+D GENES KO #

  KEGG Orthology (KO) - Chlamydia trachomatis F/SWFPminus

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ctfw00010] D SWFP_4061 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SWFP_2151 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SWFP_2171 pfkA_2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D SWFP_2271 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SWFP_3521 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D SWFP_5511 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SWFP_7561 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D SWFP_7871 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D SWFP_6341 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SWFP_3571 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SWFP_2621 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D SWFP_2631 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D SWFP_2641 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SWFP_7751 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:ctfw00020] D SWFP_0581 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D SWFP_0591 sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D SWFP_4301 sucB_1; lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SWFP_9041 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D SWFP_9031 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D SWFP_6391 sdhA; succinate dehydrogenase flavoprotein subunit (pseudogene) K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SWFP_6381 sdhB; succinate dehydrogenase iron-sulfur protein (pseudogene) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D SWFP_9401 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D SWFP_4041 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SWFP_7751 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D SWFP_2621 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D SWFP_2631 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D SWFP_2641 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ctfw00030] D SWFP_4061 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SWFP_1951 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D SWFP_1961 devB; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D SWFP_0691 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D SWFP_1271 araD; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D SWFP_8241 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D SWFP_3321 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D SWFP_2251 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D SWFP_2271 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SWFP_2151 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SWFP_2171 pfkA_2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D SWFP_1271 araD; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:ctfw00051] D SWFP_3141 mrsA; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D SWFP_2151 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SWFP_2171 pfkA_2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D SWFP_2271 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SWFP_3521 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D SWFP_2151 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:ctfw00500] D SWFP_5301 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D SWFP_8761 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D SWFP_9521 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D SWFP_2651 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D SWFP_0931 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D SWFP_0461 putative glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D SWFP_4061 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ctfw00520] D SWFP_8981 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D SWFP_8971 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D SWFP_6781 glmU; glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D SWFP_7801 UDP-N-acetylglucosamine pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D SWFP_4901 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SWFP_9141 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SWFP_4061 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SWFP_3141 mrsA; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D SWFP_5301 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:ctfw00620] D SWFP_2621 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D SWFP_2631 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D SWFP_2641 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SWFP_3571 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SWFP_2841 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D SWFP_1291 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D SWFP_1301 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D SWFP_3121 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D SWFP_4041 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SWFP_9401 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D SWFP_7751 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ctfw00630] D SWFP_4041 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SWFP_4661 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SWFP_3011 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:ctfw00640] D SWFP_3661 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SWFP_2841 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D SWFP_1291 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D SWFP_1301 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D SWFP_3121 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D SWFP_9031 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D SWFP_9041 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D SWFP_6391 sdhA; succinate dehydrogenase flavoprotein subunit (pseudogene) K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SWFP_6381 sdhB; succinate dehydrogenase iron-sulfur protein (pseudogene) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] C 00660 C5-Branched dibasic acid metabolism D SWFP_9031 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D SWFP_9041 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D SWFP_3521 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ctfw00190] D SWFP_6391 sdhA; succinate dehydrogenase flavoprotein subunit (pseudogene) K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SWFP_6381 sdhB; succinate dehydrogenase iron-sulfur protein (pseudogene) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D SWFP_0131 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D SWFP_0141 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D SWFP_3271 atpA; V-type ATP synthase alpha chain K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D SWFP_3261 atpB; V-type sodium ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D SWFP_3251 atpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D SWFP_3291 atpE; V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D SWFP_3241 atpI; V-type sodium ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D SWFP_3231 atpK; V-type sodium ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D SWFP_8481 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ctfw00710] D SWFP_7561 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D SWFP_5511 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SWFP_2271 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SWFP_8241 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D SWFP_2251 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D SWFP_3521 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D SWFP_1271 araD; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D SWFP_3321 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D SWFP_4041 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:ctfw00720] D SWFP_4041 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SWFP_9401 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D SWFP_6391 sdhA; succinate dehydrogenase flavoprotein subunit (pseudogene) K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SWFP_6381 sdhB; succinate dehydrogenase iron-sulfur protein (pseudogene) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D SWFP_9041 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D SWFP_9031 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D SWFP_2841 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D SWFP_1291 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D SWFP_1301 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D SWFP_3121 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D SWFP_0841 folD; methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] C 00680 Methane metabolism [PATH:ctfw00680] D SWFP_4661 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D SWFP_6341 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SWFP_4041 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SWFP_2271 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SWFP_2151 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SWFP_7871 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:ctfw00920] D SWFP_8501 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D SWFP_4691 Putative oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ctfw00061] D SWFP_2841 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D SWFP_1291 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D SWFP_1301 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D SWFP_3121 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D SWFP_2531 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D SWFP_2551 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D SWFP_2561 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D SWFP_8461 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SWFP_2541 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SWFP_5781 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D SWFP_1101 fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:ctfw00074] D SWFP_1061 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D SWFP_2531 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D SWFP_2551 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ctfw00561] D SWFP_8871 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D SWFP_8921 plsX; Fatty acid/phospholipid synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D SWFP_4881 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D SWFP_8511 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:ctfw00564] D SWFP_7791 gpdA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D SWFP_8871 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D SWFP_4881 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D SWFP_8511 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D SWFP_4861 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D SWFP_9081 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D SWFP_7621 psdD; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D SWFP_5371 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D SWFP_8751 pgsA_1; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D SWFP_1671 phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein (pseudogene) K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ctfw00230] D SWFP_2301 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D SWFP_0601 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D SWFP_5441 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D SWFP_6541 conserved hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D SWFP_0311 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D SWFP_9091 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SWFP_9101 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D SWFP_8251 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D SWFP_1341 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:ctfw00240] D SWFP_7391 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D SWFP_5441 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D SWFP_3751 conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D SWFP_1931 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D SWFP_4871 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D SWFP_2301 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D SWFP_0421 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D SWFP_9091 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SWFP_9101 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D SWFP_1981 tdk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D SWFP_3111 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ctfw00250] D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D SWFP_8981 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:ctfw00260] D SWFP_3901 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SWFP_3911 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SWFP_4661 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D SWFP_7871 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SWFP_3011 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D SWFP_9081 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D SWFP_1791 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D SWFP_1781 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ctfw00270] D SWFP_0601 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D SWFP_3901 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SWFP_3911 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D SWFP_4041 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:ctfw00280] D SWFP_8491 ldh; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D SWFP_3661 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ctfw00290] D SWFP_8491 ldh; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:ctfw00300] D SWFP_3901 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SWFP_3911 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SWFP_3891 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D SWFP_3921 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D SWFP_4641 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D SWFP_4191 dapL; DAP (diaminopimelic acid) aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D SWFP_2881 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D SWFP_8321 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ctfw00310] D SWFP_0591 sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D SWFP_4301 sucB_1; lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:ctfw00330] D SWFP_4011 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D SWFP_0591 sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D SWFP_4301 sucB_1; lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ctfw00400] D SWFP_4101 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D SWFP_3971 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D SWFP_3981 aroE; shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D SWFP_3951 aroL; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D SWFP_3941 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D SWFP_3961 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D SWFP_1791 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D SWFP_1781 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D SWFP_4081 phnP; metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ctfw00450] D SWFP_7501 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D SWFP_1051 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D SWFP_0331 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D SWFP_4661 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ctfw00470] D SWFP_8381 murC; UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SWFP_8341 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SWFP_4641 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:ctfw00480] D SWFP_0491 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D SWFP_0691 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D SWFP_1951 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ctfw00540] D SWFP_5771 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D SWFP_5791 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D SWFP_2601 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D SWFP_4411 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D SWFP_4321 Tetraacyldisaccharide-1-P 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D SWFP_4291 carbohydrate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D SWFP_7091 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D SWFP_1921 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D SWFP_2201 gseA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D SWFP_0101 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ctfw00541] D SWFP_3141 mrsA; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D SWFP_6781 glmU; glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:ctfw00550] D SWFP_4901 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SWFP_9141 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SWFP_8381 murC; UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SWFP_8341 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SWFP_2881 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D SWFP_8321 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D SWFP_4851 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D SWFP_8331 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SWFP_8371 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D SWFP_2891 pbp; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SWFP_5981 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ctfw00730] D SWFP_7861 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_2771 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_3561 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D SWFP_1341 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ctfw00740] D SWFP_7961 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D SWFP_7951 ribD; Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D SWFP_7971 ribH; Riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D SWFP_4351 ribC; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D SWFP_0991 ribF; riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D SWFP_2321 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:ctfw00760] D SWFP_2301 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:ctfw00770] D SWFP_5331 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D SWFP_1061 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:ctfw00780] D SWFP_8461 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SWFP_2541 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SWFP_5781 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D SWFP_1101 fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D SWFP_8531 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D SWFP_7901 birA; biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ctfw00785] D SWFP_6051 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D SWFP_5431 lplA_1; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D SWFP_3041 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SWFP_2621 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D SWFP_2631 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D SWFP_2641 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SWFP_0581 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D SWFP_0591 sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D SWFP_4301 sucB_1; lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D SWFP_3661 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SWFP_3011 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ctfw00790] D SWFP_6631 folX; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D SWFP_6621 folP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D SWFP_6611 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D SWFP_6601 conserved hypothetical protein K22099 folC2; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D SWFP_7961 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D SWFP_3511 trpC; N-(5'-phosphoribosyl)anthranilate isomerase K22100 trpF; 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one isomerase/dehydratase [EC:4.2.1.160] C 00670 One carbon pool by folate [PATH:ctfw00670] D SWFP_6611 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D SWFP_0841 folD; methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D SWFP_4661 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D SWFP_5761 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D SWFP_7021 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ctfw00860] D SWFP_4801 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SWFP_7171 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D SWFP_2221 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D SWFP_6841 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D SWFP_3181 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D SWFP_4671 conserved hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D SWFP_8181 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D SWFP_8171 hemN_1; coproporphyrinogen oxidase (NAD) K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D SWFP_8161 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D SWFP_5261 hemZ; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ctfw00130] D SWFP_2311 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D SWFP_2321 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D SWFP_4621 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D SWFP_4601 conserved hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D SWFP_8431 conserved hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ctfw00900] D SWFP_3561 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D SWFP_0771 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D SWFP_4971 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D SWFP_8841 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D SWFP_4681 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D SWFP_0611 gcpE; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D SWFP_9441 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D SWFP_2321 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D SWFP_6771 ispA; dimethylallyltransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D SWFP_4851 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D SWFP_8241 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:ctfw00261] D SWFP_3901 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SWFP_3911 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SWFP_3891 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D SWFP_3921 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D SWFP_2551 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D SWFP_2541 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SWFP_1101 fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D SWFP_2531 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D SWFP_3981 aroE; shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D SWFP_0911 putative decarboxylase K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D SWFP_2321 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ctfw03020] D SWFP_3341 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SWFP_3331 rpoC; DNA-directed RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SWFP_5531 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ctfw03010] D SWFP_1041 rpsA; SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D SWFP_7411 rpsB; SSU ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D SWFP_5681 rpsC; SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D SWFP_6751 rpsD; SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D SWFP_5581 rpsE; SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D SWFP_8811 rpsF; SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D SWFP_4721 rpsG; SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D SWFP_5611 rpsH; SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D SWFP_1321 rpsI; SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D SWFP_4701 rpsJ; SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D SWFP_5541 rpsK; SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D SWFP_4731 rpsL; SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D SWFP_5551 rpsM; SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D SWFP_8641 rpsN; SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D SWFP_9271 rpsO; SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D SWFP_0271 rpsP; SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D SWFP_5651 rpsQ; SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D SWFP_8821 rpsR; SSU ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D SWFP_5701 rpsS; SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D SWFP_6661 rpsT; SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D SWFP_3681 rpsU; SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D SWFP_3371 rplA; LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D SWFP_5711 rplB; LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D SWFP_5741 rplC; LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D SWFP_5731 rplD; LSU ribosomal protein L1E K02926 RP-L4; large subunit ribosomal protein L4 D SWFP_5621 rplE; LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D SWFP_5601 rplF; LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D SWFP_3351 rplL; LSU ribosomal protein L12P (L7/L12) K02935 RP-L7; large subunit ribosomal protein L7/L12 D SWFP_8831 rplI; LSU ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D SWFP_3361 rplJ; LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D SWFP_3381 rplK; LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D SWFP_1311 rplM; LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D SWFP_5641 rplN; LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D SWFP_5571 rplO; LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D SWFP_5671 rplP; LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D SWFP_5521 rplQ; LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D SWFP_5591 rplR; LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D SWFP_0291 rplS; LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D SWFP_9181 rplT; LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D SWFP_4511 rplU; LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D SWFP_5691 rplV; LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D SWFP_5721 rplW; LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D SWFP_5631 rplX; LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D SWFP_8791 rplY; LSU ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D SWFP_4501 rpmA; LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D SWFP_0921 rpmB; LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D SWFP_5661 rpmC; LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D SWFP_0231 rpmE; LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D SWFP_8911 rpmF; LSU ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D SWFP_1601 rpmG; LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D SWFP_8621 rnpA_1; ribonuclease P protein component K02914 RP-L34; large subunit ribosomal protein L34 D SWFP_9171 rpmI; LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D SWFP_8631 rpmJ; LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D SWFP_8071 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SWFP_8211 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SWFP_8081 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SWFP_8221 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SWFP_8091 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SWFP_8231 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ctfw00970] D SWFP_1901 tRNA_26; tRNA_26 K14218 tRNA-Ala; tRNA Ala D SWFP_6891 tRNA_33; tRNA_33 K14218 tRNA-Ala; tRNA Ala D SWFP_6511 tRNA_34; tRNA_34 K14219 tRNA-Arg; tRNA Arg D SWFP_7101 tRNA_28; tRNA_28 K14219 tRNA-Arg; tRNA Arg D SWFP_5071 tRNA_20; tRNA_20 K14219 tRNA-Arg; tRNA Arg D SWFP_0401 tRNA_1; tRNA_1 K14220 tRNA-Asn; tRNA Asn D SWFP_2351 tRNA_11; tRNA_11 K14221 tRNA-Asp; tRNA Asp D SWFP_8311 tRNA_17; tRNA_17 K14222 tRNA-Cys; tRNA Cys D SWFP_8771 tRNA_18; tRNA_18 K14223 tRNA-Gln; tRNA Gln D SWFP_8781 tRNA_20; tRNA_20 K14223 tRNA-Gln; tRNA Gln D SWFP_7371 tRNA_9; tRNA_9 K14224 tRNA-Glu; tRNA Glu D SWFP_7431 tRNA_14; tRNA_14 K14225 tRNA-Gly; tRNA Gly D SWFP_7721 tRNA_15; tRNA_15 K14225 tRNA-Gly; tRNA Gly D SWFP_8061 tRNA_16; tRNA_16 K14226 tRNA-His; tRNA His D SWFP_1891 tRNA_25; tRNA_25 K14227 tRNA-Ile; tRNA Ile D SWFP_9491 tRNA_37; tRNA_37 K14228 tRNA-Leu; tRNA Leu D SWFP_5491 tRNA_6; tRNA_6 K14228 tRNA-Leu; tRNA Leu D SWFP_5851 tRNA_35; tRNA_35 K14228 tRNA-Leu; tRNA Leu D SWFP_5121 tRNA_13; tRNA_13 K14228 tRNA-Leu; tRNA Leu D SWFP_5021 tRNA_12; tRNA_12 K14228 tRNA-Leu; tRNA Leu D SWFP_7351 tRNA_8; tRNA_8 K14229 tRNA-Lys; tRNA Lys D SWFP_2181 tRNA_31; tRNA_31 K14230 tRNA-Met; tRNA Met D SWFP_2191 tRNA_30; tRNA_30 K14230 tRNA-Met; tRNA Met D SWFP_3501 tRNA_29; tRNA_29 K14230 tRNA-Met; tRNA Met D SWFP_4521 tRNA_24; tRNA_24 K14231 tRNA-Phe; tRNA Phe D SWFP_0651 tRNA_2; tRNA_2 K14232 tRNA-Pro; tRNA Pro D SWFP_6821 tRNA_19; tRNA_19 K14232 tRNA-Pro; tRNA Pro D SWFP_9201 tRNA_36; tRNA_36 K14233 tRNA-Ser; tRNA Ser D SWFP_4451 tRNA_5; tRNA_5 K14233 tRNA-Ser; tRNA Ser D SWFP_5391 tRNA_21; tRNA_21 K14233 tRNA-Ser; tRNA Ser D SWFP_3841 tRNA_27; tRNA_27 K14233 tRNA-Ser; tRNA Ser D SWFP_7311 tRNA_7; tRNA_7 K14234 tRNA-Thr; tRNA Thr D SWFP_1491 tRNA_3; tRNA_3 K14234 tRNA-Thr; tRNA Thr D SWFP_3441 tRNA_22; tRNA_22 K14234 tRNA-Thr; tRNA Thr D SWFP_3411 tRNA_23; tRNA_23 K14235 tRNA-Trp; tRNA Trp D SWFP_1511 tRNA_4; tRNA_4 K14236 tRNA-Tyr; tRNA Tyr D SWFP_9121 tRNA_32; tRNA_32 K14237 tRNA-Val; tRNA Val D SWFP_2371 tRNA_10; tRNA_10 K14237 tRNA-Val; tRNA Val D SWFP_4801 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SWFP_0031 gatA; aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D SWFP_0041 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D SWFP_0021 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D SWFP_8201 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SWFP_5891 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SWFP_8741 glyQ; glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D SWFP_6281 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SWFP_7941 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SWFP_8581 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SWFP_0331 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SWFP_5761 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D SWFP_3211 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SWFP_2211 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SWFP_0201 ileS; isoleucyl-tRNA synthetase, mupirocin resistant K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SWFP_8571 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SWFP_4891 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SWFP_4221 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SWFP_5901 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SWFP_9191 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SWFP_5161 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SWFP_0681 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SWFP_6321 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ctfw03060] D SWFP_5561 secY; protein translocase subunit K03076 secY; preprotein translocase subunit SecY D SWFP_3401 secE; protein translocase subunit K03073 secE; preprotein translocase subunit SecE D SWFP_3781 secG; preprotein translocase K03075 secG; preprotein translocase subunit SecG D SWFP_4831 secF; protein translocase (secFG fusion protein) K12257 secDF; SecD/SecF fusion protein D SWFP_8121 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D SWFP_2681 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D SWFP_7641 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SWFP_0261 ffh; signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D SWFP_2731 SWFP_2731 K01983 ffs; SRP RNA D SWFP_9021 ftsY; Cell Division Protein K03110 ftsY; fused signal recognition particle receptor D SWFP_0211 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D SWFP_4381 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ctfw04122] D SWFP_7861 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_2771 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_3061 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:ctfw03018] D SWFP_6341 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SWFP_9261 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D SWFP_4261 vacB; exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D SWFP_5321 rho; transcription termination factor rho K03628 rho; transcription termination factor Rho D SWFP_2151 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SWFP_4251 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D SWFP_1161 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SWFP_7671 pcnB_1; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D SWFP_4401 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ctfw03030] D SWFP_5821 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_2801 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_5921 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SWFP_1971 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_3591 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_0511 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SWFP_0811 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SWFP_5411 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D SWFP_8711 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D SWFP_0481 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D SWFP_0301 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D SWFP_0081 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D SWFP_1561 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ctfw03410] D SWFP_7601 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D SWFP_6561 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D SWFP_1131 putative DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D SWFP_6741 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D SWFP_4821 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D SWFP_1561 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ctfw03420] D SWFP_8191 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D SWFP_3581 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D SWFP_6331 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D SWFP_8681 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D SWFP_6571 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SWFP_1561 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ctfw03430] D SWFP_8691 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D SWFP_6221 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D SWFP_6571 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SWFP_3531 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D SWFP_3541 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D SWFP_4821 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D SWFP_0481 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D SWFP_5921 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SWFP_0811 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SWFP_1971 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_3591 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_0511 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SWFP_5821 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_2801 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_1561 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ctfw03440] D SWFP_4821 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D SWFP_0481 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D SWFP_0801 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF D SWFP_5091 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D SWFP_2571 recR; recombination protein K06187 recR; recombination protein RecR D SWFP_7031 recA; recombinase A K03553 recA; recombination protein RecA D SWFP_5451 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D SWFP_0441 ruvB; Holliday junction ATP-dependent DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D SWFP_5461 ruvC; endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D SWFP_6921 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D SWFP_6931 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D SWFP_0341 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D SWFP_7051 recD_1; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D SWFP_5921 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SWFP_0811 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SWFP_1971 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_3591 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_0511 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SWFP_5821 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_2801 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_8541 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus D SWFP_8861 ptr; exported insulinase/protease (pseudogene) K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ctfw02010] D SWFP_4091 artJ; arginine transport substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D SWFP_1351 putative ABC-membrane transport protein, inner membrane component K17077 artQ; arginine/lysine/histidine transport system permease protein D SWFP_1361 ABC transporter, ATP-binding component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D SWFP_2081 oppA3; oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D SWFP_2091 oppB; oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D SWFP_2101 oppC; oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D SWFP_2121 oppF; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D SWFP_2111 oppD; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D SWFP_4461 metal transporter, metal-binding component K09815 znuA; zinc transport system substrate-binding protein D SWFP_4481 metal transporter, membrane permease component K09816 znuB; zinc transport system permease protein D SWFP_4471 metal transporter, ATP-binding component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D SWFP_0731 ABC transport protein, solute binding component K11707 troA; manganese/zinc/iron transport system substrate-binding protein D SWFP_0751 ABC transport protein, membrane permease K11708 troC; manganese/zinc/iron transport system permease protein D SWFP_0761 ABC transport protein, membrane permease K11709 troD; manganese/zinc/iron transport system permease protein D SWFP_0741 ABC transport protein, ATP-binding component K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D SWFP_3871 putative inner membrane protein K03523 bioY; biotin transport system substrate-specific component D SWFP_1611 lipoprotein releasing systen, inner membrane component K09808 lolC_E; lipoprotein-releasing system permease protein D SWFP_1621 lipoprotein release ATP-binding component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D SWFP_9231 putative membrane transport protein K07091 lptF; lipopolysaccharide export system permease protein D SWFP_9221 putative membrane transport protein K11720 lptG; lipopolysaccharide export system permease protein D SWFP_7071 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:ctfw02060] D SWFP_3611 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D SWFP_3621 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D SWFP_3091 PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D SWFP_3101 ptsN_2; PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ctfw03070] D SWFP_7291 Type III secretion structural protein (outer membrane ring) K03219 yscC; type III secretion protein C D SWFP_0951 lcrE; low calcium response protein E (TTSS effector protein) K04058 yscW; type III secretion protein W D SWFP_6061 sctJ; type III secretion system protein, membrane component K03222 yscJ; type III secretion protein J D SWFP_6091 sctR; type III secretion system, membrane protein K03226 yscR; type III secretion protein R D SWFP_6101 sctS; type III secretion system, membrane protein K03227 yscS; type III secretion protein S D SWFP_6111 sctT; type III secretion system, membrane protein K03228 yscT; type III secretion protein T D SWFP_0971 sctU; type III secretion system inner membrane protein K03229 yscU; type III secretion protein U D SWFP_0961 lcrD; low calcium response protein D (predicted to be part of the TTSS apparatus) K03230 yscV; type III secretion protein V D SWFP_7241 sctN; ATP synthase (predicted TTSS protein) K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D SWFP_6081 sctL; type III secretion system protein K03223 yscL; type III secretion protein L D SWFP_6191 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D SWFP_6171 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D SWFP_6181 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D SWFP_4831 secF; protein translocase (secFG fusion protein) K12257 secDF; SecD/SecF fusion protein D SWFP_3401 secE; protein translocase subunit K03073 secE; preprotein translocase subunit SecE D SWFP_3781 secG; preprotein translocase K03075 secG; preprotein translocase subunit SecG D SWFP_5561 secY; protein translocase subunit K03076 secY; preprotein translocase subunit SecY D SWFP_8121 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D SWFP_2681 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D SWFP_7641 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SWFP_9021 ftsY; Cell Division Protein K03110 ftsY; fused signal recognition particle receptor D SWFP_0261 ffh; signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:ctfw02020] D SWFP_9051 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D SWFP_0671 fliA; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D SWFP_2671 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D SWFP_2941 dnaA2; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D SWFP_5911 uhpC; putative sugar phosphate permease K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D SWFP_5041 atoS; two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D SWFP_5051 atoC; two component system response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D SWFP_6581 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D SWFP_0131 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D SWFP_0141 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ctfw02024] D SWFP_2281 xasA; glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D SWFP_7951 ribD; Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D SWFP_2081 oppA3; oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D SWFP_2091 oppB; oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D SWFP_2101 oppC; oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D SWFP_2121 oppF; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D SWFP_2111 oppD; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D SWFP_1451 oppA; oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SWFP_1831 oppA2; Oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SWFP_5211 oppA4; oligopeptide transport system, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SWFP_5201 oppB2; oligopeptide transport system membrane permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D SWFP_5191 oppC2; oligonucleotide transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D SWFP_7531 dppD; ABC transport protein, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D SWFP_7521 dppF; ABC transport protein, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein D SWFP_2681 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D SWFP_4831 secF; protein translocase (secFG fusion protein) K12257 secDF; SecD/SecF fusion protein D SWFP_3401 secE; protein translocase subunit K03073 secE; preprotein translocase subunit SecE D SWFP_3781 secG; preprotein translocase K03075 secG; preprotein translocase subunit SecG D SWFP_5561 secY; protein translocase subunit K03076 secY; preprotein translocase subunit SecY D SWFP_8121 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D SWFP_7641 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SWFP_9021 ftsY; Cell Division Protein K03110 ftsY; fused signal recognition particle receptor D SWFP_0261 ffh; signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D SWFP_7271 sctQ; Type III secretion component, basal body K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:ctfw02040] D SWFP_7841 fliF; flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D SWFP_7831 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D SWFP_7821 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D SWFP_7271 sctQ; Type III secretion component, basal body K02417 fliN; flagellar motor switch protein FliN D SWFP_0661 flhA; Flagellar biosynthesis protein (export) K02400 flhA; flagellar biosynthesis protein FlhA D SWFP_6641 rpoD; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D SWFP_6581 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D SWFP_0671 fliA; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D SWFP_6341 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ctfw01501] D SWFP_2081 oppA3; oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D SWFP_2091 oppB; oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D SWFP_2101 oppC; oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D SWFP_2121 oppF; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D SWFP_2111 oppD; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D SWFP_2891 pbp; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ctfw01502] D SWFP_8381 murC; UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SWFP_8321 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D SWFP_8331 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SWFP_8371 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ctfw01503] D SWFP_2871 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SWFP_9051 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D SWFP_5771 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ctfw01000] C 01001 Protein kinases [BR:ctfw01001] D SWFP_3201 pknD; Serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D SWFP_5961 rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D SWFP_5041 atoS; two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ctfw01009] D SWFP_2151 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SWFP_2781 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:ctfw01002] D SWFP_4381 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D SWFP_8981 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D SWFP_2711 inner membrane protein K07052 K07052; CAAX protease family protein D SWFP_1181 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D SWFP_8861 ptr; exported insulinase/protease (pseudogene) K01408 IDE; insulysin [EC:3.4.24.56] D SWFP_9061 metalloprotease-insulinase K06972 PITRM1; presequence protease [EC:3.4.24.-] D SWFP_0491 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D SWFP_9361 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D SWFP_6211 pepP; proline dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D SWFP_9251 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D SWFP_0781 putative protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D SWFP_9051 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D SWFP_5981 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D SWFP_7691 clpP_1; ATP-dependent Clp protease proteolytic component K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D SWFP_4651 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D SWFP_3701 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D SWFP_0211 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D SWFP_4751 tsp; carboxy-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:ctfw01003] D SWFP_8761 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ctfw01005] D SWFP_5771 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D SWFP_4411 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D SWFP_5791 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D SWFP_2601 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D SWFP_4321 Tetraacyldisaccharide-1-P 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D SWFP_0101 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D SWFP_2201 gseA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D SWFP_7091 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D SWFP_1921 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D SWFP_4291 carbohydrate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ctfw01011] D SWFP_4901 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SWFP_9141 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SWFP_8381 murC; UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SWFP_8341 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SWFP_2881 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D SWFP_8331 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SWFP_8371 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D SWFP_6731 mviN; putative virulence protein K03980 murJ; putative peptidoglycan lipid II flippase D SWFP_2891 pbp; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SWFP_5981 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D SWFP_2871 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ctfw01004] D SWFP_2551 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D SWFP_2561 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D SWFP_8461 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SWFP_2541 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SWFP_5781 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D SWFP_1101 fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D SWFP_8871 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D SWFP_8921 plsX; Fatty acid/phospholipid synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D SWFP_4881 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D SWFP_8511 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ctfw01006] D SWFP_6771 ispA; dimethylallyltransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D SWFP_4851 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D SWFP_8421 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D SWFP_2311 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:ctfw01007] D SWFP_4801 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SWFP_0681 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SWFP_6321 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SWFP_8581 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SWFP_4891 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SWFP_0331 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SWFP_0201 ileS; isoleucyl-tRNA synthetase, mupirocin resistant K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SWFP_3211 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SWFP_2211 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SWFP_8571 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SWFP_5891 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SWFP_5901 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SWFP_7941 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SWFP_4221 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SWFP_6281 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SWFP_8201 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SWFP_9191 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SWFP_5161 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SWFP_6901 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D SWFP_4191 dapL; DAP (diaminopimelic acid) aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D SWFP_8531 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D SWFP_2221 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ctfw03000] D SWFP_7901 birA; biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D SWFP_1771 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D SWFP_7511 parB; putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D SWFP_4231 Putative transcriptional regulatory protein K03705 hrcA; heat-inducible transcriptional repressor D SWFP_2231 conserved hypothetical protein K07735 algH; putative transcriptional regulator D SWFP_4371 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D SWFP_4361 transcriptional repressor K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:ctfw03021] D SWFP_5531 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D SWFP_3341 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SWFP_3331 rpoC; DNA-directed RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SWFP_6641 rpoD; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D SWFP_6581 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D SWFP_0671 fliA; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D SWFP_1031 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D SWFP_9151 nusB; Antitermination protein K03625 nusB; transcription antitermination protein NusB D SWFP_3391 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D SWFP_6351 rbsU; sigma regulatory family protein-PP2C phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D SWFP_8411 rbsV; anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist D SWFP_5961 rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D SWFP_4371 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D SWFP_5321 rho; transcription termination factor rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ctfw03019] D SWFP_8881 cafE; ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-] D SWFP_3161 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SWFP_4261 vacB; exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D SWFP_6341 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SWFP_9261 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D SWFP_5321 rho; transcription termination factor rho K03628 rho; transcription termination factor Rho D SWFP_2151 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SWFP_4251 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D SWFP_1161 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SWFP_7671 pcnB_1; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D SWFP_4401 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:ctfw03011] D SWFP_1041 rpsA; SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D SWFP_7411 rpsB; SSU ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D SWFP_5681 rpsC; SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D SWFP_6751 rpsD; SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D SWFP_5581 rpsE; SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D SWFP_8811 rpsF; SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D SWFP_4721 rpsG; SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D SWFP_5611 rpsH; SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D SWFP_1321 rpsI; SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D SWFP_4701 rpsJ; SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D SWFP_5541 rpsK; SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D SWFP_4731 rpsL; SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D SWFP_5551 rpsM; SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D SWFP_8641 rpsN; SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D SWFP_9271 rpsO; SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D SWFP_0271 rpsP; SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D SWFP_5651 rpsQ; SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D SWFP_8821 rpsR; SSU ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D SWFP_5701 rpsS; SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D SWFP_6661 rpsT; SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D SWFP_3681 rpsU; SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D SWFP_3371 rplA; LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D SWFP_5711 rplB; LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D SWFP_5741 rplC; LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D SWFP_5731 rplD; LSU ribosomal protein L1E K02926 RP-L4; large subunit ribosomal protein L4 D SWFP_5621 rplE; LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D SWFP_5601 rplF; LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D SWFP_8831 rplI; LSU ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D SWFP_3361 rplJ; LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D SWFP_3381 rplK; LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D SWFP_3351 rplL; LSU ribosomal protein L12P (L7/L12) K02935 RP-L7; large subunit ribosomal protein L7/L12 D SWFP_1311 rplM; LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D SWFP_5641 rplN; LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D SWFP_5571 rplO; LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D SWFP_5671 rplP; LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D SWFP_5521 rplQ; LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D SWFP_5591 rplR; LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D SWFP_0291 rplS; LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D SWFP_9181 rplT; LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D SWFP_4511 rplU; LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D SWFP_5691 rplV; LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D SWFP_5721 rplW; LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D SWFP_5631 rplX; LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D SWFP_4501 rpmA; LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D SWFP_0921 rpmB; LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D SWFP_5661 rpmC; LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D SWFP_0231 rpmE; LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D SWFP_8911 rpmF; LSU ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D SWFP_1601 rpmG; LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D SWFP_8621 rnpA_1; ribonuclease P protein component K02914 RP-L34; large subunit ribosomal protein L34 D SWFP_9171 rpmI; LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D SWFP_8631 rpmJ; LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D SWFP_8791 rplY; LSU ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D SWFP_8091 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SWFP_8231 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SWFP_8071 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SWFP_8211 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SWFP_8081 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SWFP_8221 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ctfw03009] D SWFP_3161 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SWFP_4491 putative nucleotide-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D SWFP_4371 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D SWFP_1031 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D SWFP_9151 nusB; Antitermination protein K03625 nusB; transcription antitermination protein NusB D SWFP_3391 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D SWFP_3801 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D SWFP_5281 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D SWFP_2911 mraW; S-adenosyl-L-methionine-dependent methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D SWFP_0521 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D SWFP_4341 N6-adenine-specific DNA methylase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D SWFP_7881 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D SWFP_1121 tRNA pseudouridine synthase A K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D SWFP_7131 sfhB; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SWFP_8881 cafE; ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-] D SWFP_1941 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D SWFP_7661 engA; GTP-binding protein K03977 engA; GTPase D SWFP_4071 putative nucleotide-binding protein K03665 hflX; GTPase D SWFP_1431 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D SWFP_1011 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D SWFP_8451 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D SWFP_4561 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D SWFP_0981 GTP-binding protein K06942 ychF; ribosome-binding ATPase D SWFP_8891 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ctfw03016] D SWFP_3721 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D SWFP_4801 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SWFP_4221 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SWFP_0201 ileS; isoleucyl-tRNA synthetase, mupirocin resistant K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SWFP_2211 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SWFP_0331 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SWFP_4891 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SWFP_8571 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SWFP_5891 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SWFP_8201 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SWFP_6281 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SWFP_7941 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SWFP_8581 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SWFP_3211 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SWFP_5901 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SWFP_9191 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SWFP_5161 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SWFP_0681 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SWFP_6321 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SWFP_4141 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D SWFP_9111 trmB; tRNA (m(7)G46) methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D SWFP_4981 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D SWFP_1001 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D SWFP_7861 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_2771 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_1431 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D SWFP_8421 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D SWFP_7611 trmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D SWFP_5421 gidA; tRNA uridine 5-carboxymethylase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D SWFP_8501 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D SWFP_8611 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D SWFP_4281 SWFP_4281 K01978 rnpB; M1 RNA D SWFP_8741 glyQ; glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D SWFP_9281 Cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D SWFP_6971 putative oxidoreductase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D SWFP_0281 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D SWFP_5871 putatve rRNA methylase (SpoU family) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D SWFP_4331 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D SWFP_3061 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D SWFP_2291 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D SWFP_2031 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D SWFP_9241 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D SWFP_2071 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D SWFP_5831 putative nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D SWFP_4261 vacB; exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D SWFP_9261 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ctfw03012] D SWFP_1021 infA; bacterial protein translation initiation factor 2 (IF-2) K02519 infB; translation initiation factor IF-2 D SWFP_9161 infC; bacterial protein translation initiation factor 3 (IF-3) K02520 infC; translation initiation factor IF-3 D SWFP_7401 tsf; translation elongation factor TS K02357 tsf; elongation factor Ts D SWFP_3421 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D SWFP_4711 fusA; translation elongation factor G K02355 fusA; elongation factor G D SWFP_0241 prfA; bacterial peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D SWFP_7381 rrf; ribosome recycling factor K02838 frr; ribosome recycling factor D SWFP_0251 peptide release factor-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D SWFP_8801 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D SWFP_3451 infA2; bacterial protein translation initiation factor 1 (IF-1) K02518 infA; translation initiation factor IF-1 D SWFP_1281 efp; translation elongation factor P K02356 efp; elongation factor P D SWFP_8261 efp_1; translation elongation factor P K02356 efp; elongation factor P D SWFP_4941 prfB; bacterial peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:ctfw03110] D SWFP_1191 clpB; chaperone-protease ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D SWFP_3051 clpC; ATP-dependent Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D SWFP_7681 clpX; ATP-dependent Clp protease, ATP-binding component K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D SWFP_4251 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D SWFP_1161 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SWFP_3671 dnaJ; heat shock chaperone protein K03686 dnaJ; molecular chaperone DnaJ D SWFP_4241 grpE; HSP-70 Cofactor K03687 GRPE; molecular chaperone GrpE D SWFP_1171 groES; 10 kDa chaperonin GroES K04078 groES; chaperonin GroES D SWFP_9051 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D SWFP_9251 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D SWFP_5861 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:ctfw04131] D SWFP_5441 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D SWFP_5511 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SWFP_7871 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D SWFP_3571 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:ctfw03032] D SWFP_2671 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D SWFP_2941 dnaA2; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D SWFP_5411 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D SWFP_8711 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D SWFP_0481 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D SWFP_5921 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SWFP_0811 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SWFP_0511 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SWFP_5821 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_2801 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_1971 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_3591 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_0301 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D SWFP_0081 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D SWFP_1561 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D SWFP_1991 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SWFP_7151 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SWFP_2001 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SWFP_7161 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SWFP_6961 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ctfw03036] D SWFP_3161 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SWFP_2671 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D SWFP_2941 dnaA2; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D SWFP_2891 pbp; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SWFP_8041 ftsK; Cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D SWFP_8361 ftsW; Cell division protein K03588 ftsW; cell division protein FtsW D SWFP_2871 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SWFP_7741 mreB; Cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D SWFP_7911 cell cycle protein K05837 rodA; rod shape determining protein RodA D SWFP_6291 minD; Chromosome partitioning ATPase (ParA family) K03496 parA; chromosome partitioning protein D SWFP_7511 parB; putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D SWFP_5421 gidA; tRNA uridine 5-carboxymethylase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D SWFP_3731 xerC; DNA recombination protein K03733 xerC; integrase/recombinase XerC D SWFP_9501 xerD; integrase/recombinase K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:ctfw03400] D SWFP_5181 putative DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SWFP_6561 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D SWFP_1131 putative DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D SWFP_7601 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D SWFP_3111 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D SWFP_6741 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D SWFP_4821 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D SWFP_1561 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D SWFP_3581 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D SWFP_6331 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D SWFP_8681 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D SWFP_6571 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SWFP_3341 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SWFP_3331 rpoC; DNA-directed RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SWFP_5531 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D SWFP_8191 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D SWFP_8691 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D SWFP_6221 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D SWFP_3531 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D SWFP_3541 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D SWFP_5921 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SWFP_0811 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SWFP_0511 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SWFP_5821 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_2801 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SWFP_1971 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_3591 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SWFP_0481 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D SWFP_6921 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D SWFP_6931 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D SWFP_0341 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D SWFP_7051 recD_1; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D SWFP_7031 recA; recombinase A K03553 recA; recombination protein RecA D SWFP_5451 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D SWFP_0441 ruvB; Holliday junction ATP-dependent DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D SWFP_5461 ruvC; endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D SWFP_8541 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D SWFP_3171 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms D SWFP_0801 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF D SWFP_5091 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D SWFP_2571 recR; recombination protein K06187 recR; recombination protein RecR D SWFP_1991 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SWFP_7151 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SWFP_2001 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SWFP_7161 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SWFP_6961 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D SWFP_9091 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SWFP_9101 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ctfw03029] D SWFP_1021 infA; bacterial protein translation initiation factor 2 (IF-2) K02519 infB; translation initiation factor IF-2 D SWFP_9161 infC; bacterial protein translation initiation factor 3 (IF-3) K02520 infC; translation initiation factor IF-3 D SWFP_7401 tsf; translation elongation factor TS K02357 tsf; elongation factor Ts D SWFP_3421 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D SWFP_4711 fusA; translation elongation factor G K02355 fusA; elongation factor G D SWFP_0681 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SWFP_2211 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SWFP_5891 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SWFP_4891 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SWFP_0031 gatA; aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D SWFP_0041 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D SWFP_0021 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D SWFP_0481 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D SWFP_2581 outer membrane protein (variable surface antigen) K07277 SAM50; outer membrane protein insertion porin family D SWFP_4251 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D SWFP_4241 grpE; HSP-70 Cofactor K03687 GRPE; molecular chaperone GrpE D SWFP_1161 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SWFP_1171 groES; 10 kDa chaperonin GroES K04078 groES; chaperonin GroES D SWFP_3671 dnaJ; heat shock chaperone protein K03686 dnaJ; molecular chaperone DnaJ D SWFP_7861 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_2771 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_2681 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ctfw02000] D SWFP_9391 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D SWFP_1881 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D SWFP_4091 artJ; arginine transport substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D SWFP_1351 putative ABC-membrane transport protein, inner membrane component K17077 artQ; arginine/lysine/histidine transport system permease protein D SWFP_1361 ABC transporter, ATP-binding component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D SWFP_5271 fliY; glutamine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D SWFP_2081 oppA3; oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D SWFP_2091 oppB; oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D SWFP_2101 oppC; oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D SWFP_2121 oppF; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D SWFP_2111 oppD; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D SWFP_1451 oppA; oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SWFP_1831 oppA2; Oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SWFP_5211 oppA4; oligopeptide transport system, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SWFP_5201 oppB2; oligopeptide transport system membrane permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D SWFP_5191 oppC2; oligonucleotide transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D SWFP_7531 dppD; ABC transport protein, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D SWFP_7521 dppF; ABC transport protein, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein D SWFP_4461 metal transporter, metal-binding component K09815 znuA; zinc transport system substrate-binding protein D SWFP_4481 metal transporter, membrane permease component K09816 znuB; zinc transport system permease protein D SWFP_4471 metal transporter, ATP-binding component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D SWFP_0731 ABC transport protein, solute binding component K11707 troA; manganese/zinc/iron transport system substrate-binding protein D SWFP_0751 ABC transport protein, membrane permease K11708 troC; manganese/zinc/iron transport system permease protein D SWFP_0761 ABC transport protein, membrane permease K11709 troD; manganese/zinc/iron transport system permease protein D SWFP_0741 ABC transport protein, ATP-binding component K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D SWFP_3871 putative inner membrane protein K03523 bioY; biotin transport system substrate-specific component D SWFP_9231 putative membrane transport protein K07091 lptF; lipopolysaccharide export system permease protein D SWFP_9221 putative membrane transport protein K11720 lptG; lipopolysaccharide export system permease protein D SWFP_7071 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D SWFP_1611 lipoprotein releasing systen, inner membrane component K09808 lolC_E; lipoprotein-releasing system permease protein D SWFP_1621 lipoprotein release ATP-binding component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D SWFP_7481 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D SWFP_5911 uhpC; putative sugar phosphate permease K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D SWFP_3611 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D SWFP_3621 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D SWFP_3091 PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D SWFP_3101 ptsN_2; PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D SWFP_2041 mgtE; magnesium transport protein K06213 mgtE; magnesium transporter D SWFP_6441 macromolecule transport protein K03559 exbD; biopolymer transport protein ExbD D SWFP_6431 exbB; macromolecule transporter K03562 tolQ; biopolymer transport protein TolQ D SWFP_2751 putative membrane transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SWFP_2761 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SWFP_4571 putative cation efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SWFP_7441 ompA; major outer membrane protein K03162 ompA; major outer membrane protein D SWFP_7781 ompB; outer membrane protein B K08719 K08719; outer membrane protein B D SWFP_2581 outer membrane protein (variable surface antigen) K07277 SAM50; outer membrane protein insertion porin family D SWFP_4021 Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D SWFP_2281 xasA; glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D SWFP_8991 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein D SWFP_9001 tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein D SWFP_9411 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D SWFP_6731 mviN; putative virulence protein K03980 murJ; putative peptidoglycan lipid II flippase D SWFP_1461 exported protein K09125 yhhQ; queuosine precursor transporter D SWFP_9371 putative integral membrane protein K05595 marC; multiple antibiotic resistance protein D SWFP_8361 ftsW; Cell division protein K03588 ftsW; cell division protein FtsW D SWFP_6471 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D SWFP_6461 tolB; outer membrane component of membrane transport system K03641 tolB; TolB protein C 02044 Secretion system [BR:ctfw02044] D SWFP_6191 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D SWFP_6181 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D SWFP_6171 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D SWFP_6981 integral membrane protein K02221 yggT; YggT family protein D SWFP_7291 Type III secretion structural protein (outer membrane ring) K03219 yscC; type III secretion protein C D SWFP_6061 sctJ; type III secretion system protein, membrane component K03222 yscJ; type III secretion protein J D SWFP_6081 sctL; type III secretion system protein K03223 yscL; type III secretion protein L D SWFP_7241 sctN; ATP synthase (predicted TTSS protein) K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D SWFP_6091 sctR; type III secretion system, membrane protein K03226 yscR; type III secretion protein R D SWFP_6101 sctS; type III secretion system, membrane protein K03227 yscS; type III secretion protein S D SWFP_6111 sctT; type III secretion system, membrane protein K03228 yscT; type III secretion protein T D SWFP_0971 sctU; type III secretion system inner membrane protein K03229 yscU; type III secretion protein U D SWFP_0961 lcrD; low calcium response protein D (predicted to be part of the TTSS apparatus) K03230 yscV; type III secretion protein V D SWFP_0951 lcrE; low calcium response protein E (TTSS effector protein) K04058 yscW; type III secretion protein W D SWFP_0661 flhA; Flagellar biosynthesis protein (export) K02400 flhA; flagellar biosynthesis protein FlhA D SWFP_7841 fliF; flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D SWFP_7831 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D SWFP_7821 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D SWFP_7271 sctQ; Type III secretion component, basal body K02417 fliN; flagellar motor switch protein FliN D SWFP_7641 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SWFP_4831 secF; protein translocase (secFG fusion protein) K12257 secDF; SecD/SecF fusion protein D SWFP_3401 secE; protein translocase subunit K03073 secE; preprotein translocase subunit SecE D SWFP_3781 secG; preprotein translocase K03075 secG; preprotein translocase subunit SecG D SWFP_5561 secY; protein translocase subunit K03076 secY; preprotein translocase subunit SecY D SWFP_0261 ffh; signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D SWFP_9021 ftsY; Cell Division Protein K03110 ftsY; fused signal recognition particle receptor D SWFP_8121 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D SWFP_2681 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:ctfw02042] D SWFP_2751 putative membrane transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SWFP_2761 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SWFP_4571 putative cation efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:ctfw02022] D SWFP_5041 atoS; two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D SWFP_5051 atoC; two component system response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:ctfw02035] D SWFP_7831 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D SWFP_7821 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D SWFP_0661 flhA; Flagellar biosynthesis protein (export) K02400 flhA; flagellar biosynthesis protein FlhA D SWFP_7271 sctQ; Type III secretion component, basal body K02417 fliN; flagellar motor switch protein FliN D SWFP_7841 fliF; flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D SWFP_0671 fliA; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ctfw04812] D SWFP_7741 mreB; Cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D SWFP_6291 minD; Chromosome partitioning ATPase (ParA family) K03496 parA; chromosome partitioning protein D SWFP_7511 parB; putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ctfw04147] D SWFP_6341 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SWFP_5511 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SWFP_7561 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D SWFP_3571 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SWFP_6501 ahpC; thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D SWFP_1161 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SWFP_4251 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D SWFP_4061 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SWFP_3421 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D SWFP_4141 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D SWFP_1341 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D SWFP_9521 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D SWFP_6841 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D SWFP_6041 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SWFP_1951 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D SWFP_3521 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D SWFP_7871 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ctfw02048] D SWFP_7741 mreB; Cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D SWFP_4801 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SWFP_7861 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SWFP_2771 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ctfw03100] D SWFP_1901 tRNA_26; tRNA_26 K14218 tRNA-Ala; tRNA Ala D SWFP_6891 tRNA_33; tRNA_33 K14218 tRNA-Ala; tRNA Ala D SWFP_6511 tRNA_34; tRNA_34 K14219 tRNA-Arg; tRNA Arg D SWFP_7101 tRNA_28; tRNA_28 K14219 tRNA-Arg; tRNA Arg D SWFP_5071 tRNA_20; tRNA_20 K14219 tRNA-Arg; tRNA Arg D SWFP_0401 tRNA_1; tRNA_1 K14220 tRNA-Asn; tRNA Asn D SWFP_2351 tRNA_11; tRNA_11 K14221 tRNA-Asp; tRNA Asp D SWFP_8311 tRNA_17; tRNA_17 K14222 tRNA-Cys; tRNA Cys D SWFP_8771 tRNA_18; tRNA_18 K14223 tRNA-Gln; tRNA Gln D SWFP_8781 tRNA_20; tRNA_20 K14223 tRNA-Gln; tRNA Gln D SWFP_7371 tRNA_9; tRNA_9 K14224 tRNA-Glu; tRNA Glu D SWFP_7431 tRNA_14; tRNA_14 K14225 tRNA-Gly; tRNA Gly D SWFP_7721 tRNA_15; tRNA_15 K14225 tRNA-Gly; tRNA Gly D SWFP_8061 tRNA_16; tRNA_16 K14226 tRNA-His; tRNA His D SWFP_1891 tRNA_25; tRNA_25 K14227 tRNA-Ile; tRNA Ile D SWFP_9491 tRNA_37; tRNA_37 K14228 tRNA-Leu; tRNA Leu D SWFP_5491 tRNA_6; tRNA_6 K14228 tRNA-Leu; tRNA Leu D SWFP_5851 tRNA_35; tRNA_35 K14228 tRNA-Leu; tRNA Leu D SWFP_5121 tRNA_13; tRNA_13 K14228 tRNA-Leu; tRNA Leu D SWFP_5021 tRNA_12; tRNA_12 K14228 tRNA-Leu; tRNA Leu D SWFP_7351 tRNA_8; tRNA_8 K14229 tRNA-Lys; tRNA Lys D SWFP_2181 tRNA_31; tRNA_31 K14230 tRNA-Met; tRNA Met D SWFP_2191 tRNA_30; tRNA_30 K14230 tRNA-Met; tRNA Met D SWFP_3501 tRNA_29; tRNA_29 K14230 tRNA-Met; tRNA Met D SWFP_4521 tRNA_24; tRNA_24 K14231 tRNA-Phe; tRNA Phe D SWFP_0651 tRNA_2; tRNA_2 K14232 tRNA-Pro; tRNA Pro D SWFP_6821 tRNA_19; tRNA_19 K14232 tRNA-Pro; tRNA Pro D SWFP_9201 tRNA_36; tRNA_36 K14233 tRNA-Ser; tRNA Ser D SWFP_4451 tRNA_5; tRNA_5 K14233 tRNA-Ser; tRNA Ser D SWFP_5391 tRNA_21; tRNA_21 K14233 tRNA-Ser; tRNA Ser D SWFP_3841 tRNA_27; tRNA_27 K14233 tRNA-Ser; tRNA Ser D SWFP_7311 tRNA_7; tRNA_7 K14234 tRNA-Thr; tRNA Thr D SWFP_1491 tRNA_3; tRNA_3 K14234 tRNA-Thr; tRNA Thr D SWFP_3441 tRNA_22; tRNA_22 K14234 tRNA-Thr; tRNA Thr D SWFP_3411 tRNA_23; tRNA_23 K14235 tRNA-Trp; tRNA Trp D SWFP_1511 tRNA_4; tRNA_4 K14236 tRNA-Tyr; tRNA Tyr D SWFP_9121 tRNA_32; tRNA_32 K14237 tRNA-Val; tRNA Val D SWFP_2371 tRNA_10; tRNA_10 K14237 tRNA-Val; tRNA Val D SWFP_8071 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SWFP_8211 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SWFP_8081 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SWFP_8221 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SWFP_8091 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SWFP_8231 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SWFP_2731 SWFP_2731 K01983 ffs; SRP RNA D SWFP_4281 SWFP_4281 K01978 rnpB; M1 RNA D SWFP_0191 SWFP_0191 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D SWFP_6591 conserved hypothetical protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D SWFP_8561 protein disulfide isomerase K01829 dsbH; disulfide reductase [EC:1.8.-.-] D SWFP_5801 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D SWFP_2691 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D SWFP_0831 apbE; thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D SWFP_7321 aspC_1; aspartate kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D SWFP_6411 putative hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D SWFP_3791 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D SWFP_5881 mip; peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D SWFP_6851 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D SWFP_2971 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D SWFP_2981 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D SWFP_2991 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D SWFP_3001 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D SWFP_8111 dmpP; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D SWFP_7921 cation transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D SWFP_7851 conserved hypothetical protein K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D SWFP_1421 putative phospholipase-carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D SWFP_7331 conserved hypothetical protein K19411 mcsA; protein arginine kinase activator D SWFP_7701 tig; trigger factor (chaperone) K03545 tig; trigger factor D SWFP_0821 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D SWFP_9071 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D SWFP_4051 ltuA; late transcription unit A protein K08274 ltuA; late transcription unit A protein D SWFP_0861 ltuB; late transcription unit B protein K08275 ltuB; late transcription unit B protein D SWFP_3601 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D SWFP_0711 ADP,ATP carrier protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D SWFP_5361 putative nucleotide transport protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D SWFP_7551 low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D SWFP_2481 sodium-dependent amino acid transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D SWFP_4311 gltT; Sodium:dicarboxylate symport protein K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D SWFP_8001 dagA; Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D SWFP_4391 Sodium/alanine symporter protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D SWFP_6011 brnQ; branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D SWFP_2141 sodium:sulfate symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D SWFP_0151 conserved hypothetical protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D SWFP_2591 ompH; Outer membrane protein K06142 hlpA; outer membrane protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D SWFP_7471 conserved hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB D SWFP_7491 conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D SWFP_1381 conserved hypothetical protein K07058 K07058; membrane protein D SWFP_4611 conserved hypothetical protein K07081 K07081; putative periplasmic solute-binding protein D SWFP_2811 conserved hypothetical protein K07083 K07083; putative periplasmic solute-binding protein D SWFP_6761 conserved hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D SWFP_3821 conserved hypothetical protein K06888 K06888; uncharacterized protein D SWFP_1591 putative exported protein K06889 K06889; uncharacterized protein D SWFP_2161 conserved hypothetical protein K06889 K06889; uncharacterized protein D SWFP_9011 putative membrane transport protein K06890 K06890; uncharacterized protein D SWFP_8391 conserved hypothetical protein K06960 K06960; uncharacterized protein D SWFP_7141 conserved hypothetical protein K06960 K06960; uncharacterized protein D SWFP_1471 protein translocase K07039 K07039; uncharacterized protein D SWFP_4961 putative metallo-phosphoesterase K07098 K07098; uncharacterized protein D SWFP_5291 putative phosphohydrolase K07099 K07099; uncharacterized protein D SWFP_8021 SET domain containing protein K07117 K07117; uncharacterized protein D SWFP_3471 conserved hypothetical protein K07125 K07125; uncharacterized protein D SWFP_4271 conserved hypothetical protein K07164 K07164; uncharacterized protein D SWFP_2241 conserved hypothetical protein K08999 K08999; uncharacterized protein D SWFP_4171 conserved hypothetical protein K09131 K09131; uncharacterized protein D SWFP_0011 putative membrane protein K09779 K09779; uncharacterized protein D SWFP_7541 conserved hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024