+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Carlito syrichta (Philippine tarsier)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 103274014 RNMT; mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 103266422 RNGTT; mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 103252701 CDK7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 103268555 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 103274659 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 103264433 FAM103A1; RNMT-activating mini protein K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 103256165 NCBP1; nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 110594771 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
E 103276704 NCBP2; nuclear cap-binding protein subunit 2 isoform X2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 103253159 NUDT21; cleavage and polyadenylation specificity factor subunit 5 isoform X3 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 103249423 CPSF7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 103269058 CPSF6; cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 103257790 CLP1; polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 103269158 PCF11; LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein Pcf11 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 103272496 CPSF1; cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 103275560 CPSF2; cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 103273748 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 103259471 CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 103249943 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 isoform X6 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 103251967 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 103255932 WDR82; WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 103250671 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103252205 serine/threonine-protein phosphatase PP1-beta K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103251817 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103262486 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103261001 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 103262595 CSTF1; cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 103269104 CSTF2T; cleavage stimulation factor subunit 2 tau variant isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 103266036 CSTF2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 103269582 CSTF3; cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 103250073 SYMPK; symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 103253596 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' isoform X3 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 103271622 SNRPD3; small nuclear ribonucleoprotein Sm D3 isoform X1 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 110594536 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 110596444 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 103266442 SNRPE; small nuclear ribonucleoprotein E isoform X1 K11097 SNRPE; small nuclear ribonucleoprotein E
E 103249852 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 103261404 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 103261915 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 103263179 uncharacterized protein LOC103263179 K11098 SNRPF; small nuclear ribonucleoprotein F
E 103269244 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 103276912 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 103264661 SNRPG; small nuclear ribonucleoprotein G isoform X1 K11099 SNRPG; small nuclear ribonucleoprotein G
E 103262356 LSM10; U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 110594342 U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 103257764 LSM11; U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 103275560 CPSF2; cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 103273748 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 103269104 CSTF2T; cleavage stimulation factor subunit 2 tau variant isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 103266036 CSTF2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 103250073 SYMPK; symplekin K06100 SYMPK; symplekin
E 103251612 SLBP; histone RNA hairpin-binding protein isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
D DRB sensitivity inducing factor (DSIF) complex
E 103260038 SUPT4H1; transcription elongation factor SPT4 isoform X2 K15171 SUPT4H1; transcription elongation factor SPT4
E 103262339 SUPT5H; LOW QUALITY PROTEIN: transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 103264677 METTL3; N6-adenosine-methyltransferase 70 kDa subunit isoform X2 K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 103269798 METTL14; N6-adenosine-methyltransferase subunit METTL14 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 103277371 METTL4; methyltransferase-like protein 4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 103260578 METTL16; methyltransferase-like protein 16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 103276927 WTAP; pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 103271000 RBM15; putative RNA-binding protein 15 isoform X1 K13190 RBM15; RNA-binding protein 15
E 103271976 RBM15B; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 103264474 ZC3H13; zinc finger CCCH domain-containing protein 13 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 103254411 CBLL1; E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 103249690 PAPOLA; poly(A) polymerase alpha isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 103251625 PAPOLB; LOW QUALITY PROTEIN: poly(A) polymerase beta K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 103263763 PAPOLG; poly(A) polymerase gamma K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 103263047 PAPD4; poly(A) RNA polymerase GLD2 isoform X2 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 103264746 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 103250616 BARD1; BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 103261589 RBM26; RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26
E 103270222 FTO; alpha-ketoglutarate-dependent dioxygenase FTO K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 103249575 LOW QUALITY PROTEIN: RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 103252231 TARDBP; TAR DNA-binding protein 43 isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 103273411 DHX40; probable ATP-dependent RNA helicase DHX40 isoform X1 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 103276344 KIN; DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 103272935 METTL8; methyltransferase-like protein 8 isoform X1 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 103260032 METTL22; methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 103262707 FAM46B; protein FAM46B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 103265742 FAM46C; protein FAM46C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 103263273 FAM46D; protein FAM46D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 103258889 ZC3H14; zinc finger CCCH domain-containing protein 14 isoform X2 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 103249738 SRRT; serrate RNA effector molecule homolog isoform X2 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 103268451 RBM8A; RNA-binding protein 8A isoform X3 K12876 RBM8A; RNA-binding protein 8A
E 103255437 MAGOH; protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 103276272 LOW QUALITY PROTEIN: protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 103267487 protein mago nashi homolog isoform X1 K12877 MAGOH; protein mago nashi
E 103262781 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 103270145 DDX39B; spliceosome RNA helicase DDX39B isoform X1 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 103257487 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 103264796 CCDC174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 103272965 CASC3; protein CASC3 K14323 CASC3; protein CASC3
E 103270477 SAP18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 103265862 PNN; pinin K13114 PNN; pinin
E 103270259 ACIN1; apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 103252731 RNPS1; RNA-binding protein with serine-rich domain 1 isoform X2 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 103264496 SRRM1; serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 103272757 THOC1; THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1
E 103265496 THOC2; THO complex subunit 2 isoform X2 K12879 THOC2; THO complex subunit 2
E 103275985 THOC3; THO complex subunit 3 isoform X1 K12880 THOC3; THO complex subunit 3
E 103262781 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 103249212 THOC5; THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
E 103252042 THOC6; THO complex subunit 6 homolog isoform X1 K13175 THOC6; THO complex subunit 6
E 103254117 THOC7; THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 103252575 PCID2; PCI domain-containing protein 2 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 103253478 PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 110595742 SEM1; 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 103260998 ENY2; transcription and mRNA export factor ENY2 isoform X1 K11368 ENY2; enhancer of yellow 2 transcription factor
E 103254359 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 103254360 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 103267450 CETN2; centrin-2 K10840 CETN2; centrin-2
E 103256940 CETN3; centrin-3 isoform X2 K16466 CETN3; centrin-3
E 103257836 MCM3AP; germinal-center associated nuclear protein isoform X1 K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 103275365 TPR; nucleoprotein TPR isoform X1 K09291 TPR; nucleoprotein TPR
E 103256566 RAE1; mRNA export factor K14298 RAE1; mRNA export factor
E 103262035 SEC13; protein SEC13 homolog isoform X2 K14004 SEC13; protein transport protein SEC13
E 103258825 NUP37; nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 103275927 NUP85; nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 103254071 NUP43; nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 103265810 nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 103257466 NUP50; nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 103252495 NUP54; nucleoporin p54 K14308 NUP54; nuclear pore complex protein Nup54
E 103258087 NUP62; nuclear pore glycoprotein p62 isoform X1 K14306 NUP62; nuclear pore complex protein Nup62
E 103264259 NUP88; nuclear pore complex protein Nup88 isoform X2 K14318 NUP88; nuclear pore complex protein Nup88
E 103256211 NUP93; nuclear pore complex protein Nup93 isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 103276651 NUP98; nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 103250370 NUP107; nuclear pore complex protein Nup107 isoform X1 K14301 NUP107; nuclear pore complex protein Nup107
E 103252517 NUP133; nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 103250020 NUP188; nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188
E 103261036 NUP153; nuclear pore complex protein Nup153 isoform X2 K14296 NUP153; nuclear pore complex protein Nup153
E 103257165 LOW QUALITY PROTEIN: nuclear pore complex protein Nup153-like K14296 NUP153; nuclear pore complex protein Nup153
E 103264659 NUP155; nuclear pore complex protein Nup155 isoform X1 K14312 NUP155; nuclear pore complex protein Nup155
E 103276373 NUP160; nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 103268878 NUP35; nucleoporin NUP53 K14313 NUP35; nuclear pore complex protein Nup53
E 103255074 NUP205; nuclear pore complex protein Nup205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 103262874 NUP210L; nuclear pore membrane glycoprotein 210-like isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 103259781 NUP214; nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214
E 103249850 POM121; nuclear envelope pore membrane protein POM 121 K14316 POM121; nuclear pore complex protein Nup121
E 103272875 LOW QUALITY PROTEIN: nuclear envelope pore membrane protein POM 121C-like K14316 POM121; nuclear pore complex protein Nup121
E 103260522 NUP58; nucleoporin p58/p45 K14307 NUPL1; nucleoporin p58/p45
E 103268606 NUPL2; nucleoporin-like protein 2 K14321 NUPL2; nucleoporin-like protein 2
E 103276815 NDC1; nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 103261292 SEH1L; nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1
E 103264213 E3 SUMO-protein ligase RanBP2 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 103268748 SENP2; sentrin-specific protease 2 isoform X3 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 103250914 AAAS; aladin isoform X1 K14320 AAAS; aladin
E 103256940 CETN3; centrin-3 isoform X2 K16466 CETN3; centrin-3
E 103262982 GLE1; nucleoporin GLE1 K18723 GLE1; nucleoporin GLE1
E 103263289 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 103254730 NXF3; LOW QUALITY PROTEIN: nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
E 103255629 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 103274121 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 103262385 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
E 103275591 NXT2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 103271889 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 103252908 ANP32A; acidic leucine-rich nuclear phosphoprotein 32 family member A K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 103273475 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 103264626 TNFSF13; tumor necrosis factor ligand superfamily member 13 isoform X1 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 103255530 ELAVL1; ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 103251962 ELAVL2; ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 103252016 ELAVL3; ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 103256287 ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 103272196 FAF2; FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2
E 103256896 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 103276424 VCPKMT; protein-lysine methyltransferase METTL21D isoform X1 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 103250452 TNPO2; transportin-2 isoform X1 K18727 TNPO2; transportin-2
E 103257684 XPO1; exportin-1 K14290 XPO1; exportin-1
E 103273550 XPO7; exportin-7 isoform X2 K18460 XPO7; exportin-7
E 103263472 RANBP17; ran-binding protein 17 K24115 RANBP17; Ran-binding protein 17
E 103267992 RANGAP1; ran GTPase-activating protein 1 isoform X2 K14319 RANGAP1; Ran GTPase-activating protein 1
E 103265811 TATA-binding protein-associated factor 2N isoform X1 K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 103249523 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 103270915 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 103253902 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X2 K03259 EIF4E; translation initiation factor 4E
E 103264628 EIF4A1; eukaryotic initiation factor 4A-I isoform X1 K03257 EIF4A; translation initiation factor 4A
E 103258703 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 103254800 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 103271794 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 103265073 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 103269722 EIF4B; eukaryotic translation initiation factor 4B isoform X2 K03258 EIF4B; translation initiation factor 4B
E 103274459 EIF4H; eukaryotic translation initiation factor 4H K24086 EIF4H; translation initiation factor 4H
E 103260204 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 103258467 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 103264785 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 103256376 ANGEL1; protein angel homolog 1 isoform X1 K18729 ANGEL; protein angel
E 103257425 ANGEL2; protein angel homolog 2 isoform X1 K18729 ANGEL; protein angel
E 103271862 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 103254204 FMR1; synaptic functional regulator FMR1 isoform X2 K15516 FMR; fragile X mental retardation protein
E 103264636 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 103274640 CYFIP1; cytoplasmic FMR1-interacting protein 1 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 103257756 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X4 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 103275327 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 103251610 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 103269788 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103264427 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103264510 cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103265633 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103262174 ATP-dependent RNA helicase DDX3X-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 103267796 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 103255675 GIGYF1; GRB10-interacting GYF protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 103267531 GIGYF2; GRB10-interacting GYF protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 103263797 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 103269339 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 103253320 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 103261345 PABPC1; polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 103256517 PABPC4; polyadenylate-binding protein 4 K13126 PABPC; polyadenylate-binding protein
E 103272117 PAIP1; polyadenylate-binding protein-interacting protein 1 isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 103257191 PAIP2; polyadenylate-binding protein-interacting protein 2 isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 103261149 PAIP2B; polyadenylate-binding protein-interacting protein 2B K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 103271299 SKIV2L; helicase SKI2W isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 103260433 malignant T-cell-amplified sequence 1-like K07575 MCTS; malignant T-cell-amplified sequence
E 103275210 MCTS1; malignant T-cell-amplified sequence 1 isoform X1 K07575 MCTS; malignant T-cell-amplified sequence
E 103251775 DENR; density-regulated protein isoform X1 K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 103265738 APOBEC1; LOW QUALITY PROTEIN: C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 103273218 A1CF; APOBEC1 complementation factor K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 103266421 PYM1; partner of Y14 and mago isoform X2 K14294 WIBG; partner of Y14 and mago
E 103250639 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103262914 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103263187 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103260769 heterogeneous nuclear ribonucleoprotein A3-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103258069 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103258348 heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103271807 MSI1; RNA-binding protein Musashi homolog 1 K14411 MSI; RNA-binding protein Musashi
E 103263155 DAZAP1; DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 103260409 RNA-binding protein Musashi homolog 2 K14411 MSI; RNA-binding protein Musashi
E 103259281 HBS1L; HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 103254448 PELO; protein pelota homolog K06965 PELO; protein pelota
E 103270251 PABPN1; polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 103271446 ATP-dependent RNA helicase DDX19A-like K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 103265654 DDX19B; ATP-dependent RNA helicase DDX19B isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 103270554 DDX25; ATP-dependent RNA helicase DDX25 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 103252247 XAB2; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 103269528 RCC1; regulator of chromosome condensation isoform X1 K11493 RCC1; regulator of chromosome condensation
E 103263305 LARP6; la-related protein 6 K18733 LARP6; la-related protein 6
E 103258459 PURA; transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
E 103269291 PURB; transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 103265980 POLDIP3; polymerase delta-interacting protein 3 isoform X1 K22414 POLDIP3; polymerase delta-interacting protein 3
E 103266444 ZC3H11A; zinc finger CCCH domain-containing protein 11A isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 103269329 LENG8; leukocyte receptor cluster member 8 K23802 LENG8; SAC3 family protein LENG8/THP3
E 103272142 PATL2; protein PAT1 homolog 2 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 103258761 ETF1; eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 103263532 GSPT2; eukaryotic peptide chain release factor GTP-binding subunit ERF3B isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 103268644 GSPT1; eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 103249421 UPF1; regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 103267161 UPF2; regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 103256639 LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A-like K14328 UPF3; regulator of nonsense transcripts 3
E 103276209 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 103261468 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform isoform X2 K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 103268313 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 103256338 PPP2R1B; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X3 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 103258353 PPP2R1A; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 103254381 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 103252361 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 103263175 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 103262435 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 103273997 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 103259194 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 103266449 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X2 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 103275607 PPP2R5B; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 103276158 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 103268163 PPP2R5E; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 103268546 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 103251523 SMG1; serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 103261519 SMG5; protein SMG5 isoform X1 K11125 SMG5; protein SMG5
E 103260576 SMG6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 103276968 SMG7; protein SMG7 isoform X2 K14409 SMG7; protein SMG7
E 103270757 SMG8; protein SMG8 K18734 SMG8; protein SMG8
E 103271553 SMG9; protein SMG9 K18735 SMG9; protein SMG9
E 103255675 GIGYF1; GRB10-interacting GYF protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 103267531 GIGYF2; GRB10-interacting GYF protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 103250696 SECISBP2; selenocysteine insertion sequence-binding protein 2 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 103272386 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 103251079 DHX34; probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 103271265 GTPBP1; GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 103271594 PUM3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
E 103261836 unconventional myosin-Va K10357 MYO5; myosin V
E 103266900 MYO5B; unconventional myosin-Vb K10357 MYO5; myosin V
E 103275174 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 103250588 BICD2; protein bicaudal D homolog 2 K18739 BICD; protein bicaudal D
E 103276337 BICD1; protein bicaudal D homolog 1 isoform X1 K18739 BICD; protein bicaudal D
E 103251802 LOW QUALITY PROTEIN: piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 103250241 ACTG1; actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 103258260 actin-like isoform X1 K05692 ACTB_G1; actin beta/gamma 1
E 103252825 actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 103263822 actin, cytoplasmic 1-like isoform X1 K05692 ACTB_G1; actin beta/gamma 1
E 103263126 MBP; myelin basic protein K17269 MBP; myelin basic protein
E 103262495 vimentin isoform X1 K07606 VIM; vimentin
E 103258679 VIM; vimentin isoform X1 K07606 VIM; vimentin
E 103256212 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103256215 metallothionein-1-like K14739 MT1_2; metallothionein 1/2
E 103270318 metallothionein-I, hippocampal-like K14739 MT1_2; metallothionein 1/2
E 110594993 metallothionein-2E-like K14739 MT1_2; metallothionein 1/2
E 110594994 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103253161 metallothionein-2 K14739 MT1_2; metallothionein 1/2
E 103253162 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103253163 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103253164 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103253165 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103253166 metallothionein-2 K14739 MT1_2; metallothionein 1/2
E 103253167 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103261465 MT1HL1; metallothionein 1H-like protein 1 K14739 MT1_2; metallothionein 1/2
E 103253726 metallothionein-I, hippocampal-like K14739 MT1_2; metallothionein 1/2
E 103274009 metallothionein-1L-like K14739 MT1_2; metallothionein 1/2
E 103256106 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103256213 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 103256216 metallothionein-I, hippocampal-like K14739 MT1_2; metallothionein 1/2
E 103264057 MYC; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 103274192 TBX6; T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
D Trans-acting binding proteins
E 103256572 ZBP1; Z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 103255209 FUBP1; far upstream element-binding protein 1 isoform X1 K13210 FUBP; far upstream element-binding protein
E 103252380 KHSRP; far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein
E 103263824 FUBP3; far upstream element-binding protein 3 K13210 FUBP; far upstream element-binding protein
E 103263473 EEF1A1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 103277356 EEF1A2; elongation factor 1-alpha 2 isoform X1 K03231 EEF1A; elongation factor 1-alpha
E 103264747 EEF1G; elongation factor 1-gamma isoform X1 K03233 EEF1G; elongation factor 1-gamma
E 103268506 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 103265132 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 103250673 HCLS1-associated protein X-1 isoform X1 K16220 HAX1; HCLS1-associated protein X-1
E 103262880 HAX1; HCLS1-associated protein X-1 isoform X2 K16220 HAX1; HCLS1-associated protein X-1
E 103256512 arf-GAP domain and FG repeat-containing protein 1-like K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 103256674 LOW QUALITY PROTEIN: arf-GAP domain and FG repeat-containing protein 1-like K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 103276795 AGFG1; arf-GAP domain and FG repeat-containing protein 1 isoform X3 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 103261423 LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 2-like K17597 STAU; double-stranded RNA-binding protein Staufen
E 103254305 double-stranded RNA-binding protein Staufen homolog 2-like K17597 STAU; double-stranded RNA-binding protein Staufen
E 103264293 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 103268602 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 isoform X1 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 103270472 polypyrimidine tract-binding protein 1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 103269788 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103264427 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103264510 cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103265633 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 103271862 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 103254204 FMR1; synaptic functional regulator FMR1 isoform X2 K15516 FMR; fragile X mental retardation protein
E 103264636 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 103274640 CYFIP1; cytoplasmic FMR1-interacting protein 1 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 103257756 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X4 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 103251678 PCBP2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 103260138 PCBP4; poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 103262652 poly(rC)-binding protein 3 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 103266159 CAPRIN1; caprin-1 K18743 CAPRIN1; caprin-1
E 103268259 CAPRIN2; caprin-2 isoform X2 K18744 CAPRIN2; caprin-2
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 103269737 XRN1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 103271693 AGO1; protein argonaute-1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 103271695 AGO4; protein argonaute-4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 103271707 protein argonaute-3 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 103276616 AGO2; protein argonaute-2 isoform X2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 103249523 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 103270915 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 103253902 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X2 K03259 EIF4E; translation initiation factor 4E
E 103249421 UPF1; regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 103262174 ATP-dependent RNA helicase DDX3X-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 103267796 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 103265205 DDX6; probable ATP-dependent RNA helicase DDX6 isoform X1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 103249856 MEX3A; RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 103250168 RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 103274622 MEX3B; RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 103275287 FASTK; fas-activated serine/threonine kinase K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 103272014 LSM14A; protein LSM14 homolog A K18749 LSM14; protein LSM14
E 103259772 LSM14B; protein LSM14 homolog B isoform X4 K18749 LSM14; protein LSM14
E 103264668 PCBP1; poly(rC)-binding protein 1 isoform X1 K12889 PCBP1; poly(rC)-binding protein 1
E 103251678 PCBP2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 103273931 LIMD1; LIM domain-containing protein 1 K16682 AJUBA; LIM domain-containing protein
E 103270271 AJUBA; LIM domain-containing protein ajuba K16682 AJUBA; LIM domain-containing protein
E 103265738 APOBEC1; LOW QUALITY PROTEIN: C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 103250986 DNA dC->dU-editing enzyme APOBEC-3C-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 103250987 DNA dC->dU-editing enzyme APOBEC-3F-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 103250989 DNA dC->dU-editing enzyme APOBEC-3G-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 103257112 MOV10; putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 103264484 PNRC2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 103258766 TNPO1; transportin-1 K18752 TNPO1; transportin-1
E 103251523 SMG1; serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 103261519 SMG5; protein SMG5 isoform X1 K11125 SMG5; protein SMG5
E 103260576 SMG6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 103276968 SMG7; protein SMG7 isoform X2 K14409 SMG7; protein SMG7
E 103252685 ZFP36L1; mRNA decay activator protein ZFP36L1 K18753 ZFP36L; butyrate response factor
E 103269476 LIN28B; protein lin-28 homolog B isoform X2 K18754 LIN28; protein lin-28
E 103275645 LIN28A; protein lin-28 homolog A K18754 LIN28; protein lin-28
E 103258066 HTT; huntingtin K04533 HD; huntingtin
E 103268260 IPO8; importin-8 isoform X1 K18755 IPO8; importin-8
E 103264028 BICC1; protein bicaudal C homolog 1 K18756 BICC1; protein bicaudal C
E 103250639 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103262914 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103263187 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103260769 heterogeneous nuclear ribonucleoprotein A3-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103258069 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103258348 heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103253311 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X2 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 103266092 PRKACA; cAMP-dependent protein kinase catalytic subunit alpha K04345 PKA; protein kinase A [EC:2.7.11.11]
E 103275361 LARP1; la-related protein 1 K18757 LARP1; la-related protein 1
E 103252086 ATXN2L; ataxin-2-like protein K23625 ATXN2_2L; ataxin 2/2L
E 103264684 ATXN2; ataxin-2 isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 103258989 DCP2; m7GpppN-mRNA hydrolase isoform X3 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 103251624 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 103262224 DCP1B; mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 103274950 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 103258635 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 103273174 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 103249522 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 103259273 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 110595208 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 103255282 LSM6; U6 snRNA-associated Sm-like protein LSm6 isoform X2 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 103250950 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 103267959 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 103249209 KLC3; kinesin light chain 3 K10407 KLC; kinesin light chain
E 103249378 KLC2; kinesin light chain 2 isoform X1 K10407 KLC; kinesin light chain
E 103268540 KLC4; kinesin light chain 4 isoform X1 K10407 KLC; kinesin light chain
E 103261836 unconventional myosin-Va K10357 MYO5; myosin V
E 103266900 MYO5B; unconventional myosin-Vb K10357 MYO5; myosin V
E 103275174 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 103261248 TUBA4A; tubulin alpha-4A chain isoform X1 K07374 TUBA; tubulin alpha
E 103261588 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha
E 103262680 TUBA8; tubulin alpha-8 chain K07374 TUBA; tubulin alpha
E 103271714 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 103253635 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha
E 103261884 TUBAL3; tubulin alpha chain-like 3 K07374 TUBA; tubulin alpha
E 103273447 TUBA1B; tubulin alpha-1B chain isoform X1 K07374 TUBA; tubulin alpha
E 103271353 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 103269788 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103264427 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103264510 cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103265633 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103275327 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 103251610 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 103262810 TNRC6C; trinucleotide repeat-containing gene 6C protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 103273018 TNRC6A; trinucleotide repeat-containing gene 6A protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 103276695 TNRC6B; trinucleotide repeat-containing gene 6B protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 103270488 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 103269038 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 103276460 CNOT3; CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 103255774 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 103270528 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 103254966 CNOT6; CCR4-NOT transcription complex subunit 6 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 103263533 CNOT7; CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 103275318 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 103269856 uncharacterized protein KIAA0355 homolog K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 103253903 DIS3L2; DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 103272715 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 103264983 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 103249768 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 103262812 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 103263149 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 103256135 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 103275432 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 103264785 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 103274396 PATL1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 103271645 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 103268209 EDC4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 103250077 NANOS2; nanos homolog 2 K18760 NANOS2; protein nanos 2
E 103252688 NANOS3; nanos homolog 3 K18761 NANOS3; protein nanos 3
E 103267161 UPF2; regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 103256639 LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A-like K14328 UPF3; regulator of nonsense transcripts 3
E 103276209 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 103256624 TRIM21; E3 ubiquitin-protein ligase TRIM21 K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 103272684 TRIM71; E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 103255632 POLR2G; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 103271654 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1 K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 103255383 interferon-induced, double-stranded RNA-activated protein kinase-like K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 103271660 interferon-induced, double-stranded RNA-activated protein kinase-like K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 103271661 interferon-induced, double-stranded RNA-activated protein kinase-like K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 103267330 ZAR1L; LOW QUALITY PROTEIN: ZAR1-like protein K18762 ZAR1; zygote arrest protein 1
E 103266467 YTHDF2; YTH domain-containing family protein 2 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 103277290 YTHDF1; YTH domain-containing family protein 1 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 103275354 YTHDF3; YTH domain-containing family protein 3 isoform X1 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 103264663 TIA1; nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 103275861 TIAL1; nucleolysin TIAR isoform X2 K13201 TIA1; nucleolysin TIA-1/TIAR
E 103263797 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 103269339 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 103253320 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 103261345 PABPC1; polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 103256517 PABPC4; polyadenylate-binding protein 4 K13126 PABPC; polyadenylate-binding protein
E 103261423 LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 2-like K17597 STAU; double-stranded RNA-binding protein Staufen
E 103254305 double-stranded RNA-binding protein Staufen homolog 2-like K17597 STAU; double-stranded RNA-binding protein Staufen
E 103264293 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 103271862 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 103254204 FMR1; synaptic functional regulator FMR1 isoform X2 K15516 FMR; fragile X mental retardation protein
E 103264636 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 103256572 ZBP1; Z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 103255530 ELAVL1; ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 103250961 G3BP1; ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 103271581 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 103272266 EIF2A; eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 103251893 EIF3B; eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 103264628 EIF4A1; eukaryotic initiation factor 4A-I isoform X1 K03257 EIF4A; translation initiation factor 4A
E 103258703 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 103257487 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 103269722 EIF4B; eukaryotic translation initiation factor 4B isoform X2 K03258 EIF4B; translation initiation factor 4B
E 103254800 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 103271794 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 103265073 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 103260173 RPS6KA2; ribosomal protein S6 kinase alpha-2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 103265703 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 103275091 RPS6KA6; ribosomal protein S6 kinase alpha-6 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 103275641 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 103256196 LOW QUALITY PROTEIN: receptor of activated protein C kinase 1-like K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 103267945 receptor of activated protein C kinase 1-like K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 103252426 TRAF2; TNF receptor-associated factor 2 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 103263289 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 103254730 NXF3; LOW QUALITY PROTEIN: nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
E 103255629 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 103274121 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 103268713 HDAC6; histone deacetylase 6 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 103261694 TDRD3; LOW QUALITY PROTEIN: tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3
E 103255084 LARP4B; la-related protein 4B K18763 LARP4; la-related protein 4
E 103276682 LARP4; la-related protein 4 isoform X1 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 103251624 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 103262224 DCP1B; mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 103258989 DCP2; m7GpppN-mRNA hydrolase isoform X3 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 103265205 DDX6; probable ATP-dependent RNA helicase DDX6 isoform X1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 103271645 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 103268209 EDC4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 103274396 PATL1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 103274950 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 103258635 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 103273174 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 103249522 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 103259273 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 110595208 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 103255282 LSM6; U6 snRNA-associated Sm-like protein LSm6 isoform X2 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 103250950 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 103267959 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 103269737 XRN1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 103266936 XRN2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D Other 5'-3' decay factors
E 103270563 DCPS; m7GpppX diphosphatase isoform X1 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 103268296 HELZ; probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 103264841 EXOSC1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
E 103258966 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 103276721 EXOSC3; exosome complex component RRP40 isoform X1 K03681 RRP40; exosome complex component RRP40
E 103272507 EXOSC4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 103261181 EXOSC5; exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 103273935 EXOSC7; exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42
E 103250324 EXOSC8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 103270887 EXOSC9; exosome complex component RRP45 isoform X2 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 103258279 DIS3; exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 103260826 DIS3L; DIS3-like exonuclease 1 isoform X1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 103272292 EXOSC10; exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 103256029 C1D; nuclear nucleic acid-binding protein C1D isoform X1 K12592 C1D; exosome complex protein LRP1
E 103267841 MPHOSPH6; M-phase phosphoprotein 6 isoform X2 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 103270193 DDX60L; probable ATP-dependent RNA helicase DDX60-like K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 103270194 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 103259332 PAPD5; non-canonical poly(A) RNA polymerase PAPD5 isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 103268863 PAPD7; non-canonical poly(A) RNA polymerase PAPD7 isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 103276729 ZCCHC7; zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
E 103268237 SKIV2L2; superkiller viralicidic activity 2-like 2 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 103271299 SKIV2L; helicase SKI2W isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 103252038 TTC37; tetratricopeptide repeat protein 37 isoform X1 K12600 SKI3; superkiller protein 3
E 103256455 WDR61; WD repeat-containing protein 61 isoform X1 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 103270528 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 103254966 CNOT6; CCR4-NOT transcription complex subunit 6 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 103270488 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 103269038 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 103276460 CNOT3; CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 103255774 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 103263533 CNOT7; CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 103275318 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 103261228 CNOT9; CCR4-NOT transcription complex subunit 9 isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 103251145 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 103272715 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 103264983 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 103257700 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 103267256 PARN; poly(A)-specific ribonuclease PARN isoform X2 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 103276931 PNLDC1; poly(A)-specific ribonuclease PNLDC1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 103268382 DHX36; ATP-dependent RNA helicase DHX36 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 103249768 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 103262812 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 103263149 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 103256135 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 103275432 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 103270135 CSF2; granulocyte-macrophage colony-stimulating factor K05427 CSF2; granulocyte-macrophage colony-stimulating factor
E 103255271 NOCT; nocturnin K18764 NOCT; nocturnin [EC:3.1.3.108]
E 103252952 ERI1; 3'-5' exoribonuclease 1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 103263528 ERI2; ERI1 exoribonuclease 2 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 103270563 DCPS; m7GpppX diphosphatase isoform X1 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 103272570 PDE12; 2',5'-phosphodiesterase 12 isoform X1 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 103256458 IREB2; iron-responsive element-binding protein 2 isoform X1 K22416 IREB2; iron-responsive element-binding protein 2
E 103268296 HELZ; probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 103277327 HELZ2; LOW QUALITY PROTEIN: helicase with zinc finger domain 2 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 103252812 NRDE2; protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 103250818 SAMD4A; protein Smaug homolog 1 K27396 SMG; protein Smaug
E 103259928 SAMD4B; protein Smaug homolog 2 K27396 SMG; protein Smaug
E 103260914 FOCAD; focadhesin K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 110595498 non-secretory ribonuclease-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 103256741 RNASE1; ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 103258822 non-secretory ribonuclease-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 103259253 RNASE4; ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 103253147 ribonuclease 7-like K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 103256752 RNASE6; ribonuclease K6 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 103267264 ribonuclease 7 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 103258810 ribonuclease 8-like K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 103259252 ribonuclease 7-like K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 103268343 LOW QUALITY PROTEIN: ribonuclease 7-like K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 103267259 RNASE11; LOW QUALITY PROTEIN: probable ribonuclease 11 K16633 RNASE11; ribonuclease 11 [EC:3.1.27.-]
E 103258884 ZC3H12C; probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 103253564 ZC3H12B; probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 103255480 ZC3H12A; endoribonuclease ZC3H12A isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 103249325 REXO2; oligoribonuclease, mitochondrial isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-]
E 103255112 LOW QUALITY PROTEIN: oligoribonuclease, mitochondrial-like K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 103251239 gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 103271486 ENO1; alpha-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 103275756 LOW QUALITY PROTEIN: alpha-enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 103268364 ENO3; beta-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 103269642 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 103271763 PFKM; ATP-dependent 6-phosphofructokinase, muscle type isoform X2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 103254767 PFKP; ATP-dependent 6-phosphofructokinase, platelet type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 103258747 PFKL; ATP-dependent 6-phosphofructokinase, liver type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 103258759 HSPA9; stress-70 protein, mitochondrial isoform X1 K04043 dnaK; molecular chaperone DnaK
E 103265412 HSPD1; 60 kDa heat shock protein, mitochondrial isoform X1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 103258966 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 103264841 EXOSC1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 103272507 EXOSC4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 103273935 EXOSC7; exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024