+D Transcription factors KO #

  Transcription Factors - Corynebacterium simulans

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D WM42_0352 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family D WM42_2475 bacterial regulatory helix-turn-helix, lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D WM42_0236 hypothetical protein K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D WM42_1956 bacterial regulatory helix-turn-helix, lysR family protein K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes C DeoR family D WM42_2469 deoR C terminal sensor domain protein K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D WM42_0784 putative LACI-FAMILY TRANSCRIPTIONAL REGULATOR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D WM42_2520 putative LACI-FAMILY TRANSCRIPTIONAL REGULATOR K02529 galR; LacI family transcriptional regulator, galactose operon repressor C GntR family D WM42_1622 bacterial regulatory s, gntR family protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D WM42_1973 deoR-like helix-turn-helix domain protein K03710 K03710; GntR family transcriptional regulator D WM42_2114 bacterial regulatory s, gntR family protein K03710 K03710; GntR family transcriptional regulator D WM42_0847 bacterial regulatory s, gntR family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D WM42_1789 bacterial regulatory s, tetR family protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA D WM42_0121 acnR; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase C Lrp/AsnC family C LuxR family D WM42_1882 bacterial regulatory s, luxR family protein K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism C MarR family C MerR family D WM42_1689 merR regulatory family protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR C Fur family D WM42_2141 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family C CRP/FNR family D WM42_1157 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family C ArsR family D WM42_1493 cmtR; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor C XRE family D WM42_0819 hypothetical protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D WM42_1105 helix-turn-helix family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D WM42_2445 helix-turn-helix family protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family C Other families D WM42_2483 ideR; iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D WM42_1028 iron dependent repressor, N-terminal DNA binding domain protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D WM42_2056 iron dependent repressor, N-terminal DNA binding domain protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D WM42_0790 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D WM42_0385 helix-turn-helix family protein K07729 K07729; putative transcriptional regulator D WM42_0862 helix-turn-helix family protein K07729 K07729; putative transcriptional regulator D WM42_1312 helix-turn-helix family protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D WM42_1684 proline dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family D WM42_1708 PRD domain protein K03488 licT; beta-glucoside operon transcriptional antiterminator C Others D WM42_0679 transcription factor WhiB family protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D WM42_0712 transcription factor WhiB family protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D WM42_0891 transcription factor WhiB family protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D WM42_1161 transcription factor WhiB family protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D WM42_1873 metal-sensitive transcriptional repressor family protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D WM42_1447 parB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D WM42_1782 carD-like/TRCF domain protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D WM42_0004 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D WM42_2131 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D WM42_2192 deoR; deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator D WM42_0178 pyrR; bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D WM42_1459 hypothetical protein K07735 algH; putative transcriptional regulator D WM42_2472 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D WM42_2273 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2025 #
Classification taken and modified from TRANSFAC 7.0