+D Messenger RNA Biogenesis KO
#
Prokaryotic Defense System - Cylindrospermum stagnale
%
!
ACRISPR-Cas system
B Universal Cas proteins
C Cylst_5273 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
C Cylst_5275 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D Cylst_5262 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D Cylst_5272 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Cylst_6176 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Cylst_5271 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-B factors
D Cylst_5272 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D Cylst_5272 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-D factors
D Cylst_5269 CRISPR-associated protein Csc1 K19120 csc1; CRISPR-associated protein Csc1
D Cylst_5268 CRISPR-associated protein Csc2 K19121 csc2; CRISPR-associated protein Csc2
D Cylst_5267 CRISPR-associated protein Csc3 K19122 csc3; CRISPR-associated protein Csc3
D Cylst_5272 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Cylst_6176 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Cylst_5271 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
D Cylst_6168 RAMP superfamily protein K19134 csx10; CRISPR-associated protein Csx10
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D Cylst_5272 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
D Cylst_6370 CRISPR-associated protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D Cylst_6369 hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2
D Cylst_4161 CRISPR-associated protein K19076 cmr2; CRISPR-associated protein Cmr2
D Cylst_4162 CRISPR-associated protein (Cas_Cmr3) K09127 cmr3; CRISPR-associated protein Cmr3
D Cylst_4163 CRISPR-associated protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Cylst_6367 CRISPR-associated protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Cylst_4165 hypothetical protein K19142 cmr6; CRISPR-associated protein Cmr6
C Subtype III-U factors
D Cylst_6173 CRISPR-associated protein, Csx3 family K19144 csx3; CRISPR-associated protein Csx3
D Cylst_6174 CRISPR-associated protein (Cas_csx3) K19144 csx3; CRISPR-associated protein Csx3
#
ARestriction and modification system (R-M system)
B Type I R-M system
C Cylst_5220 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Cylst_4787 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Cylst_5069 helicase, type I site-specific restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Cylst_5222 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Cylst_4791 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Cylst_5065 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Cylst_5223 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C Cylst_5067 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D Cylst_3541 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Cylst_2310 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Cylst_0504 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Cylst_4504 putative O-methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Cylst_1014 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Cylst_6325 site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Cylst_1715 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Cylst_3000 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Cylst_3068 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C Cylst_3532 restriction endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
C Cylst_2162 GTPase subunit of restriction endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
C Cylst_2784 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
C Cylst_2161 McrBC 5-methylcytosine restriction system component K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
C Cylst_4715 restriction endonuclease K07448 mrr; restriction system protein
#
AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D Cylst_1978 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Cylst_5848 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Cylst_3785 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Cylst_3380 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Cylst_3784 growth regulator K07172 mazE; antitoxin MazE
D Cylst_1979 putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain K26986 mazE6; antitoxin MazE6
D Cylst_5451 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C ChpB-ChpS
C YhaV-PrlF
D Cylst_4222 Toxin with endonuclease activity YhaV K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D Cylst_4223 hypothetical protein K19156 prlF; antitoxin PrlF
C RelE/StbE-RelB/StbD
D Cylst_0877 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Cylst_3209 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Cylst_3946 cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE
D Cylst_3729 cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE
D Cylst_2807 cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE
D Cylst_1228 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Cylst_6012 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
C YafQ-dinJ
D Cylst_5484 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
C YoeB-YefM
D Cylst_0048 toxin-antitoxin system, toxin component, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Cylst_0051 toxin-antitoxin system, toxin component, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Cylst_0050 prevent-host-death family protein K19159 yefM; antitoxin YefM
C HipA-HipB
C HicA-HicB
D Cylst_1713 hypothetical protein K18843 hicB; antitoxin HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
D Cylst_1410 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D Cylst_2076 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4
D Cylst_3464 putative addiction module antidote protein, CC2985 family K07746 parD1_3_4; antitoxin ParD1/3/4
D Cylst_4463 putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4
D Cylst_5141 putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4
D Cylst_5824 putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
D Cylst_6521 death-on-curing family protein K07341 doc; death on curing protein
D Cylst_4037 death-on-curing family protein K07341 doc; death on curing protein
C HigB-HigA
D Cylst_1690 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Cylst_1136 hypothetical protein K07334 higB-1; toxin HigB-1
D Cylst_3588 putative transcription regulator containing HTH domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Cylst_1691 putative transcription regulator containing HTH domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Cylst_5551 plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Cylst_1317 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
D Cylst_3478 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Cylst_4739 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Cylst_2787 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Cylst_1318 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Cylst_6717 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Cylst_4789 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Cylst_3711 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Cylst_1793 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Cylst_2786 virulence-associated protein K18829 mvpT; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D Cylst_5139 putative nucleic acid-binding protein, contains PIN domain K07062 fitB; toxin FitB [EC:3.1.-.-]
D Cylst_5140 hypothetical protein K21495 fitA; antitoxin FitA
D Cylst_5927 Ribbon-helix-helix protein, copG family K21495 fitA; antitoxin FitA
C BC_0920-BC_0921
C Type II TA system related factors
D Cylst_4257 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Cylst_4893 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Cylst_2195 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
#
ADNA phosphothiolation system
B Sulfur modification proteins
C Cylst_5405 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C Cylst_2848 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C Cylst_6123 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C Cylst_1352 DGQHR domain-containing protein K19169 dndB; DNA sulfur modification protein DndB
C Cylst_1354 putative sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC
C Cylst_1348 hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
C Cylst_1357 DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD
C Cylst_1358 DNA sulfur modification protein DndE K19172 dndE; DNA sulfur modification protein DndE
B DNA phosphorothioation-dependent restriction proteins
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023