+D
#
Spliceosome - Thermochaetoides thermophila
%
!
ACommon components
B Common spliceosomal components
C Cap binding complex
D CTHT_0061970 putative cap-binding protein K12882 NCBP1; nuclear cap-binding protein subunit 1
D CTHT_0022620 hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2
C hnRNP proteins
C SR proteins
C General mRNP proteins
D CTHT_0006960 RNA splicing factor (pad-1)-like protein K13091 RBM23_39; RNA-binding protein 23/39
#
AComplex A
B U1 snRNP components
C Sm proteins
D CTHT_0072980 putative RNA splicing factor K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D CTHT_0003330 putative small nuclear ribonucleoprotein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D CTHT_0065260 small nuclear ribonucleoprotein smD3-like protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D CTHT_0038260 small nuclear ribonucleoprotein E-like protein K11097 SNRPE; small nuclear ribonucleoprotein E
D CTHT_0005760 small nuclear ribonucleoprotein F-like protein K11098 SNRPF; small nuclear ribonucleoprotein F
D CTHT_0074540 putative small nuclear ribonucleoprotein K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D CTHT_0025670 U1 small nuclear ribonucleoprotein 70 kDa-like protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D CTHT_0051860 hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D CTHT_0071350 ATP-dependent RNA helicase-like protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D CTHT_0059960 hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
B U2 snRNP components
C Sm proteins
D CTHT_0072980 putative RNA splicing factor K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D CTHT_0003330 putative small nuclear ribonucleoprotein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D CTHT_0065260 small nuclear ribonucleoprotein smD3-like protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D CTHT_0038260 small nuclear ribonucleoprotein E-like protein K11097 SNRPE; small nuclear ribonucleoprotein E
D CTHT_0005760 small nuclear ribonucleoprotein F-like protein K11098 SNRPF; small nuclear ribonucleoprotein F
D CTHT_0074540 putative small nuclear ribonucleoprotein K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D CTHT_0034680 U2 small nuclear ribonucleoprotein A'-like protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D CTHT_0054050 U2 small nuclear ribonucleoprotein B'-like protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D CTHT_0011550 putative pre-mRNA splicing factor K12825 SF3A1; splicing factor 3A subunit 1
D CTHT_0034960 splicing factor 3a subunit 2-like protein K12826 SF3A2; splicing factor 3A subunit 2
D CTHT_0027610 RNA splicing factor PRP9-like protein K12827 SF3A3; splicing factor 3A subunit 3
D CTHT_0003510 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D CTHT_0006280 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D CTHT_0024090 putative pre-mRNA splicing protein K12830 SF3B3; splicing factor 3B subunit 3
D CTHT_0061980 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D CTHT_0012180 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D CTHT_0054490 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
C U2 related factors
D CTHT_0056140 putative splicing factor K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D CTHT_0003520 hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D CTHT_0005780 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D CTHT_0009560 hypothetical protein K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D CTHT_0042500 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D CTHT_0042700 hypothetical protein K12842 SR140; U2-associated protein SR140
B Other components
C Complex A specific factors
D CTHT_0034550 hypothetical protein K02180 BUB3; cell cycle arrest protein BUB3
D CTHT_0071000 hypothetical protein K08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]
D CTHT_0057890 hypothetical protein K13093 HTATSF1; HIV Tat-specific factor 1
D CTHT_0014120 hypothetical protein K13094 RBM5_10; RNA-binding protein 5/10
D CTHT_0068240 hypothetical protein K13095 SF1; splicing factor 1
#
AComplex B
B U1 snRNP components
C Sm proteins
D CTHT_0072980 putative RNA splicing factor K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D CTHT_0003330 putative small nuclear ribonucleoprotein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D CTHT_0065260 small nuclear ribonucleoprotein smD3-like protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D CTHT_0038260 small nuclear ribonucleoprotein E-like protein K11097 SNRPE; small nuclear ribonucleoprotein E
D CTHT_0005760 small nuclear ribonucleoprotein F-like protein K11098 SNRPF; small nuclear ribonucleoprotein F
D CTHT_0074540 putative small nuclear ribonucleoprotein K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D CTHT_0025670 U1 small nuclear ribonucleoprotein 70 kDa-like protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D CTHT_0051860 hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D CTHT_0071350 ATP-dependent RNA helicase-like protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D CTHT_0059960 hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
B U2 snRNP components
C Sm proteins
D CTHT_0072980 putative RNA splicing factor K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D CTHT_0003330 putative small nuclear ribonucleoprotein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D CTHT_0065260 small nuclear ribonucleoprotein smD3-like protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D CTHT_0038260 small nuclear ribonucleoprotein E-like protein K11097 SNRPE; small nuclear ribonucleoprotein E
D CTHT_0005760 small nuclear ribonucleoprotein F-like protein K11098 SNRPF; small nuclear ribonucleoprotein F
D CTHT_0074540 putative small nuclear ribonucleoprotein K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D CTHT_0034680 U2 small nuclear ribonucleoprotein A'-like protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D CTHT_0054050 U2 small nuclear ribonucleoprotein B'-like protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D CTHT_0011550 putative pre-mRNA splicing factor K12825 SF3A1; splicing factor 3A subunit 1
D CTHT_0034960 splicing factor 3a subunit 2-like protein K12826 SF3A2; splicing factor 3A subunit 2
D CTHT_0027610 RNA splicing factor PRP9-like protein K12827 SF3A3; splicing factor 3A subunit 3
D CTHT_0003510 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D CTHT_0006280 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D CTHT_0024090 putative pre-mRNA splicing protein K12830 SF3B3; splicing factor 3B subunit 3
D CTHT_0061980 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D CTHT_0012180 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D CTHT_0054490 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
C U2 related factors
D CTHT_0056140 putative splicing factor K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D CTHT_0003520 hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D CTHT_0005780 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D CTHT_0009560 hypothetical protein K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D CTHT_0042500 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D CTHT_0042700 hypothetical protein K12842 SR140; U2-associated protein SR140
B U4/U6.U5 tri-snRNP components
C Sm proteins
D CTHT_0072980 putative RNA splicing factor K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D CTHT_0003330 putative small nuclear ribonucleoprotein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D CTHT_0065260 small nuclear ribonucleoprotein smD3-like protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D CTHT_0038260 small nuclear ribonucleoprotein E-like protein K11097 SNRPE; small nuclear ribonucleoprotein E
D CTHT_0005760 small nuclear ribonucleoprotein F-like protein K11098 SNRPF; small nuclear ribonucleoprotein F
D CTHT_0074540 putative small nuclear ribonucleoprotein K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D CTHT_0003570 hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
D CTHT_0011670 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
D CTHT_0060100 U6 snrna-associated sm-like protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
C U4/U6 snRNP specific factors
D CTHT_0002950 putative U4/U6 small nuclear ribonucleoprotein K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3
D CTHT_0054790 hypothetical protein K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4
D CTHT_0058210 putative cis-trans protein K09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
D CTHT_0010050 putative RNA splicing factor K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31
D CTHT_0066810 hypothetical protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D CTHT_0047040 splicing factor (prp24)-like protein K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3
C U5 snRNP specific factors
D CTHT_0054900 116 kda u5 small nuclear ribonucleoprotein component-like protein K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D CTHT_0051060 pre-mRNA splicing factor prp1-like protein K12855 PRPF6; pre-mRNA-processing factor 6
D CTHT_0071250 putative pre-mRNA splicing factor K12856 PRPF8; pre-mRNA-processing factor 8
D CTHT_0047230 hypothetical protein K12857 SNRNP40; Prp8 binding protein
D CTHT_0009470 pre-mRNA splicing helicase-like protein K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D CTHT_0054430 hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
D CTHT_0027370 hypothetical protein K12859 TXNL4A; U5 snRNP protein, DIM1 family
D CTHT_0006180 hypothetical protein K13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2
C U4/U6.U5 tri-snRNP specific factors
D CTHT_0002250 putative RNA splicing factor K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
D CTHT_0065550 ubiquitin thiolesterase-like protein K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2
D CTHT_0028280 hypothetical protein K12846 SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3
C U4/U6.U5 tri-snRNP related factors
D CTHT_0013190 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D CTHT_0025210 putative pre-mRNA splicing protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D CTHT_0063660 putative mRNA splicing factor K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D CTHT_0070810 putative cis-trans protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D CTHT_0001850 ATP dependent RNA helicase (dob1)-like protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D CTHT_0064280 hypothetical protein K13104 ZNF830; zinc finger protein 830
B Other components
C Prp19 complex
D CTHT_0072540 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D CTHT_0038140 putative pre-mRNA splicing protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D CTHT_0052340 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D CTHT_0008910 putative pre-mRNA splicing protein K12862 PLRG1; pleiotropic regulator 1
D CTHT_0027480 putative pre-mRNA splicing protein K12863 CWC15; protein CWC15
D CTHT_0045540 hypothetical protein K12864 CTNNBL1; beta-catenin-like protein 1
D CTHT_0007430 heat shock protein 70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D CTHT_0058460 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D CTHT_0061180 hypothetical protein K06063 SNW1; SNW domain-containing protein 1
D CTHT_0033880 putative pre-mRNA splicing protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D CTHT_0024880 putative pre-mRNA splicing protein K12868 SYF2; pre-mRNA-splicing factor SYF2
D CTHT_0010060 hypothetical protein K12869 CRN; crooked neck
D CTHT_0071530 hypothetical protein K12874 AQR; intron-binding protein aquarius
D CTHT_0023130 putative bud site selection protein K12873 BUD31; bud site selection protein 31
D CTHT_0052020 hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D CTHT_0008120 putative pre-mRNA splicing protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D CTHT_0014950 putative cis-trans protein K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D CTHT_0006330 putative pre-mRNA splicing protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
D CTHT_0028670 putative pre-mRNA splicing protein K27398 CWC2; pre-mRNA-splicing factor CWC2
C RES complex
D CTHT_0029350 putative pre-mRNA splicing protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D CTHT_0011020 hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D CTHT_0017490 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C Complex B specific factors
D CTHT_0069660 hypothetical protein K13110 MFAP1; microfibrillar-associated protein 1
#
AComplex C
B U2 snRNP components
C Sm proteins
D CTHT_0072980 putative RNA splicing factor K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D CTHT_0003330 putative small nuclear ribonucleoprotein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D CTHT_0065260 small nuclear ribonucleoprotein smD3-like protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D CTHT_0038260 small nuclear ribonucleoprotein E-like protein K11097 SNRPE; small nuclear ribonucleoprotein E
D CTHT_0005760 small nuclear ribonucleoprotein F-like protein K11098 SNRPF; small nuclear ribonucleoprotein F
D CTHT_0074540 putative small nuclear ribonucleoprotein K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D CTHT_0003570 hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
C U2 SnRNP specific factors
D CTHT_0034680 U2 small nuclear ribonucleoprotein A'-like protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D CTHT_0054050 U2 small nuclear ribonucleoprotein B'-like protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D CTHT_0011550 putative pre-mRNA splicing factor K12825 SF3A1; splicing factor 3A subunit 1
D CTHT_0034960 splicing factor 3a subunit 2-like protein K12826 SF3A2; splicing factor 3A subunit 2
D CTHT_0027610 RNA splicing factor PRP9-like protein K12827 SF3A3; splicing factor 3A subunit 3
D CTHT_0003510 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D CTHT_0006280 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D CTHT_0024090 putative pre-mRNA splicing protein K12830 SF3B3; splicing factor 3B subunit 3
D CTHT_0061980 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D CTHT_0012180 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D CTHT_0054490 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
B U4/U6.U5 tri-snRNP components
C Sm proteins
D CTHT_0072980 putative RNA splicing factor K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D CTHT_0003330 putative small nuclear ribonucleoprotein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D CTHT_0065260 small nuclear ribonucleoprotein smD3-like protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D CTHT_0038260 small nuclear ribonucleoprotein E-like protein K11097 SNRPE; small nuclear ribonucleoprotein E
D CTHT_0005760 small nuclear ribonucleoprotein F-like protein K11098 SNRPF; small nuclear ribonucleoprotein F
D CTHT_0074540 putative small nuclear ribonucleoprotein K11099 SNRPG; small nuclear ribonucleoprotein G
C U5 SnRNP specific factors
D CTHT_0054900 116 kda u5 small nuclear ribonucleoprotein component-like protein K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D CTHT_0009470 pre-mRNA splicing helicase-like protein K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D CTHT_0051060 pre-mRNA splicing factor prp1-like protein K12855 PRPF6; pre-mRNA-processing factor 6
D CTHT_0071250 putative pre-mRNA splicing factor K12856 PRPF8; pre-mRNA-processing factor 8
D CTHT_0047230 hypothetical protein K12857 SNRNP40; Prp8 binding protein
D CTHT_0054430 hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
C U4/U6.U5 tri-SnRNP specific factors
D CTHT_0002250 putative RNA splicing factor K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
C U4/U6.U5 tri-SnRNP related factors
D CTHT_0013190 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D CTHT_0025210 putative pre-mRNA splicing protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D CTHT_0063660 putative mRNA splicing factor K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D CTHT_0070810 putative cis-trans protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D CTHT_0001850 ATP dependent RNA helicase (dob1)-like protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D CTHT_0064280 hypothetical protein K13104 ZNF830; zinc finger protein 830
D CTHT_0005780 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D CTHT_0020180 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
B Other components
C Prp19-CDC5 complex
D CTHT_0072540 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D CTHT_0038140 putative pre-mRNA splicing protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D CTHT_0052340 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D CTHT_0045540 hypothetical protein K12864 CTNNBL1; beta-catenin-like protein 1
D CTHT_0027480 putative pre-mRNA splicing protein K12863 CWC15; protein CWC15
D CTHT_0008910 putative pre-mRNA splicing protein K12862 PLRG1; pleiotropic regulator 1
D CTHT_0007430 heat shock protein 70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D CTHT_0058460 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D CTHT_0061180 hypothetical protein K06063 SNW1; SNW domain-containing protein 1
D CTHT_0033880 putative pre-mRNA splicing protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D CTHT_0024880 putative pre-mRNA splicing protein K12868 SYF2; pre-mRNA-splicing factor SYF2
D CTHT_0010060 hypothetical protein K12869 CRN; crooked neck
D CTHT_0071530 hypothetical protein K12874 AQR; intron-binding protein aquarius
D CTHT_0023130 putative bud site selection protein K12873 BUD31; bud site selection protein 31
D CTHT_0052020 hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D CTHT_0008120 putative pre-mRNA splicing protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D CTHT_0014950 putative cis-trans protein K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D CTHT_0006330 putative pre-mRNA splicing protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
C RES complex
D CTHT_0029350 putative pre-mRNA splicing protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D CTHT_0011020 hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D CTHT_0017490 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C EJC/TREX
D CTHT_0012740 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D CTHT_0027620 ATP-dependent RNA helicase-like protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D CTHT_0043830 hypothetical protein K25178 CCDC174; coiled-coil domain-containing protein 174
D CTHT_0073330 putative RNA binding protein K12876 RBM8A; RNA-binding protein 8A
D CTHT_0071520 hypothetical protein K12878 THOC1; THO complex subunit 1
D CTHT_0037990 putative THO complex protein K12879 THOC2; THO complex subunit 2
D CTHT_0010010 WD40 repeat-containing protein K12880 THOC3; THO complex subunit 3
D CTHT_0005620 putative RNA annealing protein K12881 THOC4; THO complex subunit 4
D CTHT_0067200 putative RNA binding protein K12881 THOC4; THO complex subunit 4
C Step II factors
D CTHT_0017830 hypothetical protein K12816 CDC40; pre-mRNA-processing factor 17
D CTHT_0024370 putative pre-mRNA splicing factor K12817 PRPF18; pre-mRNA-splicing factor 18
D CTHT_0011780 putative pre-mRNA splicing protein K12819 SLU7; pre-mRNA-processing factor SLU7
D CTHT_0035640 putative pre-mRNA splicing factor K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D CTHT_0009880 pre-mRNA splicing factor ATP-dependent RNA helicase prp16-like protein K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
C PPlases
D CTHT_0005270 putative cis-trans protein K12734 PPIL3; peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8]
D CTHT_0041950 peptidyl-prolyl cis-trans isomerase-like protein K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]
D CTHT_0059490 peptidyl-prolyl cis-trans isomerase-like protein K12736 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
D CTHT_0005290 hypothetical protein K12737 SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]
C hnRNP proteins
C Complex C specific factors
D CTHT_0040600 putative mRNA splicing protein K13115 CCDC130; coiled-coil domain-containing protein 130
D CTHT_0002590 ATP-dependent helicase-like protein K13117 DHX35; ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
D CTHT_0067690 hypothetical protein K13118 DGCR14; protein DGCR14
D CTHT_0031710 hypothetical protein K13119 FAM50; protein FAM50
D CTHT_0061400 hypothetical protein K13120 FAM32A; protein FAM32A
D CTHT_0054990 hypothetical protein K13122 FRG1; protein FRG1
D CTHT_0041140 hypothetical protein K13123 GPATCH1; G patch domain-containing protein 1
D CTHT_0065610 hypothetical protein K13124 MORG1; mitogen-activated protein kinase organizer 1
D CTHT_0026000 hypothetical protein K13125 NOSIP; nitric oxide synthase-interacting protein
D CTHT_0042990 hypothetical protein K13126 PABPC; polyadenylate-binding protein
D CTHT_0011950 hypothetical protein K13126 PABPC; polyadenylate-binding protein
D CTHT_0011920 putative pre-mRNA splicing protein K13127 RNF113A; RING finger protein 113A
D CTHT_0020180 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
D CTHT_0074270 hypothetical protein K25058 CACTIN; cactin
D CTHT_0002620 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
D CTHT_0002440 hypothetical protein K26159 PRKRIP1; PRKR-interacting protein 1
#
AOther splicing related proteins
B Proteins involved in snRNP biogenesis
C SMN complex factors
D CTHT_0004040 hypothetical protein K13137 STRAP; serine-threonine kinase receptor-associated protein
C Integrator complex
C Other proteins involved in snRNP biogenesis
D CTHT_0042500 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D CTHT_0058540 hypothetical protein K23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
D CTHT_0069540 hypothetical protein K05019 CLNS1A; chloride channel, nucleotide-sensitive, 1A
D CTHT_0067390 hypothetical protein K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]
D CTHT_0005220 zinc finger domain-containing protein K06874 ZPR1; zinc finger protein ZPR1
B Minor spliceosome components
C Minor spliceosome specific factors
C Minor spliceosome associated proteins
D CTHT_0070810 putative cis-trans protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
B Spliceosome associated proteins (SAPs)
C hnRNP proteins
C SR proteins
C SR-related proteins
D CTHT_0056660 hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1
D CTHT_0005910 hypothetical protein K13172 SRRM2; serine/arginine repetitive matrix protein 2
C TREX complex
D CTHT_0071520 hypothetical protein K12878 THOC1; THO complex subunit 1
D CTHT_0037990 putative THO complex protein K12879 THOC2; THO complex subunit 2
D CTHT_0010010 WD40 repeat-containing protein K12880 THOC3; THO complex subunit 3
D CTHT_0005620 putative RNA annealing protein K12881 THOC4; THO complex subunit 4
D CTHT_0067200 putative RNA binding protein K12881 THOC4; THO complex subunit 4
D CTHT_0056350 hypothetical protein K13174 THOC5; THO complex subunit 5
D CTHT_0012740 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
C RNA helicase-like proteins
D CTHT_0012670 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D CTHT_0065070 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D CTHT_0000650 ATP-dependent RNA helicase-like protein K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D CTHT_0022270 hypothetical protein K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
C RNA binding proteins (RBPs)
D CTHT_0033710 RNA recognition motif-containing protein K13192 RBM26; RNA-binding protein 26
D CTHT_0022330 hypothetical protein K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D CTHT_0071140 putative polyadenylated RNA protein K13201 TIA1; nucleolysin TIA-1/TIAR
D CTHT_0040560 hypothetical protein K20100 YTHDC1; YTH domain-containing protein 1
C Other SAPs
D CTHT_0071330 hypothetical protein K13205 AAR2; A1 cistron-splicing factor AAR2
D CTHT_0033470 hypothetical protein K09528 DNAJC8; DnaJ homolog subfamily C member 8
D CTHT_0000680 hypothetical protein K13210 FUBP; far upstream element-binding protein
D CTHT_0053250 serine/threonine protein phosphatase-like protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D CTHT_0069360 serine/threonine protein phosphatase-like protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D CTHT_0005770 putative shk1 kinase-binding protein K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]
D CTHT_0030760 hypothetical protein K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
D CTHT_0054140 hypothetical protein K13217 PRPF39; pre-mRNA-processing factor 39
D CTHT_0038670 hypothetical protein K23966 CCNL; cyclin L
D CTHT_0006420 hypothetical protein K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
D CTHT_0072860 hypothetical protein K24939 CWF19L1; CWF19-like protein 1
D CTHT_0035950 hypothetical protein K24940 CWF19L2; CWF19-like protein 2
#
ASplicing related RNAs
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 3, 2024