+D GENES KO #

  KEGG Orthology (KO) - Corynebacterium testudinoris

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cted00010] D CTEST_11465 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_09045 glkA; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_03650 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTEST_05550 pfkA; phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CTEST_04425 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTEST_11955 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTEST_07095 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTEST_04130 gapB; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTEST_07105 gap; glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTEST_07100 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTEST_01570 gpmA; phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTEST_04245 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTEST_08650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTEST_12515 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTEST_09360 aceE; pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CTEST_09140 aceF; 2-oxoglutarate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_12565 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_01515 malate/lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_12015 adh; Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CTEST_12095 aldA; NAD-dependent aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CTEST_11005 celB; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTEST_07635 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CTEST_09745 aldose 1-epimerase-like enzyme K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D CTEST_12305 pckG; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CTEST_10680 abgA; beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CTEST_11730 bglA; beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CTEST_05410 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_11505 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_05400 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_05395 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:cted00020] D CTEST_03550 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CTEST_13030 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CTEST_06930 acn; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CTEST_02655 icd; isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CTEST_04960 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_11140 cat1; succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CTEST_01460 sdhA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTEST_01465 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTEST_01455 succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CTEST_04420 fumC; fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CTEST_09965 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTEST_08180 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CTEST_02790 Pc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CTEST_12305 pckG; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CTEST_09360 aceE; pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CTEST_09140 aceF; 2-oxoglutarate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cted00030] D CTEST_03650 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTEST_07065 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTEST_07075 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CTEST_06435 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CTEST_07155 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CTEST_07055 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CTEST_07060 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CTEST_10330 rpiB; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CTEST_08510 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CTEST_01490 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CTEST_09725 sugar kinase, ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CTEST_11005 celB; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTEST_04165 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CTEST_11955 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTEST_04425 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTEST_05550 pfkA; phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cted00040] D CTEST_12230 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CTEST_03820 gtaB; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTEST_07155 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cted00051] D CTEST_03120 manA; mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CTEST_08505 pmmB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTEST_03110 pmmA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTEST_03090 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CTEST_05550 pfkA; phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CTEST_04425 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTEST_07760 hexose kinase, 1-phosphofructokinase family K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CTEST_11955 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTEST_07095 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTEST_10330 rpiB; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CTEST_07765 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CTEST_05990 haloacid dehalogenase superfamily enzyme, subfamily IA K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] C 00052 Galactose metabolism [PATH:cted00052] D CTEST_09295 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CTEST_01375 galE1; nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTEST_07690 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTEST_03820 gtaB; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTEST_11005 celB; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTEST_11465 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_09045 glkA; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_12435 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CTEST_05550 pfkA; phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CTEST_04900 beta-fructosidase, levanase/invertase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CTEST_11550 beta-fructosidase, levanase/invertase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] C 00053 Ascorbate and aldarate metabolism D CTEST_12230 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:cted00500] D CTEST_11560 scrA; PTS system sucrose-specific EIIBCA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CTEST_04900 beta-fructosidase, levanase/invertase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CTEST_11550 beta-fructosidase, levanase/invertase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CTEST_03820 gtaB; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTEST_10680 abgA; beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CTEST_11730 bglA; beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CTEST_04910 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CTEST_05415 glgB; alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CTEST_08645 glgP; glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CTEST_09650 treS; trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D CTEST_04380 glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D CTEST_09595 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CTEST_09655 hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175] D CTEST_05420 glgE; alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D CTEST_04905 glgA; glycogen synthase (ADP-glucose) K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CTEST_05410 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_11505 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_05400 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_08750 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D CTEST_08770 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D CTEST_08800 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D CTEST_11415 otsA; Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CTEST_11425 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D CTEST_01880 treA; glycosidase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D CTEST_11005 celB; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTEST_11465 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_09045 glkA; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_03650 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cted00520] D CTEST_12260 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CTEST_05410 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_11505 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_05400 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_11510 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CTEST_11455 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CTEST_11450 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CTEST_02390 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTEST_02365 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CTEST_04170 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CTEST_11050 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTEST_01510 murB2; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTEST_11470 nanE; putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D CTEST_05395 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CTEST_11465 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_09045 glkA; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_07635 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CTEST_11005 celB; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTEST_03820 gtaB; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTEST_12230 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CTEST_09295 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CTEST_01375 galE1; nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTEST_07690 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTEST_12435 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CTEST_03650 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTEST_03120 manA; mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CTEST_08505 pmmB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTEST_03110 pmmA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTEST_03090 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CTEST_04910 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cted00620] D CTEST_09360 aceE; pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CTEST_09140 aceF; 2-oxoglutarate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_06485 pflB; pyruvate-formate lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CTEST_12015 adh; Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CTEST_11910 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CTEST_11915 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTEST_08650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTEST_12515 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTEST_02500 Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_02810 acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_08575 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CTEST_12095 aldA; NAD-dependent aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CTEST_11140 cat1; succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CTEST_12565 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_01515 malate/lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_11365 poxB; thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D CTEST_06500 FAD/FMN-dependent dehydrogenase K18930 dld; D-lactate dehydrogenase D CTEST_07375 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CTEST_10555 malS; malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CTEST_03560 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CTEST_02790 Pc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CTEST_09965 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTEST_08180 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CTEST_04420 fumC; fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CTEST_07090 ppc; Phosphoenolpyruvate carboxylase, type 1 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CTEST_12305 pckG; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CTEST_04030 glcB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_01040 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cted00630] D CTEST_04035 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D CTEST_04030 glcB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D CTEST_09965 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTEST_03550 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CTEST_13030 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CTEST_06930 acn; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_02500 Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_02810 acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_02845 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CTEST_02850 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CTEST_02840 Acyl-CoA carboxylase epsilon subunit K27095 accE5; acyl-CoA carboxylase epsilon subunit D CTEST_01090 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D CTEST_09325 nt5e; putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CTEST_09185 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_09275 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_04360 glyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTEST_09145 gcvP; glycine dehydrogenase, decarboxylating K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CTEST_09150 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_09155 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CTEST_08620 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTEST_10325 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTEST_04960 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CTEST_04620 Molybdopterin oxidoreductase Fe4S4 domain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CTEST_04625 fdnG2; molybdopterin dinucleotide binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CTEST_04630 Fe-S-cluster-containing hydrogenase subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CTEST_10720 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:cted00640] D CTEST_11910 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CTEST_11915 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_06485 pflB; pyruvate-formate lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CTEST_12920 acuI; putative quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D CTEST_02500 Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_02810 acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_03990 gabT; 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CTEST_02845 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CTEST_02850 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CTEST_02840 Acyl-CoA carboxylase epsilon subunit K27095 accE5; acyl-CoA carboxylase epsilon subunit D CTEST_03710 iolA; methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CTEST_02785 prpC2; 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D CTEST_02775 prpD2; 2-methylcitrate dehydratase 2 K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D CTEST_02780 prpB2; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D CTEST_12565 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_01515 malate/lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:cted00650] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_12870 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CTEST_12865 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CTEST_01460 sdhA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTEST_01465 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTEST_01455 succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CTEST_03990 gabT; 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CTEST_00355 gabD2; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03970 ssdA; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03985 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03170 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_11140 cat1; succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CTEST_06485 pflB; pyruvate-formate lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CTEST_00250 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CTEST_09985 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CTEST_00255 lpsJ; 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CTEST_09980 scoB; 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CTEST_00245 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D CTEST_05625 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CTEST_05630 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:cted00660] D CTEST_05625 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CTEST_05630 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CTEST_05850 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CTEST_05855 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CTEST_05740 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cted00562] D CTEST_08680 impA; inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CTEST_07630 suhB; inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CTEST_12775 ino1; inositol 1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CTEST_07490 pgsA1; phosphatidylglycerophosphate synthase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D CTEST_10670 putative dehydrogenase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] D CTEST_03710 iolA; methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CTEST_07095 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cted00190] D CTEST_06490 NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CTEST_01460 sdhA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTEST_01465 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTEST_01455 succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CTEST_09070 qcrA; Rieske Fe-S protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CTEST_09065 qcrB; cytochrome b subunit of the bc complex K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D CTEST_09075 qcrC; cytochrome c, mono- and diheme variants family K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D CTEST_07050 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CTEST_09085 ctaF; Cytochrome c oxidase subunit IV K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D CTEST_09080 ctaE; heme/copper-type cytochrome/quinol oxidase, subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D CTEST_10800 ctaD; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CTEST_09090 ctaC; heme/copper-type cytochrome/quinol oxidases, subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D CTEST_07040 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CTEST_05355 atpA; ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CTEST_05365 atpD; ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CTEST_05360 atpG; ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CTEST_05350 atpH; ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CTEST_05370 atpC; ATP synthase, F1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CTEST_05335 atpB; F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CTEST_05345 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CTEST_05340 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CTEST_11720 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CTEST_04005 ppk2A; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CTEST_11760 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:cted00710] D CTEST_07100 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTEST_04130 gapB; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTEST_07105 gap; glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTEST_11955 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTEST_04425 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTEST_07055 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CTEST_10330 rpiB; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CTEST_07095 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTEST_07155 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CTEST_07060 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CTEST_07090 ppc; Phosphoenolpyruvate carboxylase, type 1 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CTEST_09965 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:cted00720] D CTEST_07090 ppc; Phosphoenolpyruvate carboxylase, type 1 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CTEST_02790 Pc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CTEST_09965 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTEST_04420 fumC; fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CTEST_01460 sdhA; succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTEST_01465 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTEST_01455 succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_02655 icd; isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CTEST_13030 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CTEST_06930 acn; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CTEST_06655 fhs; Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CTEST_02615 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CTEST_00155 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CTEST_11915 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTEST_11910 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:cted00680] D CTEST_04620 Molybdopterin oxidoreductase Fe4S4 domain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CTEST_04625 fdnG2; molybdopterin dinucleotide binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CTEST_04630 Fe-S-cluster-containing hydrogenase subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CTEST_04360 glyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTEST_04245 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTEST_07090 ppc; Phosphoenolpyruvate carboxylase, type 1 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CTEST_09965 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTEST_11955 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTEST_04425 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTEST_05550 pfkA; phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CTEST_11910 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CTEST_11915 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTEST_01570 gpmA; phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTEST_05665 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CTEST_03545 serC; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CTEST_10795 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:cted00910] D CTEST_05245 narK; nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CTEST_05655 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CTEST_05650 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15577 nrtB; nitrate/nitrite transport system permease protein D CTEST_05645 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CTEST_05240 narG; respiratory nitrate reductase alpha subunit apoprotein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CTEST_05235 narH; respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CTEST_05225 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CTEST_05275 putative multicopper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D CTEST_04125 2-nitropropane dioxygenase-like enzyme K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CTEST_04090 gdhA; glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CTEST_08615 gdh; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CTEST_09185 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_09275 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_00705 gltB; glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CTEST_00710 gltD; NADH/NADPH-dependent glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CTEST_06790 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D CTEST_11580 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cted00920] D CTEST_07360 LLM-partnered FMN reductase, CE1759 family K00299 ssuE; FMN reductase [EC:1.5.1.38] D CTEST_12155 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CTEST_12160 mmcV; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CTEST_03615 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CTEST_08055 exopolyphosphatase-like enzyme K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D CTEST_12165 cysH; phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CTEST_12175 sir2; sulfite reductase, beta subunit (hemoprotein) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D CTEST_11990 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_06290 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_02815 thtR; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_11065 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CTEST_11060 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CTEST_02645 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CTEST_10395 metB; cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cted00061] D CTEST_02500 Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_02810 acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_09385 acyl carrier protein K02078 acpP; acyl carrier protein D CTEST_10665 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CTEST_01520 3-oxoacyl-(acyl-carrier protein) reductase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CTEST_01535 fadD2; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_09590 fadD15; AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cted00071] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_01535 fadD2; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_09590 fadD15; AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_12015 adh; Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cted00561] D CTEST_08620 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTEST_10325 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTEST_12445 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CTEST_06205 putative sugar phosphatase of HAD superfamily K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D CTEST_09040 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTEST_06335 sphingosine/diacylglycerol kinase-like enzyme K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CTEST_12385 putative esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CTEST_00375 putative acetyltransferase/hydrolase with alpha/beta hydrolase fold K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:cted00564] D CTEST_05865 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CTEST_09040 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTEST_02080 cytidyltransferase-related enzyme K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D CTEST_06335 sphingosine/diacylglycerol kinase-like enzyme K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CTEST_12510 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CTEST_08245 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CTEST_07910 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CTEST_11865 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:cted00600] D CTEST_12930 nanI; Concanavalin A-like lectin/glucanases superfamily/BNR repeat-like domain K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:cted01040] D CTEST_03195 desA3; fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D CTEST_03190 flavodoxin reductase family protein K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D CTEST_07455 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cted00230] D CTEST_11005 celB; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTEST_04165 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CTEST_11215 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CTEST_11305 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CTEST_03700 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CTEST_11930 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CTEST_11255 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D CTEST_11265 phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D CTEST_11260 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CTEST_11210 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CTEST_02865 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CTEST_02870 purE; phosphoribosylaminoimidazole carboxylase, PurE protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CTEST_11290 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CTEST_11295 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CTEST_03705 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CTEST_07410 apt; PRPP-binding protein, adenine/guanine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CTEST_09390 putative sugar phosphatase of HAD superfamily K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CTEST_01045 deoD; purine-nucleoside phosphorylase, DeoD family K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CTEST_08905 YfiH family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CTEST_09395 IUNH; Inosine-uridine nucleoside N-ribohydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CTEST_11705 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CTEST_02475 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CTEST_02480 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CTEST_09910 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTEST_10725 xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CTEST_02485 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CTEST_06940 GMP synthase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CTEST_06975 GMP synthase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CTEST_07200 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CTEST_10825 nrdE1; ribonucleoside-diphosphate reductase class Ib alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTEST_10815 nrdF2; ribonucleoside-diphosphate reductase, class 1b, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CTEST_01950 nrdD; ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CTEST_09465 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1] D CTEST_07405 relA; (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CTEST_04260 ppx2; Ppx/GppA phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CTEST_01595 Ppx/GppA phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CTEST_01325 family 3 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CTEST_11935 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CTEST_02730 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D CTEST_00420 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CTEST_02255 adk; adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CTEST_07495 HIT family hydrolase, diadenosine tetraphosphate hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D CTEST_12155 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CTEST_12160 mmcV; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:cted00240] D CTEST_07215 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CTEST_07220 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CTEST_07230 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CTEST_07225 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CTEST_06710 pyrD; dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CTEST_11980 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CTEST_07210 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CTEST_08255 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CTEST_09910 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTEST_02835 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CTEST_06240 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CTEST_06305 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CTEST_09390 putative sugar phosphatase of HAD superfamily K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CTEST_09395 IUNH; Inosine-uridine nucleoside N-ribohydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CTEST_02750 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CTEST_07235 pyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CTEST_08520 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CTEST_01950 nrdD; ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CTEST_12235 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CTEST_10825 nrdE1; ribonucleoside-diphosphate reductase class Ib alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTEST_10815 nrdF2; ribonucleoside-diphosphate reductase, class 1b, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CTEST_03135 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CTEST_07615 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CTEST_08515 deoA; pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D CTEST_03610 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CTEST_07945 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cted00250] D CTEST_08865 L-asparaginase/GlutRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CTEST_09095 asnB; asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CTEST_12220 aspC; aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CTEST_10410 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CTEST_06665 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CTEST_06165 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CTEST_06170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CTEST_11935 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CTEST_11295 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CTEST_07230 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CTEST_03990 gabT; 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CTEST_00355 gabD2; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03970 ssdA; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03985 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03170 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_00705 gltB; glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CTEST_00710 gltD; NADH/NADPH-dependent glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CTEST_04090 gdhA; glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CTEST_08615 gdh; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CTEST_12120 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CTEST_09185 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_09275 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_07215 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CTEST_07220 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CTEST_10590 glsA; L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CTEST_11260 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CTEST_02390 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTEST_11215 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cted00260] D CTEST_01060 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTEST_01065 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTEST_05200 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTEST_05205 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CTEST_09250 thrC; L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CTEST_04360 glyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTEST_08620 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTEST_10325 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTEST_01570 gpmA; phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTEST_05665 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CTEST_03545 serC; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CTEST_10795 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CTEST_09145 gcvP; glycine dehydrogenase, decarboxylating K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CTEST_09150 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_09155 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CTEST_07365 sdaA; L-serine dehydratase, iron-sulfur-dependent, single chain form K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CTEST_08815 ilvA; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CTEST_12985 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CTEST_12980 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CTEST_11340 trpB2; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cted00270] D CTEST_11065 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CTEST_11060 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CTEST_09645 aecD; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CTEST_00160 metE; methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CTEST_07185 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CTEST_12130 Phosphorylase superfamily K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CTEST_08905 YfiH family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CTEST_01060 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTEST_01065 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTEST_05200 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTEST_02645 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CTEST_10395 metB; cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CTEST_02650 cysD; OAH/OAS sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CTEST_09120 ilvE; branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTEST_11990 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_06290 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_02815 thtR; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_12565 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_01515 malate/lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_09965 mdh; malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTEST_07365 sdaA; L-serine dehydratase, iron-sulfur-dependent, single chain form K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CTEST_05665 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CTEST_03545 serC; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:cted00280] D CTEST_09120 ilvE; branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_02500 Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_02810 acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CTEST_02845 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CTEST_02850 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CTEST_02840 Acyl-CoA carboxylase epsilon subunit K27095 accE5; acyl-CoA carboxylase epsilon subunit D CTEST_03715 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CTEST_03710 iolA; methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CTEST_03990 gabT; 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CTEST_00250 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CTEST_09985 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CTEST_00255 lpsJ; 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CTEST_09980 scoB; 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cted00290] D CTEST_08815 ilvA; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CTEST_05850 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CTEST_05855 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CTEST_05740 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CTEST_05625 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CTEST_05630 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CTEST_05635 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CTEST_05610 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CTEST_09120 ilvE; branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTEST_12220 aspC; aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CTEST_01040 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cted00300] D CTEST_05200 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTEST_01060 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTEST_01065 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTEST_07940 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTEST_11460 dapA1; dihydrodipicolinate synthase/N-acetylneuraminate lyase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTEST_07950 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CTEST_04850 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CTEST_04860 tetrahydrodipicolinate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CTEST_06150 argD; acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CTEST_03470 dapC; succinyldiaminopimelate aminotransferase apoenzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CTEST_04865 dapE; succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CTEST_07810 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CTEST_05195 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CTEST_11385 ddh; diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D CTEST_08950 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTEST_08945 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cted00310] D CTEST_04085 ALDH7A1; NAD-dependent aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_03990 gabT; 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CTEST_00355 gabD2; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03970 ssdA; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03985 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03170 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:cted00220] D CTEST_06155 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CTEST_06165 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CTEST_06170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CTEST_10590 glsA; L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CTEST_11260 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CTEST_09185 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_09275 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_07215 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CTEST_07220 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CTEST_04090 gdhA; glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CTEST_08615 gdh; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CTEST_12220 aspC; aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CTEST_06140 argJ; glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CTEST_11855 acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D CTEST_06145 argB; N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CTEST_06135 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CTEST_06150 argD; acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cted00330] D CTEST_03955 puo; monoamine oxidase K03343 puo; putrescine oxidase [EC:1.4.3.10] D CTEST_12490 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CTEST_01620 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CTEST_12120 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CTEST_09880 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CTEST_09870 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:cted00340] D CTEST_06670 hisG; ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CTEST_06675 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CTEST_08670 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CTEST_08685 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CTEST_08690 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CTEST_08675 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CTEST_08710 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CTEST_08715 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_00825 pat; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_03340 hisN; inositol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D CTEST_08720 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CTEST_05080 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D CTEST_05065 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D CTEST_05075 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D CTEST_05055 hutG; formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] C 00350 Tyrosine metabolism [PATH:cted00350] D CTEST_08715 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_00825 pat; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_12015 adh; Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CTEST_09800 nphA1; aromatic ring hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D CTEST_00875 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D CTEST_00865 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D CTEST_00885 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D CTEST_00890 hpcH; 2,4-dihydroxyhept-2-enedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D CTEST_00355 gabD2; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03970 ssdA; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03985 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03170 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_02905 Zn-dependent alcohol dehydrogenase, class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CTEST_04140 faa; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism [PATH:cted00360] D CTEST_12815 paaK; coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D CTEST_12825 phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D CTEST_12830 paaA; phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D CTEST_12835 phenylacetate-CoA oxygenase, PaaH subunit K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D CTEST_12840 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D CTEST_12845 paaJ; phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D CTEST_12850 phenylacetate-CoA oxygenase/reductase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D CTEST_12885 phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D CTEST_12870 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CTEST_08715 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_00825 pat; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_02905 Zn-dependent alcohol dehydrogenase, class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CTEST_12490 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:cted00380] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_12490 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CTEST_01090 katA; catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cted00400] D CTEST_04340 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CTEST_09015 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CTEST_07285 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CTEST_07280 aroQ2; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CTEST_07290 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CTEST_03205 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CTEST_07295 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CTEST_12960 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CTEST_12965 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CTEST_12970 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CTEST_08685 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CTEST_08660 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CTEST_12975 indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D CTEST_12985 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CTEST_12980 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CTEST_11340 trpB2; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CTEST_03660 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D CTEST_00910 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CTEST_12485 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D CTEST_08715 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_00825 pat; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cted00410] D CTEST_01980 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CTEST_03990 gabT; 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CTEST_00365 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D CTEST_00580 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CTEST_11660 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CTEST_03710 iolA; methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:cted00430] D CTEST_05515 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CTEST_10410 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CTEST_00365 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D CTEST_11915 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTEST_11910 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cted00450] D CTEST_10395 metB; cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CTEST_09645 aecD; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CTEST_00160 metE; methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CTEST_07000 csd2; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CTEST_13105 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CTEST_03415 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CTEST_12155 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CTEST_12160 mmcV; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CTEST_04640 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CTEST_04645 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CTEST_03870 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cted00460] D CTEST_05515 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CTEST_08865 L-asparaginase/GlutRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CTEST_04360 glyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cted00470] D CTEST_02400 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CTEST_05870 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTEST_10590 glsA; L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CTEST_11260 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CTEST_10740 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CTEST_08935 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTEST_07810 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CTEST_05195 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:cted00480] D CTEST_05515 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CTEST_02510 putative lactam utilization protein B-like protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CTEST_11835 carboxylate-amine ligase, YbdK family K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D CTEST_09125 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CTEST_10365 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CTEST_02655 icd; isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CTEST_06435 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CTEST_07065 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTEST_11270 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:cted00515] D CTEST_03855 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:cted00514] D CTEST_03855 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:cted00511] D CTEST_12930 nanI; Concanavalin A-like lectin/glucanases superfamily/BNR repeat-like domain K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:cted00542] D CTEST_05325 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cted00541] D CTEST_03820 gtaB; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTEST_01375 galE1; nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTEST_07690 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTEST_12435 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CTEST_12230 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CTEST_01395 rmlA; glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CTEST_01405 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CTEST_01400 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D CTEST_03120 manA; mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CTEST_08505 pmmB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTEST_03110 pmmA; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTEST_04170 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cted00550] D CTEST_11050 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTEST_01510 murB2; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTEST_08920 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CTEST_08935 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTEST_08950 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTEST_05870 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTEST_08945 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CTEST_09510 uppS2; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTEST_06695 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTEST_12425 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTEST_08940 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTEST_08925 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CTEST_08955 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTEST_00195 pbpA; cell elongation-specific peptidoglycan D,D-transpeptidase K05364 pbpA; penicillin-binding protein A D CTEST_02720 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTEST_11715 dacB; D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CTEST_01025 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D CTEST_01020 putative glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cted00552] D CTEST_06695 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTEST_12425 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTEST_05325 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cted00543] D CTEST_05325 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CTEST_11065 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CTEST_02125 teichoic acid biosynthesis protein K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cted00730] D CTEST_08405 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CTEST_06460 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CTEST_05450 iscS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTEST_08415 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D CTEST_07600 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CTEST_08425 thiG; thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CTEST_06470 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CTEST_08410 thiE; thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CTEST_06465 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CTEST_05880 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CTEST_03200 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CTEST_02255 adk; adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cted00740] D CTEST_07140 ribBA; GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CTEST_07150 ribD; diaminohydroxyphosphoribosylaminopyrimidinedeami nase/5-amino-6-(5-phosphoribosylamino)uracilreductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CTEST_07135 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CTEST_07145 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CTEST_08025 ribF; FMN adenylyltransferase/riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CTEST_07360 LLM-partnered FMN reductase, CE1759 family K00299 ssuE; FMN reductase [EC:1.5.1.38] D CTEST_06470 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] C 00750 Vitamin B6 metabolism [PATH:cted00750] D CTEST_09525 pdxY; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CTEST_03545 serC; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CTEST_09250 thrC; L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CTEST_07465 pdxS; pyridoxal phosphate synthase yaaD subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cted00760] D CTEST_08730 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CTEST_10775 pncB1; putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CTEST_01045 deoD; purine-nucleoside phosphorylase, DeoD family K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CTEST_09390 putative sugar phosphatase of HAD superfamily K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CTEST_09860 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CTEST_03280 NUDIX family protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CTEST_10845 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D CTEST_07905 competence/damage-inducible protein CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CTEST_00600 cobB2; NAD-dependent protein deacetylase, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CTEST_06220 ppnK; putative sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CTEST_00355 gabD2; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03970 ssdA; NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03985 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CTEST_03170 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:cted00770] D CTEST_05625 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CTEST_05630 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CTEST_05635 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CTEST_05610 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CTEST_00585 panB; ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CTEST_04690 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CTEST_00580 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CTEST_11660 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CTEST_04355 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CTEST_07190 coaBC; Phosphopantothenate-cysteine ligase/Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CTEST_05920 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CTEST_06015 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CTEST_10660 acpS; phosphopantetheine--protein transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CTEST_09120 ilvE; branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTEST_01980 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:cted00780] D CTEST_06275 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CTEST_06280 bioD1; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CTEST_00325 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CTEST_02855 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cted00785] D CTEST_09160 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CTEST_09165 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CTEST_04665 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_09360 aceE; pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CTEST_09140 aceF; 2-oxoglutarate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTEST_04960 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CTEST_09145 gcvP; glycine dehydrogenase, decarboxylating K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CTEST_09150 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CTEST_09155 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cted00790] D CTEST_11695 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CTEST_12575 pld; phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CTEST_11685 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CTEST_11680 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CTEST_04875 folP2; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CTEST_11690 folP1; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CTEST_03605 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CTEST_09940 folC; folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CTEST_07140 ribBA; GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CTEST_04365 aminodeoxychorismate synthase, component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D CTEST_11195 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CTEST_05295 moaA; cyclic pyranopterin monophosphate synthase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CTEST_05285 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CTEST_00800 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CTEST_03825 moeA1; molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CTEST_00810 molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CTEST_05290 moeA2; molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CTEST_05280 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:cted00670] D CTEST_03605 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CTEST_06655 fhs; Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CTEST_02615 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CTEST_04360 glyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTEST_03700 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CTEST_03705 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CTEST_07170 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CTEST_09150 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CTEST_03610 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CTEST_07945 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CTEST_10720 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CTEST_00155 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CTEST_03815 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cted00860] D CTEST_05810 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_00955 gluQ; tRNA synthetases class I (E and Q), catalytic domain K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_01640 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CTEST_01700 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CTEST_01660 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CTEST_01645 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CTEST_01680 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CTEST_01685 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CTEST_06915 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CTEST_07585 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D CTEST_01655 uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CTEST_08165 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CTEST_03925 radical SAM protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D CTEST_07050 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CTEST_07040 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CTEST_12150 hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CTEST_09115 cobT; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CTEST_09310 fructose-2,6-bisphosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CTEST_00385 heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cted00130] D CTEST_01810 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CTEST_05765 menF; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CTEST_01795 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D CTEST_01785 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CTEST_01770 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D CTEST_01780 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CTEST_06440 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D CTEST_01760 menA; 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CTEST_02890 putative NADPH-quinone reductase (modulator of drug activity B) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D CTEST_04575 Tocopherol cyclase K09834 VTE1; tocopherol cyclase [EC:5.5.1.24] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cted00900] D CTEST_07600 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CTEST_08215 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CTEST_11525 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CTEST_03905 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CTEST_11520 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CTEST_08205 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CTEST_04445 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09620 idi; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CTEST_08995 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTEST_03050 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTEST_04345 uppS1; undecaprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CTEST_09510 uppS2; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:cted00906] D CTEST_03055 crtB; phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CTEST_07055 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cted00523] D CTEST_01395 rmlA; glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CTEST_01405 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CTEST_01400 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D CTEST_05765 menF; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D CTEST_01405 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:cted00332] D CTEST_09880 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CTEST_09870 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cted00261] D CTEST_12155 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CTEST_12160 mmcV; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CTEST_01060 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTEST_01065 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTEST_07940 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTEST_11460 dapA1; dihydrodipicolinate synthase/N-acetylneuraminate lyase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTEST_07950 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cted00521] D CTEST_11465 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_09045 glkA; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_11005 celB; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTEST_12775 ino1; inositol 1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CTEST_08680 impA; inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CTEST_07630 suhB; inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CTEST_01395 rmlA; glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CTEST_01405 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CTEST_01400 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CTEST_11465 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CTEST_09045 glkA; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cted00525] D CTEST_01395 rmlA; glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CTEST_01405 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cted00401] D CTEST_00910 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CTEST_08715 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_00825 pat; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CTEST_12960 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CTEST_12965 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CTEST_09385 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CTEST_07185 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cted00362] D CTEST_05155 muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D CTEST_10000 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D CTEST_00110 putative hydrolase or acyltransferase of alpha/beta superfamily K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D CTEST_02395 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D CTEST_01530 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CTEST_12870 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:cted00627] D CTEST_12490 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CTEST_08575 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CTEST_00855 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7] C 00364 Fluorobenzoate degradation D CTEST_02395 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:cted00625] D CTEST_12015 adh; Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cted00361] D CTEST_02395 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00623 Toluene degradation [PATH:cted00623] D CTEST_00855 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7] D CTEST_02905 Zn-dependent alcohol dehydrogenase, class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CTEST_02395 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation [PATH:cted00622] D CTEST_02905 Zn-dependent alcohol dehydrogenase, class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:cted00643] D CTEST_12490 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:cted00626] D CTEST_12015 adh; Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cted03020] D CTEST_01930 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTEST_01935 rpoC; DNA-directed RNA polymerase, beta' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTEST_02290 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTEST_07195 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D CTEST_03480 DNA/RNA helicase, superfamily II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cted03010] D CTEST_06005 rpsA; SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D CTEST_08310 rpsB; SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D CTEST_02055 rpsC; SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CTEST_02285 rpsD; SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D CTEST_02230 rpsE; SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D CTEST_12750 rpsF; SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D CTEST_01965 rpsG; SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D CTEST_02215 rpsH; SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D CTEST_02360 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CTEST_02020 rpsJ; SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D CTEST_02280 rpsK; SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D CTEST_01960 rpsL; SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D CTEST_02275 rpsM; SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D CTEST_03745 rpsN; SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D CTEST_07975 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CTEST_08535 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CTEST_02070 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D CTEST_03740 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D CTEST_02045 rpsS; SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D CTEST_09815 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CTEST_01865 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CTEST_02040 rplB; LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CTEST_02025 rplC; LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D CTEST_02030 rplD; LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D CTEST_02195 rplE; LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D CTEST_02220 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CTEST_01890 rplL; LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D CTEST_12740 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CTEST_01885 rplJ; LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D CTEST_01860 rplK; LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CTEST_02355 rplM; LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D CTEST_02185 rplN; LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CTEST_02240 rplO; LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CTEST_02060 rplP; LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D CTEST_02295 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CTEST_02225 rplR; LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CTEST_08400 rplS; LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D CTEST_06080 rplT; LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D CTEST_09895 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CTEST_02050 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CTEST_02035 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CTEST_02190 rplX; LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CTEST_04150 rplY; ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D CTEST_09890 rpmA; LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D CTEST_03755 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CTEST_02065 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D CTEST_02235 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D CTEST_03775 rpmE; LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D CTEST_03780 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D CTEST_03750 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D CTEST_06075 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D CTEST_10840 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D CTEST_r06185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r11045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r12670 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r03450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r03455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r06190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r11040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r12665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r03460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r06195 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r11035 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r12660 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cted00970] D CTEST_t00060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTEST_t10985 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTEST_t10990 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTEST_t00850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t00835 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t05180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t03590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t10445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t09430 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTEST_t11080 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CTEST_t11085 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CTEST_t07555 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CTEST_t04190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTEST_t05825 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTEST_t05830 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTEST_t05835 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTEST_t11090 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTEST_t07540 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t07565 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t07550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t10305 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t12240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t10475 tRNA-His K14226 tRNA-His; tRNA His D CTEST_t00055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTEST_t05980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t06735 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t10700 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t00220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t04265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t11135 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTEST_t10575 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTEST_t09425 tRNA-Met K14230 tRNA-Met; tRNA Met D CTEST_t03325 tRNA-Met K14230 tRNA-Met; tRNA Met D CTEST_t01840 tRNA-Met K14230 tRNA-Met; tRNA Met D CTEST_t11075 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CTEST_t01160 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTEST_t10300 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTEST_t06370 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTEST_t00930 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTEST_t00795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTEST_t00830 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTEST_t00985 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTEST_t01835 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTEST_t01335 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTEST_t11400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTEST_t01845 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CTEST_t01825 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CTEST_t07545 tRNA-Val K14237 tRNA-Val; tRNA Val D CTEST_t07560 tRNA-Val K14237 tRNA-Val; tRNA Val D CTEST_t07535 tRNA-Val K14237 tRNA-Val; tRNA Val D CTEST_t09350 tRNA-Val K14237 tRNA-Val; tRNA Val D CTEST_05810 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_00955 gluQ; tRNA synthetases class I (E and Q), catalytic domain K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_05530 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CTEST_05565 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CTEST_05525 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CTEST_07320 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTEST_07335 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTEST_09490 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTEST_07500 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTEST_12460 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTEST_04645 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CTEST_11445 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTEST_03870 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTEST_07170 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CTEST_09945 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTEST_12925 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTEST_08880 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTEST_11620 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTEST_05190 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTEST_08100 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTEST_07370 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTEST_06100 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTEST_06105 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTEST_06180 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTEST_02705 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cted03060] D CTEST_02250 secY; protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D CTEST_01850 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D CTEST_07085 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CTEST_07425 secD; protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D CTEST_07420 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D CTEST_07430 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CTEST_12630 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_13140 preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_06385 secA2; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTEST_03165 secA1; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTEST_08545 ffh; signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTEST_00990 Bacterial small signal recognition particle RNA K01983 ffs; SRP RNA D CTEST_08565 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CTEST_11655 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CTEST_06595 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D CTEST_04930 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D CTEST_06590 tatC; twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CTEST_08380 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CTEST_08845 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cted04122] D CTEST_05450 iscS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTEST_11990 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_06290 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_02815 thtR; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CTEST_05475 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CTEST_00800 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CTEST_05295 moaA; cyclic pyranopterin monophosphate synthase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CTEST_00815 molybdopterin converting factor, small subunit K03636 moaD; sulfur-carrier protein D CTEST_08430 thiamine biosynthesis protein ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D CTEST_05285 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CTEST_08420 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome D CTEST_06625 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:cted03018] D CTEST_09900 rne; ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D CTEST_04245 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTEST_07965 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CTEST_05085 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTEST_03880 ATP-dependent DNA helicase, RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CTEST_05305 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CTEST_07935 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] D CTEST_12115 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CTEST_11775 groL2; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_02450 groL1; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_04005 ppk2A; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CTEST_11760 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CTEST_13080 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cted03030] D CTEST_05755 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_08760 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_01030 dnaQ1; Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_05490 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_08825 dnaE; DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTEST_01005 dnaX; DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTEST_01330 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTEST_09830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTEST_00010 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTEST_12735 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CTEST_09450 dnaG; DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D CTEST_12745 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_10435 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_09310 fructose-2,6-bisphosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CTEST_08375 rnhB; RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CTEST_05985 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTEST_05510 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cted03410] D CTEST_01210 nth; endonuclease III; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CTEST_05885 ung1; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CTEST_11585 mutY; A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CTEST_00565 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CTEST_08590 mutM; DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CTEST_12805 nei1; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CTEST_03625 formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CTEST_03840 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CTEST_11860 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CTEST_02690 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CTEST_05985 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTEST_05510 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cted03420] D CTEST_04200 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CTEST_00105 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D CTEST_06055 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CTEST_06025 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CTEST_07125 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CTEST_03665 uvrD1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_03270 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_03285 uvrD2; ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_05985 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTEST_05510 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTEST_03480 DNA/RNA helicase, superfamily II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:cted03430] D CTEST_03665 uvrD1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_03270 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_03285 uvrD2; ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_04440 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CTEST_04435 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CTEST_12745 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_10435 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_08825 dnaE; DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTEST_00010 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTEST_01005 dnaX; DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTEST_09830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTEST_01330 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTEST_05755 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_08760 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_01030 dnaQ1; Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_05490 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_05510 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTEST_12530 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:cted03440] D CTEST_12745 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_10435 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CTEST_09515 recO; DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CTEST_01015 recR; DNA replication and repair protein RecR K06187 recR; recombination protein RecR D CTEST_07870 recA; protein RecA K03553 recA; recombination protein RecA D CTEST_05985 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTEST_07440 ruvA; Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CTEST_07435 ruvB; Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CTEST_07445 ruvC; Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CTEST_05895 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CTEST_08825 dnaE; DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTEST_00010 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTEST_01005 dnaX; DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTEST_09830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTEST_01330 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTEST_05755 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_08760 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_01030 dnaQ1; Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_05490 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_07180 priA; replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:cted03250] D CTEST_00170 ppiA; peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cted02010] D CTEST_05655 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CTEST_05650 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15577 nrtB; nitrate/nitrite transport system permease protein D CTEST_05645 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CTEST_05220 molA; molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CTEST_05215 ABC-type sulfate transport system, permease component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CTEST_00290 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D CTEST_10345 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D CTEST_00285 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D CTEST_10340 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D CTEST_10335 fbpC1; ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CTEST_00280 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CTEST_12055 proX; ABC family glycine betaine transport, substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CTEST_12060 ABC-type proline/glycine betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D CTEST_12065 ABC-type proline/glycine betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D CTEST_12070 opuBA; ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CTEST_08270 ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CTEST_10645 msmX; ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CTEST_03035 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CTEST_02930 ABC-type sugar transport system, periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein D CTEST_08285 ABC-type sugar transport system, periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein D CTEST_02925 carbohydrate ABC transporter membrane protein 1, CUT1 family K10237 thuF; trehalose/maltose transport system permease protein D CTEST_08280 sugA; permease component of ABC-type sugar transporter K10237 thuF; trehalose/maltose transport system permease protein D CTEST_08275 carbohydrate ABC transporter membrane protein 2, CUT1 family K10238 thuG; trehalose/maltose transport system permease protein D CTEST_02920 carbohydrate ABC transporter membrane protein 2, CUT1 family K10238 thuG; trehalose/maltose transport system permease protein D CTEST_09720 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein D CTEST_09715 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D CTEST_09710 rbsA; monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CTEST_09730 ABC-type ribose transport system, auxiliary component K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D CTEST_11170 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D CTEST_11165 pstC2; phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D CTEST_11160 pstA1; phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D CTEST_11155 pstB; phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CTEST_10045 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CTEST_10035 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CTEST_10040 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CTEST_07850 gluB; L-glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D CTEST_07855 gluC; L-glutamate ABC transporter membrane protein K10006 gluC; glutamate transport system permease protein D CTEST_07860 gluD; L-glutamate ABC transporter membrane protein K10007 gluD; glutamate transport system permease protein D CTEST_07845 gluA; L-glutamate ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CTEST_00320 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D CTEST_02575 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D CTEST_00310 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D CTEST_02565 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D CTEST_00315 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D CTEST_02570 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D CTEST_04720 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D CTEST_04725 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein D CTEST_04730 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein D CTEST_04735 dppD3; putative peptide ABC transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTEST_04755 ABC-type dipeptide transport system, periplasmic component K13889 gsiB; glutathione transport system substrate-binding protein D CTEST_04740 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K13890 gsiC; glutathione transport system permease protein D CTEST_04745 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K13891 gsiD; glutathione transport system permease protein D CTEST_04750 oligopeptide/dipeptide ABC transporter, ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D CTEST_02165 ABC-type Fe2+-enterobactin transport system, periplasmic component K23185 fepB; ferric enterobactin transport system substrate-binding protein D CTEST_08455 frgD; ABC-type Fe3+-hydroxamate transport system, periplasmic component K25286 fagD; iron-siderophore transport system substrate-binding protein D CTEST_02680 irp1A; ABC-type Fe3+-hydroxamate transport system, periplasmic component K25286 fagD; iron-siderophore transport system substrate-binding protein D CTEST_02180 ABC-type Fe3+-siderophore transport system, permease component K23186 fepD; iron-siderophore transport system permease protein D CTEST_02675 ABC-type Fe3+-siderophore transport system, permease component K23186 fepD; iron-siderophore transport system permease protein D CTEST_08450 fagA; ABC-type Fe3+-siderophore transport system, permease component K23186 fepD; iron-siderophore transport system permease protein D CTEST_02175 ABC-type enterobactin transport system, permease component K23187 fepG; iron-siderophore transport system permease protein D CTEST_02670 ABC-type enterobactin transport system, permease component K23187 fepG; iron-siderophore transport system permease protein D CTEST_08445 fagB; ABC-type enterobactin transport system, permease component K23187 fepG; iron-siderophore transport system permease protein D CTEST_02170 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CTEST_02665 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CTEST_08440 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CTEST_07880 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D CTEST_07890 ABC-type cobalt transport system, permease component CbiQ K16783 bioN; biotin transport system permease protein D CTEST_07885 ABC-type cobalt transport system, ATPase component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CTEST_04710 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D CTEST_00780 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D CTEST_00775 rfbE; ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CTEST_10875 MacB-like periplasmic core domain/FtsX-like permease family K09813 hrtB; hemin transport system permease protein D CTEST_10870 ABC-type antimicrobial peptide transport system, ATPase component K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CTEST_08135 ABC-2 family transporter protein K20460 nukE; lantibiotic transport system permease protein D CTEST_10155 ABC-2 family transporter protein K20460 nukE; lantibiotic transport system permease protein D CTEST_10150 hypothetical protein K20461 nukG; lantibiotic transport system permease protein D CTEST_08130 hypothetical protein K20461 nukG; lantibiotic transport system permease protein D CTEST_10160 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein D CTEST_08140 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein D CTEST_10075 ABC-2 family transporter protein K20491 nisE; lantibiotic transport system permease protein D CTEST_10070 ABC transporter K20490 nisF; lantibiotic transport system ATP-binding protein D CTEST_03375 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein D CTEST_03370 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CTEST_08290 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CTEST_08295 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CTEST_12195 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CTEST_12200 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CTEST_08855 ATPase component of ABC transporters with duplicated ATPase domain K18230 tylC; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cted02060] D CTEST_07755 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CTEST_07770 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr D CTEST_05410 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_11505 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_05400 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_05395 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CTEST_11510 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CTEST_11560 scrA; PTS system sucrose-specific EIIBCA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CTEST_11725 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CTEST_01875 bglP; PTS system, glucose subfamily, IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CTEST_10675 bglF; beta-glucoside specific PTS system component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CTEST_06010 ptsM; PTS system mannose-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CTEST_07765 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CTEST_07760 hexose kinase, 1-phosphofructokinase family K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:cted03070] D CTEST_07425 secD; protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D CTEST_07420 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D CTEST_01850 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D CTEST_07085 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CTEST_02250 secY; protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D CTEST_07430 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CTEST_12630 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_13140 preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_06385 secA2; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTEST_03165 secA1; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTEST_08565 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CTEST_08545 ffh; signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTEST_06595 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D CTEST_04930 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D CTEST_06590 tatC; twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:cted02020] D CTEST_12575 pld; phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CTEST_01575 senX3; histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CTEST_01580 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CTEST_11170 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D CTEST_13050 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D CTEST_13045 Tripartite tricarboxylate transporter TctB family K07794 tctB; putative tricarboxylic transport membrane protein D CTEST_13040 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CTEST_07040 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CTEST_03790 mprB; signal transduction histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CTEST_03785 mprA; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D CTEST_03795 trypsin-like serine protease with C-terminal PDZ domain K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CTEST_03145 mtrB; signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CTEST_03140 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CTEST_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CTEST_05455 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D CTEST_10070 ABC transporter K20490 nisF; lantibiotic transport system ATP-binding protein D CTEST_10075 ABC-2 family transporter protein K20491 nisE; lantibiotic transport system permease protein D CTEST_10555 malS; malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CTEST_03560 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CTEST_05240 narG; respiratory nitrate reductase alpha subunit apoprotein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CTEST_05235 narH; respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CTEST_05225 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CTEST_05230 narJ; respiratory nitrate reductase chaperone NarJ K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D CTEST_08390 signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D CTEST_08395 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR D CTEST_01260 helicase/secretion neighborhood ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CTEST_01265 type II secretion system protein F (GspF) K12510 tadB; tight adherence protein B D CTEST_08550 glnD; UTP:GlnB (protein PII) uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D CTEST_08555 glnK; nitrogen regulatory protein P-II family K04751 glnB; nitrogen regulatory protein P-II 1 D CTEST_09185 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_09275 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_01205 crp; transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CTEST_10590 glsA; L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CTEST_09330 ptpA; protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cted02024] D CTEST_12960 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CTEST_12965 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CTEST_04340 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CTEST_09015 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CTEST_01535 fadD2; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_09590 fadD15; AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_01205 crp; transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CTEST_07150 ribD; diaminohydroxyphosphoribosylaminopyrimidinedeami nase/5-amino-6-(5-phosphoribosylamino)uracilreductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CTEST_04720 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D CTEST_04725 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein D CTEST_04730 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein D CTEST_04735 dppD3; putative peptide ABC transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTEST_01135 ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTEST_09680 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTEST_07415 dciAE; extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTEST_11480 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTEST_01140 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTEST_09685 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTEST_11485 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTEST_01145 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTEST_09690 appC; ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTEST_11490 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTEST_01150 putative ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTEST_09695 ABC superfamily ATP binding cassette transporter, ABC protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTEST_11495 ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTEST_12630 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_13140 preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_01850 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D CTEST_07085 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CTEST_02250 secY; protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D CTEST_07430 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CTEST_06385 secA2; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTEST_03165 secA1; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTEST_08565 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CTEST_08545 ffh; signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTEST_10070 ABC transporter K20490 nisF; lantibiotic transport system ATP-binding protein D CTEST_10075 ABC-2 family transporter protein K20491 nisE; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D CTEST_09720 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly D CTEST_07640 rpoD; RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CTEST_04245 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cted01501] D CTEST_12260 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CTEST_04720 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D CTEST_04725 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein D CTEST_04730 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein D CTEST_04735 dppD3; putative peptide ABC transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTEST_08955 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cted01502] D CTEST_05870 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTEST_02400 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CTEST_08945 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CTEST_08940 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTEST_08925 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cted01503] D CTEST_13115 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTEST_00170 ppiA; peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CTEST_05455 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cted01000] C 01001 Protein kinases [BR:cted01001] D CTEST_11905 protein kinase family protein K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D CTEST_00190 pknA; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CTEST_00185 pknB; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CTEST_09010 pknL; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CTEST_12555 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CTEST_01575 senX3; histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CTEST_03790 mprB; signal transduction histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CTEST_03145 mtrB; signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CTEST_11345 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CTEST_08390 signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cted01009] D CTEST_00205 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CTEST_10795 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:cted01002] D CTEST_08845 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D CTEST_07300 type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CTEST_02485 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CTEST_06940 GMP synthase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CTEST_06975 GMP synthase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CTEST_09055 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTEST_09060 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTEST_02740 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTEST_06920 cell wall-associated hydrolase, invasion-associated protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CTEST_11215 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CTEST_00705 gltB; glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CTEST_02390 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTEST_09095 asnB; asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CTEST_03770 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D CTEST_07970 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D CTEST_05905 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D CTEST_00435 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D CTEST_04520 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D CTEST_09200 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D CTEST_12495 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D CTEST_04470 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D CTEST_10365 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CTEST_09610 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D CTEST_00690 pepO; putative metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CTEST_09125 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CTEST_04865 dapE; succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CTEST_11780 hypothetical protein K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D CTEST_08195 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CTEST_02260 map-1; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CTEST_11700 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTEST_00700 putative membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-] D CTEST_03795 trypsin-like serine protease with C-terminal PDZ domain K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CTEST_02325 subtilase family protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CTEST_01420 serine protease, S9A family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D CTEST_11285 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CTEST_02720 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTEST_11715 dacB; D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CTEST_10285 clpP1; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CTEST_10290 clpP2; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CTEST_03305 putative secreted protein containing a PDZ domain K07177 K07177; Lon-like protease D CTEST_07745 lexA; SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CTEST_08380 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CTEST_09370 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D CTEST_05515 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 01003 Glycosyltransferases [BR:cted01003] D CTEST_02100 exoM; Glycosyltransferase like family 2 K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356] D CTEST_06540 ppm1; glycosyl transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D CTEST_03855 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D CTEST_07480 pimA; Phosphatidylinositol alpha-mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D CTEST_09050 pimB; glycosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D CTEST_01805 mgtA; glycosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D CTEST_04905 glgA; glycogen synthase (ADP-glucose) K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CTEST_05325 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CTEST_09025 putative DUF2029 family protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CTEST_05605 putative DUF2029 family protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CTEST_09000 mptA; carotene biosynthesis associated membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CTEST_07025 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CTEST_00715 cell wall arabinan synthesis protein K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D CTEST_00720 aftA; Arabinofuranosyltransferase N terminal/Arabinofuranosyltransferase A C terminal K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D CTEST_12390 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D CTEST_07575 putative DUF2029 family protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D CTEST_12275 putative DUF3367 family protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D CTEST_02310 hypothetical protein K22902 K22902; D-galactosaminyltransferase D CTEST_02125 teichoic acid biosynthesis protein K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-] D CTEST_00765 glfT1; putative glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D CTEST_12405 glfT2; putative glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D CTEST_03085 wbbL; putative glycosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D CTEST_11415 otsA; Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CTEST_04880 Glycosyl transferase family 2 K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cted01005] D CTEST_05325 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cted01011] D CTEST_11050 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTEST_01510 murB2; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTEST_08920 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CTEST_08935 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTEST_08950 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTEST_05870 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTEST_02400 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CTEST_10740 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CTEST_08940 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTEST_08925 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CTEST_06695 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTEST_12425 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTEST_13095 putative membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D CTEST_08955 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTEST_00195 pbpA; cell elongation-specific peptidoglycan D,D-transpeptidase K05364 pbpA; penicillin-binding protein A D CTEST_02720 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTEST_11715 dacB; D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CTEST_09055 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTEST_09060 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTEST_02740 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTEST_06920 cell wall-associated hydrolase, invasion-associated protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CTEST_07310 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CTEST_13115 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cted01004] D CTEST_10665 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CTEST_01520 3-oxoacyl-(acyl-carrier protein) reductase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CTEST_07455 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CTEST_03195 desA3; fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D CTEST_12360 pks13; polyketide synthase family protein K12437 pks13; polyketide synthase 13 D CTEST_01535 fadD2; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_09590 fadD15; AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_12365 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K12428 fadD32; fatty acid CoA ligase FadD32 D CTEST_09040 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cted01006] D CTEST_08995 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTEST_03050 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTEST_04345 uppS1; undecaprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CTEST_09510 uppS2; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTEST_03055 crtB; phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D CTEST_07815 miaA; tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CTEST_01760 menA; 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CTEST_07050 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CTEST_12395 decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:cted01007] D CTEST_05810 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_00955 gluQ; tRNA synthetases class I (E and Q), catalytic domain K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_06180 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTEST_02705 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CTEST_11445 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTEST_05190 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTEST_03870 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTEST_08880 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTEST_09945 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTEST_12925 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTEST_11620 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTEST_07335 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTEST_07370 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTEST_09490 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTEST_12460 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTEST_08100 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTEST_07500 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTEST_07320 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTEST_06100 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTEST_06105 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTEST_12220 aspC; aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CTEST_03470 dapC; succinyldiaminopimelate aminotransferase apoenzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CTEST_08715 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_00825 pat; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CTEST_09645 aecD; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CTEST_06150 argD; acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CTEST_03990 gabT; 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CTEST_06275 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CTEST_01700 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CTEST_09120 ilvE; branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTEST_03545 serC; phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cted00194] D CTEST_05370 atpC; ATP synthase, F1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CTEST_05365 atpD; ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CTEST_05360 atpG; ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CTEST_05355 atpA; ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CTEST_05350 atpH; ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CTEST_05345 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CTEST_05340 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CTEST_05335 atpB; F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cted03000] D CTEST_07725 oxyR; transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CTEST_05585 lysG; transcriptional regulator, ArgP family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CTEST_12595 transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D CTEST_07750 sugR; transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CTEST_09705 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CTEST_12465 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D CTEST_10385 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D CTEST_09675 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D CTEST_00450 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CTEST_08745 transcriptional regulator, TetR family K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D CTEST_10265 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D CTEST_06935 acnR; transcriptional regulator, TetR family K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D CTEST_11335 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D CTEST_11055 GAF modulated transcriptional regulator, LuxR family K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D CTEST_02950 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D CTEST_12100 putative transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D CTEST_09500 zur; Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CTEST_09990 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D CTEST_01205 crp; transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CTEST_03015 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CTEST_03025 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CTEST_02940 putative transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CTEST_02975 transcriptional regulator, ArsR family K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CTEST_02770 putative transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D CTEST_01450 putative transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D CTEST_02755 DNA binding protein with helix-turn-helix domain K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D CTEST_07900 DNA binding protein with helix-turn-helix domain K27043 clgR; XRE family transcriptional regulator, stress-response regulator D CTEST_07685 dtxR; iron (metal) dependent repressor, DtxR family K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D CTEST_02855 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CTEST_05815 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D CTEST_04840 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D CTEST_04115 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D CTEST_12120 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CTEST_05405 transcriptional antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator D CTEST_11735 transcriptional antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator D CTEST_10685 licT; transcriptional antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator D CTEST_02455 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CTEST_01185 whiB4; Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CTEST_03095 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CTEST_03230 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CTEST_11095 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CTEST_13125 parB; chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTEST_11530 carD; transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D CTEST_06160 argR; transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism D CTEST_09555 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D CTEST_10200 phenylacetic acid-responsive transcriptional repressor K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D CTEST_11825 phage shock protein C (PspC) family protein K03973 pspC; phage shock protein C D CTEST_08530 deoR; transcriptional regulator with sigma factor-related N-terminal domain K05346 deoR; deoxyribonucleoside regulator D CTEST_07235 pyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CTEST_13075 putative transcriptional regulator K07735 algH; putative transcriptional regulator D CTEST_07740 nrdR; ATP cone domain-containing protein K07738 nrdR; transcriptional repressor NrdR D CTEST_08975 mraZ; mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cted03021] D CTEST_03480 DNA/RNA helicase, superfamily II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CTEST_02290 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTEST_01930 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTEST_01935 rpoC; DNA-directed RNA polymerase, beta' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTEST_07195 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CTEST_07640 rpoD; RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D CTEST_07680 sigB; RNA polymerase sigma factor, sigma-70 family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CTEST_03220 rpoE; RNA polymerase sigma-70 factor, TIGR02947 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTEST_02460 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTEST_01085 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTEST_04920 sigE; RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTEST_08080 nusA; NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D CTEST_07265 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D CTEST_01855 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D CTEST_04320 transcription elongation factor K03624 greA; transcription elongation factor GreA D CTEST_05305 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cted03019] D CTEST_09900 rne; ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D CTEST_08595 rnc; RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTEST_07935 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] D CTEST_09455 guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CTEST_10470 orn; oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-] D CTEST_05085 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTEST_03880 ATP-dependent DNA helicase, RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CTEST_04245 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTEST_07965 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CTEST_05305 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CTEST_12115 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CTEST_11775 groL2; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_02450 groL1; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_04005 ppk2A; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CTEST_11760 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CTEST_13080 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CTEST_04040 RraA family protein K02553 rraA; regulator of ribonuclease activity A D CTEST_07120 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ D CTEST_06585 helY; superfamily II RNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D CTEST_07735 hrpA; RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D CTEST_00640 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:cted03011] D CTEST_06005 rpsA; SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D CTEST_08310 rpsB; SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D CTEST_02055 rpsC; SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CTEST_02285 rpsD; SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D CTEST_02230 rpsE; SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D CTEST_12750 rpsF; SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D CTEST_01965 rpsG; SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D CTEST_02215 rpsH; SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D CTEST_02360 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CTEST_02020 rpsJ; SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D CTEST_02280 rpsK; SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D CTEST_01960 rpsL; SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D CTEST_02275 rpsM; SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D CTEST_03745 rpsN; SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D CTEST_07975 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CTEST_08535 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CTEST_02070 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D CTEST_03740 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D CTEST_02045 rpsS; SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D CTEST_09815 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CTEST_01865 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CTEST_02040 rplB; LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CTEST_02025 rplC; LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D CTEST_02030 rplD; LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D CTEST_02195 rplE; LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D CTEST_02220 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CTEST_12740 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CTEST_01885 rplJ; LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D CTEST_01860 rplK; LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CTEST_01890 rplL; LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D CTEST_02355 rplM; LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D CTEST_02185 rplN; LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CTEST_02240 rplO; LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CTEST_02060 rplP; LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D CTEST_02295 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CTEST_02225 rplR; LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CTEST_08400 rplS; LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D CTEST_06080 rplT; LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D CTEST_09895 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CTEST_02050 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CTEST_02035 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CTEST_02190 rplX; LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CTEST_09890 rpmA; LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D CTEST_03755 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CTEST_02065 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D CTEST_02235 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D CTEST_03775 rpmE; LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D CTEST_03780 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D CTEST_03750 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D CTEST_06075 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D CTEST_10840 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D CTEST_04150 rplY; ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D CTEST_r03460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r06195 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r11035 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r12660 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r06185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r11045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r12670 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r03450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r03455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r06190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r11040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r12665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cted03009] D CTEST_08595 rnc; RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTEST_10470 orn; oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-] D CTEST_09520 era; GTP-binding protein Era K03595 era; GTPase D CTEST_09885 obg; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D CTEST_08080 nusA; NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D CTEST_07265 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D CTEST_01855 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D CTEST_03900 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CTEST_07165 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CTEST_05915 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CTEST_09545 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CTEST_13135 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CTEST_08965 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CTEST_03860 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CTEST_06215 tlyA; hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CTEST_04895 rrmA; 23S rRNA m(1)G-748 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CTEST_11440 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CTEST_08235 rlmN; 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CTEST_12655 23S RNA-specific pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CTEST_04825 23S RNA-specific pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CTEST_06300 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CTEST_08840 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CTEST_02425 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CTEST_08485 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D CTEST_09900 rne; ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D CTEST_07315 RNAse H-fold protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CTEST_05085 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTEST_03200 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CTEST_06310 der; ribosome-associated GTPase EngA K03977 engA; GTPase D CTEST_07795 hflX; GTP-binding protein HflX K03665 hflX; GTPase D CTEST_05320 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CTEST_07405 relA; (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CTEST_08060 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CTEST_08085 hypothetical protein K09748 rimP; ribosome maturation factor RimP D CTEST_00660 hypothetical protein K14761 rlbA; ribosome-associated protein D CTEST_09855 ribosome silencing factor RsfS/YbeB/iojap K09710 ybeB; ribosome-associated protein D CTEST_09535 putative rRNA maturation factor K07042 ybeY; probable rRNA maturation factor D CTEST_04485 engD; GTP-binding protein K06942 ychF; ribosome-binding ATPase D CTEST_08600 putative metal-binding protein, possibly nucleic-acid binding K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cted03016] D CTEST_09455 guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CTEST_01870 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D CTEST_05810 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_00955 gluQ; tRNA synthetases class I (E and Q), catalytic domain K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_08100 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTEST_08880 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTEST_12925 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTEST_03870 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTEST_05190 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTEST_11620 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTEST_07335 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTEST_07320 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTEST_09490 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTEST_07500 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTEST_12460 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTEST_11445 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTEST_09945 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTEST_07370 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTEST_06100 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTEST_06105 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTEST_06180 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTEST_02705 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CTEST_07675 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CTEST_06630 trmI; tRNA (adenine-58-N(1)-) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D CTEST_12320 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CTEST_02305 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CTEST_08030 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CTEST_05450 iscS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTEST_05320 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CTEST_07815 miaA; tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CTEST_04640 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CTEST_03615 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CTEST_13150 Ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CTEST_09305 Bacterial RNase P class A K01978 rnpB; M1 RNA D CTEST_10730 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CTEST_07595 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CTEST_09700 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D CTEST_03215 Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CTEST_00920 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CTEST_07840 miaB; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CTEST_08480 trmD; tRNA-(guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CTEST_06090 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D CTEST_12655 23S RNA-specific pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CTEST_04825 23S RNA-specific pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CTEST_05475 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CTEST_11200 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D CTEST_00940 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CTEST_11710 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CTEST_02420 tRNA threonylcarbamoyl adenosine modification protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CTEST_02430 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CTEST_02405 tRNA threonylcarbamoyl adenosine modification protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CTEST_07965 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cted03012] D CTEST_08070 infB; bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D CTEST_06070 infC; bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D CTEST_08305 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CTEST_01975 tuf; translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D CTEST_01970 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G D CTEST_04650 selB; selenocysteine-specific elongation factor SelB K03833 selB; selenocysteine-specific elongation factor D CTEST_05310 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CTEST_08250 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D CTEST_05315 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CTEST_04120 pth2; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CTEST_04145 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CTEST_02270 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D CTEST_07270 efp; translation elongation factor P K02356 efp; elongation factor P D CTEST_03355 prfB; bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 D CTEST_04100 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:cted03110] D CTEST_12005 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CTEST_11595 clpC; ATPase with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CTEST_09975 clpX; endopeptidase Clp ATP-binding regulatory subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CTEST_12115 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CTEST_09960 hscA; Hsp70 protein K04044 hscA; molecular chaperone HscA D CTEST_11775 groL2; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_02450 groL1; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_12105 dnaJ2; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CTEST_09550 dnaJ1; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CTEST_12110 grpE; molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D CTEST_08785 ribosome-associated heat shock protein implicated in recycling of 50S subunit K04762 hslR; ribosome-associated heat shock protein Hsp15 D CTEST_02445 groES; Co-chaperonin GroES K04078 groES; chaperonin GroES D CTEST_11700 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTEST_05335 atpB; F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CTEST_07510 hypothetical protein K09796 pccA; periplasmic copper chaperone A D CTEST_02325 subtilase family protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CTEST_00170 ppiA; peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CTEST_07385 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CTEST_12700 trxA; thioredoxin K03671 TXN; thioredoxin D CTEST_13110 thioredoxin K03671 TXN; thioredoxin D CTEST_05390 thioredoxin domain-containing protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:cted04131] D CTEST_09910 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTEST_11655 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CTEST_04130 gapB; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTEST_07105 gap; glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTEST_01570 gpmA; phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTEST_08650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTEST_12515 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTEST_11380 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:cted04121] D CTEST_06615 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:cted03051] D CTEST_06625 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase D CTEST_06610 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D CTEST_06605 putative transcriptional regulator K13572 pafB; proteasome accessory factor B D CTEST_06600 putative transcriptional regulator K13573 pafC; proteasome accessory factor C D CTEST_06620 dop; proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:cted03032] D CTEST_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CTEST_12735 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CTEST_09450 dnaG; DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D CTEST_12745 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_10435 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_08825 dnaE; DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTEST_00010 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTEST_09830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTEST_01330 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTEST_05755 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_08760 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_01030 dnaQ1; Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_05490 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_01005 dnaX; DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTEST_09310 fructose-2,6-bisphosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CTEST_08375 rnhB; RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CTEST_05985 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTEST_05510 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTEST_12530 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CTEST_00045 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTEST_00025 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTEST_01310 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cted03036] D CTEST_08595 rnc; RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTEST_06830 Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D CTEST_12615 Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D CTEST_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CTEST_05585 lysG; transcriptional regulator, ArgP family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CTEST_08570 smc; condensin subunit Smc K03529 smc; chromosome segregation protein D CTEST_06260 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D CTEST_06295 condensin subunit ScpB K06024 scpB; segregation and condensation protein B D CTEST_03370 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CTEST_08955 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTEST_07925 ftsK; FtsK/SpoIIIE family protein,Ftsk gamma domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CTEST_08915 ftsQ; cell division septal protein K03589 ftsQ; cell division protein FtsQ D CTEST_08930 bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW D CTEST_03375 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein D CTEST_08910 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CTEST_13115 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTEST_08895 hypothetical protein K09772 sepF; cell division inhibitor SepF D CTEST_06255 hypothetical protein K03496 parA; chromosome partitioning protein D CTEST_13130 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein D CTEST_13125 parB; chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTEST_13135 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CTEST_08325 xerC; site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC D CTEST_06250 xerD; tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD D CTEST_04935 mrp; putative mrp family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CTEST_00520 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D CTEST_07110 hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cted03400] D CTEST_03935 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CTEST_03945 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CTEST_05885 ung1; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CTEST_00565 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CTEST_11585 mutY; A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CTEST_01210 nth; endonuclease III; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CTEST_03480 DNA/RNA helicase, superfamily II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CTEST_11890 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CTEST_05020 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CTEST_07615 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CTEST_03930 alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D CTEST_03840 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CTEST_08590 mutM; DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CTEST_12805 nei1; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CTEST_03625 formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CTEST_11860 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CTEST_02690 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CTEST_05510 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTEST_05985 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTEST_00105 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D CTEST_06055 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CTEST_06025 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CTEST_07125 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CTEST_03665 uvrD1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_03270 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_03285 uvrD2; ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTEST_01930 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTEST_01935 rpoC; DNA-directed RNA polymerase, beta' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTEST_02290 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTEST_07195 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CTEST_04200 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CTEST_04440 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CTEST_04435 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CTEST_08825 dnaE; DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTEST_00010 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTEST_09830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTEST_01330 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTEST_05755 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_08760 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_01030 dnaQ1; Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_05490 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTEST_01005 dnaX; DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTEST_12745 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_10435 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_12530 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CTEST_07870 recA; protein RecA K03553 recA; recombination protein RecA D CTEST_07440 ruvA; Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CTEST_07435 ruvB; Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CTEST_07445 ruvC; Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CTEST_07180 priA; replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CTEST_11540 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CTEST_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CTEST_05895 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CTEST_09515 recO; DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CTEST_01015 recR; DNA replication and repair protein RecR K06187 recR; recombination protein RecR D CTEST_06225 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CTEST_00045 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTEST_00025 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTEST_01310 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CTEST_03880 ATP-dependent DNA helicase, RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CTEST_08870 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CTEST_07745 lexA; SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CTEST_02545 DNA-directed DNA polymerase K14161 imuB; protein ImuB D CTEST_02580 dnaE2; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D CTEST_07865 hypothetical protein K03565 recX; regulatory protein D CTEST_10780 dinG; DNA helicase, Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CTEST_03620 Lhr-like helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CTEST_05860 fructose-2,6-bisphosphatase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D CTEST_06245 NTP pyrophosphohydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D CTEST_10825 nrdE1; ribonucleoside-diphosphate reductase class Ib alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTEST_10815 nrdF2; ribonucleoside-diphosphate reductase, class 1b, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CTEST_08055 exopolyphosphatase-like enzyme K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:cted03029] D CTEST_08070 infB; bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D CTEST_06070 infC; bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D CTEST_08305 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CTEST_01975 tuf; translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D CTEST_01970 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G D CTEST_09520 era; GTP-binding protein Era K03595 era; GTPase D CTEST_06180 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTEST_12925 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTEST_07335 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTEST_09490 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTEST_05190 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTEST_05530 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CTEST_05565 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CTEST_05525 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CTEST_12745 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_10435 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTEST_12115 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CTEST_12110 grpE; molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D CTEST_11775 groL2; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_02450 groL1; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_02445 groES; Co-chaperonin GroES K04078 groES; chaperonin GroES D CTEST_12105 dnaJ2; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CTEST_09550 dnaJ1; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CTEST_05450 iscS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTEST_04935 mrp; putative mrp family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CTEST_07050 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CTEST_07040 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CTEST_12630 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_13140 preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cted02000] D CTEST_08290 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CTEST_08295 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CTEST_12195 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CTEST_12200 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CTEST_04965 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CTEST_09640 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CTEST_08855 ATPase component of ABC transporters with duplicated ATPase domain K18230 tylC; macrolide transport system ATP-binding/permease protein D CTEST_03910 ATPase component of ABC transporters with duplicated ATPase domain K15738 uup; ABC transport system ATP-binding/permease protein D CTEST_06730 ABC-type multidrug transport system, ATPase and permease component K02021 ABC.MR; putative ABC transport system ATP-binding protein D CTEST_05220 molA; molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CTEST_05215 ABC-type sulfate transport system, permease component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CTEST_05655 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CTEST_05650 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15577 nrtB; nitrate/nitrite transport system permease protein D CTEST_05645 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CTEST_00290 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D CTEST_10345 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D CTEST_00285 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D CTEST_10340 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D CTEST_10335 fbpC1; ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CTEST_00280 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CTEST_12055 proX; ABC family glycine betaine transport, substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CTEST_12060 ABC-type proline/glycine betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D CTEST_12065 ABC-type proline/glycine betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D CTEST_12070 opuBA; ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CTEST_08270 ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CTEST_10645 msmX; ATPase component of ABC-type sugar transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CTEST_03035 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CTEST_10635 ABC-type sugar transport system, periplasmic component K25086 musE; maltose transport system substrate-binding protein D CTEST_10630 permease component of ABC-type sugar transporter K25087 musF; maltose transport system permease protein D CTEST_10625 ABC-type sugar transport system, permease component K25088 musG; maltose transport system permease protein D CTEST_02930 ABC-type sugar transport system, periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein D CTEST_08285 ABC-type sugar transport system, periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein D CTEST_02925 carbohydrate ABC transporter membrane protein 1, CUT1 family K10237 thuF; trehalose/maltose transport system permease protein D CTEST_08280 sugA; permease component of ABC-type sugar transporter K10237 thuF; trehalose/maltose transport system permease protein D CTEST_08275 carbohydrate ABC transporter membrane protein 2, CUT1 family K10238 thuG; trehalose/maltose transport system permease protein D CTEST_02920 carbohydrate ABC transporter membrane protein 2, CUT1 family K10238 thuG; trehalose/maltose transport system permease protein D CTEST_09720 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein D CTEST_09715 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D CTEST_09710 rbsA; monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CTEST_05025 monosaccharide ABC transporter substrate-binding protein, CUT2 family K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D CTEST_05030 rbsC; monosaccharide ABC transporter membrane protein, CUT2 family K02057 ABC.SS.P; simple sugar transport system permease protein D CTEST_05035 monosaccharide ABC transporter ATP-binding protein, CUT2 family K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D CTEST_11170 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D CTEST_11165 pstC2; phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D CTEST_11160 pstA1; phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D CTEST_11155 pstB; phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CTEST_10045 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CTEST_10035 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CTEST_10040 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CTEST_07850 gluB; L-glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D CTEST_07855 gluC; L-glutamate ABC transporter membrane protein K10006 gluC; glutamate transport system permease protein D CTEST_07860 gluD; L-glutamate ABC transporter membrane protein K10007 gluD; glutamate transport system permease protein D CTEST_07845 gluA; L-glutamate ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CTEST_00320 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D CTEST_02575 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D CTEST_00310 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D CTEST_02565 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D CTEST_00315 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D CTEST_02570 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D CTEST_06340 ABC-type putative transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D CTEST_06345 ABC-type putative transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein D CTEST_06350 ABC-type putative transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D CTEST_11900 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CTEST_05940 ABC superfamily ATP binding cassette transporter, binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CTEST_05935 amino acid ABC transporter membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein D CTEST_05930 aotP; amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CTEST_04720 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D CTEST_04725 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein D CTEST_04730 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein D CTEST_04735 dppD3; putative peptide ABC transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTEST_04755 ABC-type dipeptide transport system, periplasmic component K13889 gsiB; glutathione transport system substrate-binding protein D CTEST_04740 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K13890 gsiC; glutathione transport system permease protein D CTEST_04745 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K13891 gsiD; glutathione transport system permease protein D CTEST_04750 oligopeptide/dipeptide ABC transporter, ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D CTEST_01135 ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTEST_09680 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTEST_07415 dciAE; extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTEST_11480 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTEST_01140 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTEST_09685 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTEST_11485 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTEST_01145 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTEST_09690 appC; ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTEST_11490 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTEST_01150 putative ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTEST_09695 ABC superfamily ATP binding cassette transporter, ABC protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTEST_11495 ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTEST_00400 ABC-type hemin transport system, periplasmic component K25132 hmuT; heme transport system substrate-binding protein D CTEST_00405 ABC-type Fe3+-siderophore transport system, permease component K25133 hmuU; heme transport system permease protein D CTEST_00410 hmuV; ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D CTEST_02165 ABC-type Fe2+-enterobactin transport system, periplasmic component K23185 fepB; ferric enterobactin transport system substrate-binding protein D CTEST_08455 frgD; ABC-type Fe3+-hydroxamate transport system, periplasmic component K25286 fagD; iron-siderophore transport system substrate-binding protein D CTEST_02680 irp1A; ABC-type Fe3+-hydroxamate transport system, periplasmic component K25286 fagD; iron-siderophore transport system substrate-binding protein D CTEST_02180 ABC-type Fe3+-siderophore transport system, permease component K23186 fepD; iron-siderophore transport system permease protein D CTEST_02675 ABC-type Fe3+-siderophore transport system, permease component K23186 fepD; iron-siderophore transport system permease protein D CTEST_08450 fagA; ABC-type Fe3+-siderophore transport system, permease component K23186 fepD; iron-siderophore transport system permease protein D CTEST_02175 ABC-type enterobactin transport system, permease component K23187 fepG; iron-siderophore transport system permease protein D CTEST_02670 ABC-type enterobactin transport system, permease component K23187 fepG; iron-siderophore transport system permease protein D CTEST_08445 fagB; ABC-type enterobactin transport system, permease component K23187 fepG; iron-siderophore transport system permease protein D CTEST_02170 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CTEST_02665 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CTEST_08440 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CTEST_03430 ABC-type enterochelin transport system, periplasmic component K25282 yclQ; iron-siderophore transport system substrate-binding protein D CTEST_03440 feuC; ABC-type enterochelin transport system, permease component K25283 yclO; iron-siderophore transport system permease protein D CTEST_03435 feuB; ABC-type enterochelin transport system, permease component K25284 yclN; iron-siderophore transport system permease protein D CTEST_03445 ABC-type enterochelin transport system, ATPase component K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D CTEST_05425 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CTEST_09210 ATPase component of Mn/Zn ABC-type transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CTEST_05775 mtsC; anchored repeat-type ABC transporter, permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein D CTEST_05780 mntB; anchored repeat-type ABC transporter, ATP-binding subunit K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D CTEST_07880 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D CTEST_07890 ABC-type cobalt transport system, permease component CbiQ K16783 bioN; biotin transport system permease protein D CTEST_07885 ABC-type cobalt transport system, ATPase component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CTEST_04710 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D CTEST_04705 ABC superfamily ATP binding cassette transporter, ABC protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CTEST_04700 putative membrane protein K16925 ykoE; energy-coupling factor transport system permease protein D CTEST_09220 ABC-type metal ion transport system, periplasmic component/surface adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CTEST_00780 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D CTEST_00775 rfbE; ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CTEST_10160 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein D CTEST_08140 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein D CTEST_08135 ABC-2 family transporter protein K20460 nukE; lantibiotic transport system permease protein D CTEST_10155 ABC-2 family transporter protein K20460 nukE; lantibiotic transport system permease protein D CTEST_10150 hypothetical protein K20461 nukG; lantibiotic transport system permease protein D CTEST_08130 hypothetical protein K20461 nukG; lantibiotic transport system permease protein D CTEST_10075 ABC-2 family transporter protein K20491 nisE; lantibiotic transport system permease protein D CTEST_10070 ABC transporter K20490 nisF; lantibiotic transport system ATP-binding protein D CTEST_10875 MacB-like periplasmic core domain/FtsX-like permease family K09813 hrtB; hemin transport system permease protein D CTEST_10870 ABC-type antimicrobial peptide transport system, ATPase component K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CTEST_11325 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein D CTEST_11330 ABC-type multidrug transport system, ATPase component K25148 berA; beta-exotoxin I transport system ATP-binding protein D CTEST_13015 putative exporter of polyketide antibiotics K25149 narB; polyether ionophore transport system permease protein D CTEST_13010 ABC-type multidrug transport system, ATPase component K25150 narA; polyether ionophore transport system ATP-binding protein D CTEST_03375 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein D CTEST_03370 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CTEST_11880 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTEST_08225 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTEST_10925 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D CTEST_07035 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D CTEST_11885 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTEST_08230 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTEST_12680 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTEST_10930 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTEST_07030 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTEST_03675 FtsX-like permease family K02004 ABC.CD.P; putative ABC transport system permease protein D CTEST_02145 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D CTEST_01585 MacB-like periplasmic core domain/FtsX-like permease family K02004 ABC.CD.P; putative ABC transport system permease protein D CTEST_11025 ABC superfamily ATP binding cassette transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTEST_03680 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTEST_02140 macB; ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTEST_11030 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTEST_07005 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D CTEST_13055 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CTEST_00845 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CTEST_10320 di-/tricarboxylate transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CTEST_05705 arabinose efflux permease family protein K08155 SLC18A1_2; MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2 D CTEST_06805 arabinose efflux permease family protein K08155 SLC18A1_2; MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2 D CTEST_11875 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D CTEST_08050 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CTEST_04385 arabinose efflux permease family protein K05548 benK; MFS transporter, AAHS family, benzoate transport protein D CTEST_03875 cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D CTEST_05245 narK; nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CTEST_11870 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CTEST_02685 arabinose efflux permease family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CTEST_08155 arabinose efflux permease family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CTEST_11370 arabinose efflux permease family protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CTEST_01050 arabinose efflux permease family protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D CTEST_11605 lmrB2; drug resistance transporter, EmrB/QacA subfamily K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D CTEST_11995 Major Facilitator Superfamily transporter K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein D CTEST_12600 arabinose efflux permease family protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CTEST_11380 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family D CTEST_12715 sugar phosphate permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CTEST_07755 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CTEST_07770 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr D CTEST_05410 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_11505 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_05400 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CTEST_05395 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CTEST_11510 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CTEST_11560 scrA; PTS system sucrose-specific EIIBCA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CTEST_11725 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CTEST_01875 bglP; PTS system, glucose subfamily, IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CTEST_10675 bglF; beta-glucoside specific PTS system component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CTEST_06010 ptsM; PTS system mannose-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CTEST_07765 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CTEST_03275 K+ transport system, NAD-binding component K10716 kch; voltage-gated potassium channel D CTEST_08560 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D CTEST_03805 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D CTEST_05620 small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel D CTEST_10400 Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D CTEST_00840 Mg2+ transporter MgtE K06213 mgtE; magnesium transporter D CTEST_06445 corA; Mg2+/Co2+ transporter K03284 corA; magnesium transporter D CTEST_11015 hypothetical protein K06199 crcB; fluoride exporter D CTEST_11020 putative membrane protein K06199 crcB; fluoride exporter D CTEST_06420 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_04290 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_06425 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_04295 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_09530 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_04855 aroP; gamma-aminobutyrate permease-like transporter K16237 aroP; aromatic amino acid permease D CTEST_04225 lysI; transporter, basic amino acid/polyamine antiporter (APA) family K03758 arcD; arginine:ornithine antiporter / lysine permease D CTEST_00145 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D CTEST_04675 zupT; putative divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family D CTEST_12330 putative RND superfamily drug exporter K20470 mmpL3; trehalose monomycolate/heme transporter D CTEST_01695 cation/cationic drug transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D CTEST_10975 putative permease, DMT superfamily K15269 pecM; probable blue pigment (indigoidine) exporter D CTEST_08875 putative permease, DMT superfamily K11939 rhtA; inner membrane transporter RhtA D CTEST_08830 rarD protein K05786 rarD; chloramphenicol-sensitive protein RarD D CTEST_10455 putative permease K07084 yuiF; putative amino acid transporter D CTEST_10515 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D CTEST_06660 dcuA; anaerobic c4-dicarboxylate membrane transporter family protein K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D CTEST_00455 lldP; L-lactate transport K03303 lutP; lactate permease D CTEST_05115 putP; sodium/proline symporter K11928 putP; sodium/proline symporter D CTEST_03575 putative symporter K14393 actP; cation/acetate symporter D CTEST_12010 Na+/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CTEST_07525 Trk-type K+ transport system, membrane component K03498 trkH; trk/ktr system potassium uptake protein D CTEST_07520 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D CTEST_03525 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CTEST_03980 amino acid permease K03834 tyrP; tyrosine-specific transport protein D CTEST_10005 benzoate membrane transport protein K05782 benE; benzoate membrane transport protein D CTEST_04680 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family D CTEST_10900 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family D CTEST_10415 chromate transporter, chromate ion transporter family K07240 chrA; chromate transporter D CTEST_11655 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CTEST_03010 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter D CTEST_02955 arsenite efflux pump ACR3-like permease K03325 ACR3; arsenite transporter D CTEST_02800 arsenite efflux pump ACR3-like permease K03325 ACR3; arsenite transporter D CTEST_11795 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CTEST_01120 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CTEST_11800 multisubunit Na+/H+ antiporter, MnhC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CTEST_01115 multisubunit sodium/proton antiporter, MrpC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CTEST_11805 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CTEST_01110 mnhD; multisubunit sodium/proton antiporter, MrpD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CTEST_11810 multisubunit sodium/proton antiporter, MrpE subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CTEST_01105 multisubunit sodium/proton antiporter, MrpE subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CTEST_11815 multisubunit Na+/H+ antiporter, MnhF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CTEST_11820 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CTEST_13095 putative membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D CTEST_01755 putative permease K13936 mdcF; malonate transporter and related proteins D CTEST_05580 lysE; lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D CTEST_00650 putative threonine efflux protein K05835 rhtC; threonine efflux protein D CTEST_09820 putative threonine efflux protein K05835 rhtC; threonine efflux protein D CTEST_13070 putative branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump D CTEST_13065 putative branched-chain amino acid permease K26606 azlD; branched chain amino acid efflux pump D CTEST_13050 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D CTEST_13045 Tripartite tricarboxylate transporter TctB family K07794 tctB; putative tricarboxylic transport membrane protein D CTEST_13040 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CTEST_00950 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter D CTEST_09505 putative membrane protein K22736 VIT; vacuolar iron transporter family protein D CTEST_09230 putative membrane protein K22736 VIT; vacuolar iron transporter family protein D CTEST_08930 bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW D CTEST_05735 high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter D CTEST_05730 hypothetical protein K07224 efeO; iron uptake system component EfeO D CTEST_05725 Tat-translocated enzyme K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D CTEST_01715 cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D CTEST_05240 narG; respiratory nitrate reductase alpha subunit apoprotein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CTEST_05235 narH; respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CTEST_05225 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CTEST_12335 putative integral membrane protein K20468 K20468; putative heme transporter D CTEST_04210 feoB; ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B D CTEST_10620 Protein of unknown function, DUF624 K25089 musI; membrane protein D CTEST_07515 copper resistance protein CopC-like protein K07156 copC; copper resistance protein C C 02044 Secretion system [BR:cted02044] D CTEST_07300 type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CTEST_01260 helicase/secretion neighborhood ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CTEST_01265 type II secretion system protein F (GspF) K12510 tadB; tight adherence protein B D CTEST_08890 YGGT family protein K02221 yggT; YggT family protein D CTEST_09840 competence protein ComEA-like protein with helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA D CTEST_09835 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D CTEST_02335 type VII secretion protein EccCa/type VII secretion protein EccCb K27086 eccC; ESX secretion system protein EccC D CTEST_02330 type VII secretion integral membrane protein EccD K27087 eccD; ESX secretion system protein EccD D CTEST_02325 subtilase family protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CTEST_02345 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein D CTEST_02350 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein D CTEST_06385 secA2; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTEST_03165 secA1; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTEST_07425 secD; protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D CTEST_01850 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D CTEST_07420 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D CTEST_07085 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CTEST_02250 secY; protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D CTEST_08545 ffh; signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTEST_08565 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CTEST_07430 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CTEST_12630 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_13140 preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTEST_06595 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D CTEST_04930 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D CTEST_06590 tatC; twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:cted02042] D CTEST_06420 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_04290 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_06425 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_04295 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_09530 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTEST_11240 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:cted02022] D CTEST_01575 senX3; histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CTEST_01580 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CTEST_03790 mprB; signal transduction histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CTEST_03785 mprA; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D CTEST_03145 mtrB; signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CTEST_03140 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CTEST_11345 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CTEST_11350 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator D CTEST_08390 signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D CTEST_08395 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR C 02035 Bacterial motility proteins [BR:cted02035] D CTEST_07300 type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CTEST_01260 helicase/secretion neighborhood ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cted04812] D CTEST_08910 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CTEST_06255 hypothetical protein K03496 parA; chromosome partitioning protein D CTEST_13130 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein D CTEST_13125 parB; chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cted04147] D CTEST_04245 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTEST_04130 gapB; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTEST_07105 gap; glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTEST_07100 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTEST_08650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTEST_12515 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTEST_00170 ppiA; peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CTEST_11775 groL2; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_02450 groL1; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTEST_12115 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CTEST_03650 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTEST_02475 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CTEST_02480 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CTEST_01975 tuf; translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D CTEST_12565 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_01515 malate/lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTEST_13055 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CTEST_01535 fadD2; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_09590 fadD15; AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CTEST_11875 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D CTEST_00260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_09995 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTEST_02255 adk; adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CTEST_07410 apt; PRPP-binding protein, adenine/guanine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CTEST_06170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CTEST_06165 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CTEST_09295 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CTEST_05415 glgB; alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CTEST_12445 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CTEST_09185 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_09275 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTEST_01660 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CTEST_05665 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CTEST_03705 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CTEST_01445 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTEST_05445 etfA; electron transfer flavoprotein alpha subunit apoprotein K03522 fixB; electron transfer flavoprotein alpha subunit D CTEST_04090 gdhA; glutamate dehydrogenase/leucine dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CTEST_07065 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTEST_07095 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTEST_01570 gpmA; phosphoglycerate mutase, BPG-dependent, family 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTEST_00300 bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:cted02048] D CTEST_00490 hsdR2; type I restriction-modification system, restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D CTEST_06760 hsdR1; DNA restriction-modification system, restriction enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D CTEST_00510 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D CTEST_06755 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D CTEST_04305 N-6 DNA Methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CTEST_00515 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CTEST_06750 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CTEST_12530 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CTEST_12520 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CTEST_05255 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CTEST_12535 ATPase family protein associated with various cellular activities (AAA) K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D CTEST_00505 restriction endonuclease K07448 mrr; restriction system protein D CTEST_06780 Restriction endonuclease/Mrr N-terminal domain K07448 mrr; restriction system protein D CTEST_04550 toxin-antitoxin system, toxin component, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D CTEST_04555 prevent-host-death family protein K19159 yefM; antitoxin YefM D CTEST_12555 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CTEST_11825 phage shock protein C (PspC) family protein K03973 pspC; phage shock protein C D CTEST_04490 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D CTEST_08910 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CTEST_05810 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_00955 gluQ; tRNA synthetases class I (E and Q), catalytic domain K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTEST_05450 iscS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cted01504] D CTEST_01050 arabinose efflux permease family protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D CTEST_08855 ATPase component of ABC transporters with duplicated ATPase domain K18230 tylC; macrolide transport system ATP-binding/permease protein D CTEST_11995 Major Facilitator Superfamily transporter K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein D CTEST_11370 arabinose efflux permease family protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CTEST_05455 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D CTEST_02950 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cted03100] D CTEST_t00060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTEST_t10985 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTEST_t10990 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTEST_t00850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t00835 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t05180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t03590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t10445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTEST_t09430 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTEST_t11080 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CTEST_t11085 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CTEST_t07555 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CTEST_t04190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTEST_t05825 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTEST_t05830 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTEST_t05835 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTEST_t11090 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTEST_t07540 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t07565 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t07550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t10305 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t12240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTEST_t10475 tRNA-His K14226 tRNA-His; tRNA His D CTEST_t00055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTEST_t05980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t06735 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t10700 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t00220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t04265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTEST_t11135 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTEST_t10575 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTEST_t09425 tRNA-Met K14230 tRNA-Met; tRNA Met D CTEST_t03325 tRNA-Met K14230 tRNA-Met; tRNA Met D CTEST_t01840 tRNA-Met K14230 tRNA-Met; tRNA Met D CTEST_t11075 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CTEST_t01160 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTEST_t10300 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTEST_t06370 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTEST_t00930 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTEST_t00795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTEST_t00830 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTEST_t00985 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTEST_t01835 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTEST_t01335 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTEST_t11400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTEST_t01845 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CTEST_t01825 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CTEST_t07545 tRNA-Val K14237 tRNA-Val; tRNA Val D CTEST_t07560 tRNA-Val K14237 tRNA-Val; tRNA Val D CTEST_t07535 tRNA-Val K14237 tRNA-Val; tRNA Val D CTEST_t09350 tRNA-Val K14237 tRNA-Val; tRNA Val D CTEST_r06185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r11045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r12670 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r03450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTEST_r03455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r06190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r11040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r12665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTEST_r03460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r06195 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r11035 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_r12660 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTEST_00990 Bacterial small signal recognition particle RNA K01983 ffs; SRP RNA D CTEST_09305 Bacterial RNase P class A K01978 rnpB; M1 RNA D CTEST_03400 transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CTEST_01365 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D CTEST_00725 dprE2; short-chain dehydrogenase of unknown substrate specificity K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D CTEST_03565 aldo/keto reductase, diketogulonate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CTEST_05575 gpr; putative oxidoreductase, aryl-alcohol dehydrogenase like protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CTEST_00730 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D CTEST_01815 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D CTEST_02765 lpdA; dihydrolipoamide dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D CTEST_10250 Zn-dependent oxidoreductase, NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CTEST_07045 Zn-dependent oxidoreductase, NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CTEST_09420 Zn-dependent oxidoreductase, NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CTEST_08190 mtr; mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D CTEST_12585 msrA; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CTEST_07580 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CTEST_05590 putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D CTEST_07505 Dyp-type peroxidase family K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D CTEST_10610 bcp; Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CTEST_07380 tpx; peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CTEST_07715 ahpD; alkylhydroperoxidase, AhpD family K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D CTEST_07720 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D CTEST_03425 Dyp-type peroxidase family K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D CTEST_00620 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CTEST_09920 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CTEST_11635 hemoglobin-like flavoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CTEST_03655 hypothetical protein K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D CTEST_00380 ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2] D CTEST_11920 fprA2; NADPH-dependent glutamate synthase beta chain-like oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CTEST_12180 NADPH-dependent glutamate synthase beta chain-like oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CTEST_04760 glutaredoxin family protein, arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CTEST_03600 Glutaredoxin-like protein K18917 mrx1; mycoredoxin [EC:1.20.4.3] D CTEST_02995 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CTEST_12430 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CTEST_01945 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CTEST_06475 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CTEST_06495 methyltransferase, cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CTEST_11175 mshD; mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D CTEST_06545 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CTEST_00560 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D CTEST_11235 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D CTEST_12280 putative acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-] D CTEST_03510 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D CTEST_01540 mshA; D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D CTEST_08655 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CTEST_03075 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase K23155 crtEb; lycopene elongase/hydratase (flavuxanthin-forming) [EC:2.5.1.149] D CTEST_05890 putative kinase, dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CTEST_09270 glnE; glutamine synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CTEST_11545 disA; putative nucleic-acid-binding protein (contains the HHH domain) K07067 disA; diadenylate cyclase [EC:2.7.7.85] D CTEST_08170 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D CTEST_03000 protein-tyrosine-phosphatase K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D CTEST_03005 arsC1; protein-tyrosine-phosphatase K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D CTEST_02160 enterochelin esterase-like enzyme K23723 iroD; iron(III)-salmochelin esterase [EC:3.1.1.109] D CTEST_04980 carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CTEST_12370 Cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D CTEST_10425 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CTEST_09850 gpgP; fructose-2,6-bisphosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D CTEST_03890 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CTEST_05380 nucS; putative nuclease of the RecB family K07503 nucS; endonuclease [EC:3.1.-.-] D CTEST_04990 penicillin-binding protein, beta-lactamase class C K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D CTEST_11850 def2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CTEST_07175 def1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CTEST_04805 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D CTEST_04330 mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D CTEST_12080 putative amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CTEST_12895 putative sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CTEST_06690 mshC; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D CTEST_12355 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-] D CTEST_10805 copper/silver-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D CTEST_02970 ctpG; heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] C 99981 Carbohydrate metabolism D CTEST_00460 lutA; Cysteine-rich domain K18928 lldE; L-lactate dehydrogenase complex protein LldE D CTEST_00465 (4Fe-4S) cluster-containing protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D CTEST_00470 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D CTEST_02205 fdhD; formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D CTEST_06995 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins D CTEST_05440 etfB; electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D CTEST_04635 formate-dependent nitrite reductase, membrane component K04015 nrfD; protein NrfD D CTEST_10955 putative pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D CTEST_10465 cmrA; short-chain dehydrogenase of unknown substrate specificity K27306 cmrA; mycolic acid reductase C 99984 Nucleotide metabolism D CTEST_10830 nrdI; ribonucleoside-diphosphate reductase 2, operon protein nrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D CTEST_08900 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CTEST_03495 transglycosylase-like protein K21687 rpfA; resuscitation-promoting factor RpfA D CTEST_03895 hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB D CTEST_01385 glycosyl transferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase C 99987 Cofactor metabolism D CTEST_12140 putative p-aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein D CTEST_03365 putative p-aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D CTEST_06330 poly(3-hydroxybutyrate) depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase D CTEST_11435 poly(3-hydroxybutyrate) depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase C 99999 Others D CTEST_05600 putative membrane protein K15977 K15977; putative oxidoreductase D CTEST_03845 putative membrane protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CTEST_01295 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D CTEST_03500 cold shock protein K03704 cspA; cold shock protein D CTEST_08435 transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CTEST_10765 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CTEST_10295 tig; trigger factor K03545 tig; trigger factor D CTEST_03390 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D CTEST_10835 ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit K06191 nrdH; glutaredoxin-like protein NrdH D CTEST_08355 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D CTEST_01720 cytochrome C biosynthesis protein ResB K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D CTEST_04455 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D CTEST_08360 putative endonuclease related to Holliday junction resolvase K07460 yraN; putative endonuclease D CTEST_06640 RecB family exonuclease K07465 K07465; putative RecB family exonuclease D CTEST_08350 DNA protecting protein DprA K04096 smf; DNA processing protein D CTEST_07325 Recombination protein MgsA K07478 ycaJ; putative ATPase D CTEST_00100 transposase K18320 IS15; transposase, IS6 family D CTEST_10085 transposase K18320 IS15; transposase, IS6 family D CTEST_10135 transposase K18320 IS15; transposase, IS6 family D CTEST_10235 transposase K18320 IS15; transposase, IS6 family D CTEST_06740 transposase K18320 IS15; transposase, IS6 family D CTEST_06770 transposase K18320 IS15; transposase, IS6 family D CTEST_06785 tnp7109-52; DDE domain K18320 IS15; transposase, IS6 family D CTEST_06845 transposase K18320 IS15; transposase, IS6 family D CTEST_05045 transposase K07483 K07483; transposase D CTEST_01340 transposase K07483 K07483; transposase D CTEST_01920 transposase K07483 K07483; transposase D CTEST_05960 transposase K07483 K07483; transposase D CTEST_10050 transposase K07483 K07483; transposase D CTEST_06355 transposase K07483 K07483; transposase D CTEST_02630 transposase K07483 K07483; transposase D CTEST_06810 transposase K07483 K07483; transposase D CTEST_00475 transposase K07483 K07483; transposase D CTEST_06120 transposase K07493 K07493; putative transposase D CTEST_10545 transposase K07493 K07493; putative transposase D CTEST_08335 transposase K07493 K07493; putative transposase D CTEST_00235 PucR C-terminal helix-turn-helix domain K07494 K07494; putative transposase D CTEST_10210 Mu transposase/integrase K07497 K07497; putative transposase D CTEST_05050 transposase K07497 K07497; putative transposase D CTEST_01345 transposase K07497 K07497; putative transposase D CTEST_01910 transposase K07497 K07497; putative transposase D CTEST_01915 transposase K07497 K07497; putative transposase D CTEST_05965 transposase K07497 K07497; putative transposase D CTEST_10055 transposase K07497 K07497; putative transposase D CTEST_06360 transposase K07497 K07497; putative transposase D CTEST_02635 transposase K07497 K07497; putative transposase D CTEST_06815 transposase K07497 K07497; putative transposase D CTEST_00480 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CTEST_07895 phage shock protein A (PspA) family protein K03969 pspA; phage shock protein A D CTEST_01010 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CTEST_06270 amino acid/peptide transporter (peptide:H symporter) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CTEST_04480 SNF family Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CTEST_04065 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTEST_08580 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTEST_11010 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTEST_09660 brnQ; branched-chain amino acid uptake carrier K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CTEST_06505 putative Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CTEST_08525 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D CTEST_09175 putative permease K07085 K07085; putative transport protein D CTEST_02410 putative permease K07085 K07085; putative transport protein C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CTEST_11645 cstA; carbon starvation protein, predicted membrane protein K06200 cstA; carbon starvation protein D CTEST_04780 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D CTEST_06960 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D CTEST_09540 phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CTEST_04400 phoH; PhoH family protein K07175 phoH2; PhoH-like ATPase D CTEST_05750 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D CTEST_02135 hlyD; HlyD family secretion protein K02005 ABC.CD.TX; HlyD family secretion protein D CTEST_01380 hypothetical protein K09153 K09153; small membrane protein C 99994 Others D CTEST_11150 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D CTEST_05170 K+ transport flavoprotein K07222 K07222; putative flavoprotein involved in K+ transport D CTEST_03020 Pyridine nucleotide-disulfide oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D CTEST_11925 putative acyltransferase K02348 elaA; ElaA protein D CTEST_01290 helicase/secretion neighborhood putative DEAH-box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D CTEST_10405 truncated hemoglobin K06886 glbN; hemoglobin D CTEST_08095 putative RND superfamily drug exporter K06994 K06994; putative drug exporter of the RND superfamily D CTEST_00935 mmpL; putative RND superfamily drug exporter K06994 K06994; putative drug exporter of the RND superfamily D CTEST_12580 haloacid dehalogenase superfamily enzyme, subfamily IA K07025 K07025; putative hydrolase of the HAD superfamily D CTEST_00570 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D CTEST_07015 sufB; Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB D CTEST_07010 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D CTEST_00675 putative membrane protein K07058 K07058; membrane protein D CTEST_02710 putative membrane protein K07058 K07058; membrane protein D CTEST_06550 protein affecting phage T7 exclusion by the F plasmid K07113 fxsA; UPF0716 protein FxsA D CTEST_12795 putative sulfurtransferase K07146 K07146; UPF0176 protein D CTEST_12420 hypothetical protein K04750 phnB; PhnB protein D CTEST_01175 putative membrane-associated protein K03975 dedA; membrane-associated protein D CTEST_01305 putative membrane-associated protein K03975 dedA; membrane-associated protein D CTEST_07780 YhgE/Pip-like protein K01421 yhgE; putative membrane protein D CTEST_00820 putative membrane protein K08972 K08972; putative membrane protein D CTEST_05945 putative membrane protein K08974 K08974; putative membrane protein D CTEST_02610 putative membrane protein K08981 K08981; putative membrane protein D CTEST_07260 putative DUF1304 family protein K08987 K08987; putative membrane protein D CTEST_06375 hypothetical protein K09858 K09858; SEC-C motif domain protein D CTEST_09225 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D CTEST_12325 NYN domain K06860 K06860; putative heme uptake system protein D CTEST_09825 Ankyrin repeats (3 copies) K06867 K06867; uncharacterized protein D CTEST_09565 hypothetical protein K06867 K06867; uncharacterized protein D CTEST_10190 lysophospholipase K06889 K06889; uncharacterized protein D CTEST_09925 putative acetyltransferase K06975 K06975; uncharacterized protein D CTEST_11070 putative acetyltransferase K06975 K06975; uncharacterized protein D CTEST_00665 lactoylglutathione lyase family protein K06996 K06996; uncharacterized protein D CTEST_10450 lactoylglutathione lyase family protein K06996 K06996; uncharacterized protein D CTEST_10850 putative flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D CTEST_07340 putative metalloprotease K07054 K07054; uncharacterized protein D CTEST_00265 protein of unknown function DUF35 K07068 K07068; uncharacterized protein D CTEST_07240 putative TIGR01777 family protein K07071 K07071; uncharacterized protein D CTEST_05925 putative permease K07090 K07090; uncharacterized protein D CTEST_12145 putative permease K07090 K07090; uncharacterized protein D CTEST_00630 putative permease K07090 K07090; uncharacterized protein D CTEST_11640 putative phosphatase K07093 K07093; uncharacterized protein D CTEST_01165 putative phosphohydrolase K07098 K07098; uncharacterized protein D CTEST_09750 putative redox protein, regulator of disulfide bond formation K07112 K07112; uncharacterized protein D CTEST_04605 putative NADH-flavin reductase K07118 K07118; uncharacterized protein D CTEST_10980 putative NADH-flavin reductase K07118 K07118; uncharacterized protein D CTEST_00625 membrane protein AbrB duplication K07120 K07120; uncharacterized protein D CTEST_09955 putative DUF4143 family protein K07133 K07133; uncharacterized protein D CTEST_11610 putative membrane protein K07148 K07148; uncharacterized protein D CTEST_09315 Zn-ribbon protein, possibly nucleic acid-binding K07164 K07164; uncharacterized protein D CTEST_13145 hypothetical protein K08998 K08998; uncharacterized protein D CTEST_06400 hypothetical protein K08999 K08999; uncharacterized protein D CTEST_04255 hypothetical protein K09009 K09009; uncharacterized protein D CTEST_01170 hypothetical protein K09117 K09117; uncharacterized protein D CTEST_03320 hypothetical protein K09118 K09118; uncharacterized protein D CTEST_04770 hypothetical protein K09146 K09146; uncharacterized protein D CTEST_06965 hypothetical protein K09157 K09157; uncharacterized protein D CTEST_10095 hypothetical protein K09161 K09161; uncharacterized protein D CTEST_02605 hypothetical protein K09167 K09167; uncharacterized protein D CTEST_07915 hypothetical protein K09780 K09780; uncharacterized protein D CTEST_04685 hypothetical protein K09781 K09781; uncharacterized protein D CTEST_12935 hypothetical protein K09790 K09790; uncharacterized protein D CTEST_06175 hypothetical protein K09791 K09791; uncharacterized protein D CTEST_08105 hypothetical protein K09861 K09861; uncharacterized protein D CTEST_08075 putative nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024