+D GENES KO
#
KEGG Orthology (KO) - Clostridium cf. saccharolyticum K10
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cso00010]
D CLS_00300 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_19690 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_00200 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLS_15840 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLS_19910 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLS_01060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLS_13710 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLS_28920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLS_28890 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLS_28910 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLS_28970 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLS_28240 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLS_04310 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLS_30360 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLS_24140 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLS_16160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLS_27940 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CLS_36150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLS_03950 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CLS_12650 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLS_32020 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:cso00020]
D CLS_05980 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLS_05990 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLS_03950 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CLS_24140 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cso00030]
D CLS_00200 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLS_34320 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D CLS_27040 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLS_00280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLS_02380 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLS_10670 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLS_31380 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CLS_31370 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CLS_36150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLS_00750 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLS_26680 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLS_12180 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CLS_13710 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLS_15840 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLS_19910 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLS_01060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cso00040]
D CLS_12200 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D CLS_25730 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CLS_30530 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CLS_27040 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLS_30510 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D CLS_33540 Sugar (pentulose and hexulose) kinases K00854 xylB; xylulokinase [EC:2.7.1.17]
D CLS_19700 ABC-type sugar transport system, auxiliary component K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
C 00051 Fructose and mannose metabolism [PATH:cso00051]
D CLS_19710 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLS_15840 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLS_19910 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLS_01060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLS_13710 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLS_28920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLS_10670 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cso00052]
D CLS_27940 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CLS_19080 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CLS_36150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLS_00300 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_19690 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_27440 Beta-galactosidase/beta-glucuronidase K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D CLS_11530 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLS_32520 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D CLS_15840 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLS_19910 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLS_01060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:cso00053]
D CLS_25730 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CLS_25740 Nucleoside-diphosphate-sugar epimerases K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CLS_30530 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CLS_16020 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
C 00500 Starch and sucrose metabolism [PATH:cso00500]
D CLS_37120 Phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLS_37130 Phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLS_37140 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D CLS_12650 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLS_35580 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CLS_00830 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CLS_08370 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D CLS_10740 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CLS_02350 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CLS_21050 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CLS_11130 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CLS_10330 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CLS_10310 PTS system maltose-specific IIA component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIB component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIC component, Glc family (TC 4.A.1.1.11) K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLS_10320 Metal-dependent hydrolase K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D CLS_00560 PTS system, glucose-like IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLS_03020 alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CLS_00570 Glycosidases K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CLS_36150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLS_00300 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_19690 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_00200 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLS_19710 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cso00520]
D CLS_14550 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CLS_24510 PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2) K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLS_34170 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CLS_34190 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CLS_19710 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLS_24210 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLS_36590 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CLS_10440 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLS_15780 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLS_34200 Putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D CLS_34210 Dihydrodipicolinate synthase/N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D CLS_28810 Nucleoside-diphosphate-sugar epimerases K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D CLS_32020 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLS_00300 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_19690 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_36150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLS_25730 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CLS_19080 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CLS_11530 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLS_25740 Nucleoside-diphosphate-sugar epimerases K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CLS_00200 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLS_35580 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CLS_35590 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CLS_35600 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D CLS_00830 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cso00620]
D CLS_24140 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLS_27750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLS_27760 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLS_23730 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CLS_04310 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLS_01820 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLS_11810 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CLS_11850 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CLS_16160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLS_11100 Lactoylglutathione lyase and related lyases K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CLS_31270 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CLS_17060 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CLS_22690 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CLS_22680 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_13260 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_16240 glutaconyl-CoA decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_05980 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLS_05990 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLS_03950 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CLS_30360 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLS_11520 2-isopropylmalate synthase, yeast type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cso00630]
D CLS_02700 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLS_19810 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLS_17480 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLS_13720 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_18950 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_09070 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLS_11320 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:cso00640]
D CLS_27750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLS_27760 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLS_23730 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CLS_36820 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLS_01820 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLS_16160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLS_12110 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CLS_26100 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CLS_34500 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CLS_23760 Alcohol dehydrogenase, class IV K13921 pduQ; 1-propanol dehydrogenase
D CLS_23700 propionaldehyde dehydrogenase K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
D CLS_23750 NAD-dependent aldehyde dehydrogenases K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:cso00650]
D CLS_36810 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLS_36800 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CLS_36820 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLS_16270 glutaconyl-CoA decarboxylase alpha subunit K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D CLS_22680 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_13260 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_16240 glutaconyl-CoA decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_16230 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CLS_22670 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CLS_16210 Oxaloacetate decarboxylase, gamma chain. K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CLS_22660 Oxaloacetate decarboxylase, gamma chain. K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CLS_16260 glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D CLS_24140 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLS_00770 Threonine dehydrogenase and related Zn-dependent dehydrogenases K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D CLS_02720 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLS_14090 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLS_19560 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLS_12190 Threonine dehydrogenase and related Zn-dependent dehydrogenases K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D CLS_18240 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:cso00660]
D CLS_02720 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLS_14090 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLS_19560 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLS_19590 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CLS_19600 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CLS_14060 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D CLS_28920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cso00190]
D CLS_17610 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLS_17600 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLS_17580 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLS_17620 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLS_17540 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLS_17560 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLS_10220 Archaeal/vacuolar-type H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D CLS_10230 Archaeal/vacuolar-type H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D CLS_10200 Archaeal/vacuolar-type H+-ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D CLS_10240 H(+)-transporting ATP synthase, vacuolar type, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D CLS_10190 Archaeal/vacuolar-type H+-ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D CLS_10210 Archaeal/vacuolar-type H+-ATPase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D CLS_10160 Vacuolar (H+)-ATPase G subunit. K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D CLS_10170 Archaeal/vacuolar-type H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D CLS_10180 ATP synthase subunit C. K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D CLS_00310 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D CLS_08250 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cso00710]
D CLS_28910 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLS_28890 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLS_13710 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLS_00280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLS_10670 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLS_28920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLS_27040 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLS_02380 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLS_03950 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CLS_30360 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:cso00720]
D CLS_24140 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLS_30360 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLS_05980 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLS_05990 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLS_01820 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLS_36930 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CLS_33150 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CLS_36920 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLS_19120 5,10-methylenetetrahydrofolate reductase, prokaryotic form K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CLS_27760 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLS_23730 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CLS_27750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:cso00680]
D CLS_28240 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLS_13710 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLS_15840 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLS_19910 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLS_01060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLS_27750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLS_27760 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLS_28970 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLS_00480 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_14110 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_16040 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_14100 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CLS_33640 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:cso00910]
D CLS_14500 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLS_01860 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CLS_12990 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLS_13720 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_18950 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_18310 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:cso00920]
D CLS_08690 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CLS_16400 Sulfite reductase, beta subunit (hemoprotein) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D CLS_10780 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLS_00360 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLS_03460 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cso00061]
D CLS_01820 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLS_01770 acyl carrier protein K02078 acpP; acyl carrier protein
D CLS_24280 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein
D CLS_24570 acyl carrier protein K02078 acpP; acyl carrier protein
D CLS_25650 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein
D CLS_01790 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLS_01760 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLS_01810 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLS_09740 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_01800 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_36860 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_01830 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLS_01780 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLS_25700 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cso00071]
D CLS_36820 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLS_25700 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:cso00121]
D CLS_38520 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cso00561]
D CLS_11320 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLS_12830 dihydroxyacetone kinase DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D CLS_12840 dihydroxyacetone kinase DhaL subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D CLS_12850 dihydroxyacetone kinase DhaM subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D CLS_14960 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLS_37020 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLS_26630 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CLS_08210 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLS_38800 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CLS_32520 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:cso00564]
D CLS_26620 Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CLS_14970 Predicted dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLS_37050 Predicted dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLS_26630 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CLS_08210 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLS_24350 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CLS_26830 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLS_27320 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cso00600]
D CLS_32520 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cso00230]
D CLS_31370 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CLS_36150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLS_00750 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLS_26680 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLS_04010 Glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLS_19480 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CLS_19470 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLS_22950 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CLS_19460 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CLS_19450 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CLS_13870 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CLS_20760 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLS_17020 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLS_31860 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CLS_28020 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLS_25350 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLS_17210 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLS_03150 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CLS_13090 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CLS_26860 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLS_02270 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLS_30650 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLS_28460 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1]
D CLS_17040 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLS_08240 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CLS_13040 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLS_19250 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLS_39010 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CLS_20790 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLS_19790 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CLS_27960 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CLS_35060 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:cso00240]
D CLS_08740 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLS_18980 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLS_18970 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLS_28370 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLS_28380 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLS_11110 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CLS_00510 Predicted amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CLS_19390 dihydroorotate dehydrogenase (subfamily 1) family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CLS_19380 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CLS_19400 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CLS_19360 orotidine 5'-phosphate decarboxylase, subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CLS_24320 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CLS_14520 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CLS_18960 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CLS_23510 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CLS_28400 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CLS_31860 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CLS_27910 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLS_19870 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLS_14480 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLS_30650 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLS_34070 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLS_30680 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cso00250]
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLS_22550 aspartate--ammonia ligase, AsnA-type K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CLS_25520 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLS_18940 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLS_33260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLS_17010 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLS_20790 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLS_20760 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLS_28370 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLS_28380 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLS_18310 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLS_12990 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLS_13720 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_18950 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_08740 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLS_18980 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLS_18970 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLS_18100 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLS_24210 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLS_04010 Glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cso00260]
D CLS_37270 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLS_27950 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLS_37260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLS_33640 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D CLS_13690 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLS_11320 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLS_28970 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLS_00480 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_14110 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_16040 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_14100 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CLS_09070 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLS_04440 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLS_04450 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLS_30580 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLS_30590 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLS_24610 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLS_22460 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
C 00270 Cysteine and methionine metabolism [PATH:cso00270]
D CLS_10780 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLS_00360 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLS_09920 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_24430 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_35470 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_19140 B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLS_12050 S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLS_12070 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CLS_07390 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CLS_00180 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CLS_25350 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLS_24630 Cytosine deaminase and related metal-dependent hydrolases K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CLS_12680 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLS_37270 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLS_27950 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLS_37260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLS_03460 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLS_27330 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLS_28610 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLS_16160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLS_04440 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLS_04450 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLS_30580 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLS_30590 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLS_00480 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_14110 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_16040 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_14100 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cso00280]
D CLS_28610 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLS_36820 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cso00290]
D CLS_24610 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLS_19590 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CLS_19600 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CLS_14060 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CLS_02720 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLS_14090 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLS_19560 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLS_19570 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLS_28610 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLS_11520 2-isopropylmalate synthase, yeast type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cso00300]
D CLS_37260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLS_37270 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLS_27950 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLS_13480 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLS_20700 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLS_20710 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLS_38270 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLS_37170 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLS_03400 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLS_18990 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CLS_04330 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLS_20310 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D CLS_27150 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLS_27140 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D CLS_19230 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:cso00220]
D CLS_33260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLS_17010 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLS_18100 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLS_13720 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_18950 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_08740 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLS_18980 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLS_18970 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLS_12990 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:cso00330]
D CLS_12060 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CLS_12080 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D CLS_12070 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CLS_12050 S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLS_12100 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CLS_14210 Acetyltransferase (GNAT) family. K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CLS_04130 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CLS_26330 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CLS_26300 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CLS_03180 Pyruvate-formate lyase K23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172]
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLS_19230 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:cso00340]
D CLS_19500 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CLS_13180 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CLS_13150 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CLS_13140 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CLS_36910 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00360 Phenylalanine metabolism [PATH:cso00360]
D CLS_14140 uncharacterized domain 1 K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D CLS_36810 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLS_19230 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CLS_02690 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cso00400]
D CLS_04360 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLS_28940 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLS_26050 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CLS_09750 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D CLS_00330 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CLS_38670 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CLS_34330 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CLS_08220 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CLS_37250 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CLS_38680 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D CLS_36820 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cso00430]
D CLS_27760 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLS_23730 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CLS_27750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:cso00440]
D CLS_31070 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D CLS_31060 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:cso00450]
D CLS_09920 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_24430 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_35470 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_19140 B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLS_08890 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLS_36880 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLS_27700 selenium donor protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLS_08960 seryl-tRNA(sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLS_02110 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D CLS_22550 aspartate--ammonia ligase, AsnA-type K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:cso00470]
D CLS_19230 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CLS_35830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLS_18100 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLS_35840 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLS_38100 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLS_22460 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CLS_03400 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLS_04330 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cso00480]
D CLS_35300 Uncharacterized proteins, homologs of lactam utilization protein B K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CLS_12070 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cso00511]
D CLS_27440 Beta-galactosidase/beta-glucuronidase K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:cso00540]
D CLS_02710 CMP-2-keto-3-deoxyoctulosonic acid synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CLS_35550 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CLS_35520 Predicted kinase related to galactokinase and mevalonate kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cso00541]
D CLS_11530 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLS_25730 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CLS_25740 Nucleoside-diphosphate-sugar epimerases K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CLS_36560 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLS_36570 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLS_11640 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLS_36580 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLS_35580 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CLS_35590 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CLS_35600 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D CLS_28760 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
C 00550 Peptidoglycan biosynthesis [PATH:cso00550]
D CLS_10440 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLS_15780 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLS_00720 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLS_38100 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLS_27150 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLS_35830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLS_27140 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLS_24340 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLS_36380 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLS_38090 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLS_00130 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLS_20640 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLS_38070 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLS_20130 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D CLS_13310 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_04670 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_01550 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_26090 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_20340 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_17820 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_04650 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:cso00552]
D CLS_36380 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLS_25670 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D CLS_02770 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLS_02790 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLS_31740 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLS_11540 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D CLS_35610 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cso00543]
D CLS_04380 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CLS_10780 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cso00730]
D CLS_10100 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CLS_07230 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CLS_15060 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLS_36020 iron-only hydrogenase maturation protein HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CLS_18490 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLS_07240 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CLS_18500 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CLS_27050 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLS_27030 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CLS_35060 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLS_07220 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cso00740]
D CLS_08710 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CLS_11790 Nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D CLS_18490 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:cso00750]
D CLS_27010 Pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CLS_33420 Pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CLS_14100 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CLS_13690 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cso00760]
D CLS_28020 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLS_31860 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CLS_25850 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CLS_19550 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CLS_17360 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CLS_28930 Amidases related to nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CLS_10020 NAD-dependent protein deacetylases, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CLS_38530 NAD-dependent protein deacetylases, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CLS_13380 Predicted sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cso00770]
D CLS_02720 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLS_14090 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLS_19560 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLS_19570 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLS_18340 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLS_24520 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CLS_32480 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CLS_25380 pantetheine-phosphate adenylyltransferase, bacterial K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CLS_27830 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CLS_20880 phosphopantethiene--protein transferase domain K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CLS_28610 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:cso00780]
D CLS_01810 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLS_09740 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_01800 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_36860 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_01830 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLS_08480 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CLS_08490 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CLS_08500 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLS_36010 iron-only hydrogenase maturation protein HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLS_17420 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
D CLS_09070 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
C 00790 Folate biosynthesis [PATH:cso00790]
D CLS_18190 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CLS_20470 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CLS_11940 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 00670 One carbon pool by folate [PATH:cso00670]
D CLS_18190 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CLS_36930 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CLS_33150 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CLS_36920 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLS_19470 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLS_36910 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D CLS_27110 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLS_19140 B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLS_19120 5,10-methylenetetrahydrofolate reductase, prokaryotic form K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CLS_26310 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cso00860]
D CLS_37920 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLS_24100 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CLS_11220 Uroporphyrinogen-III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CLS_24110 uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CLS_16520 Cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CLS_23870 precorrin-2 C20-methyltransferase/cobalt-factor II C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CLS_23900 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CLS_23880 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CLS_23890 Cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CLS_23920 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CLS_24020 Precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CLS_23930 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)/cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CLS_20680 ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CLS_37940 ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CLS_24010 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CLS_23980 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CLS_23950 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CLS_23960 Cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CLS_24000 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cso00900]
D CLS_24370 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CLS_12390 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CLS_35710 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CLS_16820 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CLS_24390 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CLS_13350 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLS_24340 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:cso00903]
D CLS_33060 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CLS_00280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cso00523]
D CLS_36560 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLS_36570 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLS_11640 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLS_36580 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D CLS_36570 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cso00332]
D CLS_26330 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CLS_26300 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cso00261]
D CLS_37270 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLS_27950 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLS_13480 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLS_20700 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLS_20710 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cso00521]
D CLS_00300 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_19690 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_36150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLS_36560 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLS_36570 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLS_11640 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLS_36580 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CLS_00300 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLS_19690 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cso00525]
D CLS_36560 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLS_36570 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cso00401]
D CLS_38680 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D CLS_01790 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLS_09740 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_01800 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_36860 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CLS_01770 acyl carrier protein K02078 acpP; acyl carrier protein
D CLS_24280 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein
D CLS_24570 acyl carrier protein K02078 acpP; acyl carrier protein
D CLS_25650 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cso00362]
D CLS_02690 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CLS_17740 Tautomerase enzyme. K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CLS_16270 glutaconyl-CoA decarboxylase alpha subunit K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D CLS_22680 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_13260 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_16240 glutaconyl-CoA decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_16230 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CLS_22670 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CLS_16210 Oxaloacetate decarboxylase, gamma chain. K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CLS_22660 Oxaloacetate decarboxylase, gamma chain. K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CLS_36810 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00627 Aminobenzoate degradation
D CLS_11810 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CLS_11850 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:cso00622]
D CLS_17740 Tautomerase enzyme. K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CLS_02690 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D CLS_16260 glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D CLS_33060 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:cso00621]
D CLS_17740 Tautomerase enzyme. K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CLS_02690 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cso03020]
D CLS_36090 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLS_36100 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLS_26850 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CLS_22850 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cso03010]
D CLS_13030 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLS_16410 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D CLS_34880 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D CLS_35160 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D CLS_35010 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D CLS_10050 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D CLS_34980 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLS_35350 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D CLS_34810 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D CLS_35150 Ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLS_12470 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D CLS_35140 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLS_34960 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLS_37810 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D CLS_25260 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D CLS_10070 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D CLS_34860 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CLS_26460 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CLS_36310 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D CLS_34850 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D CLS_34820 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3
D CLS_34830 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D CLS_34990 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D CLS_36340 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLS_10120 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D CLS_36330 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D CLS_36300 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D CLS_35340 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D CLS_34930 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D CLS_35030 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D CLS_34890 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D CLS_35180 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D CLS_35000 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D CLS_25310 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D CLS_28540 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D CLS_25800 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D CLS_34870 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D CLS_34840 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLS_32690 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D CLS_25820 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D CLS_35020 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D CLS_27720 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLS_05870 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D CLS_28550 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D CLS_R_39840 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLS_R_39830 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cso00970]
D CLS_T_39640 CLS_T_39640 K14218 tRNA-Ala; tRNA Ala
D CLS_T_39650 CLS_T_39650 K14218 tRNA-Ala; tRNA Ala
D CLS_T_39820 CLS_T_39820 K14219 tRNA-Arg; tRNA Arg
D CLS_T_39720 CLS_T_39720 K14219 tRNA-Arg; tRNA Arg
D CLS_T_39810 CLS_T_39810 K14219 tRNA-Arg; tRNA Arg
D CLS_T_39490 CLS_T_39490 K14219 tRNA-Arg; tRNA Arg
D CLS_T_39560 CLS_T_39560 K14220 tRNA-Asn; tRNA Asn
D CLS_T_39400 CLS_T_39400 K14221 tRNA-Asp; tRNA Asp
D CLS_T_39580 CLS_T_39580 K14222 tRNA-Cys; tRNA Cys
D CLS_T_39510 CLS_T_39510 K14223 tRNA-Gln; tRNA Gln
D CLS_T_39620 CLS_T_39620 K14223 tRNA-Gln; tRNA Gln
D CLS_T_39800 CLS_T_39800 K14223 tRNA-Gln; tRNA Gln
D CLS_T_39570 CLS_T_39570 K14224 tRNA-Glu; tRNA Glu
D CLS_T_39670 CLS_T_39670 K14224 tRNA-Glu; tRNA Glu
D CLS_T_39380 CLS_T_39380 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39480 CLS_T_39480 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39390 CLS_T_39390 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39710 CLS_T_39710 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39530 CLS_T_39530 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39500 CLS_T_39500 K14226 tRNA-His; tRNA His
D CLS_T_39760 CLS_T_39760 K14228 tRNA-Leu; tRNA Leu
D CLS_T_39730 CLS_T_39730 K14228 tRNA-Leu; tRNA Leu
D CLS_T_39460 CLS_T_39460 K14229 tRNA-Lys; tRNA Lys
D CLS_T_39520 CLS_T_39520 K14229 tRNA-Lys; tRNA Lys
D CLS_T_39350 CLS_T_39350 K14229 tRNA-Lys; tRNA Lys
D CLS_T_39360 CLS_T_39360 K14229 tRNA-Lys; tRNA Lys
D CLS_T_39780 CLS_T_39780 K14230 tRNA-Met; tRNA Met
D CLS_T_39790 CLS_T_39790 K14230 tRNA-Met; tRNA Met
D CLS_T_39440 CLS_T_39440 K14230 tRNA-Met; tRNA Met
D CLS_T_39370 CLS_T_39370 K14231 tRNA-Phe; tRNA Phe
D CLS_T_39450 CLS_T_39450 K14231 tRNA-Phe; tRNA Phe
D CLS_T_39740 CLS_T_39740 K14232 tRNA-Pro; tRNA Pro
D CLS_T_39470 CLS_T_39470 K14232 tRNA-Pro; tRNA Pro
D CLS_T_39700 CLS_T_39700 K14232 tRNA-Pro; tRNA Pro
D CLS_T_39660 CLS_T_39660 K14232 tRNA-Pro; tRNA Pro
D CLS_T_39590 CLS_T_39590 K14233 tRNA-Ser; tRNA Ser
D CLS_T_39600 CLS_T_39600 K14233 tRNA-Ser; tRNA Ser
D CLS_T_39540 CLS_T_39540 K14233 tRNA-Ser; tRNA Ser
D CLS_T_39610 CLS_T_39610 K14233 tRNA-Ser; tRNA Ser
D CLS_T_39680 CLS_T_39680 K14234 tRNA-Thr; tRNA Thr
D CLS_T_39690 CLS_T_39690 K14234 tRNA-Thr; tRNA Thr
D CLS_T_39420 CLS_T_39420 K14234 tRNA-Thr; tRNA Thr
D CLS_T_39630 CLS_T_39630 K14235 tRNA-Trp; tRNA Trp
D CLS_T_39340 CLS_T_39340 K14236 tRNA-Tyr; tRNA Tyr
D CLS_T_39430 CLS_T_39430 K14236 tRNA-Tyr; tRNA Tyr
D CLS_T_39410 CLS_T_39410 K14237 tRNA-Val; tRNA Val
D CLS_T_39770 CLS_T_39770 K14237 tRNA-Val; tRNA Val
D CLS_T_39750 CLS_T_39750 K14237 tRNA-Val; tRNA Val
D CLS_T_39550 CLS_T_39550 K14238 tRNA-Sec; tRNA Sec
D CLS_37920 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLS_16180 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CLS_24040 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLS_17090 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLS_00810 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLS_30310 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLS_28600 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLS_27000 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLS_08960 seryl-tRNA(sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLS_16830 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLS_02110 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLS_27110 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLS_20370 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLS_38740 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLS_21040 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLS_12010 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLS_17080 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLS_28700 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLS_28690 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLS_12800 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cso03060]
D CLS_35040 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CLS_36280 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D CLS_28670 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLS_14030 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CLS_14050 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CLS_37230 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLS_25250 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLS_24600 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLS_10720 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLS_13960 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLS_33740 Signal peptidase I . Serine peptidase. MEROPS family S26B K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cso04122]
D CLS_15060 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLS_15080 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLS_27620 Rhodanese-related sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D CLS_11940 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cso03018]
D CLS_28240 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLS_37830 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLS_10560 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLS_12120 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLS_15840 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLS_37740 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLS_16340 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLS_08250 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cso03030]
D CLS_34100 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLS_15830 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLS_24410 DNA polymerase III, alpha chain, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLS_01070 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLS_02290 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLS_05930 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLS_10130 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLS_28450 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLS_10060 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLS_25330 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLS_27840 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLS_03430 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_06640 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cso03410]
D CLS_11040 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLS_03210 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLS_36370 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CLS_17430 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CLS_34700 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLS_08320 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLS_27840 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLS_33270 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLS_03430 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_06640 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cso03420]
D CLS_14240 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLS_06090 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLS_15580 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CLS_15760 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CLS_30820 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLS_27840 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLS_03430 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_06640 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_22850 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:cso03430]
D CLS_10630 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLS_30820 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLS_13340 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLS_33270 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLS_10060 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLS_15830 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLS_24410 DNA polymerase III, alpha chain, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLS_05930 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLS_01070 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLS_02290 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLS_34100 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLS_03430 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_06640 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cso03440]
D CLS_33270 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLS_10060 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLS_05950 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLS_01090 recombination protein RecR K06187 recR; recombination protein RecR
D CLS_04100 protein RecA K03553 recA; recombination protein RecA
D CLS_27840 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLS_20080 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLS_20090 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLS_26700 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLS_18750 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLS_36210 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLS_15830 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLS_24410 DNA polymerase III, alpha chain, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLS_05930 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLS_01070 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLS_02290 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLS_34100 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLS_27130 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cso02010]
D CLS_11910 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLS_11900 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLS_11890 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLS_11500 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D CLS_16360 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D CLS_11490 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein
D CLS_16370 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein
D CLS_11480 ABC-type spermidine/putrescine transport systems, ATPase components K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLS_16380 ABC-type spermidine/putrescine transport systems, ATPase components K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLS_34280 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLS_34290 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D CLS_34300 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLS_32830 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLS_32840 glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLS_15410 ABC-type sugar transport systems, ATPase components K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLS_27410 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLS_27450 ABC-type sugar transport system, periplasmic component K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D CLS_27460 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10189 lacF; lactose/L-arabinose transport system permease protein
D CLS_27980 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CLS_28000 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D CLS_27990 Uncharacterized ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein
D CLS_28010 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CLS_19680 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D CLS_21020 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D CLS_19670 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10440 rbsC; ribose transport system permease protein
D CLS_19740 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLS_19660 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLS_30440 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CLS_30470 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D CLS_30460 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CLS_33240 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CLS_33210 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10541 mglC; methyl-galactoside transport system permease protein
D CLS_33230 ABC-type sugar transport system, ATPase component K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D CLS_11350 ABC-type sugar transport system, periplasmic component K17213 K17213; inositol transport system substrate-binding protein
D CLS_11340 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K17214 K17214; inositol transport system permease protein
D CLS_11330 ABC-type sugar transport system, ATPase component K17215 K17215; inositol transport system ATP-binding protein
D CLS_00620 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CLS_34510 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CLS_00610 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CLS_34530 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CLS_34540 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CLS_19920 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D CLS_19930 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D CLS_19960 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLS_35440 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLS_35450 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLS_09110 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CLS_31290 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CLS_31300 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D CLS_09120 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K17077 artQ; arginine/lysine/histidine transport system permease protein
D CLS_31310 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CLS_26610 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLS_26590 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CLS_26580 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D CLS_26570 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLS_26560 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLS_24250 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D CLS_24240 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CLS_24230 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CLS_16480 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLS_16490 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLS_16440 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein
D CLS_16450 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D CLS_14660 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CLS_16460 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CLS_14670 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CLS_16470 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CLS_03780 ABC-type dipeptide transport system, periplasmic component K13889 gsiB; glutathione transport system substrate-binding protein
D CLS_03790 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K13890 gsiC; glutathione transport system permease protein
D CLS_03800 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K13891 gsiD; glutathione transport system permease protein
D CLS_17510 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CLS_17530 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CLS_17520 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLS_18050 ABC-type cobalt transport system, periplasmic component K02009 cbiN; cobalt/nickel transport protein
D CLS_18060 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLS_18040 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLS_18030 cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLS_08510 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CLS_35870 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CLS_35240 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CLS_06350 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CLS_11650 ABC-type polysaccharide/polyol phosphate export systems, permease component K09692 tagG; teichoic acid transport system permease protein
D CLS_36450 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CLS_29440 hypothetical protein K19310 bcrB; bacitracin transport system permease protein
D CLS_29420 ABC-type multidrug transport system, ATPase component K19309 bcrA; bacitracin transport system ATP-binding protein
D CLS_15450 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CLS_15440 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLS_04590 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLS_06380 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLS_04580 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLS_06390 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLS_20240 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_02950 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_02960 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_28290 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_20250 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_11410 ATPase components of ABC transporters with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cso02060]
D CLS_03320 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLS_17630 PTS HPr component phosphorylation site. K02784 ptsH; phosphocarrier protein HPr
D CLS_03310 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CLS_19150 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CLS_24500 Phosphotransferase system, HPr-related proteins K02784 ptsH; phosphocarrier protein HPr
D CLS_22830 PTS HPr component phosphorylation site. K02784 ptsH; phosphocarrier protein HPr
D CLS_32020 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLS_24510 PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2) K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLS_10310 PTS system maltose-specific IIA component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIB component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIC component, Glc family (TC 4.A.1.1.11) K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLS_12640 PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6) K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLS_00560 PTS system, glucose-like IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLS_37120 Phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLS_37130 Phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLS_37140 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
C 03070 Bacterial secretion system [PATH:cso03070]
D CLS_14030 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CLS_36280 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D CLS_28670 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLS_35040 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CLS_14050 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CLS_37230 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLS_24600 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLS_25250 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLS_25080 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CLS_29370 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cso02020]
D CLS_27270 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLS_27280 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLS_19920 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D CLS_35390 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CLS_39270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D CLS_05920 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLS_06910 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLS_39260 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLS_07200 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLS_04690 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLS_08270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLS_04660 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D CLS_04650 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CLS_04640 alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D CLS_08360 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLS_27190 [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D CLS_26920 citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D CLS_26910 Citrate lyase beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CLS_26900 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D CLS_26930 holo-ACP synthase CitX K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52]
D CLS_28870 Response regulator of citrate/malate metabolism K11615 malR; two-component system, CitB family, response regulator MalR
D CLS_36610 Na+/citrate symporter K11616 maeN; malate:Na+ symporter
D CLS_13720 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_18950 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_35290 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 atoC; two-component system, NtrC family, response regulator AtoC
D CLS_02090 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CLS_12940 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLS_12950 FOG: CheY-like receiver K07719 glnL; two-component system, response regulator GlnL
D CLS_18100 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLS_21010 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CLS_30420 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CLS_19720 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CLS_20610 AraC-type DNA-binding domain-containing proteins K07720 yesN; two-component system, response regulator YesN
D CLS_21000 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D CLS_23780 AraC-type DNA-binding domain-containing proteins K07720 yesN; two-component system, response regulator YesN
D CLS_08140 Protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cso02024]
D CLS_12680 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLS_04360 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLS_04430 ABC-type Fe3+ transport system, periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLS_27600 ABC-type uncharacterized transport system, periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLS_04410 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLS_27580 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLS_04420 ABC-type uncharacterized transport system, permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLS_27590 ABC-type spermidine/putrescine transport system, permease component I K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLS_04400 ABC-type spermidine/putrescine transport systems, ATPase components K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLS_27570 ABC-type spermidine/putrescine transport systems, ATPase components K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLS_26610 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLS_26590 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CLS_26580 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D CLS_26570 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLS_26560 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLS_25700 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLS_33120 Uncharacterized protein conserved in bacteria K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLS_06910 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLS_16480 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLS_16490 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLS_16440 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein
D CLS_16450 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D CLS_14660 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CLS_16460 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CLS_14670 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CLS_16470 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CLS_14620 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLS_09850 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLS_38480 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLS_11280 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLS_11230 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLS_09860 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLS_38490 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLS_14650 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLS_11240 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLS_09870 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLS_03810 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_11730 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_09880 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_38510 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_11250 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_09890 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLS_03820 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLS_11260 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLS_14030 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CLS_36280 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D CLS_28670 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLS_35040 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CLS_14050 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CLS_37230 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLS_24600 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLS_25250 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLS_08360 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cso02030]
D CLS_19680 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D CLS_21020 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D CLS_33240 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
C 02040 Flagellar assembly
D CLS_15250 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D CLS_22890 Sigma-70 region 3. K03086 rpoD; RNA polymerase primary sigma factor
D CLS_28440 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CLS_30930 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CLS_28240 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CLS_19140 B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cso01501]
D CLS_14550 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CLS_16480 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLS_16490 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLS_16440 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein
D CLS_16450 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D CLS_14660 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CLS_16460 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CLS_14670 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CLS_16470 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CLS_31020 Beta-lactamase class D K02172 blaR1; bla regulator protein blaR1
D CLS_36050 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D CLS_20640 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:cso01502]
D CLS_39260 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLS_07200 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLS_04690 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLS_08270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLS_35830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLS_27140 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLS_38090 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLS_00130 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLS_04650 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CLS_04660 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D CLS_04640 alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cso01503]
D CLS_03410 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLS_15090 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLS_35390 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cso01000]
C 01001 Protein kinases [BR:cso01001]
D CLS_27060 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CLS_31780 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLS_27270 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLS_06910 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLS_39260 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLS_23770 Predicted sensor domain K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLS_12940 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLS_21010 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CLS_30420 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CLS_32090 Signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cso01009]
D CLS_15840 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLS_14610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CLS_27070 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cso01002]
D CLS_13960 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLS_02510 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLS_02400 Type IV leader peptidase family. K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CLS_29110 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D CLS_16880 pyroglutamyl-peptidase I . Cysteine peptidase. MEROPS family C15 K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D CLS_03710 Predicted glutamine amidotransferases K07010 K07010; putative glutamine amidotransferase
D CLS_03760 Predicted glutamine amidotransferases K07010 K07010; putative glutamine amidotransferase
D CLS_33830 Predicted glutamine amidotransferases K07010 K07010; putative glutamine amidotransferase
D CLS_36890 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLS_24870 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLS_03080 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLS_04010 Glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLS_24210 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLS_25520 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLS_18940 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLS_39030 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CLS_05370 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D CLS_06230 sortase B. Cysteine peptidase. MEROPS family C60B K08600 srtB; sortase B [EC:3.4.22.71]
D CLS_07460 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D CLS_23490 Predicted metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CLS_14600 Zinc carboxypeptidase. K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D CLS_04650 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CLS_02220 D-alanyl-D-alanine carboxypeptidase. K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CLS_19780 Predicted Zn-dependent peptidases, insulinase-like K06972 PITRM1; presequence protease [EC:3.4.24.-]
D CLS_30270 Predicted Zn-dependent peptidases, insulinase-like K06972 PITRM1; presequence protease [EC:3.4.24.-]
D CLS_27300 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLS_38270 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLS_37170 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLS_25500 peptidase T. Metallo peptidase. MEROPS family M20B K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CLS_24670 amidohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D CLS_11290 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D CLS_31320 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D CLS_17240 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D CLS_25410 Membrane proteins related to metalloendopeptidases K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CLS_33630 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLS_35080 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLS_22560 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLS_19440 Leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CLS_20220 Zn-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D CLS_16890 isoaspartyl dipeptidase IadA K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D CLS_06060 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLS_15710 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLS_35500 Cellulase M and related proteins K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CLS_03830 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D CLS_31020 Beta-lactamase class D K02172 blaR1; bla regulator protein blaR1
D CLS_36050 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D CLS_33750 Camelysin metallo-endopeptidase. K06336 tasA; spore coat-associated protein N
D CLS_03740 L-aminopeptidase/D-esterase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D CLS_35390 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CLS_28480 Subtilisin-like serine proteases K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D CLS_04050 Subtilisin-like serine proteases K17734 aprX; serine protease AprX [EC:3.4.21.-]
D CLS_13310 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_04670 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_01550 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_26090 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_20340 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_17820 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_39050 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLS_25880 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLS_10720 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLS_33740 Signal peptidase I . Serine peptidase. MEROPS family S26B K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D CLS_15470 C-terminal peptidase (prc) K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CLS_32700 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CLS_26690 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLS_20110 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CLS_30250 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cso01003]
D CLS_08370 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D CLS_20640 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cso01005]
D CLS_02710 CMP-2-keto-3-deoxyoctulosonic acid synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CLS_35550 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CLS_35620 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLS_12730 Glycosyl transferase family 2. K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLS_02740 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLS_00400 Glycosyltransferases involved in cell wall biogenesis K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cso01011]
D CLS_10440 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLS_15780 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLS_00720 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLS_38100 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLS_27150 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLS_35830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLS_35840 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLS_26690 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLS_38090 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLS_00130 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLS_36380 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLS_20640 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLS_38070 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLS_20130 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D CLS_13310 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_04670 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_01550 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_26090 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_20340 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_17820 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLS_04650 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CLS_36890 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLS_24870 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLS_03080 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLS_25410 Membrane proteins related to metalloendopeptidases K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CLS_02220 D-alanyl-D-alanine carboxypeptidase. K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CLS_05370 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D CLS_06230 sortase B. Cysteine peptidase. MEROPS family C60B K08600 srtB; sortase B [EC:3.4.22.71]
D CLS_21070 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CLS_03410 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLS_15090 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cso01004]
D CLS_01790 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLS_01760 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLS_01810 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLS_09740 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_01800 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_36860 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLS_01830 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLS_01780 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLS_25700 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLS_26630 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CLS_08210 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cso01006]
D CLS_13350 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLS_24340 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLS_26230 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:cso01007]
D CLS_37920 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLS_16180 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CLS_12800 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLS_16830 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLS_02110 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLS_21040 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLS_20370 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLS_38740 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLS_17090 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLS_00810 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLS_17080 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLS_30310 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLS_27000 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLS_12010 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLS_28600 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLS_24040 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLS_28700 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLS_28690 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLS_03340 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLS_18990 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CLS_12140 Aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLS_09720 Aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLS_34150 Aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLS_09920 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_24430 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_35470 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLS_08480 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CLS_19230 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CLS_28610 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLS_31060 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CLS_14100 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cso00194]
D CLS_17620 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLS_17610 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLS_17600 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLS_17580 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLS_17560 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLS_17540 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cso03000]
D CLS_37650 Transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D CLS_19580 transcriptional regulator, LysR family K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D CLS_16390 Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CLS_13530 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLS_27430 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLS_02980 transcriptional regulator, GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CLS_00550 trehalose operon repressor, B. subtilis-type K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CLS_33590 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D CLS_17300 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CLS_24760 Transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D CLS_34380 Transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D CLS_17770 Predicted transcriptional regulators K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CLS_11300 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D CLS_10150 Predicted transcriptional regulators K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D CLS_18440 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLS_12900 Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CLS_36710 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CLS_00380 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLS_23820 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLS_06400 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CLS_18400 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CLS_04550 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CLS_17420 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CLS_15420 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator
D CLS_24200 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CLS_07730 Predicted transcriptional regulators K07726 K07726; putative transcriptional regulator
D CLS_24800 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D CLS_22290 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D CLS_17890 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D CLS_30910 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D CLS_24480 transcriptional antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator
D CLS_32010 transcriptional antiterminator, BglG family K03480 glcT; transcriptional antiterminator
D CLS_37090 Transcriptional antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D CLS_08800 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLS_28130 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLS_00870 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CLS_05650 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLS_05720 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLS_37000 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) K02443 glpP; glycerol uptake operon antiterminator
D CLS_13390 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D CLS_37710 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CLS_07220 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CLS_38040 mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cso03021]
D CLS_22850 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CLS_36090 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLS_36100 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLS_26850 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLS_15250 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D CLS_22890 Sigma-70 region 3. K03086 rpoD; RNA polymerase primary sigma factor
D CLS_28440 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CLS_30930 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D CLS_15360 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLS_00120 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLS_29490 Sigma-70, region 4. K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLS_08750 RNA polymerase, sigma subunit, SigV K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLS_29480 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLS_38200 RNA polymerase, sigma 29 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLS_38210 RNA polymerase, sigma subunit, RpsG/SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLS_20520 RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-B/F/G subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLS_21350 DNA-directed RNA polymerase specialized sigma subunit K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLS_08630 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CLS_13320 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CLS_24290 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D CLS_36290 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D CLS_36600 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLS_15870 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLS_12120 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cso03019]
D CLS_24580 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLS_10660 uncharacterized domain HDIG K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CLS_10560 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLS_28240 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLS_37830 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLS_12120 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLS_15840 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLS_37740 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLS_16340 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLS_08250 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CLS_15790 Predicted P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cso03011]
D CLS_13030 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLS_16410 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D CLS_34880 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D CLS_35160 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D CLS_35010 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D CLS_10050 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D CLS_34980 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLS_35350 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D CLS_34810 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D CLS_35150 Ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLS_12470 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D CLS_35140 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLS_34960 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLS_37810 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D CLS_25260 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D CLS_10070 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D CLS_34860 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CLS_26460 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CLS_36310 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D CLS_34850 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D CLS_34820 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3
D CLS_34830 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D CLS_34990 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D CLS_10120 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D CLS_36330 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D CLS_36300 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D CLS_36340 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLS_35340 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D CLS_34930 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D CLS_35030 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D CLS_34890 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D CLS_35180 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D CLS_35000 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D CLS_25310 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D CLS_28540 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D CLS_25800 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D CLS_34870 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D CLS_34840 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLS_25820 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D CLS_35020 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D CLS_27720 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLS_05870 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D CLS_28550 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D CLS_32690 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D CLS_R_39840 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLS_R_39830 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cso03009]
D CLS_24580 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLS_30280 GTP-binding protein Era K03595 era; GTPase
D CLS_25830 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D CLS_08630 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CLS_13320 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CLS_24290 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D CLS_36290 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D CLS_02160 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CLS_27090 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CLS_25370 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CLS_29200 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CLS_05760 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLS_38050 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CLS_32760 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CLS_02320 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CLS_13370 hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CLS_01440 Methylase involved in ubiquinone/menaquinone biosynthesis K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CLS_16860 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CLS_13890 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CLS_34770 Predicted SAM-dependent methyltransferases K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CLS_27080 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CLS_29980 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CLS_14470 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CLS_34360 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CLS_25480 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CLS_11800 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLS_16720 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLS_14250 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CLS_12320 [SSU ribosomal protein S18P]-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CLS_26840 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CLS_29190 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CLS_30200 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CLS_16840 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CLS_10560 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLS_27050 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLS_26640 ribosome-associated GTPase EngA K03977 engA; GTPase
D CLS_25320 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D CLS_30700 GTP-binding protein HflX K03665 hflX; GTPase
D CLS_34060 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLS_17040 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLS_08680 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CLS_08620 Uncharacterized protein conserved in bacteria K09748 rimP; ribosome maturation factor RimP
D CLS_05940 Uncharacterized conserved protein K14761 rlbA; ribosome-associated protein
D CLS_25870 iojap-related protein K09710 ybeB; ribosome-associated protein
D CLS_26410 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D CLS_25840 conserved hypothetical protein TIGR00253 K07574 yhbY; RNA-binding protein
D CLS_37210 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D CLS_27730 Predicted metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cso03016]
D CLS_12370 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLS_14150 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLS_12020 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CLS_28730 Uncharacterized conserved protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D CLS_37920 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLS_12010 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLS_21040 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLS_38740 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLS_02110 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLS_16180 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CLS_17090 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLS_24040 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLS_00810 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLS_30310 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLS_28600 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLS_27000 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLS_16830 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLS_20370 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLS_17080 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLS_28700 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLS_28690 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLS_12800 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLS_13050 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CLS_00110 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLS_01620 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CLS_35250 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLS_08700 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CLS_15060 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLS_34060 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLS_26230 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CLS_05820 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CLS_05770 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLS_27700 selenium donor protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLS_05860 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CLS_14340 Uncharacterized conserved protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CLS_01050 Cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CLS_15860 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CLS_26290 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CLS_30160 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CLS_25290 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CLS_28420 Predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CLS_34160 Predicted rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CLS_17370 rRNA methylases K03437 spoU; RNA methyltransferase, TrmH family
D CLS_15080 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLS_25910 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CLS_10800 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CLS_14870 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CLS_17470 Uncharacterized protein conserved in bacteria K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D CLS_14040 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CLS_00960 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CLS_12310 Inactive homolog of metal-dependent proteases, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CLS_12380 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CLS_12300 conserved hypothetical nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CLS_17340 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CLS_27770 Predicted nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CLS_37830 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cso03012]
D CLS_08670 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D CLS_20850 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CLS_16420 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D CLS_12500 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CLS_38690 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D CLS_08970 selenocysteine-specific translation elongation factor SelB K03833 selB; selenocysteine-specific elongation factor
D CLS_12270 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D CLS_24330 ribosome recycling factor K02838 frr; ribosome recycling factor
D CLS_12260 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CLS_14230 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CLS_35100 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CLS_38350 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D CLS_37240 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cso03110]
D CLS_03580 ATPases with chaperone activity, ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CLS_11450 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CLS_22760 ATPases with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CLS_13920 endopeptidase Clp ATP-binding regulatory subunit (clpX) K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CLS_39060 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CLS_14610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CLS_37740 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLS_16340 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLS_37750 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLS_09990 Molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D CLS_08520 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D CLS_16330 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D CLS_35390 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CLS_06060 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLS_15710 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLS_17540 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLS_28480 Subtilisin-like serine proteases K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D CLS_35690 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CLS_14540 hypothetical protein K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CLS_08900 Thioredoxin domain-containing protein K03671 TXN; thioredoxin
D CLS_10350 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:cso04131]
D CLS_28890 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLS_04310 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLS_14610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cso03051]
D CLS_14610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cso03032]
D CLS_00900 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CLS_05920 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLS_10130 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLS_06780 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D CLS_00740 replicative DNA helicase loader DnaI K02315 dnaC; DNA replication protein DnaC
D CLS_21310 DNA replication protein K02315 dnaC; DNA replication protein DnaC
D CLS_18780 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D CLS_29750 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D CLS_29580 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D CLS_28450 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLS_10060 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLS_15830 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLS_24410 DNA polymerase III, alpha chain, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLS_05930 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLS_02290 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLS_34100 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLS_01070 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLS_25330 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLS_27840 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLS_03430 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_06640 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_05970 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLS_28050 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLS_05960 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLS_24180 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLS_04840 DNA topoisomerase III, bacteria and conjugative plasmid K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLS_00340 DNA topoisomerase III, bacteria and conjugative plasmid K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLS_27930 Topoisomerase IA K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLS_29900 DNA topoisomerase III, bacteria and conjugative plasmid K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cso03036]
D CLS_24580 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLS_00900 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CLS_05920 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLS_24590 condensin subunit Smc K03529 smc; chromosome segregation protein
D CLS_30610 Uncharacterized conserved protein K05896 scpA; segregation and condensation protein A
D CLS_30630 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CLS_15440 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLS_38060 Septum formation initiator. K03586 ftsL; cell division protein FtsL
D CLS_15450 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CLS_20100 Cell division protein ZapA. K09888 zapA; cell division protein ZapA
D CLS_03410 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLS_15090 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLS_26140 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLS_26130 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLS_26120 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CLS_36200 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLS_26170 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CLS_26110 Bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA
D CLS_05730 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CLS_05650 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLS_05720 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLS_05770 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLS_05760 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLS_25900 Site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC
D CLS_04170 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD
D CLS_31810 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLS_06010 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLS_02200 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLS_02210 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLS_09150 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLS_32440 Uncharacterized conserved protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CLS_06980 Uncharacterized conserved protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CLS_33410 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cso03400]
D CLS_34570 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CLS_36370 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CLS_17430 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CLS_11040 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLS_03210 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLS_22850 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CLS_10900 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLS_07260 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLS_30680 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLS_34700 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLS_08320 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLS_33270 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLS_03430 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_06640 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLS_27840 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLS_06090 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLS_15580 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CLS_15760 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CLS_30820 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLS_36090 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLS_36100 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLS_26850 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLS_14240 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLS_10630 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLS_13340 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLS_15830 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLS_24410 DNA polymerase III, alpha chain, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLS_05930 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLS_02290 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLS_34100 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLS_01070 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLS_10060 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLS_36210 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLS_04100 protein RecA K03553 recA; recombination protein RecA
D CLS_20080 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLS_20090 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLS_27130 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CLS_05950 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLS_26700 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLS_18750 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLS_01090 recombination protein RecR K06187 recR; recombination protein RecR
D CLS_13400 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CLS_25490 Penicillin-binding protein-related factor A, putative recombinase K03700 recU; recombination protein U
D CLS_18020 recombination helicase AddA, Firmicutes type K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CLS_05970 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLS_28050 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLS_05960 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLS_24180 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLS_00900 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CLS_05250 Nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CLS_06650 Nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CLS_25880 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLS_04110 Uncharacterized protein conserved in bacteria K03565 recX; regulatory protein
D CLS_08690 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cso03029]
D CLS_08670 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D CLS_16420 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D CLS_12500 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CLS_38690 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D CLS_30280 GTP-binding protein Era K03595 era; GTPase
D CLS_38740 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLS_17090 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLS_30310 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLS_10060 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLS_37740 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLS_16340 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLS_16330 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D CLS_37750 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLS_15060 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLS_14610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cso02000]
D CLS_04590 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLS_06380 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLS_04580 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLS_06390 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLS_20240 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_02950 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_02960 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_28290 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_20250 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLS_01530 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLS_30790 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLS_11410 ATPase components of ABC transporters with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CLS_34710 ATPase components of ABC transporters with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein
D CLS_11910 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLS_11900 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLS_11890 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLS_11500 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D CLS_16360 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D CLS_11490 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein
D CLS_16370 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein
D CLS_11480 ABC-type spermidine/putrescine transport systems, ATPase components K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLS_16380 ABC-type spermidine/putrescine transport systems, ATPase components K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLS_34280 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLS_34290 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D CLS_34300 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLS_04430 ABC-type Fe3+ transport system, periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLS_27600 ABC-type uncharacterized transport system, periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLS_04410 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLS_27580 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLS_04420 ABC-type uncharacterized transport system, permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLS_27590 ABC-type spermidine/putrescine transport system, permease component I K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLS_04400 ABC-type spermidine/putrescine transport systems, ATPase components K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLS_27570 ABC-type spermidine/putrescine transport systems, ATPase components K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLS_32830 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLS_32840 glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLS_31150 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLS_08560 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLS_31140 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLS_38840 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLS_08550 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLS_31130 ABC-type multidrug transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLS_38820 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLS_15410 ABC-type sugar transport systems, ATPase components K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLS_27410 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLS_27450 ABC-type sugar transport system, periplasmic component K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D CLS_27460 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10189 lacF; lactose/L-arabinose transport system permease protein
D CLS_33240 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CLS_33210 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10541 mglC; methyl-galactoside transport system permease protein
D CLS_33230 ABC-type sugar transport system, ATPase component K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D CLS_19680 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D CLS_21020 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D CLS_19670 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10440 rbsC; ribose transport system permease protein
D CLS_19740 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLS_19660 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLS_30440 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CLS_30470 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D CLS_30460 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CLS_11350 ABC-type sugar transport system, periplasmic component K17213 K17213; inositol transport system substrate-binding protein
D CLS_11340 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K17214 K17214; inositol transport system permease protein
D CLS_11330 ABC-type sugar transport system, ATPase component K17215 K17215; inositol transport system ATP-binding protein
D CLS_00620 ABC-type sugar transport system, periplasmic component K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CLS_34510 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CLS_00610 ABC-type sugar transport system, permease component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CLS_34530 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CLS_34540 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CLS_27980 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CLS_28000 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D CLS_27990 Uncharacterized ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein
D CLS_28010 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CLS_03060 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K02025 ABC.MS.P; multiple sugar transport system permease protein
D CLS_19920 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D CLS_19930 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D CLS_19960 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLS_09110 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CLS_31290 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CLS_31300 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D CLS_09120 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K17077 artQ; arginine/lysine/histidine transport system permease protein
D CLS_31310 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CLS_26610 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLS_26590 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CLS_26580 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D CLS_26570 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLS_26560 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLS_24250 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D CLS_24240 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CLS_24230 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CLS_27260 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CLS_38640 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CLS_27250 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CLS_38630 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CLS_38620 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CLS_35440 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLS_35450 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLS_35640 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLS_35650 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K02029 ABC.PA.P; polar amino acid transport system permease protein
D CLS_35660 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CLS_16480 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLS_16490 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLS_16440 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein
D CLS_16450 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D CLS_14660 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CLS_16460 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CLS_14670 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CLS_16470 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CLS_03780 ABC-type dipeptide transport system, periplasmic component K13889 gsiB; glutathione transport system substrate-binding protein
D CLS_03790 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K13890 gsiC; glutathione transport system permease protein
D CLS_03800 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K13891 gsiD; glutathione transport system permease protein
D CLS_14620 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLS_09850 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLS_38480 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLS_11280 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLS_11230 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLS_09860 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLS_38490 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLS_14650 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLS_11240 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLS_09870 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLS_03810 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_11730 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_09880 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_38510 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_11250 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLS_09890 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLS_03820 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLS_11260 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLS_17510 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CLS_17530 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CLS_17520 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLS_18050 ABC-type cobalt transport system, periplasmic component K02009 cbiN; cobalt/nickel transport protein
D CLS_18040 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLS_18060 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLS_18030 cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLS_08510 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CLS_35870 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CLS_06370 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D CLS_04600 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D CLS_35240 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CLS_06350 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CLS_06360 ATPase components of various ABC-type transport systems, contain duplicated ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLS_35230 cobalt transport protein ATP-binding subunit K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLS_04610 ATPase components of various ABC-type transport systems, contain duplicated ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLS_11650 ABC-type polysaccharide/polyol phosphate export systems, permease component K09692 tagG; teichoic acid transport system permease protein
D CLS_36450 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CLS_34010 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein
D CLS_34000 ABC-type uncharacterized transport system. K25153 gldG; gliding motility-associatede transport system auxiliary component
D CLS_29440 hypothetical protein K19310 bcrB; bacitracin transport system permease protein
D CLS_29420 ABC-type multidrug transport system, ATPase component K19309 bcrA; bacitracin transport system ATP-binding protein
D CLS_24740 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D CLS_24750 ABC-type multidrug transport system, ATPase component K25148 berA; beta-exotoxin I transport system ATP-binding protein
D CLS_15450 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CLS_15440 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLS_07180 ABC-2 type transporter. K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLS_24730 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLS_07890 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLS_37880 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLS_08310 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLS_06480 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLS_37890 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLS_36700 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLS_06470 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLS_07480 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLS_31450 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLS_08300 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLS_36690 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLS_07170 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLS_07880 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLS_37850 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLS_07280 Predicted permease. K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_07520 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_07530 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_07540 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_07550 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_03250 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_06940 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_06840 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_06860 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_21890 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_30350 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLS_07270 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_07560 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_07620 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_03240 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_06870 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_06960 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_06830 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_21920 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_30340 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_28360 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLS_28520 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CLS_00500 Di-and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D CLS_18330 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D CLS_01720 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_11430 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_03620 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_18870 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_17350 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_37620 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLS_19650 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_18860 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_03540 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_31260 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_31510 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_34370 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_28620 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_22590 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_12510 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_10080 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_17260 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_32930 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_35480 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_13800 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_14780 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLS_13750 Major Facilitator Superfamily. K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CLS_05320 Major Facilitator Superfamily. K18214 tetP_A; MFS transporter, DHA3 family, tetracycline resistance protein
D CLS_03320 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLS_17630 PTS HPr component phosphorylation site. K02784 ptsH; phosphocarrier protein HPr
D CLS_03310 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CLS_19150 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CLS_24500 Phosphotransferase system, HPr-related proteins K02784 ptsH; phosphocarrier protein HPr
D CLS_22830 PTS HPr component phosphorylation site. K02784 ptsH; phosphocarrier protein HPr
D CLS_32020 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLS_24510 PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2) K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLS_10310 PTS system maltose-specific IIA component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIB component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIC component, Glc family (TC 4.A.1.1.11) K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLS_12640 PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6) K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLS_00560 PTS system, glucose-like IIB component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLS_37120 Phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLS_37130 Phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLS_37140 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D CLS_12850 dihydroxyacetone kinase DhaM subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D CLS_23790 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) K02440 glpF; glycerol uptake facilitator
D CLS_37030 MIP family channel proteins K02440 glpF; glycerol uptake facilitator
D CLS_36950 Formate/nitrite family of transporters K21993 fdhC; formate transporter
D CLS_10750 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D CLS_37630 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter
D CLS_37910 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter
D CLS_20930 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLS_23650 Carbon dioxide concentrating mechanism/carboxysome shell protein K27260 pduA; bacterial microcompartment shell protein
D CLS_20590 Amino acid transporters K16238 eat; ethanolamine permease
D CLS_33450 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D CLS_33120 Uncharacterized protein conserved in bacteria K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLS_08430 sodium--glutamate symport carrier (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family
D CLS_12970 sodium--glutamate symport carrier (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family
D CLS_02180 sodium--glutamate symport carrier (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family
D CLS_33500 Na+/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CLS_30400 sodium--glutamate symport carrier (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family
D CLS_28860 Na+/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CLS_08150 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D CLS_18200 transporter, NhaC family (TC 2.A.35) K03315 nhaC; Na+:H+ antiporter, NhaC family
D CLS_00850 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D CLS_00780 sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2) K26730 napA; Na+:H+ antiporter
D CLS_04080 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D CLS_21130 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein
D CLS_04070 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D CLS_21140 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D CLS_37680 uracil-xanthine permease K02824 uraA; uracil permease
D CLS_03190 Permeases K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLS_24620 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D CLS_20960 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D CLS_02910 Chromate transport protein ChrA K07240 chrA; chromate transporter
D CLS_02920 Chromate transport protein ChrA K07240 chrA; chromate transporter
D CLS_22470 Chromate transport protein ChrA K07240 chrA; chromate transporter
D CLS_03560 Sulfate permease and related transporters (MFS superfamily) K03321 TC.SULP; sulfate permease, SulP family
D CLS_02090 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CLS_27290 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D CLS_31230 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D CLS_26390 Uncharacterized membrane protein, putative virulence factor K06409 spoVB; stage V sporulation protein B
D CLS_31250 Membrane protein involved in the export of O-antigen and teichoic acid K06409 spoVB; stage V sporulation protein B
D CLS_33820 Predicted permeases K24180 mleP; malate permease and related proteins
D CLS_15670 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D CLS_33180 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D CLS_33170 Predicted membrane protein K26606 azlD; branched chain amino acid efflux pump
D CLS_15680 Predicted branched-chain amino acid permeases (azaleucine resistance) K26606 azlD; branched chain amino acid efflux pump
D CLS_13290 Predicted membrane protein K23675 fmnP; riboflavin transporter
D CLS_16130 vacuolar-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CLS_22680 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_13260 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_16240 glutaconyl-CoA decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CLS_22690 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CLS_22650 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D CLS_16230 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CLS_22670 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CLS_16210 Oxaloacetate decarboxylase, gamma chain. K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CLS_22660 Oxaloacetate decarboxylase, gamma chain. K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CLS_16270 glutaconyl-CoA decarboxylase alpha subunit K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D CLS_31780 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLS_15590 hypothetical protein K04758 feoA; ferrous iron transport protein A
D CLS_13580 Fe2+ transport system protein B K04759 feoB; ferrous iron transport protein B
D CLS_18420 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:cso02044]
D CLS_02510 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLS_01640 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CLS_02400 Type IV leader peptidase family. K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CLS_01690 Type II secretory pathway, component PulF K12278 mshG; MSHA biogenesis protein MshG
D CLS_33110 competence protein ComEA helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA
D CLS_34070 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLS_29010 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D CLS_19030 Predicted hydrolase (metallo-beta-lactamase superfamily) K02238 comEC; competence protein ComEC
D CLS_25080 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CLS_29370 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CLS_32180 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC
D CLS_37230 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLS_14030 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CLS_36280 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D CLS_28670 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLS_35040 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CLS_25250 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLS_24600 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLS_14050 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
C 02042 Bacterial toxins [BR:cso02042]
D CLS_20930 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLS_11780 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cso02022]
D CLS_27270 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLS_27280 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLS_39270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D CLS_06910 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLS_39260 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLS_07200 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLS_04690 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLS_08270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLS_04200 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D CLS_08360 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLS_28870 Response regulator of citrate/malate metabolism K11615 malR; two-component system, CitB family, response regulator MalR
D CLS_23770 Predicted sensor domain K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLS_35290 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 atoC; two-component system, NtrC family, response regulator AtoC
D CLS_12940 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLS_12950 FOG: CheY-like receiver K07719 glnL; two-component system, response regulator GlnL
D CLS_21010 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CLS_30420 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CLS_19720 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CLS_20610 AraC-type DNA-binding domain-containing proteins K07720 yesN; two-component system, response regulator YesN
D CLS_21000 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D CLS_23780 AraC-type DNA-binding domain-containing proteins K07720 yesN; two-component system, response regulator YesN
D CLS_32090 Signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:cso02035]
D CLS_03590 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CLS_01640 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CLS_02510 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLS_02400 Type IV leader peptidase family. K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cso04812]
D CLS_36200 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLS_06280 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM
D CLS_26140 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLS_26130 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLS_26120 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CLS_05730 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CLS_05650 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLS_05720 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cso04147]
D CLS_14610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CLS_28240 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLS_28890 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLS_28910 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLS_04310 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLS_27300 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLS_11170 3-Cys thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CLS_16340 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLS_37740 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLS_00200 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLS_17210 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLS_12500 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CLS_00110 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLS_16160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLS_25700 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLS_35060 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLS_17020 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLS_17010 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLS_33260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLS_10740 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CLS_02350 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CLS_14960 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLS_37020 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLS_13720 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_18950 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLS_00480 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_14110 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_16040 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLS_36840 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CLS_28920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cso02048]
D CLS_03870 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CLS_03930 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D CLS_03910 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D CLS_03920 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D CLS_03900 CRISPR-associated protein, Csd5d family K19119 cas5d; CRISPR-associated protein Cas5d
D CLS_09440 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CLS_19350 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CLS_32430 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CLS_14400 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CLS_14430 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CLS_19320 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CLS_14440 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLS_09400 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLS_09420 type I restriction system adenine methylase (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLS_19300 type I restriction system adenine methylase (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLS_32420 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLS_04910 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CLS_17980 Restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D CLS_30880 Uncharacterized protein conserved in bacteria K01156 res; type III restriction enzyme [EC:3.1.21.5]
D CLS_30890 Adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CLS_17950 Adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CLS_14830 GTPase subunit of restriction endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CLS_32650 Restriction endonuclease K07448 mrr; restriction system protein
D CLS_04540 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLS_05200 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLS_29530 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D CLS_35940 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D CLS_35950 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D CLS_29540 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D CLS_09480 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D CLS_34230 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D CLS_36200 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLS_37920 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLS_15060 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cso01504]
D CLS_07360 Streptomycin adenylyltransferase. K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D CLS_05320 Major Facilitator Superfamily. K18214 tetP_A; MFS transporter, DHA3 family, tetracycline resistance protein
D CLS_00850 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D CLS_05330 small GTP-binding protein domain K18220 tetM; ribosomal protection tetracycline resistance protein
D CLS_06700 small GTP-binding protein domain K18220 tetM; ribosomal protection tetracycline resistance protein
D CLS_11410 ATPase components of ABC transporters with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CLS_13750 Major Facilitator Superfamily. K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CLS_24270 Acetyltransferase (isoleucine patch superfamily) K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D CLS_17840 Chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLS_19820 Chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLS_31020 Beta-lactamase class D K02172 blaR1; bla regulator protein blaR1
D CLS_36050 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D CLS_39260 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLS_07200 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLS_04690 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLS_08270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLS_04640 alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D CLS_04660 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D CLS_04650 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CLS_17770 Predicted transcriptional regulators K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cso00537]
D CLS_27300 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cso03100]
D CLS_T_39640 CLS_T_39640 K14218 tRNA-Ala; tRNA Ala
D CLS_T_39650 CLS_T_39650 K14218 tRNA-Ala; tRNA Ala
D CLS_T_39820 CLS_T_39820 K14219 tRNA-Arg; tRNA Arg
D CLS_T_39720 CLS_T_39720 K14219 tRNA-Arg; tRNA Arg
D CLS_T_39810 CLS_T_39810 K14219 tRNA-Arg; tRNA Arg
D CLS_T_39490 CLS_T_39490 K14219 tRNA-Arg; tRNA Arg
D CLS_T_39560 CLS_T_39560 K14220 tRNA-Asn; tRNA Asn
D CLS_T_39400 CLS_T_39400 K14221 tRNA-Asp; tRNA Asp
D CLS_T_39580 CLS_T_39580 K14222 tRNA-Cys; tRNA Cys
D CLS_T_39510 CLS_T_39510 K14223 tRNA-Gln; tRNA Gln
D CLS_T_39620 CLS_T_39620 K14223 tRNA-Gln; tRNA Gln
D CLS_T_39800 CLS_T_39800 K14223 tRNA-Gln; tRNA Gln
D CLS_T_39570 CLS_T_39570 K14224 tRNA-Glu; tRNA Glu
D CLS_T_39670 CLS_T_39670 K14224 tRNA-Glu; tRNA Glu
D CLS_T_39380 CLS_T_39380 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39480 CLS_T_39480 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39390 CLS_T_39390 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39710 CLS_T_39710 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39530 CLS_T_39530 K14225 tRNA-Gly; tRNA Gly
D CLS_T_39500 CLS_T_39500 K14226 tRNA-His; tRNA His
D CLS_T_39760 CLS_T_39760 K14228 tRNA-Leu; tRNA Leu
D CLS_T_39730 CLS_T_39730 K14228 tRNA-Leu; tRNA Leu
D CLS_T_39460 CLS_T_39460 K14229 tRNA-Lys; tRNA Lys
D CLS_T_39520 CLS_T_39520 K14229 tRNA-Lys; tRNA Lys
D CLS_T_39350 CLS_T_39350 K14229 tRNA-Lys; tRNA Lys
D CLS_T_39360 CLS_T_39360 K14229 tRNA-Lys; tRNA Lys
D CLS_T_39780 CLS_T_39780 K14230 tRNA-Met; tRNA Met
D CLS_T_39790 CLS_T_39790 K14230 tRNA-Met; tRNA Met
D CLS_T_39440 CLS_T_39440 K14230 tRNA-Met; tRNA Met
D CLS_T_39370 CLS_T_39370 K14231 tRNA-Phe; tRNA Phe
D CLS_T_39450 CLS_T_39450 K14231 tRNA-Phe; tRNA Phe
D CLS_T_39740 CLS_T_39740 K14232 tRNA-Pro; tRNA Pro
D CLS_T_39470 CLS_T_39470 K14232 tRNA-Pro; tRNA Pro
D CLS_T_39700 CLS_T_39700 K14232 tRNA-Pro; tRNA Pro
D CLS_T_39660 CLS_T_39660 K14232 tRNA-Pro; tRNA Pro
D CLS_T_39590 CLS_T_39590 K14233 tRNA-Ser; tRNA Ser
D CLS_T_39600 CLS_T_39600 K14233 tRNA-Ser; tRNA Ser
D CLS_T_39540 CLS_T_39540 K14233 tRNA-Ser; tRNA Ser
D CLS_T_39610 CLS_T_39610 K14233 tRNA-Ser; tRNA Ser
D CLS_T_39680 CLS_T_39680 K14234 tRNA-Thr; tRNA Thr
D CLS_T_39690 CLS_T_39690 K14234 tRNA-Thr; tRNA Thr
D CLS_T_39420 CLS_T_39420 K14234 tRNA-Thr; tRNA Thr
D CLS_T_39630 CLS_T_39630 K14235 tRNA-Trp; tRNA Trp
D CLS_T_39340 CLS_T_39340 K14236 tRNA-Tyr; tRNA Tyr
D CLS_T_39430 CLS_T_39430 K14236 tRNA-Tyr; tRNA Tyr
D CLS_T_39410 CLS_T_39410 K14237 tRNA-Val; tRNA Val
D CLS_T_39770 CLS_T_39770 K14237 tRNA-Val; tRNA Val
D CLS_T_39750 CLS_T_39750 K14237 tRNA-Val; tRNA Val
D CLS_T_39550 CLS_T_39550 K14238 tRNA-Sec; tRNA Sec
D CLS_R_39840 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLS_R_39830 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CLS_13470 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D CLS_10030 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D CLS_17730 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D CLS_12090 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D CLS_09940 Uncharacterized flavoproteins K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D CLS_28260 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D CLS_02870 hydrogenases, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D CLS_38870 Desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D CLS_03730 Ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2]
D CLS_18300 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLS_23110 Protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CLS_08920 Glycine reductase complex selenoprotein A. K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLS_08910 Glycine reductase complex selenoprotein A. K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLS_08860 Glycine/sarcosine/betaine reductase component B subunits. K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D CLS_08880 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D CLS_08870 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D CLS_08940 Fatty acid synthesis protein. K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLS_08930 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLS_30660 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CLS_01030 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLS_23630 glycerol dehydratase, cobalamin-independent, small subunit K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLS_15660 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLS_12610 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CLS_12620 Acetyltransferase (isoleucine patch superfamily) K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D CLS_24660 Acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CLS_36550 Acetyltransferases K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CLS_33940 Acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D CLS_11750 NCAIR mutase (PurE)-related proteins K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CLS_38010 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CLS_19050 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CLS_33560 Sugar kinases, ribokinase family K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D CLS_33460 Sugar kinases, ribokinase family K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D CLS_13510 Uncharacterized protein conserved in bacteria K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CLS_33650 Uncharacterized protein conserved in bacteria K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CLS_26730 Predicted kinase related to dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CLS_31970 Reverse transcriptase (RNA-dependent DNA polymerase). K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLS_19260 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLS_34420 Reverse transcriptase (RNA-dependent DNA polymerase). K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLS_34650 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLS_03290 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CLS_20510 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CLS_22750 Arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CLS_22420 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CLS_11080 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D CLS_19160 conserved hypothetical protein TIGR00051 K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CLS_00950 Stage II sporulation protein E (SpoIIE). K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CLS_31800 Capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CLS_24120 Predicted metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CLS_38320 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D CLS_10110 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CLS_38810 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CLS_31830 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CLS_21800 Negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLS_27120 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLS_04020 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLS_08350 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLS_08590 Predicted amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CLS_14910 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLS_33470 Predicted phosphosugar isomerases K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D CLS_20890 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CLS_16290 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB K20903 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha [EC:4.2.1.167]
D CLS_16300 2-hydroxyglutaryl-CoA dehydratase beta subunit K20904 hgdB; (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta [EC:4.2.1.167]
D CLS_11760 conserved hypothetical protein TIGR00299 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CLS_33510 Sugar phosphate isomerases/epimerases K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D CLS_33520 Sugar phosphate isomerases/epimerases K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D CLS_16280 2-hydroxyglutaryl-CoA dehydratase activator protein K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLS_01850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D CLS_31910 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CLS_31920 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CLS_31870 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CLS_32100 copper-(or silver)-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CLS_09810 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLS_16530 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLS_36730 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D CLS_13660 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D CLS_15810 Phosphotransferase System HPr (HPr) Family K11184 chr; catabolite repression HPr-like protein
D CLS_23010 hypothetical protein K11184 chr; catabolite repression HPr-like protein
D CLS_29240 PTS HPr component phosphorylation site. K11184 chr; catabolite repression HPr-like protein
C 99982 Energy metabolism
D CLS_31900 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CLS_31890 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CLS_31880 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CLS_15070 FeS cluster assembly scaffold protein NifU, Clostridium type K04488 iscU; nitrogen fixation protein NifU and related proteins
D CLS_38600 hypothetical protein K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
D CLS_28980 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CLS_14950 Ethanolamine utilization protein K04023 eutH; ethanolamine transporter
D CLS_23740 ethanolamine utilization protein EutJ family protein K04024 eutJ; ethanolamine utilization protein EutJ
D CLS_23590 Ethanolamine utilization protein K04031 eutS; ethanolamine utilization protein EutS
C 99986 Glycan metabolism
D CLS_19770 Cell Wall Hydrolase. K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D CLS_23580 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CLS_20050 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D CLS_37300 Transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D CLS_26520 Predicted exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D CLS_03570 Uncharacterized conserved protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CLS_22740 Uncharacterized protein with conserved CXXC pairs K19411 mcsA; protein arginine kinase activator
D CLS_13080 trigger factor K03545 tig; trigger factor
D CLS_39040 trigger factor K03545 tig; trigger factor
D CLS_28630 SsrA-binding protein K03664 smpB; SsrA-binding protein
D CLS_34130 Hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE
D CLS_11880 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
D CLS_11970 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor
D CLS_33860 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D CLS_09530 DNA repair proteins K03630 radC; DNA repair protein RadC
D CLS_25340 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease
D CLS_24170 DNA protecting protein DprA K04096 smf; DNA processing protein
D CLS_36410 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 ycaJ; putative ATPase
D CLS_32770 Recombination protein MgsA K07478 ycaJ; putative ATPase
D CLS_31530 hypothetical protein K07484 K07484; transposase
D CLS_07840 Transposase and inactivated derivatives K07485 K07485; transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CLS_12150 Amino acid transporters K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLS_19010 citrate transporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D CLS_37340 Choline-glycine betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D CLS_13850 Phosphate/sulphate permeases K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CLS_34220 Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLS_38000 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLS_20300 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLS_31100 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLS_16650 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLS_30740 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLS_26770 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLS_35680 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLS_10530 branched-chain amino acid uptake carrier K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D CLS_21160 hypothetical protein K06333 cotJB; spore coat protein JB
D CLS_22630 hypothetical protein K06333 cotJB; spore coat protein JB
D CLS_21830 Mn-containing catalase K06334 cotJC; spore coat protein JC
D CLS_22620 Mn-containing catalase K06334 cotJC; spore coat protein JC
D CLS_05840 Predicted RNA-binding protein K06346 jag; spoIIIJ-associated protein
D CLS_35330 biotin-dependent carboxylase uncharacterized domain K06350 kipA; antagonist of KipI
D CLS_35320 conserved hypothetical protein TIGR00370 K06351 kipI; inhibitor of KinA
D CLS_01910 Uncharacterized membrane protein K06374 spmB; spore maturation protein B
D CLS_20500 anti-anti-sigma factor K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CLS_29120 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D CLS_35820 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D CLS_32730 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D CLS_13200 Stage III sporulation protein AE (spore_III_AE). K06394 spoIIIAE; stage III sporulation protein AE
D CLS_13210 Stage III sporulation protein AF (Spore_III_AF). K06395 spoIIIAF; stage III sporulation protein AF
D CLS_13220 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG
D CLS_13230 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH
D CLS_26540 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CLS_31010 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_24940 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_21840 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_22150 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_29380 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_29780 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_30020 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_18610 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_18700 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_24690 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_06810 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CLS_20550 Stage V sporulation protein AA. K06403 spoVAA; stage V sporulation protein AA
D CLS_20560 hypothetical protein K06404 spoVAB; stage V sporulation protein AB
D CLS_20570 SpoVA protein. K06405 spoVAC; stage V sporulation protein AC
D CLS_20620 Stage V sporulation protein AD (SpoVAD). K06406 spoVAD; stage V sporulation protein AD
D CLS_17310 Bacillus/Clostridium GerA spore germination protein. K06408 spoVAF; stage V sporulation protein AF
D CLS_00840 Uncharacterized protein, involved in the regulation of septum location K06412 spoVG; stage V sporulation protein G
D CLS_25360 Small, acid-soluble spore proteins, alpha/beta type. K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLS_26430 Putative stage IV sporulation protein YqfD. K06438 yqfD; similar to stage IV sporulation protein
D CLS_29000 Spore germination protein K06298 gerM; germination protein M
C 99993 Cell motility
C 99995 Signaling proteins
D CLS_20660 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CLS_27810 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D CLS_26420 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CLS_36510 Predicted ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CLS_20970 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
D CLS_30330 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CLS_23640 Ethanolamine utilization protein K27263 pduB; bacterial microcompartment shell protein
D CLS_23720 Carbon dioxide concentrating mechanism/carboxysome shell protein K27266 pduJ; bacterial microcompartment shell protein
D CLS_23680 Carbon dioxide concentrating mechanism/carboxysome shell protein K27267 pduK; bacterial microcompartment shell protein
D CLS_23570 Carbon dioxide concentrating mechanism/carboxysome shell protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D CLS_19970 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D CLS_37180 Uncharacterized protein involved in copper resistance K06201 cutC; copper homeostasis protein
D CLS_13440 hemerythrin-like metal-binding domain K07216 hr; hemerythrin
D CLS_24990 hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CLS_04280 Predicted acyltransferase K02348 elaA; ElaA protein
D CLS_13010 Histidinol phosphatase and related hydrolases of the PHP family K04477 ycdX; putative hydrolase
D CLS_31120 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 K07025; putative hydrolase of the HAD superfamily
D CLS_20230 Predicted membrane protein K07058 K07058; membrane protein
D CLS_29300 Uncharacterized conserved protein K03744 lemA; LemA protein
D CLS_00650 Predicted membrane protein K08974 K08974; putative membrane protein
D CLS_17690 CobW/HypB/UreG, nucleotide-binding domain. K08986 ycgQ; putative membrane protein
C 99997 Function unknown
D CLS_01350 Ankyrin repeat. K06867 K06867; uncharacterized protein
D CLS_22600 Integral membrane protein, interacts with FtsH K06890 K06890; uncharacterized protein
D CLS_21630 Phage protein D K06905 D; Bacteriophage probable baseplate hub protein
D CLS_21560 Phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D CLS_21570 Phage tail tube protein FII K06908 FII; Bacteriophage tail tube protein
D CLS_07820 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D CLS_08230 Predicted ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein
D CLS_04030 Predicted DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein
D CLS_08380 hypothetical protein K06950 K06950; uncharacterized protein
D CLS_25270 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D CLS_16970 Predicted RNA-binding protein containing a PIN domain K06962 K06962; uncharacterized protein
D CLS_33530 conserved hypothetical protein TIGR00259 K06971 K06971; uncharacterized protein
D CLS_27100 Predicted Zn-dependent protease K06973 K06973; uncharacterized protein
D CLS_22870 Predicted deacylase K06987 K06987; uncharacterized protein
D CLS_22880 Predicted deacylase K06987 K06987; uncharacterized protein
D CLS_20430 Predicted exporters of the RND superfamily K07003 K07003; uncharacterized protein
D CLS_10960 Predicted flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein
D CLS_19110 Predicted membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein
D CLS_33570 Predicted metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein
D CLS_11160 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain K07069 K07069; uncharacterized protein
D CLS_23040 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLS_18560 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLS_18580 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLS_32890 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLS_35730 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLS_23090 Predicted permeases K07089 K07089; uncharacterized protein
D CLS_20150 Predicted permeases K07090 K07090; uncharacterized protein
D CLS_29160 Predicted permeases K07090 K07090; uncharacterized protein
D CLS_03160 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CLS_27340 Predicted phosphoesterases, related to the Icc protein K07096 K07096; uncharacterized protein
D CLS_25590 Predicted phosphohydrolases K07098 K07098; uncharacterized protein
D CLS_30570 Predicted phosphohydrolases K07098 K07098; uncharacterized protein
D CLS_25460 Short-chain dehydrogenases of various substrate specificities K07124 K07124; uncharacterized protein
D CLS_29320 Sel1 repeat. K07126 K07126; uncharacterized protein
D CLS_06550 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D CLS_06560 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D CLS_09620 hypothetical protein K07133 K07133; uncharacterized protein
D CLS_09650 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D CLS_26340 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D CLS_37310 Uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein
D CLS_27550 Uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein
D CLS_14740 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D CLS_18920 Predicted membrane protein K07149 K07149; uncharacterized protein
D CLS_10910 Uncharacterized membrane protein, possible Na+ channel or pump K07150 K07150; uncharacterized protein
D CLS_17640 Uncharacterized membrane protein, possible Na+ channel or pump K07150 K07150; uncharacterized protein
D CLS_38260 Uncharacterized conserved protein K09117 K09117; uncharacterized protein
D CLS_27800 Uncharacterized conserved protein K09157 K09157; uncharacterized protein
D CLS_36520 uncharacterized domain HDIG K09163 K09163; uncharacterized protein
D CLS_15030 Uncharacterized conserved protein K09706 K09706; uncharacterized protein
D CLS_08390 Uncharacterized protein conserved in bacteria K09775 K09775; uncharacterized protein
D CLS_11180 Uncharacterized conserved protein K09779 K09779; uncharacterized protein
D CLS_25240 Uncharacterized protein conserved in bacteria K09787 K09787; uncharacterized protein
D CLS_33130 Uncharacterized conserved protein K09807 K09807; uncharacterized protein
D CLS_14900 Uncharacterized protein conserved in bacteria K00243 K00243; uncharacterized protein
D CLS_01170 Uncharacterized protein conserved in bacteria K09925 K09925; uncharacterized protein
D CLS_27650 Uncharacterized protein conserved in bacteria K09931 K09931; uncharacterized protein
D CLS_37200 Uncharacterized conserved protein K09963 K09963; uncharacterized protein
D CLS_20070 Predicted exonuclease K07502 yprB; uncharacterized protein
D CLS_25810 Predicted ribosomal protein K07584 ysxB; uncharacterized protein
D CLS_13860 Phosphate transport regulator (distant homolog of PhoU) K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024