihydrouridine synthase DusB	K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D      CCO03_03190 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D      CCO03_08965 rRNA methyltransferase	K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D      CCO03_14075 tRNA (guanosine(37)-N1)-methyltransferase TrmD	K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D      CCO03_05720 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL	K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D      CCO03_14770 rRNA methyltransferase	K03437 spoU; RNA methyltransferase, TrmH family
D      CCO03_12305 hypothetical protein	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      CCO03_15480 hypothetical protein	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      CCO03_18140 tRNA 2-thiouridine(34) synthase MnmA	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      CCO03_18790 tRNA 2-thiocytidine(32) synthetase TtcA	K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D      CCO03_09540 hypothetical protein	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      CCO03_13150 iron-sulfur cluster assembly protein IscA	K13628 iscA; iron-sulfur cluster assembly protein
D      CCO03_12845 hypothetical protein	K06980 ygfZ; tRNA-modifying protein YgfZ
D      CCO03_04535 hypothetical protein	K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D      CCO03_00115 7-cyano-7-deazaguanine synthase QueC	K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D      CCO03_14035 6-pyruvoyl tetrahydrobiopterin synthase	K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D      CCO03_14030 7-carboxy-7-deazaguanine synthase QueE	K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D      CCO03_12090 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D      CCO03_05540 tRNA epoxyqueuosine(34) reductase QueG	K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D      CCO03_18375 tRNA guanosine(34) transglycosylase Tgt	K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D      CCO03_01115 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D      CCO03_07960 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D      CCO03_05535 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D      CCO03_09395 tRNA threonylcarbamoyladenosine dehydratase	K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D      CCO03_15195 ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      CCO03_04970 polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C    03012 Translation factors [BR:cser03012]
D      CCO03_13960 translation initiation factor IF-2	K02519 infB; translation initiation factor IF-2
D      CCO03_06300 translation initiation factor IF-3	K02520 infC; translation initiation factor IF-3
D      CCO03_09990 ABC transporter	K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D      CCO03_14840 translation elongation factor Ts	K02357 tsf; elongation factor Ts
D      CCO03_01010 elongation factor Tu	K02358 tuf; elongation factor Tu
D      CCO03_19220 elongation factor Tu	K02358 tuf; elongation factor Tu
D      CCO03_01005 elongation factor G	K02355 fusA; elongation factor G
D      CCO03_03040 elongation factor G	K02355 fusA; elongation factor G
D      CCO03_10595 peptide chain release factor 1	K02835 prfA; peptide chain release factor 1
D      CCO03_14830 ribosome recycling factor	K02838 frr; ribosome recycling factor
D      CCO03_10605 protein-(glutamine-N5) methyltransferase, release factor-specific	K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D      CCO03_16555 aminoacyl-tRNA hydrolase	K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D      CCO03_18060 translation initiation factor IF-1	K02518 infA; translation initiation factor IF-1
D      CCO03_01995 translation initiation factor IF-1	K02518 infA; translation initiation factor IF-1
D      CCO03_08160 elongation factor P	K02356 efp; elongation factor P
D      CCO03_16320 peptide chain release factor 3	K02837 prfC; peptide chain release factor 3
D      CCO03_02215 peptide chain release factor H	K02839 prfH; peptide chain release factor
D      CCO03_14090 aminoacyl-tRNA hydrolase	K15034 yaeJ; ribosome-associated protein
C    03110 Chaperones and folding catalysts [BR:cser03110]
D      CCO03_10350 ATP-dependent Clp protease ATP-binding subunit ClpA	K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D      CCO03_13685 ATP-dependent chaperone ClpB	K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D      CCO03_03705 ATP-dependent protease ATP-binding subunit ClpX	K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D      CCO03_17595 HslU--HslV peptidase ATPase subunit	K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D      CCO03_18860 molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
D      CCO03_04390 molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      CCO03_13135 Fe-S protein assembly chaperone HscA	K04044 hscA; molecular chaperone HscA
D      CCO03_07510 chaperonin GroL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      CCO03_04385 molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      CCO03_09030 cytochrome C biogenesis protein	K05516 cbpA; curved DNA-binding protein
D      CCO03_13140 Fe-S protein assembly co-chaperone HscB	K04082 hscB; molecular chaperone HscB
D      CCO03_11870 Hsp33 chaperonin	K04083 hslO; molecular chaperone Hsp33
D      CCO03_04395 nucleotide exchange factor GrpE	K03687 GRPE; molecular chaperone GrpE
D      CCO03_07975 RNA-binding protein	K04762 hslR; ribosome-associated heat shock protein Hsp15
D      CCO03_07515 co-chaperone GroES	K04078 groES; chaperonin GroES
D      CCO03_03365 serine peptidase	K04771 degP; serine protease Do [EC:3.4.21.107]
D      CCO03_07910 peptidase	K04771 degP; serine protease Do [EC:3.4.21.107]
D      CCO03_10115 cell division protein FtsH	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      CCO03_02390 F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      CCO03_15355 protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      CCO03_01480 hypothetical protein	K09796 pccA; periplasmic copper chaperone A
D      CCO03_07195 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      CCO03_07190 cyclophilin	K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D      CCO03_07950 hypothetical protein	K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D      CCO03_04405 peptidylprolyl isomerase	K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D      CCO03_04795 peptidylprolyl isomerase	K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D      CCO03_11195 peptidylprolyl isomerase	K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D      CCO03_03415 peptidylprolyl isomerase	K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D      CCO03_13175 peptidylprolyl isomerase	K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D      CCO03_12885 peptidylprolyl isomerase	K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D      CCO03_02350 hypothetical protein	K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D      CCO03_12255 thiol reductase thioredoxin	K03671 TXN; thioredoxin
D      CCO03_09720 thioredoxin	K03671 TXN; thioredoxin
D      CCO03_10970 hypothetical protein	K03671 TXN; thioredoxin
D      CCO03_02270 thiol reductase thioredoxin	K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D      CCO03_01105 thioredoxin	K05838 ybbN; putative thioredoxin
D      CCO03_15360 glutaredoxin 3	K03676 grxC; glutaredoxin 3
D      CCO03_15055 monothiol glutaredoxin, Grx4 family	K07390 grxD; monothiol glutaredoxin
D      CCO03_18925 hypothetical protein	K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D      CCO03_14225 hypothetical protein	K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D      CCO03_07385 disulfide isomerase	K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C    04131 Membrane trafficking [BR:cser04131]
D      CCO03_13605 nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      CCO03_15390 hypothetical protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      CCO03_00975 fructose bisphosphate aldolase	K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      CCO03_00035 type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      CCO03_15370 gpmA; phosphoglyceromutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      CCO03_00970 pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      CCO03_18860 molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
C    04121 Ubiquitin system [BR:cser04121]
D      CCO03_05615 hypothetical protein	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
C    03051 Proteasome [BR:cser03051]
D      CCO03_18860 molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
C    03032 DNA replication proteins [BR:cser03032]
D      CCO03_09770 ribonuclease HI	K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D      CCO03_08490 DNA (cytosine-5-)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      CCO03_07935 DNA-binding protein HU	K03530 hupB; DNA-binding protein HU-beta
D      CCO03_06325 integration host factor subunit alpha	K04764 ihfA; integration host factor subunit alpha
D      CCO03_17235 integration host factor subunit beta	K05788 ihfB; integration host factor subunit beta
D      CCO03_00005 chromosomal replication initiation protein DnaA	K02313 dnaA; chromosomal replication initiator protein
D      CCO03_09120 replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      CCO03_08630 hypothetical protein	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      CCO03_12860 DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      CCO03_17460 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_08500 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_14505 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      CCO03_00045 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      CCO03_12795 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      CCO03_02070 DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      CCO03_12825 DNA polymerase III subunit delta'	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      CCO03_08610 hypothetical protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_13125 DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_09735 hypothetical protein	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      CCO03_14775 ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      CCO03_10255 DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      CCO03_13870 ligA; DNA ligase (NAD(+)) LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      CCO03_04185 DnaA regulatory inactivator Hda	K10763 hda; DnaA-homolog protein
D      CCO03_17200 DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      CCO03_00040 DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      CCO03_09785 DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      CCO03_09775 DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      CCO03_19345 DNA topoisomerase III	K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C    03036 Chromosome and associated proteins [BR:cser03036]
D      CCO03_08490 DNA (cytosine-5-)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      CCO03_03385 ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      CCO03_00975 fructose bisphosphate aldolase	K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      CCO03_02705 hypothetical protein	K03746 hns; DNA-binding protein H-NS
D      CCO03_11580 histone	K03746 hns; DNA-binding protein H-NS
D      CCO03_07935 DNA-binding protein HU	K03530 hupB; DNA-binding protein HU-beta
D      CCO03_06325 integration host factor subunit alpha	K04764 ihfA; integration host factor subunit alpha
D      CCO03_17235 integration host factor subunit beta	K05788 ihfB; integration host factor subunit beta
D      CCO03_09030 cytochrome C biogenesis protein	K05516 cbpA; curved DNA-binding protein
D      CCO03_09025 hypothetical protein	K18997 cbpM; chaperone modulatory protein CbpM
D      CCO03_00005 chromosomal replication initiation protein DnaA	K02313 dnaA; chromosomal replication initiator protein
D      CCO03_18870 DNA starvation/stationary phase protection protein	K04047 dps; starvation-inducible DNA-binding protein
D      CCO03_11515 Fis family transcriptional regulator	K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D      CCO03_12435 RNA chaperone Hfq	K03666 hfq; host factor-I protein
D      CCO03_18600 AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      CCO03_05265 AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      CCO03_08365 chromosome segregation protein SMC	K03529 smc; chromosome segregation protein
D      CCO03_08935 segregation/condensation protein A	K05896 scpA; segregation and condensation protein A
D      CCO03_11550 SMC-Scp complex subunit ScpB	K06024 scpB; segregation and condensation protein B
D      CCO03_17525 cell division protein FtsA	K03590 ftsA; cell division protein FtsA
D      CCO03_11175 septation ring formation regulator EzrA	K05589 ftsB; cell division protein FtsB
D      CCO03_17575 cell division protein	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      CCO03_15515 cell division protein FtsK	K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D      CCO03_17580 cell division protein FtsL	K03586 ftsL; cell division protein FtsL
D      CCO03_17530 hypothetical protein	K03589 ftsQ; cell division protein FtsQ
D      CCO03_17550 putative lipid II flippase FtsW	K03588 ftsW; cell division protein FtsW
D      CCO03_17520 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      CCO03_11375 cell division protein ZapA	K09888 zapA; cell division protein ZapA
D      CCO03_11370 hypothetical protein	K09892 zapB; cell division protein ZapB
D      CCO03_15795 cell division protein ZapD	K18778 zapD; cell division protein ZapD
D      CCO03_06270 cell division protein ZapE	K06916 zapE; cell division protein ZapE
D      CCO03_05530 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      CCO03_01990 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_02515 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_19305 septum site-determining protein MinC	K03610 minC; septum site-determining protein MinC
D      CCO03_19300 septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
D      CCO03_19295 cell division topological specificity factor MinE	K03608 minE; cell division topological specificity factor
D      CCO03_01530 rod shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      CCO03_01535 rod shape-determining protein MreC	K03570 mreC; rod shape-determining protein MreC
D      CCO03_01540 rod shape-determining protein MreD	K03571 mreD; rod shape-determining protein MreD
D      CCO03_03115 rod shape-determining protein RodA	K05837 rodA; rod shape determining protein RodA
D      CCO03_00630 chromosome partitioning protein	K03496 parA; chromosome partitioning protein
D      CCO03_00675 cobyrinic acid a,c-diamide synthase	K03496 parA; chromosome partitioning protein
D      CCO03_01165 chromosome partitioning protein ParB	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D      CCO03_09785 DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      CCO03_09775 DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      CCO03_00615 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D      CCO03_00620 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      CCO03_17620 recombinase XerC	K03733 xerC; integrase/recombinase XerC
D      CCO03_07120 site-specific tyrosine recombinase XerD	K04763 xerD; integrase/recombinase XerD
D      CCO03_13665 Fe-S-binding ATPase	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      CCO03_18955 addiction module protein	K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D      CCO03_17720 YihA family ribosome biogenesis GTP-binding protein	K03978 engB; GTP-binding protein
C    03400 DNA repair and recombination proteins [BR:cser03400]
D      CCO03_13015 cysteine methyltransferase	K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D      CCO03_08910 deoxyribodipyrimidine photolyase	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D      CCO03_19240 uracil-DNA glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D      CCO03_16510 A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      CCO03_14670 endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      CCO03_16040 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      CCO03_15805 7,8-dihydro-8-oxoguanine-triphosphatase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      CCO03_03545 NUDIX hydrolase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      CCO03_00740 hypothetical protein	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      CCO03_13245 hypothetical protein	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      CCO03_14395 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase	K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D      CCO03_01125 hypothetical protein	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      CCO03_07210 DNA-3-methyladenine glycosylase	K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D      CCO03_06550 3-methyladenine DNA glycosylase	K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D      CCO03_16520 DNA-formamidopyrimidine glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      CCO03_04955 exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      CCO03_00690 exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      CCO03_05565 single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      CCO03_13870 ligA; DNA ligase (NAD(+)) LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      CCO03_10255 DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      CCO03_17480 excinuclease ABC subunit A	K03701 uvrA; excinuclease ABC subunit A
D      CCO03_13840 excinuclease ABC subunit B	K03702 uvrB; excinuclease ABC subunit B
D      CCO03_08300 excinuclease ABC subunit C	K03703 uvrC; excinuclease ABC subunit C
D      CCO03_07735 DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      CCO03_19180 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      CCO03_19175 DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      CCO03_18425 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      CCO03_13920 DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D      CCO03_14360 transcription-repair coupling factor	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D      CCO03_08920 DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS
D      CCO03_06070 DNA mismatch repair protein MutL	K03572 mutL; DNA mismatch repair protein MutL
D      CCO03_10345 exodeoxyribonuclease I	K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D      CCO03_10760 exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      CCO03_11400 exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      CCO03_14505 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      CCO03_00045 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      CCO03_12795 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      CCO03_02070 DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      CCO03_12825 DNA polymerase III subunit delta'	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      CCO03_08610 hypothetical protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_13125 DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      CCO03_09735 hypothetical protein	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      CCO03_17460 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_08500 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_11450 exodeoxyribonuclease V subunit beta	K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D      CCO03_11445 exodeoxyribonuclease V subunit alpha	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      CCO03_19260 recombinase RecA	K03553 recA; recombination protein RecA
D      CCO03_03290 Holliday junction branch migration protein RuvA	K03550 ruvA; holliday junction DNA helicase RuvA
D      CCO03_16725 Holliday junction branch migration DNA helicase RuvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      CCO03_03050 crossover junction endodeoxyribonuclease RuvC	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D      CCO03_17055 hypothetical protein	K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D      CCO03_18645 primosomal protein N'	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D      CCO03_09105 primosomal replication protein N	K02686 priB; primosomal replication protein N
D      CCO03_01200 DNA repair protein RadA	K04485 radA; DNA repair protein RadA/Sms
D      CCO03_18360 ATP-dependent DNA helicase RecG	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D      CCO03_03395 DNA repair protein RecO	K03584 recO; DNA repair protein RecO (recombination protein O)
D      CCO03_09745 recombination protein RecR	K06187 recR; recombination protein RecR
D      CCO03_16415 DNA repair protein RecN	K03631 recN; DNA repair protein RecN (Recombination protein N)
D      CCO03_15545 hypothetical protein	K03554 rdgC; recombination associated protein RdgC
D      CCO03_06710 subtype I-E CRISPR-associated endonuclease Cas1	K15342 cas1; CRISP-associated protein Cas1
D      CCO03_10445 ATP-binding protein	K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D      CCO03_00980 hypothetical protein	K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D      CCO03_17200 DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      CCO03_00040 DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      CCO03_07935 DNA-binding protein HU	K03530 hupB; DNA-binding protein HU-beta
D      CCO03_17665 MBL fold metallo-hydrolase	K07455 recT; recombination protein RecT
D      CCO03_11515 Fis family transcriptional regulator	K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D      CCO03_06325 integration host factor subunit alpha	K04764 ihfA; integration host factor subunit alpha
D      CCO03_17235 integration host factor subunit beta	K05788 ihfB; integration host factor subunit beta
D      CCO03_00495 ATP-dependent DNA helicase RecQ	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      CCO03_02705 hypothetical protein	K03746 hns; DNA-binding protein H-NS
D      CCO03_11580 histone	K03746 hns; DNA-binding protein H-NS
D      CCO03_11765 DNA polymerase IV	K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D      CCO03_08580 DNA polymerase V subunit UmuC	K03502 umuC; DNA polymerase V
D      CCO03_08575 peptidase	K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D      CCO03_08275 repressor LexA	K01356 lexA; repressor LexA [EC:3.4.21.88]
D      CCO03_13520 DNA polymerase II	K02336 polB; DNA polymerase II [EC:2.7.7.7]
D      CCO03_14330 hypothetical protein	K14160 imuA; protein ImuA
D      CCO03_14335 hypothetical protein	K14161 imuB; protein ImuB
D      CCO03_14340 hypothetical protein	K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D      CCO03_19265 recombination regulator RecX	K03565 recX; regulatory protein
D      CCO03_04590 ATP-dependent DNA helicase Rep	K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D      CCO03_02280 ATP-dependent DNA helicase DinG	K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D      CCO03_17385 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      CCO03_10940 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      CCO03_10935 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C    03029 Mitochondrial biogenesis [BR:cser03029]
D      CCO03_15885 cytochrome b	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      CCO03_13960 translation initiation factor IF-2	K02519 infB; translation initiation factor IF-2
D      CCO03_06300 translation initiation factor IF-3	K02520 infC; translation initiation factor IF-3
D      CCO03_14840 translation elongation factor Ts	K02357 tsf; elongation factor Ts
D      CCO03_01010 elongation factor Tu	K02358 tuf; elongation factor Tu
D      CCO03_19220 elongation factor Tu	K02358 tuf; elongation factor Tu
D      CCO03_01005 elongation factor G	K02355 fusA; elongation factor G
D      CCO03_03040 elongation factor G	K02355 fusA; elongation factor G
D      CCO03_03390 GTPase Era	K03595 era; GTPase
D      CCO03_18265 tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      CCO03_02060 leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      CCO03_13735 aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      CCO03_18935 arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      CCO03_03515 amidase	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      CCO03_04225 amidase	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      CCO03_14400 amidase	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      CCO03_01520 aspartyl/glutamyl-tRNA amidotransferase subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      CCO03_01510 glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit B	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      CCO03_01525 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      CCO03_13560 endonuclease	K01173 ENDOG; endonuclease G, mitochondrial
D      CCO03_10130 endonuclease	K01173 ENDOG; endonuclease G, mitochondrial
D      CCO03_17460 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_08500 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      CCO03_14805 outer membrane protein assembly factor BamA	K07277 SAM50; outer membrane protein insertion porin family
D      CCO03_04390 molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      CCO03_04395 nucleotide exchange factor GrpE	K03687 GRPE; molecular chaperone GrpE
D      CCO03_07510 chaperonin GroL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      CCO03_07515 co-chaperone GroES	K04078 groES; chaperonin GroES
D      CCO03_04385 molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      CCO03_13160 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      CCO03_13140 Fe-S protein assembly co-chaperone HscB	K04082 hscB; molecular chaperone HscB
D      CCO03_15055 monothiol glutaredoxin, Grx4 family	K07390 grxD; monothiol glutaredoxin
D      CCO03_13665 Fe-S-binding ATPase	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      CCO03_05780 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      CCO03_05745 cytochrome c oxidase assembly protein	K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D      CCO03_05775 heme A synthase	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      CCO03_00190 membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      CCO03_10785 hypothetical protein	K14998 SURF1; surfeit locus 1 family protein
D      CCO03_01475 SCO family protein	K07152 SCO1; protein SCO1
D      CCO03_05785 SCO family protein	K07152 SCO1; protein SCO1
D      CCO03_18860 molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
B
B  09183 Protein families: signaling and cellular processes
C    02000 Transporters [BR:cser02000]
D      CCO03_09375 lipid A export permease/ATP-binding protein MsbA	K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D      CCO03_14270 multidrug ABC transporter ATP-binding protein	K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D      CCO03_10040 ABC transporter	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      CCO03_14965 hypothetical protein	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      CCO03_18250 ABC transporter ATP-binding protein	K15738 uup; ABC transport system ATP-binding/permease protein
D      CCO03_16605 thiosulfate transporter subunit	K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D      CCO03_07150 sulfate transporter subunit	K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D      CCO03_16600 sulfate ABC transporter permease subunit CysT	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      CCO03_16595 sulfate ABC transporter permease subunit CysW	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      CCO03_16590 sulfate ABC transporter ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      CCO03_02450 molybdate ABC transporter substrate-binding protein	K02020 modA; molybdate transport system substrate-binding protein
D      CCO03_02455 molybdenum ABC transporter permease subunit	K02018 modB; molybdate transport system permease protein
D      CCO03_02460 hypothetical protein	K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D      CCO03_16085 ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      CCO03_16090 sulfonate ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      CCO03_16095 hypothetical protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      CCO03_13055 Fe(3+) ABC transporter substrate-binding protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      CCO03_10280 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      CCO03_10275 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      CCO03_02565 glycine betaine ABC transporter substrate-binding protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      CCO03_02570 glycine betaine ABC transporter substrate-binding protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      CCO03_02575 proline/betaine ABC transporter permease ProW	K02001 proW; glycine betaine/proline transport system permease protein
D      CCO03_02580 glycine betaine/L-proline ABC transporter ATP-binding protein	K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D      CCO03_09245 ABC transporter substrate-binding protein	K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D      CCO03_09750 hypothetical protein	K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D      CCO03_09250 ABC transporter permease	K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D      CCO03_09255 sulfonate ABC transporter ATP-binding protein	K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D      CCO03_01550 BMP family ABC transporter substrate-binding protein	K07335 bmpA; basic membrane protein A and related proteins
D      CCO03_11265 BMP family ABC transporter substrate-binding protein	K07335 bmpA; basic membrane protein A and related proteins
D      CCO03_03620 outer membrane lipid asymmetry maintenance protein MlaD	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      CCO03_00595 hypothetical protein	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      CCO03_10265 mammalian cell entry protein	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      CCO03_03615 ABC transporter permease	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      CCO03_00585 ABC transporter permease	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      CCO03_10260 hypothetical protein	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      CCO03_03610 ABC transporter ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      CCO03_00590 ABC transporter ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      CCO03_00600 hypothetical protein	K18480 linN; cholesterol transport system auxiliary component
D      CCO03_03630 hypothetical protein	K07323 mlaC; phospholipid transport system substrate-binding protein
D      CCO03_03635 hypothetical protein	K07122 mlaB; phospholipid transport system transporter-binding protein
D      CCO03_06085 phosphate ABC transporter substrate-binding protein PstS	K02040 pstS; phosphate transport system substrate-binding protein
D      CCO03_06090 phosphate ABC transporter permease subunit PstC	K02037 pstC; phosphate transport system permease protein
D      CCO03_06095 phosphate ABC transporter, permease protein PstA	K02038 pstA; phosphate transport system permease protein
D      CCO03_06100 phosphate ABC transporter ATP-binding protein	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      CCO03_10320 phosphonate ABC transporter substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      CCO03_10330 phosphonate ABC transporter, permease protein PhnE	K02042 phnE; phosphonate transport system permease protein
D      CCO03_10325 phosphonate ABC transporter ATP-binding protein	K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D      CCO03_16670 amino acid ABC transporter substrate-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      CCO03_14460 amino acid ABC transporter substrate-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      CCO03_16660 amino acid ABC transporter permease	K10002 gltK; glutamate/aspartate transport system permease protein
D      CCO03_16665 glutamate ABC transporter permease	K10003 gltJ; glutamate/aspartate transport system permease protein
D      CCO03_16655 amino acid ABC transporter ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      CCO03_05400 amino acid ABC transporter substrate-binding protein	K09969 aapJ; general L-amino acid transport system substrate-binding protein
D      CCO03_05395 amino acid ABC transporter permease	K09970 aapQ; general L-amino acid transport system permease protein
D      CCO03_05390 amino acid ABC transporter permease	K09971 aapM; general L-amino acid transport system permease protein
D      CCO03_07970 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11800 leucine ABC transporter subunit substrate-binding protein LivK	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_17660 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_00345 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_09465 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_04065 branched chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_04145 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_01665 ABC transporter permease	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_01760 amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11610 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11640 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      CCO03_11620 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_11805 branched-chain amino acid ABC transporter permease LivH	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_17655 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_00340 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_09475 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_12080 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_04070 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_04150 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      CCO03_11615 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_11810 livM; high-affinity branched-chain amino acid ABC transporter permease LivM	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_12075 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_17650 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_04075 ABC transporter ATP-binding protein	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_04155 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_00335 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_09470 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      CCO03_11630 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11815 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_17645 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_00330 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_09480 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_12070 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04080 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04135 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11625 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_11820 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_12065 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_17640 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04085 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_04140 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_00325 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_09460 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      CCO03_16650 methionine ABC transporter substrate-binding protein	K02073 metQ; D-methionine transport system substrate-binding protein
D      CCO03_07230 DL-methionine transporter permease subunit	K02072 metI; D-methionine transport system permease protein
D      CCO03_07225 phosphate ABC transporter ATP-binding protein	K02071 metN; D-methionine transport system ATP-binding protein
D      CCO03_01770 urea ABC transporter substrate-binding protein	K11959 urtA; urea transport system substrate-binding protein
D      CCO03_01870 urea ABC transporter substrate-binding protein	K11959 urtA; urea transport system substrate-binding protein
D      CCO03_01865 urea ABC transporter permease subunit UrtB	K11960 urtB; urea transport system permease protein
D      CCO03_01860 urea ABC transporter permease subunit UrtC	K11961 urtC; urea transport system permease protein
D      CCO03_01855 urea ABC transporter ATP-binding protein UrtD	K11962 urtD; urea transport system ATP-binding protein
D      CCO03_01850 urea ABC transporter ATP-binding subunit UrtE	K11963 urtE; urea transport system ATP-binding protein
D      CCO03_00400 ABC transporter substrate-binding protein	K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D      CCO03_01430 ABC transporter permease	K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D      CCO03_01425 ABC transporter ATP-binding protein	K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D      CCO03_13300 ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      CCO03_07640 amino acid ABC transporter substrate-binding protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      CCO03_12040 amino acid ABC transporter substrate-binding protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      CCO03_06595 ABC transporter substrate-binding protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      CCO03_13290 ectoine/hydroxyectoine ABC transporter permease subunit EhuD	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      CCO03_13295 ectoine/hydroxyectoine ABC transporter permease subunit EhuC	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      CCO03_07630 ABC transporter permease	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      CCO03_07635 amino acid ABC transporter permease	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      CCO03_12045 amino acid ABC transporter permease	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      CCO03_06590 hypothetical protein	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      CCO03_06585 hypothetical protein	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      CCO03_09995 hypothetical protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_13420 hypothetical protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_09195 peptide ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_09200 peptide ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_09205 peptide ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_04230 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      CCO03_10000 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      CCO03_13415 peptide ABC transporter	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      CCO03_09185 glutathione ABC transporter permease GsiC	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      CCO03_04270 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      CCO03_10005 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      CCO03_09190 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      CCO03_04265 peptide ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      CCO03_10010 hypothetical protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      CCO03_13405 hypothetical protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      CCO03_09210 glutathione ABC transporter ATP-binding protein GsiA	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      CCO03_04260 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      CCO03_12280 ABC transporter substrate-binding protein	K13893 yejA; microcin C transport system substrate-binding protein
D      CCO03_12275 microcin ABC transporter permease	K13894 yejB; microcin C transport system permease protein
D      CCO03_12270 peptide ABC transporter permease	K13895 yejE; microcin C transport system permease protein
D      CCO03_12265 microcin ABC transporter ATP-binding protein	K13896 yejF; microcin C transport system ATP-binding protein
D      CCO03_15425 ABC transporter substrate-binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      CCO03_16050 ABC transporter substrate-binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      CCO03_15420 iron ABC transporter permease	K02015 ABC.FEV.P; iron complex transport system permease protein
D      CCO03_16055 ABC transporter permease	K02015 ABC.FEV.P; iron complex transport system permease protein
D      CCO03_15415 iron ABC transporter	K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D      CCO03_16060 hypothetical protein	K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D      CCO03_11290 hypothetical protein	K25034 btuF; cobalamin transport system substrate-binding protein
D      CCO03_19275 ABC transporter substrate-binding protein	K25034 btuF; cobalamin transport system substrate-binding protein
D      CCO03_19280 ABC transporter permease	K25027 btuC; cobalamin transport system permease protein
D      CCO03_13205 hypothetical protein	K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D      CCO03_19285 ABC transporter	K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D      CCO03_00850 cobalt transporter	K10094 cbiK; nickel transport protein
D      CCO03_17325 hypothetical protein	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      CCO03_17845 ABC transporter	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      CCO03_17940 sugar ABC transporter permease	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      CCO03_02155 ABC transporter	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      CCO03_17935 ABC transporter ATP-binding protein	K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D      CCO03_02150 sugar ABC transporter ATP-binding protein	K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D      CCO03_17840 ABC transporter	K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D      CCO03_12805 LPS export ABC transporter permease LptF	K07091 lptF; lipopolysaccharide export system permease protein
D      CCO03_12810 LPS export ABC transporter permease LptG	K11720 lptG; lipopolysaccharide export system permease protein
D      CCO03_18915 LPS export ABC transporter ATP-binding protein	K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D      CCO03_06720 lipoprotein-releasing system transmembrane subunit LolC	K09808 lolC_E; lipoprotein-releasing system permease protein
D      CCO03_06725 lipoprotein-releasing system ATP-binding protein LolD	K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D      CCO03_03645 metal-dependent hydrolase	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      CCO03_03640 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      CCO03_17320 sugar ABC transporter	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      CCO03_14535 ABC transporter	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      CCO03_07865 ABC transporter permease	K02004 ABC.CD.P; putative ABC transport system permease protein
D      CCO03_10910 hypothetical protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      CCO03_08030 ABC transporter	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      CCO03_11475 ABC transporter ATP-binding protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      CCO03_15395 bile acid:sodium symporter	K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D      CCO03_06275 MATE family efflux transporter	K26939 norM; MATE family, multidrug efflux pump
D      CCO03_16695 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      CCO03_08040 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      CCO03_07990 alpha-ketoglutarate permease	K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D      CCO03_16440 MFS transporter	K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D      CCO03_14120 MFS transporter	K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D      CCO03_15465 hypothetical protein	K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D      CCO03_07075 aromatic acid/H+ symport family MFS transporter	K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D      CCO03_08890 MFS transporter	K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D      CCO03_05365 MFS transporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      CCO03_19065 lysophospholipid transporter LplT	K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D      CCO03_15430 MFS transporter	K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D      CCO03_10050 hypothetical protein	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      CCO03_09670 Bcr/CflA family drug resistance efflux transporter	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      CCO03_14480 Bcr/CflA family drug resistance efflux transporter	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      CCO03_11040 Bcr/CflA family drug resistance efflux transporter	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      CCO03_13105 sugar transporter	K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D      CCO03_12160 MFS transporter	K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D      CCO03_18300 MFS transporter	K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D      CCO03_13040 MFS transporter	K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D      CCO03_05245 emrB; MFS transporter	K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D      CCO03_12125 MFS transporter	K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D      CCO03_02195 MFS transporter	K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D      CCO03_09825 MFS transporter	K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D      CCO03_00015 MFS transporter	K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D      CCO03_00490 phosphoenolpyruvate--protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      CCO03_01090 phosphocarrier protein HPr	K02784 ptsH; phosphocarrier protein HPr
D      CCO03_01085 PTS fructose transporter subunit IIA	K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D      CCO03_02015 PTS sugar transporter subunit IIA	K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D      CCO03_16125 aquaporin Z	K06188 aqpZ; aquaporin Z
D      CCO03_00360 ammonia channel protein	K03320 amt; ammonium transporter, Amt family
D      CCO03_15240 ammonia channel protein	K03320 amt; ammonium transporter, Amt family
D      CCO03_12450 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_00605 glutathione transferase GstA	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_13895 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_05335 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_14575 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_01710 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_07300 hypothetical protein	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_13240 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      CCO03_15875 glutathione S-transferase	K03599 sspA; stringent starvation protein A
D      CCO03_00550 trypsin	K07114 yfbK; Ca-activated chloride channel homolog
D      CCO03_06745 ABC transporter ATP-binding protein	K07114 yfbK; Ca-activated chloride channel homolog
D      CCO03_10430 formate transporter	K21993 fdhC; formate transporter
D      CCO03_15895 mscL; large-conductance mechanosensitive channel protein	K03282 mscL; large conductance mechanosensitive channel
D      CCO03_00050 Ion channel protein	K05802 mscK; potassium-dependent mechanosensitive channel
D      CCO03_03015 mechanosensitive ion channel protein MscS	K16053 ybdG; miniconductance mechanosensitive channel
D      CCO03_09555 biopolymer transporter	K03561 exbB; biopolymer transport protein ExbB
D      CCO03_10765 flagellar motor protein MotA	K03561 exbB; biopolymer transport protein ExbB
D      CCO03_02045 flagellar motor protein MotA	K03561 exbB; biopolymer transport protein ExbB
D      CCO03_09550 biopolymer transporter ExbD	K03559 exbD; biopolymer transport protein ExbD
D      CCO03_10770 biopolymer transporter ExbD	K03559 exbD; biopolymer transport protein ExbD
D      CCO03_10650 protein TolQ	K03562 tolQ; biopolymer transport protein TolQ
D      CCO03_10655 hypothetical protein	K03560 tolR; biopolymer transport protein TolR
D      CCO03_02050 biopolymer transporter ExbD	K03560 tolR; biopolymer transport protein TolR
D      CCO03_02005 magnesium and cobalt transport protein CorA	K03284 corA; magnesium transporter
D      CCO03_11470 magnesium and cobalt transport protein CorA	K03284 corA; magnesium transporter
D      CCO03_09330 magnesium transporter CorA	K16074 zntB; zinc transporter
D      CCO03_15550 fluoride ion transporter CrcB	K06199 crcB; fluoride exporter
D      CCO03_16585 hypothetical protein	K08994 yneE; ion channel-forming bestrophin family protein
D      CCO03_11585 hypothetical protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      CCO03_16735 hypothetical protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      CCO03_17195 hypothetical protein	K03286 TC.OOP; OmpA-OmpF porin, OOP family
D      CCO03_00055 hypothetical protein	K12686 apeE; outer membrane lipase/esterase
D      CCO03_12895 hypothetical protein	K19611 fepA; ferric enterobactin receptor
D      CCO03_03600 hypothetical protein	K16090 fiu; catecholate siderophore receptor
D      CCO03_00695 TonB-dependent siderophore receptor	K16090 fiu; catecholate siderophore receptor
D      CCO03_19270 TonB-dependent receptor	K16092 btuB; vitamin B12 transporter
D      CCO03_11300 TonB-dependent receptor	K16092 btuB; vitamin B12 transporter
D      CCO03_07905 hypothetical protein	K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D      CCO03_19320 TonB-dependent siderophore receptor	K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D      CCO03_14625 TonB-dependent siderophore receptor	K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D      CCO03_03045 TonB-dependent receptor	K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D      CCO03_01160 hypothetical protein	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      CCO03_04545 TonB-dependent siderophore receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      CCO03_17365 TonB-dependent siderophore receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      CCO03_19335 TonB-dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      CCO03_01675 TonB-dependent siderophore receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      CCO03_16045 TonB-dependent siderophore receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      CCO03_00845 TonB-dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      CCO03_04875 hypothetical protein	K15725 czcC; outer membrane protein, heavy metal efflux system
D      CCO03_18880 hypothetical protein	K15725 czcC; outer membrane protein, heavy metal efflux system
D      CCO03_12550 hypothetical protein	K12340 tolC; outer membrane protein
D      CCO03_06445 transporter	K12543 lapE; outer membrane protein, adhesin transport system
D      CCO03_06350 RND transporter	K18300 oprN; outer membrane protein, multidrug efflux system
D      CCO03_04005 multidrug transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_02525 multidrug transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_16580 hypothetical protein	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_01980 transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_14805 outer membrane protein assembly factor BamA	K07277 SAM50; outer membrane protein insertion porin family
D      CCO03_13570 outer membrane protein assembly factor BamB	K17713 bamB; outer membrane protein assembly factor BamB
D      CCO03_10570 hypothetical protein	K07287 bamC; outer membrane protein assembly factor BamC
D      CCO03_11560 outer membrane protein assembly factor BamD	K05807 bamD; outer membrane protein assembly factor BamD
D      CCO03_02035 hypothetical protein	K06186 bamE; outer membrane protein assembly factor BamE
D      CCO03_10305 outer membrane protein assembly factor	K07278 tamA; translocation and assembly module TamA
D      CCO03_10295 hypothetical protein	K09800 tamB; translocation and assembly module TamB
D      CCO03_03815 hypothetical protein	K21449 ata; trimeric autotransporter adhesin
D      CCO03_18920 lipopolysaccharide transport periplasmic protein LptA	K09774 lptA; lipopolysaccharide export system protein LptA
D      CCO03_00150 LPS export ABC transporter periplasmic protein LptC	K11719 lptC; lipopolysaccharide export system protein LptC
D      CCO03_02355 LPS biosynthesis protein	K04744 lptD; LPS-assembly protein
D      CCO03_02065 hypothetical protein	K03643 lptE; LPS-assembly lipoprotein
D      CCO03_02330 magnesium/cobalt efflux protein	K06189 corC; hemolysin (HlyC) family protein
D      CCO03_04810 hypothetical protein	K06518 cidA; holin-like protein
D      CCO03_04780 CidA/LrgA family protein	K06518 cidA; holin-like protein
D      CCO03_09875 hypothetical protein	K16267 zipB; zinc and cadmium transporter
D      CCO03_06195 ZIP family metal transporter	K07238 TC.ZIP; zinc transporter, ZIP family
D      CCO03_18885 CusA/CzcA family heavy metal efflux RND transporter	K15726 czcA; heavy metal efflux system protein
D      CCO03_04885 CusA/CzcA family heavy metal efflux RND transporter	K15726 czcA; heavy metal efflux system protein
D      CCO03_14725 DoxX family protein	K18305 mexG; transmembrane protein
D      CCO03_03685 multidrug transporter AcrB	K18303 mexK; multidrug efflux pump
D      CCO03_04000 multidrug efflux RND transporter permease subunit	K19594 gesB; gold/copper resistance efflux pump
D      CCO03_02520 multidrug efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      CCO03_06355 multidrug efflux RND transporter permease subunit	K19585 oqxB; multidrug efflux pump
D      CCO03_07715 multidrug transporter subunit MdtC	K07788 mdtB; multidrug efflux pump
D      CCO03_07720 nodulation protein	K07789 mdtC; multidrug efflux pump
D      CCO03_02895 QacE family quaternary ammonium compound efflux SMR transporter	K03297 emrE; small multidrug resistance pump
D      CCO03_13650 QacE family quaternary ammonium compound efflux SMR transporter	K11741 sugE; quaternary ammonium compound-resistance protein SugE
D      CCO03_13185 EamA family transporter	K15268 eamA; O-acetylserine/cysteine efflux transporter
D      CCO03_07775 EamA family transporter	K11939 rhtA; inner membrane transporter RhtA
D      CCO03_04235 hypothetical protein	K09771 TC.SMR3; small multidrug resistance family-3 protein
D      CCO03_07695 gluconate transporter	K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D      CCO03_14385 actP; cation acetate symporter	K14393 actP; cation/acetate symporter
D      CCO03_02760 Na+/H+ antiporter	K24163 nhaK; monovalent cation/hydrogen antiporter
D      CCO03_11185 potassium transporter	K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D      CCO03_18735 potassium transporter Trk	K03498 trkH; trk/ktr system potassium uptake protein
D      CCO03_18730 Trk system potassium transport protein TrkA	K03499 trkA; trk/ktr system potassium uptake protein
D      CCO03_00900 pyrimidine utilization transport protein G	K09016 rutG; putative pyrimidine permease RutG
D      CCO03_07660 xanthine permease XanP	K16345 xanP; xanthine permease XanP
D      CCO03_11275 guanine permease	K06901 pbuG; adenine/guanine/hypoxanthine permease
D      CCO03_07095 benzoate transporter	K05782 benE; benzoate membrane transport protein
D      CCO03_03945 benzoate transporter	K05782 benE; benzoate membrane transport protein
D      CCO03_01590 hypothetical protein	K05782 benE; benzoate membrane transport protein
D      CCO03_17465 chloride channel protein	K03281 clcA; chloride channel protein, CIC family
D      CCO03_07350 chromate transporter	K07240 chrA; chromate transporter
D      CCO03_07355 hypothetical protein	K07240 chrA; chromate transporter
D      CCO03_14895 chromate transporter	K07240 chrA; chromate transporter
D      CCO03_13545 sodium-independent anion transporter	K03321 TC.SULP; sulfate permease, SulP family
D      CCO03_13700 sodium-independent anion transporter	K03321 TC.SULP; sulfate permease, SulP family
D      CCO03_05105 C4-dicarboxylate ABC transporter	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      CCO03_12605 C4-dicarboxylate ABC transporter	K21393 yiaN; TRAP-type transport system large permease protein
D      CCO03_12615 C4-dicarboxylate ABC transporter substrate-binding protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      CCO03_05095 C4-dicarboxylate ABC transporter	K21395 yiaO; TRAP-type transport system periplasmic protein
D      CCO03_14925 arsenical efflux pump membrane protein ArsB	K03893 arsB; arsenical pump membrane protein
D      CCO03_06045 monovalent cation/H+ antiporter subunit A	K05559 phaA; multicomponent K+:H+ antiporter subunit A
D      CCO03_06040 Na+/H+ antiporter subunit C	K05560 phaC; multicomponent K+:H+ antiporter subunit C
D      CCO03_06035 monovalent cation/H+ antiporter subunit D	K05561 phaD; multicomponent K+:H+ antiporter subunit D
D      CCO03_06030 Na+/H+ antiporter subunit E	K05562 phaE; multicomponent K+:H+ antiporter subunit E
D      CCO03_06025 K+/H+ antiporter subunit F	K05563 phaF; multicomponent K+:H+ antiporter subunit F
D      CCO03_06020 Na+/H+ antiporter subunit G	K05564 phaG; multicomponent K+:H+ antiporter subunit G
D      CCO03_04165 murein biosynthesis integral membrane protein MurJ	K03980 murJ; putative peptidoglycan lipid II flippase
D      CCO03_02900 hypothetical protein	K13936 mdcF; malonate transporter and related proteins
D      CCO03_05550 transporter	K13936 mdcF; malonate transporter and related proteins
D      CCO03_12525 transporter	K13936 mdcF; malonate transporter and related proteins
D      CCO03_01645 potassium transporter Kup	K03549 kup; KUP system potassium uptake protein
D      CCO03_05980 lysine transporter LysE	K05834 rhtB; homoserine/homoserine lactone efflux protein
D      CCO03_05590 lysine transporter LysE	K05835 rhtC; threonine efflux protein
D      CCO03_00625 lysine transporter LysE	K11250 leuE; leucine efflux protein
D      CCO03_18545 branched-chain amino acid ABC transporter permease	K26605 azlC; branched chain amino acid efflux pump
D      CCO03_18540 branched-chain amino acid transporter	K26606 azlD; branched chain amino acid efflux pump
D      CCO03_16740 hypothetical protein	K07793 tctA; putative tricarboxylic transport membrane protein
D      CCO03_06790 hypothetical protein	K07793 tctA; putative tricarboxylic transport membrane protein
D      CCO03_00120 hypothetical protein	K09125 yhhQ; queuosine precursor transporter
D      CCO03_06670 hypothetical protein	K22736 VIT; vacuolar iron transporter family protein
D      CCO03_15575 antibiotic resistance protein	K05595 marC; multiple antibiotic resistance protein
D      CCO03_17550 putative lipid II flippase FtsW	K03588 ftsW; cell division protein FtsW
D      CCO03_15390 hypothetical protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      CCO03_01820 hypothetical protein	K07243 FTR; high-affinity iron transporter
D      CCO03_01885 hypothetical protein	K15383 K15383; MtN3 and saliva related transmembrane protein
D      CCO03_03800 hypothetical protein	K03832 tonB; periplasmic protein TonB
D      CCO03_09560 hypothetical protein	K03832 tonB; periplasmic protein TonB
D      CCO03_03070 energy transducer TonB	K03832 tonB; periplasmic protein TonB
D      CCO03_09385 peptidoglycan-associated lipoprotein	K03640 pal; peptidoglycan-associated lipoprotein
D      CCO03_06465 flagellar motor protein MotB	K03640 pal; peptidoglycan-associated lipoprotein
D      CCO03_10660 protein TolA	K03646 tolA; colicin import membrane protein
D      CCO03_09380 Tol-Pal system beta propeller repeat protein TolB	K03641 tolB; TolB protein
D      CCO03_13035 efflux transporter periplasmic adaptor subunit	K03543 emrA; membrane fusion protein, multidrug efflux system
D      CCO03_05250 EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit	K03543 emrA; membrane fusion protein, multidrug efflux system
D      CCO03_18890 hypothetical protein	K15727 czcB; membrane fusion protein, heavy metal efflux system
D      CCO03_04880 hypothetical protein	K15727 czcB; membrane fusion protein, heavy metal efflux system
D      CCO03_06450 secretion protein HylD	K12542 lapC; membrane fusion protein, adhesin transport system
D      CCO03_03680 efflux transporter periplasmic adaptor subunit	K18302 mexJ; membrane fusion protein, multidrug efflux system
D      CCO03_03995 efflux transporter periplasmic adaptor subunit	K19595 gesA; membrane fusion protein, gold/copper resistance efflux system
D      CCO03_01990 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_02515 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_06360 efflux transporter periplasmic adaptor subunit	K19586 oqxA; membrane fusion protein, multidrug efflux system
D      CCO03_07710 hypothetical protein	K07799 mdtA; membrane fusion protein, multidrug efflux system
D      CCO03_06515 ferrous iron transport protein A	K04758 feoA; ferrous iron transport protein A
D      CCO03_06520 ferrous iron transport protein B	K04759 feoB; ferrous iron transport protein B
D      CCO03_02890 methyltransferase	K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C    02044 Secretion system [BR:cser02044]
D      CCO03_12550 hypothetical protein	K12340 tolC; outer membrane protein
D      CCO03_06450 secretion protein HylD	K12542 lapC; membrane fusion protein, adhesin transport system
D      CCO03_06445 transporter	K12543 lapE; outer membrane protein, adhesin transport system
D      CCO03_18080 type II secretion system protein GspD	K02453 gspD; general secretion pathway protein D
D      CCO03_17865 hypothetical protein	K02453 gspD; general secretion pathway protein D
D      CCO03_18075 type II secretion system protein GspE	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      CCO03_17920 type II secretion system protein GspE	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      CCO03_06780 type II secretion system protein E	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      CCO03_17915 type II secretion system protein F	K02455 gspF; general secretion pathway protein F
D      CCO03_07005 type II secretion system protein GspF	K02455 gspF; general secretion pathway protein F
D      CCO03_18120 type II secretion system protein GspG	K02456 gspG; general secretion pathway protein G
D      CCO03_17910 type II secretion system protein GspG	K02456 gspG; general secretion pathway protein G
D      CCO03_18285 hypothetical protein	K02456 gspG; general secretion pathway protein G
D      CCO03_18115 type II secretion system protein GspH	K02457 gspH; general secretion pathway protein H
D      CCO03_17905 type II secretion system protein GspH	K02457 gspH; general secretion pathway protein H
D      CCO03_18110 type II secretion system protein GspI	K02458 gspI; general secretion pathway protein I
D      CCO03_17900 hypothetical protein	K02458 gspI; general secretion pathway protein I
D      CCO03_18105 hypothetical protein	K02459 gspJ; general secretion pathway protein J
D      CCO03_17895 hypothetical protein	K02459 gspJ; general secretion pathway protein J
D      CCO03_18100 hypothetical protein	K02460 gspK; general secretion pathway protein K
D      CCO03_17890 hypothetical protein	K02460 gspK; general secretion pathway protein K
D      CCO03_18095 hypothetical protein	K02461 gspL; general secretion pathway protein L
D      CCO03_18090 hypothetical protein	K02462 gspM; general secretion pathway protein M
D      CCO03_18085 general secretion pathway protein GspN	K02463 gspN; general secretion pathway protein N
D      CCO03_18970 hypothetical protein	K02650 pilA; type IV pilus assembly protein PilA
D      CCO03_18975 prepilin-type cleavage/methylation domain-containing protein	K02650 pilA; type IV pilus assembly protein PilA
D      CCO03_15775 type IV-A pilus assembly ATPase PilB	K02652 pilB; type IV pilus assembly protein PilB
D      CCO03_15780 type II secretion system protein F	K02653 pilC; type IV pilus assembly protein PilC
D      CCO03_14995 hypothetical protein	K02655 pilE; type IV pilus assembly protein PilE
D      CCO03_13595 hypothetical protein	K02656 pilF; type IV pilus assembly protein PilF
D      CCO03_11740 two-component system response regulator	K02657 pilG; twitching motility two-component system response regulator PilG
D      CCO03_11735 two-component system response regulator	K02658 pilH; twitching motility two-component system response regulator PilH
D      CCO03_11730 hypothetical protein	K02659 pilI; twitching motility protein PilI
D      CCO03_11725 chemotaxis protein	K02660 pilJ; twitching motility protein PilJ
D      CCO03_16190 pilus assembly protein PilM	K02662 pilM; type IV pilus assembly protein PilM
D      CCO03_16185 fimbrial protein	K02663 pilN; type IV pilus assembly protein PilN
D      CCO03_16180 pilus assembly protein PilO	K02664 pilO; type IV pilus assembly protein PilO
D      CCO03_16175 hypothetical protein	K02665 pilP; type IV pilus assembly protein PilP
D      CCO03_16170 secretin	K02666 pilQ; type IV pilus assembly protein PilQ
D      CCO03_15580 twitching motility protein PilT	K02669 pilT; twitching motility protein PilT
D      CCO03_08345 type IV pili twitching motility protein PilT	K02670 pilU; twitching motility protein PilU
D      CCO03_15585 type IV pili twitching motility protein PilT	K02670 pilU; twitching motility protein PilU
D      CCO03_15015 type IV pilus modification protein PilV	K02671 pilV; type IV pilus assembly protein PilV
D      CCO03_15010 hypothetical protein	K02672 pilW; type IV pilus assembly protein PilW
D      CCO03_15005 hypothetical protein	K02673 pilX; type IV pilus assembly protein PilX
D      CCO03_15000 hypothetical protein	K02674 pilY1; type IV pilus assembly protein PilY1
D      CCO03_12820 pilus assembly protein PilZ	K02676 pilZ; type IV pilus assembly protein PilZ
D      CCO03_15020 hypothetical protein	K08084 fimT; type IV fimbrial biogenesis protein FimT
D      CCO03_14295 hypothetical protein	K08086 fimV; pilus assembly protein FimV
D      CCO03_06435 hypothetical protein	K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D      CCO03_06430 Flp pilus assembly protein CpaB	K02279 cpaB; pilus assembly protein CpaB
D      CCO03_06425 type II and III secretion system protein	K02280 cpaC; pilus assembly protein CpaC
D      CCO03_06420 hypothetical protein	K02282 cpaE; pilus assembly protein CpaE
D      CCO03_06415 pilus assembly protein CpaF	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      CCO03_06410 secretion system protein	K12510 tadB; tight adherence protein B
D      CCO03_06405 secretion system protein	K12511 tadC; tight adherence protein C
D      CCO03_06400 hypothetical protein	K27079 tadD; tight adherence protein D
D      CCO03_06380 hypothetical protein	K27080 tadG; tight adherence protein G
D      CCO03_06440 Flp family type IVb pilin	K02651 flp; pilus assembly protein Flp/PilA
D      CCO03_17250 hypothetical protein	K02221 yggT; YggT family protein
D      CCO03_15540 hypothetical protein	K02237 comEA; competence protein ComEA
D      CCO03_09035 DNA internalization-related competence protein ComEC/Rec2	K02238 comEC; competence protein ComEC
D      CCO03_07385 disulfide isomerase	K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D      CCO03_00055 hypothetical protein	K12686 apeE; outer membrane lipase/esterase
D      CCO03_15820 preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      CCO03_15355 protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      CCO03_18585 protein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      CCO03_19210 preprotein translocase subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      CCO03_18580 protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      CCO03_04985 preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      CCO03_18450 preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      CCO03_15700 signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      CCO03_14145 signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      CCO03_18590 preprotein translocase subunit YajC	K03210 yajC; preprotein translocase subunit YajC
D      CCO03_00190 membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      CCO03_05180 twin-arginine translocase subunit TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      CCO03_05185 tatB; twin-arginine translocase subunit TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      CCO03_05190 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
C    02042 Bacterial toxins [BR:cser02042]
D      CCO03_11585 hypothetical protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      CCO03_16735 hypothetical protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
C    02022 Two-component system [BR:cser02022]
D      CCO03_06115 hypothetical protein	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      CCO03_06110 phosphate regulon transcriptional regulatory protein PhoB	K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D      CCO03_14210 two-component sensor histidine kinase	K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D      CCO03_14205 two-component system response regulator OmpR	K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D      CCO03_19015 two-component sensor histidine kinase	K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D      CCO03_00540 two-component system sensor histidine kinase CreC	K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D      CCO03_00535 two-component system response regulator CreB	K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D      CCO03_04855 hypothetical protein	K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D      CCO03_04860 DNA-binding response regulator	K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D      CCO03_16455 histidine kinase	K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D      CCO03_16450 DNA-binding response regulator	K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D      CCO03_07890 hypothetical protein	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      CCO03_07615 hypothetical protein	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      CCO03_00870 histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      CCO03_18895 DNA-binding response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      CCO03_07885 DNA-binding response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      CCO03_05125 DNA-binding response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      CCO03_07620 DNA-binding response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      CCO03_00875 DNA-binding response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      CCO03_09845 DNA-binding response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      CCO03_15830 DNA-binding response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      CCO03_13350 DNA-binding response regulator	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      CCO03_15630 hypothetical protein	K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D      CCO03_11710 hypothetical protein	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      CCO03_11705 DNA-binding response regulator	K08083 algR; two-component system, LytTR family, response regulator AlgR
D      CCO03_04915 PAS domain-containing sensor histidine kinase	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      CCO03_04920 nitrogen regulation protein NR(I)	K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D      CCO03_19150 two-component system response regulator	K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D      CCO03_15715 hypothetical protein	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      CCO03_15720 sigma-54-dependent Fis family transcriptional regulator	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      CCO03_01600 hypothetical protein	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      CCO03_11720 hypothetical protein	K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D      CCO03_11740 two-component system response regulator	K02657 pilG; twitching motility two-component system response regulator PilG
D      CCO03_11735 two-component system response regulator	K02658 pilH; twitching motility two-component system response regulator PilH
D      CCO03_02640 hypothetical protein	K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D      CCO03_02645 DNA-binding response regulator	K11712 dctR; two-component system, LuxR family, response regulator DctR
D      CCO03_10790 histidine kinase	K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D      CCO03_10795 two-component system response regulator	K15012 regA; two-component system, response regulator RegA
C    02035 Bacterial motility proteins [BR:cser02035]
D      CCO03_11740 two-component system response regulator	K02657 pilG; twitching motility two-component system response regulator PilG
D      CCO03_11735 two-component system response regulator	K02658 pilH; twitching motility two-component system response regulator PilH
D      CCO03_11730 hypothetical protein	K02659 pilI; twitching motility protein PilI
D      CCO03_11725 chemotaxis protein	K02660 pilJ; twitching motility protein PilJ
D      CCO03_11720 hypothetical protein	K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D      CCO03_15720 sigma-54-dependent Fis family transcriptional regulator	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      CCO03_15715 hypothetical protein	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      CCO03_15580 twitching motility protein PilT	K02669 pilT; twitching motility protein PilT
D      CCO03_08345 type IV pili twitching motility protein PilT	K02670 pilU; twitching motility protein PilU
D      CCO03_15585 type IV pili twitching motility protein PilT	K02670 pilU; twitching motility protein PilU
D      CCO03_18970 hypothetical protein	K02650 pilA; type IV pilus assembly protein PilA
D      CCO03_18975 prepilin-type cleavage/methylation domain-containing protein	K02650 pilA; type IV pilus assembly protein PilA
D      CCO03_15775 type IV-A pilus assembly ATPase PilB	K02652 pilB; type IV pilus assembly protein PilB
D      CCO03_15780 type II secretion system protein F	K02653 pilC; type IV pilus assembly protein PilC
D      CCO03_13595 hypothetical protein	K02656 pilF; type IV pilus assembly protein PilF
D      CCO03_16170 secretin	K02666 pilQ; type IV pilus assembly protein PilQ
D      CCO03_16175 hypothetical protein	K02665 pilP; type IV pilus assembly protein PilP
D      CCO03_16180 pilus assembly protein PilO	K02664 pilO; type IV pilus assembly protein PilO
D      CCO03_16185 fimbrial protein	K02663 pilN; type IV pilus assembly protein PilN
D      CCO03_16190 pilus assembly protein PilM	K02662 pilM; type IV pilus assembly protein PilM
D      CCO03_12820 pilus assembly protein PilZ	K02676 pilZ; type IV pilus assembly protein PilZ
D      CCO03_15015 type IV pilus modification protein PilV	K02671 pilV; type IV pilus assembly protein PilV
D      CCO03_15010 hypothetical protein	K02672 pilW; type IV pilus assembly protein PilW
D      CCO03_15005 hypothetical protein	K02673 pilX; type IV pilus assembly protein PilX
D      CCO03_15000 hypothetical protein	K02674 pilY1; type IV pilus assembly protein PilY1
D      CCO03_14995 hypothetical protein	K02655 pilE; type IV pilus assembly protein PilE
D      CCO03_06440 Flp family type IVb pilin	K02651 flp; pilus assembly protein Flp/PilA
D      CCO03_06435 hypothetical protein	K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D      CCO03_06430 Flp pilus assembly protein CpaB	K02279 cpaB; pilus assembly protein CpaB
D      CCO03_06425 type II and III secretion system protein	K02280 cpaC; pilus assembly protein CpaC
D      CCO03_06420 hypothetical protein	K02282 cpaE; pilus assembly protein CpaE
D      CCO03_06415 pilus assembly protein CpaF	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C    03037 Cilium and associated proteins
C    04812 Cytoskeleton proteins [BR:cser04812]
D      CCO03_01530 rod shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      CCO03_17520 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      CCO03_17525 cell division protein FtsA	K03590 ftsA; cell division protein FtsA
D      CCO03_19305 septum site-determining protein MinC	K03610 minC; septum site-determining protein MinC
D      CCO03_19300 septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
D      CCO03_19295 cell division topological specificity factor MinE	K03608 minE; cell division topological specificity factor
D      CCO03_00630 chromosome partitioning protein	K03496 parA; chromosome partitioning protein
D      CCO03_00675 cobyrinic acid a,c-diamide synthase	K03496 parA; chromosome partitioning protein
D      CCO03_01165 chromosome partitioning protein ParB	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C    04147 Exosome [BR:cser04147]
D      CCO03_18860 molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
D      CCO03_00975 fructose bisphosphate aldolase	K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      CCO03_11165 phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      CCO03_00035 type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      CCO03_18395 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      CCO03_00970 pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      CCO03_07195 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      CCO03_07510 chaperonin GroL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      CCO03_04390 molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      CCO03_17505 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      CCO03_10855 IMP dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      CCO03_01010 elongation factor Tu	K02358 tuf; elongation factor Tu
D      CCO03_19220 elongation factor Tu	K02358 tuf; elongation factor Tu
D      CCO03_01955 HIT family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      CCO03_15395 bile acid:sodium symporter	K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D      CCO03_13450 hypothetical protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09485 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_12060 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_06145 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_03865 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_09225 acyl-CoA synthetase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      CCO03_05495 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_07760 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_12320 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09350 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18710 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_16745 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_09645 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_10365 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_06805 acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      CCO03_18015 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      CCO03_12220 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      CCO03_00165 adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      CCO03_11715 argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      CCO03_00125 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      CCO03_12710 fumarylacetoacetase	K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D      CCO03_14940 fructose-bisphosphatase class I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      CCO03_18510 glycerol kinase	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      CCO03_04905 type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      CCO03_00100 delta-aminolevulinic acid dehydratase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      CCO03_05660 4-hydroxyphenylpyruvate dioxygenase	K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D      CCO03_10240 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      CCO03_07465 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      CCO03_12975 3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      CCO03_14240 peptidase M48	K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D      CCO03_06265 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_10890 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      CCO03_09090 electron transfer flavoprotein subunit alpha	K03522 fixB; electron transfer flavoprotein alpha subunit
D      CCO03_01395 electron transfer flavoprotein subunit alpha	K03522 fixB; electron transfer flavoprotein alpha subunit
D      CCO03_00610 glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      CCO03_04980 triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      CCO03_15370 gpmA; phosphoglyceromutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      CCO03_16480 hypothetical protein	K03098 APOD; apolipoprotein D and lipocalin family protein
D      CCO03_14465 hypothetical protein	K03098 APOD; apolipoprotein D and lipocalin family protein
C    02048 Prokaryotic defense system [BR:cser02048]
D      CCO03_06710 subtype I-E CRISPR-associated endonuclease Cas1	K15342 cas1; CRISP-associated protein Cas1
D      CCO03_06715 type I-E CRISPR-associated endoribonuclease Cas2	K09951 cas2; CRISPR-associated protein Cas2
D      CCO03_06680 hypothetical protein	K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D      CCO03_06685 type I-E CRISPR-associated protein Cse1/CasA	K19123 casA; CRISPR system Cascade subunit CasA
D      CCO03_06690 type I-E CRISPR-associated protein Cse2/CasB	K19046 casB; CRISPR system Cascade subunit CasB
D      CCO03_06695 type I-E CRISPR-associated protein Cas7/Cse4/CasC	K19124 casC; CRISPR system Cascade subunit CasC
D      CCO03_06700 type I-E CRISPR-associated protein Cas5/CasD	K19125 casD; CRISPR system Cascade subunit CasD
D      CCO03_06705 type I-E CRISPR-associated protein Cas6/Cse3/CasE	K19126 casE; CRISPR system Cascade subunit CasE
D      CCO03_12260 hypothetical protein	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D      CCO03_00750 restriction endonuclease subunit R	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D      CCO03_08490 DNA (cytosine-5-)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      CCO03_08700 hypothetical protein	K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D      CCO03_11325 hypothetical protein	K07448 mrr; restriction system protein
D      CCO03_08690 cytotoxic translational repressor of toxin-antitoxin stability system	K06218 relE; mRNA interferase RelE/StbE
D      CCO03_15310 regulator	K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D      CCO03_03975 XRE family transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D      CCO03_13495 XRE family transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D      CCO03_08665 hypothetical protein	K18843 hicB; antitoxin HicB
D      CCO03_16875 hypothetical protein	K07334 higB-1; toxin HigB-1
D      CCO03_17520 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      CCO03_01530 rod shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      CCO03_09785 DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      CCO03_09775 DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      CCO03_15105 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      CCO03_12965 succinate dehydrogenase assembly factor 2	K09159 cptB; antitoxin CptB
D      CCO03_13160 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C    04030 G protein-coupled receptors
C    04050 Cytokine receptors
C    04054 Pattern recognition receptors
C    03310 Nuclear receptors
C    04040 Ion channels
C    04031 GTP-binding proteins
C    04052 Cytokines and neuropeptides
C    04515 Cell adhesion molecules
C    04090 CD molecules
C    01504 Antimicrobial resistance genes [BR:cser01504]
D      CCO03_15430 MFS transporter	K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D      CCO03_12125 MFS transporter	K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D      CCO03_12170 class A beta-lactamase	K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D      CCO03_04855 hypothetical protein	K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D      CCO03_04860 DNA-binding response regulator	K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D      CCO03_01990 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_02515 efflux transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      CCO03_02520 multidrug efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      CCO03_04005 multidrug transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_02525 multidrug transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_16580 hypothetical protein	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_01980 transporter	K18139 oprM; outer membrane protein, multidrug efflux system
D      CCO03_06350 RND transporter	K18300 oprN; outer membrane protein, multidrug efflux system
D      CCO03_03680 efflux transporter periplasmic adaptor subunit	K18302 mexJ; membrane fusion protein, multidrug efflux system
D      CCO03_03685 multidrug transporter AcrB	K18303 mexK; multidrug efflux pump
D      CCO03_15335 Cu(I)-responsive transcriptional regulator	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D      CCO03_03995 efflux transporter periplasmic adaptor subunit	K19595 gesA; membrane fusion protein, gold/copper resistance efflux system
D      CCO03_04000 multidrug efflux RND transporter permease subunit	K19594 gesB; gold/copper resistance efflux pump
D      CCO03_12550 hypothetical protein	K12340 tolC; outer membrane protein
C    00535 Proteoglycans
C    00536 Glycosaminoglycan binding proteins
C    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C    04091 Lectins
C    04990 Domain-containing proteins not elsewhere classified
B
B  09185 Viral protein families
C    03200 Viral proteins
C    03210 Viral fusion proteins
B
B  09184 RNA family
C    03100 Non-coding RNAs [BR:cser03100]
D      CCO03_15085 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_18160 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_11240 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_15100 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_18185 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_18210 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_18235 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      CCO03_10290 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_02505 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_03405 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_11210 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_08545 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_16635 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      CCO03_04485 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      CCO03_04475 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      CCO03_15075 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      CCO03_15090 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      CCO03_03720 tRNA-Cys	K14222 tRNA-Cys; tRNA Cys
D      CCO03_16540 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      CCO03_15080 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      CCO03_15095 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      CCO03_03715 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_05350 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_03725 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_18400 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_19230 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      CCO03_07955 tRNA-His	K14226 tRNA-His; tRNA His
D      CCO03_18165 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      CCO03_18190 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      CCO03_18215 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      CCO03_18240 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      CCO03_04990 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_03690 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_15200 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_15205 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_15210 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_04940 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_03835 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      CCO03_14570 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      CCO03_09400 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      CCO03_18415 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      CCO03_15640 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      CCO03_16430 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      CCO03_19145 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      CCO03_06335 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      CCO03_07755 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      CCO03_15690 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      CCO03_13390 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      CCO03_10705 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      CCO03_04040 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      CCO03_15865 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      CCO03_19225 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      CCO03_14935 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      CCO03_19215 tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      CCO03_19235 tRNA-Tyr	K14236 tRNA-Tyr; tRNA Tyr
D      CCO03_13115 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      CCO03_14160 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      CCO03_07940 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      CCO03_13120 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      CCO03_18170 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18195 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18220 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18245 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      CCO03_18155 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18180 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18205 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18230 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      CCO03_18150 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18175 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18200 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_18225 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      CCO03_09725 ffs; signal recognition particle sRNA small type	K01983 ffs; SRP RNA
D      CCO03_03500 rnpB; RNase P RNA component class A	K01978 rnpB; M1 RNA
D      CCO03_17180 ssrA; transfer-messenger RNA	K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B  09191 Unclassified: metabolism
C    99980 Enzymes with EC numbers
D      CCO03_05275 hypothetical protein	K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D      CCO03_12310 short-chain dehydrogenase	K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D      CCO03_12165 2,5-didehydrogluconate reductase B	K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D      CCO03_06240 hypothetical protein	K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D      CCO03_18595 indolepyruvate ferredoxin oxidoreductase	K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D      CCO03_11130 NADP-dependent oxidoreductase	K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D      CCO03_13935 electron transfer flavoprotein-ubiquinone oxidoreductase	K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D      CCO03_05440 quinone oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      CCO03_07295 hypothetical protein	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      CCO03_04975 NAD(P)H-quinone oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      CCO03_14115 NADPH:quinone oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      CCO03_01455 quinone oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      CCO03_05810 quinone oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      CCO03_01370 nitronate monooxygenase	K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      CCO03_02730 nitronate monooxygenase	K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      CCO03_17775 nitronate monooxygenase	K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      CCO03_11660 FMN-dependent NADH-azoreductase	K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D      CCO03_11675 alkyl hydroperoxide reductase subunit F	K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D      CCO03_12530 peptide-methionine (S)-S-oxide reductase	K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D      CCO03_09675 peptide-methionine (R)-S-oxide reductase	K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D      CCO03_09340 glutathione S-transferase	K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D      CCO03_00645 glutathione S-transferase	K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D      CCO03_10175 glutathione S-transferase	K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D      CCO03_05805 thiol:disulfide oxidoreductase	K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D      CCO03_17700 mononuclear molybdenum enzyme YedY	K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D      CCO03_09130 peroxiredoxin	K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      CCO03_16705 peroxiredoxin	K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      CCO03_11670 peroxiredoxin	K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D      CCO03_05445 OsmC family peroxiredoxin	K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D      CCO03_09855 peroxiredoxin	K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D      CCO03_07175 peroxiredoxin	K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D      CCO03_11925 peroxidase	K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D      CCO03_06865 hypothetical protein	K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D      CCO03_16760 pirin	K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D      CCO03_00770 quercetin 2,3-dioxygenase	K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D      CCO03_01735 hypothetical protein	K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D      CCO03_16080 cysteine dioxygenase	K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D      CCO03_03605 Fe2+-dependent dioxygenase	K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D      CCO03_11835 Fe2+-dependent dioxygenase	K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D      CCO03_03270 nitric oxide dioxygenase	K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D      CCO03_02795 copper oxidase	K22348 moxA; manganese oxidase [EC:1.16.3.3]
D      CCO03_05560 ferredoxin--NADP(+) reductase	K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D      CCO03_14920 arsenate reductase (glutaredoxin)	K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D      CCO03_02550 arsenate reductase (glutaredoxin)	K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D      CCO03_12540 protein-L-isoaspartate O-methyltransferase	K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D      CCO03_14105 protein-L-isoaspartate O-methyltransferase	K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D      CCO03_18605 SAM-dependent methyltransferase	K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D      CCO03_10830 SAM-dependent methyltransferase	K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D      CCO03_12930 trans-aconitate 2-methyltransferase	K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D      CCO03_12535 maltose acetyltransferase	K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D      CCO03_02325 apolipoprotein N-acyltransferase	K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D      CCO03_10550 GNAT family N-acetyltransferase	K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D      CCO03_05420 GNAT family N-acetyltransferase	K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D      CCO03_09610 leucyl/phenylalanyl-tRNA--protein transferase	K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D      CCO03_09060 hypothetical protein	K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D      CCO03_09605 arginyltransferase	K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D      CCO03_07830 glycosyl transferase family 1	K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D      CCO03_11010 prolipoprotein diacylglyceryl transferase	K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D      CCO03_11855 hypothetical protein	K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D      CCO03_09415 phosphoenolpyruvate synthase regulatory protein	K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D      CCO03_02625 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase	K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D      CCO03_00390 hypothetical protein	K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D      CCO03_09680 hypothetical protein	K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D      CCO03_10600 pyruvate, phosphate dikinase	K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D      CCO03_18705 bifunctional isocitrate dehydrogenase kinase/phosphatase	K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D      CCO03_02020 HPr kinase/phosphorylase	K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D      CCO03_10645 4-hydroxybenzoyl-CoA thioesterase	K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D      CCO03_15925 thioesterase	K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D      CCO03_05085 protein tyrosine phosphatase	K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D      CCO03_04220 phosphatase	K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D      CCO03_06075 histidine phosphatase family protein	K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D      CCO03_09805 DNAase	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      CCO03_06765 DNAase	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      CCO03_08805 endolysin	K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D      CCO03_16930 lysozyme	K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D      CCO03_03030 peptide deformylase	K01462 PDF; peptide deformylase [EC:3.5.1.88]
D      CCO03_18560 peptide deformylase	K01462 PDF; peptide deformylase [EC:3.5.1.88]
D      CCO03_02935 acylase	K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D      CCO03_10070 polysaccharide deacetylase family protein	K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D      CCO03_02635 acyltransferase	K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D      CCO03_06845 peptidase A8	K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D      CCO03_06560 agmatinase	K18459 gpuA; guanidinopropionase [EC:3.5.3.17]
D      CCO03_15620 endoribonuclease L-PSP	K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D      CCO03_01960 copper-translocating P-type ATPase	K19597 golT; Au+-exporting ATPase [EC:3.6.1.-]
D      CCO03_04680 septum formation inhibitor Maf	K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D      CCO03_09070 AAA family ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      CCO03_06755 ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      CCO03_00635 alpha/beta hydrolase	K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D      CCO03_14850 NAD(P)H-hydrate dehydratase	K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D      CCO03_00235 hydroxypyruvate isomerase	K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D      CCO03_11075 hypothetical protein	K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D      CCO03_19120 fatty acid--CoA ligase	K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D      CCO03_10030 cyanophycin synthetase	K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D      CCO03_10035 cyanophycin synthetase	K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D      CCO03_15770 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D      CCO03_04765 RNA 3'-phosphate cyclase	K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D      CCO03_12780 ferredoxin	K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D      CCO03_02810 heavy metal translocating P-type ATPase	K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C    99981 Carbohydrate metabolism
C    99982 Energy metabolism
D      CCO03_02715 2Fe-2S ferredoxin	K04755 fdx; ferredoxin, 2Fe-2S
D      CCO03_13130 ISC system 2Fe-2S type ferredoxin	K04755 fdx; ferredoxin, 2Fe-2S
D      CCO03_12500 ferredoxin	K05524 fdxA; ferredoxin
D      CCO03_13155 Fe-S cluster assembly scaffold IscU	K04488 iscU; nitrogen fixation protein NifU and related proteins
D      CCO03_02480 hypothetical protein	K02448 norD; nitric oxide reductase NorD protein
D      CCO03_01825 hypothetical protein	K02448 norD; nitric oxide reductase NorD protein
D      CCO03_01830 AAA family ATPase	K04748 norQ; nitric oxide reductase NorQ protein
D      CCO03_02485 AAA family ATPase	K04748 norQ; nitric oxide reductase NorQ protein
D      CCO03_09085 electron transporter RnfB	K03521 fixA; electron transfer flavoprotein beta subunit
D      CCO03_01390 electron transporter RnfB	K03521 fixA; electron transfer flavoprotein beta subunit
C    99983 Lipid metabolism
D      CCO03_04560 DNA alkylation response protein	K09456 aidB; putative acyl-CoA dehydrogenase
D      CCO03_06910 isovaleryl-CoA dehydrogenase	K09456 aidB; putative acyl-CoA dehydrogenase
C    99984 Nucleotide metabolism
C    99985 Amino acid metabolism
D      CCO03_03950 YggS family pyridoxal phosphate enzyme	K06997 yggS; PLP dependent protein
D      CCO03_05410 YggS family pyridoxal phosphate enzyme	K06997 yggS; PLP dependent protein
D      CCO03_06950 GNAT family N-acetyltransferase	K22479 argA; N-acetyltransferase
C    99986 Glycan metabolism
D      CCO03_17240 hypothetical protein	K08992 lapA; lipopolysaccharide assembly protein A
D      CCO03_17245 lipopolysaccharide assembly protein LapB	K19804 lapB; lipopolysaccharide assembly protein B
D      CCO03_16255 hypothetical protein	K07027 K07027; glycosyltransferase 2 family protein
C    99987 Cofactor metabolism
D      CCO03_05295 cobalamin biosynthesis protein CobW	K02234 cobW; cobalamin biosynthesis protein CobW
D      CCO03_11685 hypothetical protein	K02498 hemY; HemY protein
D      CCO03_06985 ubiquinone biosynthesis regulatory protein kinase UbiB	K03688 ubiB; ubiquinone biosynthesis protein
D      CCO03_06980 hypothetical protein	K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D      CCO03_05310 hypothetical protein	K13580 K13580; magnesium chelatase subunit ChlD-like protein
C    99988 Secondary metabolism
D      CCO03_16025 NADPH-dependent FMN reductase	K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C    99999 Others
D      CCO03_14980 phospholipase	K06999 K06999; phospholipase/carboxylesterase
D      CCO03_00375 GNAT family N-acetyltransferase	K09181 yfiQ; acetyltransferase
B
B  09192 Unclassified: genetic information processing
C    99973 Transcription
D      CCO03_10360 cold shock domain protein CspD	K03704 cspA; cold shock protein
D      CCO03_00355 transcriptional regulator	K04752 glnK; nitrogen regulatory protein P-II 2
D      CCO03_09525 RNA-binding transcriptional accessory protein	K06959 tex; protein Tex
C    99974 Translation
C    99975 Protein processing
D      CCO03_10355 ATP-dependent Clp protease adapter ClpS	K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D      CCO03_03695 trigger factor	K03545 tig; trigger factor
D      CCO03_17695 sulfoxide reductase heme-binding subunit YedZ	K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D      CCO03_00815 urease accessory protein UreE	K03187 ureE; urease accessory protein
D      CCO03_01775 Urease accessory protein ureE 1	K03187 ureE; urease accessory protein
D      CCO03_00810 urease accessory protein UreF	K03188 ureF; urease accessory protein
D      CCO03_01780 hypothetical protein	K03188 ureF; urease accessory protein
D      CCO03_00800 urease accessory protein UreG	K03189 ureG; urease accessory protein
D      CCO03_01795 urease accessory protein UreG	K03189 ureG; urease accessory protein
D      CCO03_00855 urease accessory protein	K03190 ureD; urease accessory protein
D      CCO03_01800 hypothetical protein	K03190 ureD; urease accessory protein
D      CCO03_18535 hypothetical protein	K03192 ureJ; urease accessory protein
D      CCO03_00835 urease accessory protein UreJ	K03192 ureJ; urease accessory protein
D      CCO03_01765 urease accessory protein UreJ	K03192 ureJ; urease accessory protein
D      CCO03_09695 SsrA-binding protein	K03664 smpB; SsrA-binding protein
D      CCO03_00350 ATP-dependent protease	K07391 comM; magnesium chelatase family protein
D      CCO03_11970 peptidase	K07395 K07395; putative proteasome-type protease
D      CCO03_17770 osmotically inducible protein C	K07397 yhfA; putative redox protein
D      CCO03_05985 peroxiredoxin	K07397 yhfA; putative redox protein
D      CCO03_17710 cytochrome C biogenesis protein ResB	K07399 resB; cytochrome c biogenesis protein
C    99976 Replication and repair
D      CCO03_16800 hypothetical protein	K07454 K07454; putative restriction endonuclease
D      CCO03_11200 hypothetical protein	K03630 radC; DNA repair protein RadC
D      CCO03_09585 DNA recombination protein RmuC	K09760 rmuC; DNA recombination protein RmuC
D      CCO03_03470 YraN family protein	K07460 yraN; putative endonuclease
D      CCO03_18570 DNA protecting protein DprA	K04096 smf; DNA processing protein
D      CCO03_15500 recombination factor protein RarA	K07478 ycaJ; putative ATPase
D      CCO03_03750 hypothetical protein	K06919 K06919; putative DNA primase/helicase
D      CCO03_03585 hypothetical protein	K07491 rayT; REP-associated tyrosine transposase
D      CCO03_14560 hypothetical protein	K07497 K07497; putative transposase
D      CCO03_03765 hypothetical protein	K07497 K07497; putative transposase
D      CCO03_17175 integrase	K14059 int; integrase
C    99979 Viral proteins
C    99998 Others
D      CCO03_09740 YbaB/EbfC family nucleoid-associated protein	K09747 ebfC; nucleoid-associated protein EbfC
B
B  09193 Unclassified: signaling and cellular processes
C    99977 Transport
D      CCO03_10820 MFS transporter	K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D      CCO03_08015 amino acid permease	K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D      CCO03_12365 anion permease	K03306 TC.PIT; inorganic phosphate transporter, PiT family
D      CCO03_13745 sodium:solute symporter	K03307 TC.SSS; solute:Na+ symporter, SSS family
C    99978 Cell growth
D      CCO03_12875 septation protein A	K06190 ispZ; intracellular septation protein
D      CCO03_10450 SpoVR family protein	K06415 spoVR; stage V sporulation protein R
C    99993 Cell motility
C    99995 Signaling proteins
D      CCO03_06925 carbon starvation protein A	K06200 cstA; carbon starvation protein
D      CCO03_13945 translational GTPase TypA	K06207 typA; GTP-binding protein
D      CCO03_08980 hypothetical protein	K07168 K07168; CBS domain-containing membrane protein
D      CCO03_03285 phosphate starvation-inducible protein PhoH	K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D      CCO03_09125 phosphate starvation-inducible protein PhoH	K07175 phoH2; PhoH-like ATPase
D      CCO03_10460 PrkA family serine protein kinase	K07180 prkA; serine protein kinase
D      CCO03_18070 YajQ family cyclic di-GMP-binding protein	K09767 yajQ; cyclic-di-GMP-binding protein
C    99992 Structural proteins
D      CCO03_15510 outer membrane lipoprotein carrier protein LolA	K03634 lolA; outer membrane lipoprotein carrier protein
D      CCO03_16530 hypothetical protein	K02494 lolB; outer membrane lipoprotein LolB
D      CCO03_03625 ABC transporter	K04754 mlaA; phospholipid-binding lipoprotein MlaA
D      CCO03_13250 hypothetical protein	K06077 slyB; outer membrane lipoprotein SlyB
D      CCO03_14800 hypothetical protein	K06142 hlpA; outer membrane protein
D      CCO03_14100 peptidase	K06194 nlpD; lipoprotein NlpD
D      CCO03_02910 efflux transporter periplasmic adaptor subunit	K02005 ABC.CD.TX; HlyD family secretion protein
D      CCO03_13590 hypothetical protein	K15539 rodZ; cytoskeleton protein RodZ
C    99994 Others
D      CCO03_06105 phosphate transport system regulatory protein PhoU	K02039 phoU; phosphate transport system protein
D      CCO03_09565 ferredoxin	K02192 bfd; bacterioferritin-associated ferredoxin
D      CCO03_16215 hypothetical protein	K03926 cutA; periplasmic divalent cation tolerance protein
D      CCO03_02560 Co2+/Mg2+ efflux protein ApaG	K06195 apaG; ApaG protein
D      CCO03_17685 iron donor protein CyaY	K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D      CCO03_08170 hemerythrin	K07216 hr; hemerythrin
D      CCO03_10185 iron-regulated protein	K07231 K07231; putative iron-regulated protein
B
B  09194 Poorly characterized
C    99996 General function prediction only
D      CCO03_15120 hypothetical protein	K03558 cvpA; membrane protein required for colicin V production
D      CCO03_13835 hypothetical protein	K04065 osmY; hyperosmotically inducible periplasmic protein
D      CCO03_10165 tRNA-binding protein	K06878 K06878; tRNA-binding protein
D      CCO03_14180 preprotein translocase subunit TatC	K06886 glbN; hemoglobin
D      CCO03_11220 globin	K06886 glbN; hemoglobin
D      CCO03_13675 Patatin	K07001 K07001; NTE family protein
D      CCO03_05175 patatin	K07001 K07001; NTE family protein
D      CCO03_06185 hypothetical protein	K07001 K07001; NTE family protein
D      CCO03_02260 iron-sulfur cluster insertion protein ErpA	K15724 erpA; iron-sulfur cluster insertion protein
D      CCO03_02305 metal-dependent hydrolase	K07038 K07038; inner membrane protein
D      CCO03_18815 hypothetical protein	K07048 PTER; phosphotriesterase-related protein
D      CCO03_10860 hypothetical protein	K07058 K07058; membrane protein
D      CCO03_15230 hypothetical protein	K07058 K07058; membrane protein
D      CCO03_07550 hypothetical protein	K04750 phnB; PhnB protein
D      CCO03_14915 arsenical resistance protein ArsH	K11811 arsH; arsenical resistance protein ArsH
D      CCO03_04610 hypothetical protein	K03744 lemA; LemA protein
D      CCO03_02445 hypothetical protein	K03744 lemA; LemA protein
D      CCO03_14215 hypothetical protein	K03745 slyX; SlyX protein
D      CCO03_09370 hypothetical protein	K05805 creA; CreA protein
D      CCO03_15125 hypothetical protein	K03749 dedD; DedD protein
D      CCO03_05840 hypothetical protein	K03975 dedA; membrane-associated protein
D      CCO03_18780 hypothetical protein	K08972 K08972; putative membrane protein
D      CCO03_18940 hypothetical protein	K08983 K08983; putative membrane protein
D      CCO03_07180 hypothetical protein	K08987 K08987; putative membrane protein
D      CCO03_15965 hypothetical protein	K09858 K09858; SEC-C motif domain protein
D      CCO03_01110 hypothetical protein	K09914 K09914; putative lipoprotein
C    99997 Function unknown
D      CCO03_09810 hypothetical protein	K06867 K06867; uncharacterized protein
D      CCO03_03580 hypothetical protein	K06867 K06867; uncharacterized protein
D      CCO03_02225 hypothetical protein	K06872 K06872; uncharacterized protein
D      CCO03_02440 hypothetical protein	K06872 K06872; uncharacterized protein
D      CCO03_01745 hypothetical protein	K06889 K06889; uncharacterized protein
D      CCO03_15810 AAA family ATPase	K06923 K06923; uncharacterized protein
D      CCO03_00280 hypothetical protein	K06938 K06938; uncharacterized protein
D      CCO03_10930 hypothetical protein	K06938 K06938; uncharacterized protein
D      CCO03_02885 zinc/iron-chelating domain-containing protein	K06940 K06940; uncharacterized protein
D      CCO03_14960 zinc/iron-chelating domain-containing protein	K06940 K06940; uncharacterized protein
D      CCO03_16615 GTP-binding protein	K06945 K06945; uncharacterized protein
D      CCO03_15710 hypothetical protein	K06950 K06950; uncharacterized protein
D      CCO03_10840 NAD/FAD-binding protein	K06954 K06954; uncharacterized protein
D      CCO03_11940 GNAT family N-acetyltransferase	K06975 K06975; uncharacterized protein
D      CCO03_18670 hypothetical protein	K06975 K06975; uncharacterized protein
D      CCO03_03110 esterase	K07000 K07000; uncharacterized protein
D      CCO03_18850 hypothetical protein	K07004 K07004; uncharacterized protein
D      CCO03_18720 phosphohydrolase	K07006 K07006; uncharacterized protein
D      CCO03_00080 alpha/beta hydrolase	K07018 K07018; uncharacterized protein
D      CCO03_08215 glyoxalase	K07032 K07032; uncharacterized protein
D      CCO03_02610 zinc chelation protein SecC	K07039 K07039; uncharacterized protein
D      CCO03_07495 metalloprotease	K07054 K07054; uncharacterized protein
D      CCO03_13435 hypothetical protein	K07068 K07068; uncharacterized protein
D      CCO03_03880 hypothetical protein	K07068 K07068; uncharacterized protein
D      CCO03_09355 hypothetical protein	K07068 K07068; uncharacterized protein
D      CCO03_01350 hypothetical protein	K07068 K07068; uncharacterized protein
D      CCO03_10370 hypothetical protein	K07068 K07068; uncharacterized protein
D      CCO03_00180 hypothetical protein	K07090 K07090; uncharacterized protein
D      CCO03_02585 hypothetical protein	K07090 K07090; uncharacterized protein
D      CCO03_03125 hypothetical protein	K07090 K07090; uncharacterized protein
D      CCO03_01605 hypothetical protein	K07090 K07090; uncharacterized protein
D      CCO03_01610 hypothetical protein	K07090 K07090; uncharacterized protein
D      CCO03_08930 alkaline phosphatase	K07093 K07093; uncharacterized protein
D      CCO03_15320 metallophosphatase	K07098 K07098; uncharacterized protein
D      CCO03_09325 nicotinate phosphoribosyltransferase	K07101 K07101; uncharacterized protein
D      CCO03_19315 SET domain-containing protein-lysine N-methyltransferase	K07117 K07117; uncharacterized protein
D      CCO03_11420 histidine kinase	K07118 K07118; uncharacterized protein
D      CCO03_07870 SDR family oxidoreductase	K07124 K07124; uncharacterized protein
D      CCO03_08295 hypothetical protein	K07126 K07126; uncharacterized protein
D      CCO03_16620 hypothetical protein	K07131 K07131; uncharacterized protein
D      CCO03_17330 FAD-dependent oxidoreductase	K07137 K07137; uncharacterized protein
D      CCO03_07395 hypothetical protein	K07140 K07140; MOSC domain-containing protein
D      CCO03_19105 hypothetical protein	K07161 K07161; uncharacterized protein
D      CCO03_00195 membrane protein insertion efficiency factor YidD	K08998 K08998; uncharacterized protein
D      CCO03_12785 hypothetical protein	K09005 K09005; uncharacterized protein
D      CCO03_08135 glutamyl-tRNA amidotransferase	K09117 K09117; uncharacterized protein
D      CCO03_00655 DUF493 domain-containing protein	K09158 K09158; uncharacterized protein
D      CCO03_16970 hypothetical protein	K09161 K09161; uncharacterized protein
D      CCO03_10835 DUF1365 domain-containing protein	K09701 K09701; uncharacterized protein
D      CCO03_05695 hypothetical protein	K09780 K09780; uncharacterized protein
D      CCO03_10235 hypothetical protein	K09781 K09781; uncharacterized protein
D      CCO03_10455 hypothetical protein	K09786 K09786; uncharacterized protein
D      CCO03_03280 hypothetical protein	K09790 K09790; uncharacterized protein
D      CCO03_10780 tetraacyldisaccharide 4'-kinase	K09791 K09791; uncharacterized protein
D      CCO03_09620 hypothetical protein	K09794 K09794; uncharacterized protein
D      CCO03_09705 hypothetical protein	K09801 K09801; uncharacterized protein
D      CCO03_12100 peroxide stress protein YaaA	K09861 K09861; uncharacterized protein
D      CCO03_15800 DNA gyrase inhibitor YacG	K09862 K09862; uncharacterized protein
D      CCO03_06175 hypothetical protein	K09915 K09915; uncharacterized protein
D      CCO03_03550 hypothetical protein	K09919 K09919; uncharacterized protein
D      CCO03_17625 hypothetical protein	K09921 K09921; uncharacterized protein
D      CCO03_10160 hypothetical protein	K09922 K09922; uncharacterized protein
D      CCO03_04580 hypothetical protein	K09924 K09924; uncharacterized protein
D      CCO03_17205 hypothetical protein	K09924 K09924; uncharacterized protein
D      CCO03_11840 hypothetical protein	K09939 K09939; uncharacterized protein
D      CCO03_16145 peptidase	K09941 K09941; uncharacterized protein
D      CCO03_10200 hypothetical protein	K09947 K09947; uncharacterized protein
D      CCO03_05795 cytoplasmic protein	K09954 K09954; uncharacterized protein
D      CCO03_11930 hypothetical protein	K09962 K09962; uncharacterized protein
D      CCO03_08045 hypothetical protein	K09965 K09965; uncharacterized protein
D      CCO03_06570 aminomethyltransferase	K09967 K09967; uncharacterized protein
D      CCO03_05950 hypothetical protein	K09973 K09973; uncharacterized protein
D      CCO03_02865 hypothetical protein	K09980 K09980; uncharacterized protein
D      CCO03_06930 hypothetical protein	K09989 K09989; uncharacterized protein
D      CCO03_12370 phosphate transport regulator	K07220 K07220; uncharacterized protein
D      CCO03_10195 hypothetical protein	K07338 K07338; uncharacterized protein
!
#<hr>
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#Last updated: May 26, 2024