+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Ceratosolen solmsi marchali (fig wasp)
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 105366341 rRNA 2'-O-methyltransferase fibrillarin isoform X1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 105367836 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 105360548 nucleolar protein 58 K14565 NOP58; nucleolar protein 58
D 105366974 NHP2-like protein 1 homolog K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D 105368768 box C/D snoRNA protein 1 K27833 ZNHIT6; box C/D snoRNA protein 1
C Box H/ACA snoRNPs
D 105364215 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 105363452 probable H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 105361748 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D 105361679 H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
D 105363808 protein SHQ1 homolog K14764 SHQ1; protein SHQ1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D 105362201 LOW QUALITY PROTEIN: U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 105365010 U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D 105359372 U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D 105361090 neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D 105363212 ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7
D 105364456 periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2
D 105368053 nucleolar protein 14 homolog K14766 NOP14; nucleolar protein 14
D 105365966 something about silencing protein 10-like K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D 105361508 cirhin K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D 105359073 WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D 105360684 U3 small nucleolar RNA-associated protein 6 homolog isoform X1 K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D 105368820 WD repeat-containing protein 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D 105368281 HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D 105361573 probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D 105368093 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D 105366855 transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D 105367536 U3 small nucleolar RNA-associated protein 14 homolog B K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D 105365846 U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D 105366191 WD repeat-containing protein 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D 105367858 U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D 105368877 nucleolar complex protein 4 homolog B K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D 105360404 small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D 105363759 WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D 105362165 nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D 105360073 rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D 105363559 rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 105360946 digestive organ expansion factor homolog K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D 105359554 ribosomal L1 domain-containing protein CG13096 K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D 105360068 probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D 105363758 probable ATP-dependent RNA helicase pitchoune K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 105359920 probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D 105362525 probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D 105359982 LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D 105360462 putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 105364947 probable ATP-dependent RNA helicase kurz K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D 105366960 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D 105367517 ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D 105368531 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D 105367201 RNA exonuclease 4-like K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D 105362263 RNA exonuclease 4-like K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D 105360231 lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D 105361951 casein kinase II subunit alpha isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 105368879 casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D 105362824 protein Aatf K14782 AATF; protein AATF/BFR2
D 105364172 ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D 105366911 pre-rRNA-processing protein esf2-like K14785 ESF2; ESF2/ABP1 family protein
D 105361502 protein KRI1 homolog K14786 KRI1; protein KRI1
D 105365764 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein
D 105364522 probable RNA-binding protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1
D 105366418 N-acetyltransferase 10 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D 105366267 nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2
D 105367389 nucleolar protein 9 K14790 NOP9; nucleolar protein 9
D 105360785 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 105363746 RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D 105360846 protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5
D 105362488 U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9
D 105361597 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 105367085 ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36
D 105365604 DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D 105367504 serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D 105367022 serine/threonine-protein kinase rio2-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D 105364852 serine/threonine-protein kinase rio2-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D 105364853 serine/threonine-protein kinase rio2-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D 105363660 probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D 105366821 probable 18S rRNA (guanine-N(7))-methyltransferase isoform X1 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D 105366966 uncharacterized protein LOC105366966 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5
D 105367490 bystin K14797 ENP1; essential nuclear protein 1
D 105366123 protein LTV1 homolog K14798 LTV1; protein LTV1
D 105364764 RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1
D 105364738 RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1
D 105365474 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 105359423 adenylate kinase isoenzyme 6 K18532 AK6; adenylate kinase [EC:2.7.4.3]
D 105359712 pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1
D 105363741 uncharacterized protein LOC105363741 K14800 TSR2; pre-rRNA-processing protein TSR2
D 105368711 ribosome biogenesis protein TSR3 homolog K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D 105361507 programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4
D 105363469 programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4
D 105363113 active regulator of SIRT1-like K26536 RPS19BP1; active regulator of SIRT1
D 105366028 exportin-1 K14290 XPO1; exportin-1
D 105360722 importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1
D 105362914 transportin-1 K18752 TNPO1; transportin-1
D 105365055 importin-4-like K20221 IPO4; importin-4
D 105364349 importin-5 isoform X1 K20222 IPO5; importin-5
D 105365908 importin-7 isoform X1 K20223 IPO7; importin-7
D 105360564 importin-9 K20224 IPO9; importin-9
C Other pre-40S particles
D 105362344 probable phospholipid-transporting ATPase IA K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 105361479 eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J
D 105365503 probable protein phosphatase 2C T23F11.1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16]
D 105362356 ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D 105362200 ATP-dependent RNA helicase p62-like isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 105361799 DEAD-box ATP-dependent RNA helicase 20-like K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 105363758 probable ATP-dependent RNA helicase pitchoune K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 105365786 ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D 105368989 probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 105369034 probable ATP-dependent RNA helicase CG8611 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D 105363061 ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D 105366883 ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D 105363710 ATP-dependent RNA helicase DDX55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D 105360862 probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D 105366740 LOW QUALITY PROTEIN: superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D 105360593 guanine nucleotide-binding protein-like 3 homolog K14538 NUG1; nuclear GTP-binding protein
D 105362760 nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein
D 105365556 probable nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein
D 105363992 elongation factor Tu GTP-binding domain-containing protein 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D 105366516 oligoribonuclease, mitochondrial-like isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 105364147 LOW QUALITY PROTEIN: oligoribonuclease, mitochondrial-like K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 105361320 RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 105361732 putative RNA exonuclease NEF-sp K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 105365383 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D RNase MRP
E 105367289 ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E 105361928 ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E 105359069 uncharacterized protein LOC105359069 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E 105359034 ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E 105360702 ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
E 105365907 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 105364763 ribonuclease P protein subunit p40-like isoform X1 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Kinases
D 105365642 polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D 105363272 ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D 105359622 dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5
D 105366894 eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D 105368802 heat shock protein 68-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 105368644 heat shock 70 kDa protein cognate 4 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 105362389 LOW QUALITY PROTEIN: heat shock 70 kDa protein cognate 4-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 105363133 mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4
D 105368065 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D 105365887 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
D 105365125 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
D 105365008 nuclear RNA export factor 1-like isoform X1 K14284 NXF; nuclear RNA export factor
D 105365889 NTF2-related export protein isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2
D 105365474 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 105367814 zinc finger protein 622 K14816 REI1; pre-60S factor REI1
D 105369000 ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1
D 105364861 LOW QUALITY PROTEIN: spermatogenesis-associated protein 5 K14575 AFG2; AAA family ATPase
D 105361449 cyclin-dependent kinase 2-interacting protein-like K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 105367841 uncharacterized protein LOC105367841 K26053 C1ORF109; ribosome biogenesis protein C1orf109
D 105366028 exportin-1 K14290 XPO1; exportin-1
D 105360722 importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1
D 105362914 transportin-1 K18752 TNPO1; transportin-1
D 105365055 importin-4-like K20221 IPO4; importin-4
D 105364349 importin-5 isoform X1 K20222 IPO5; importin-5
D 105365908 importin-7 isoform X1 K20223 IPO7; importin-7
D 105360564 importin-9 K20224 IPO9; importin-9
D 105364384 dual specificity protein phosphatase 12-like K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D 105361347 testis-expressed sequence 10 protein homolog K14827 IPI1; pre-rRNA-processing protein IPI1
D 105359344 WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3
D 105365063 proline-, glutamic acid- and leucine-rich protein 1-like K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1
C Ribosome quality control proteins
D 105364244 E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D 105366046 nuclear export mediator factor NEMF homolog K24971 NEMF; nuclear export mediator factor NEMF
D 105363493 transitional endoplasmic reticulum ATPase TER94 K13525 VCP; transitional endoplasmic reticulum ATPase
D 105362081 nuclear protein localization protein 4 homolog isoform X1 K14015 NPLOC4; nuclear protein localization protein 4
D 105368789 ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1
D 105368136 putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29]
C Other pre-60S particles
D 105365393 ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1
D 105360524 zinc finger protein 593 homolog K14821 BUD20; bud site selection protein 20
D 105366367 coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1
D 105360572 probable rRNA-processing protein EBP2 homolog K14823 EBP2; rRNA-processing protein EBP2
D 105362979 ribosome biogenesis protein BOP1 homolog K14824 ERB1; ribosome biogenesis protein ERB1
D 105359288 46 kDa FK506-binding nuclear protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8]
D 105364523 p21-activated protein kinase-interacting protein 1-like K14830 MAK11; protein MAK11
D 105362759 protein MAK16 homolog A K14831 MAK16; protein MAK16
D 105360765 CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21
D 105364873 midasin-like K14572 MDN1; midasin
D 105364874 midasin-like K14572 MDN1; midasin
D 105362559 nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2
D 105366805 nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3
D 105366885 probable 28S rRNA (cytosine-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D 105364551 RNA-binding protein 28 K14573 NOP4; nucleolar protein 4
D 105365400 probable RNA-binding protein CG14230 K14836 NOP8; nucleolar protein 8
D 105364828 RNA-binding protein 34-like K14837 NOP12; nucleolar protein 12
D 105367241 MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15
D 105364831 uncharacterized protein CG1785 K14840 NOP53; nucleolar protein 53
D 105366602 WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1
D 105364695 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2
D 105359812 pescadillo homolog K14843 PES1; pescadillo
D 105359600 protein penguin K14844 PUF6; pumilio homology domain family member 6
D 105360785 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 105368275 bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
D 105368084 nuclear valosin-containing protein-like K14571 RIX7; ribosome biogenesis ATPase
D 105361956 probable ribosome production factor 1 K14846 RPF1; ribosome production factor 1
D 105366024 ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2
D 105368230 glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1
D 105364855 ribosomal RNA processing protein 1 homolog K14849 RRP1; ribosomal RNA-processing protein 1
D 105359231 ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D 105361597 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 105362319 ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis
D 105364552 notchless protein homolog 1 K14855 RSA4; ribosome assembly protein 4
D 105364368 protein SDA1 homolog K14856 SDA1; protein SDA1
D 105363428 pre-rRNA processing protein FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D 105359162 protein Peter pan K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D 105364608 translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16
D 105364409 nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D 105366192 ribosome biogenesis protein WDR12 homolog isoform X1 K14863 WDR12; ribosome biogenesis protein
D 105361633 nuclear fragile X mental retardation-interacting protein 1-like K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1
D 105368940 zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C 105361703 protein BCCIP homolog K15262 BCP1; protein BCP1
C 105367832 uncharacterized protein C16C10.8 K15263 LYER; cell growth-regulating nucleolar protein
C 105368562 5-methylcytosine rRNA methyltransferase NSUN4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
C 105361629 probable 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C 105361272 probable 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C 105360721 dimethyladenosine transferase 1, mitochondrial K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-]
C 105366831 probable methyltransferase BTM2 homolog K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C 105361631 rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-]
C 105368311 zinc finger CCHC domain-containing protein 4 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-]
C 105367385 probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
C 105359973 putative ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6]
C 105362304 DNA-binding protein SMUBP-2-like K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
C 105362552 lysine-specific demethylase 8 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
C 105366160 proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein
C 105367374 mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-]
C 105359789 nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 105367836 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 105360293 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D 105364215 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
D 105362537 rRNA methyltransferase 2, mitochondrial K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
B ribosomal protein modification factors
B rRNA processing factors
C 105368531 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C 105367374 mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C 105365428 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024