+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Acetivibrio thermocellus ATCC 27405

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ACRISPR-Cas system B Universal Cas proteins C Cthe_3218 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C Cthe_2297 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C Cthe_3219 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 C Cthe_2296 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D Cthe_2299 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Cthe_3204 CRISPR-associated HD domain protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D Cthe_2301 CRISPR-associated regulatory protein, DevR family K19075 cst2; CRISPR-associated protein Cst2 D Cthe_2298 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_3220 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_2300 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t D Cthe_2303 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-B factors D Cthe_3201 CRISPR-associated protein, Csh1 family K19114 csh1; CRISPR-associated protein Csh1 D Cthe_3202 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2 D Cthe_2298 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_3220 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_3203 CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h C Subtype I-C factors D Cthe_2298 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_3220 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D Cthe_2298 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_3220 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_2303 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors D Cthe_3211 protein of unknown function DUF324 K19134 csx10; CRISPR-associated protein Csx10 D Cthe_2053 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10 B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D Cthe_2298 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_3220 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors D Cthe_2054 protein of unknown function DUF324 K09002 csm3; CRISPR-associated protein Csm3 C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C Cthe_1144 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C Cthe_1145 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases D Cthe_1512 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] C DNA methyltransferases D Cthe_2470 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_1513 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_1728 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_1749 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_2320 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C Cthe_0518 Type III site-specific deoxyribonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] C Cthe_0519 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C Cthe_1641 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] C Cthe_1731 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D Cthe_2699 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Cthe_2501 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Cthe_2698 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB D Cthe_1462 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB D Cthe_0072 phage shock protein C, PspC K03973 pspC; phage shock protein C D Cthe_1057 phage shock protein C, PspC K03973 pspC; phage shock protein C C CcdB-CcdA C ParE-ParD C Doc-Phd C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D Cthe_0445 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Cthe_0088 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Cthe_2619 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C Cthe_1064 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C Cthe_0720 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023