+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Clostridium thermosuccinogenes

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E CDO33_08465 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D CDO33_01070 hypothetical protein K07192 FLOT; flotillin C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors D CDO33_04820 hypothetical protein K14440 SMARCAL1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-] # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D CDO33_00305 integration host factor subunit alpha K03530 hupB; DNA-binding protein HU-beta D CDO33_10930 integration host factor subunit alpha K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) C Other nucleoid associated proteins D CDO33_19785 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D CDO33_08970 RNA chaperone Hfq K03666 hfq; host factor-I protein D CDO33_19335 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D CDO33_08480 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D CDO33_07165 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A D CDO33_07170 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B C Divisome proteins D CDO33_09040 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D CDO33_00325 hypothetical protein K13052 divIC; cell division protein DivIC D CDO33_11265 ABC transporter K09812 ftsE; cell division transport system ATP-binding protein D CDO33_03075 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CDO33_07560 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CDO33_04365 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CDO33_06540 hypothetical protein K03586 ftsL; cell division protein FtsL D CDO33_09050 hypothetical protein K03589 ftsQ; cell division protein FtsQ D CDO33_06565 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D CDO33_02220 hypothetical protein K03588 ftsW; cell division protein FtsW D CDO33_11260 hypothetical protein K09811 ftsX; cell division transport system permease protein D CDO33_03080 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CDO33_09035 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CDO33_01095 cell division protein ZapA K09888 zapA; cell division protein ZapA D CDO33_00430 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDO33_15750 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDO33_03320 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDO33_16565 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDO33_04600 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDO33_09325 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C Inhibitors of FtsZ assembly D CDO33_15405 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CDO33_15400 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CDO33_15395 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CDO33_06900 cell division protein DivIVA K04074 divIVA; cell division initiation protein D CDO33_15980 cell division protein DivIVA K04074 divIVA; cell division initiation protein D CDO33_06885 cell division protein SepF K09772 sepF; cell division inhibitor SepF C Other chromosome partitioning proteins D CDO33_00215 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CDO33_15420 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CDO33_15415 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CDO33_15410 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CDO33_06525 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D CDO33_14025 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D CDO33_19750 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D CDO33_19830 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CDO33_14020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CDO33_19745 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CDO33_19820 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CDO33_19825 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CDO33_07675 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D CDO33_07130 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CDO33_17470 transposase K04763 xerD; integrase/recombinase XerD D CDO33_02920 integrase K04763 xerD; integrase/recombinase XerD D CDO33_20150 hypothetical protein K04763 xerD; integrase/recombinase XerD D CDO33_05290 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein D CDO33_15205 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024