+E Transcription factors KO
#
Transcription Factors - Cupriavidus taiwanensis
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D RALTA_B1715 putative HTH transcriptional regulator; AraC family K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D RALTA_B0761 putative transcriptional regulator, AraC family K21747 alkR; AraC family transcriptional regulator, alkane utilization regulator
D RALTA_B2299 putative transcription regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D RALTA_B1646 putative transcriptional Regulator, AraC K07506 K07506; AraC family transcriptional regulator
D RALTA_B0916 ada; O6-methylguanine-DNA methyltransferase; transcriptional regulator of DNA repair (AraC/Xyl family) (N-terminal); bifunctional K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RALTA_B2282 Putative methylated-DNA-protein-cysteine methyltransferase, DNA binding domain K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
C LysR family
D RALTA_A0060 gcvA2; transcriptional regulator of Glycine cleavage system operon, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_A1648 gcvA1; transcriptional regulator of glycine cleavage system operon, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_B2244 putative transcription regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_A1096 putative transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_B1437 putative transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_B1322 putative transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_A3106 putative transcriptional Regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_B0699 phnR; transcriptional activator; LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_A2567 putative transcription regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RALTA_B1419 metR; transcriptional regulator of methionine biosynthesis (LysR family) K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D RALTA_A2585 oxyR; Hydrogen peroxide-inducible gene activator; Transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RALTA_A2475 cysB; transcriptional regulator of biosynthesis of L-cysteine and regulator of sulfur assimilation (LysR family) K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D RALTA_A1775 cbl; transcriptional regulator of cysteine biosynthesis and aliphatic sulfonates utilization; LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D RALTA_B1211 putative transcriptional regulator, LysR family K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D RALTA_B0708 Putative transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D RALTA_B1818 putative transcriptional regulator, lysR K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D pRALTA_0364 nodD; NodD transcriptional regulator; lysR family K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator
D RALTA_B0890 TRANSCRIPTION REGULATOR; putative ttuA activator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D RALTA_B1464 putative transcriptional regulator, LysR family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D RALTA_B0064 putative transcriptional regulator, LysR family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D RALTA_A0572 putative Transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D RALTA_A2619 phcA; transcriptional regulator, LysR family K19624 phcA; LysR family transcriptional regulator, virulence genes transcriptional regulator
D RALTA_A3204 putative transcriptional Regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RALTA_A0426 putative TRANSCRIPTIONal REGULATOR, lysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RALTA_B1703 cbbR; HTH-type transcriptional regulator cfxR (RuBisCO operon transcriptional regulator; LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RALTA_B1500 transcriptional regulator; similar to cbbR, activator of RUBISCO operon K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RALTA_B1068 putative transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RALTA_B0096 putative transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RALTA_B0679 putative Transcriptional Regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RALTA_B0375 Putative transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
C DeoR family
D RALTA_A2007 glpR; Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RALTA_B1647 putative transcriptional regulator, DeoR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
C LacI family
D RALTA_A0573 putative transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RALTA_B1404 putative transcriptional regulator, lacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
C GntR family
D RALTA_B1192 phnF; transcriptional regulator, GntR family; putative regulator for phosphonate uptake and biodegradation system K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D RALTA_A0655 hutC2; transcriptional regulator, gntR family; putative HISTIDINE UTILIZATION REPRESSOR TRANSCRIPTION REGULATOR PROTEIN K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RALTA_A2493 hutC1; HISTIDINE UTILIZATION REPRESSOR, TRANSCRIPTIONal REGULATOR GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RALTA_A0253 putative transcriptional regulator, GntR family, small molecule-binding UbiC domain K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D RALTA_B0331 putative transcriptional regulator, GntR, UbiC domains K03710 K03710; GntR family transcriptional regulator
D RALTA_B1331 putative transcriptional regulator, GntR:UbiC family K03710 K03710; GntR family transcriptional regulator
D RALTA_A2132 putative TRANSCRIPTION REGULATOR PROTEIN; GntR family K03710 K03710; GntR family transcriptional regulator
D RALTA_B0055 Putative HTH-type transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D RALTA_B0383 Putative transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D RALTA_B2018 putative transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D RALTA_B0752 putative transcriptional regulator; GntR family K03710 K03710; GntR family transcriptional regulator
D RALTA_B0844 putative TRANSCRIPTIONal REGULATOR, GntR family K03710 K03710; GntR family transcriptional regulator
D RALTA_B0802 putative Transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D RALTA_B0086 putative transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RALTA_A1489 putative transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RALTA_A1241 putative transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RALTA_A1305 putative transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RALTA_B1318 Regulatory protein, GntR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RALTA_B0132 putative TRANSCRIPTIONAL REGULATOR, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RALTA_A1565 putative transcriptional regulator, gntR family (putative transcriptional repressor for uxu operon uxuR) K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D RALTA_B1590 putative Aminotransferase regulatory protein, HTH GntR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RALTA_B0828 putative TRANSCRIPTIONAl REGULATOR; GntR family; aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RALTA_A1416 putative TRANSCRIPTIONal REGULATOR, DNA-binding HTH domain (GntR) and aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RALTA_A0957 putative fused transcriptional regulator aminotransferase, GntR MocR domains K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D RALTA_A3186 acrR; transcriptional repressor for acridine efflux pump ACRAB, multidrug efflux system repressor (TetR/AcrR family) K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D RALTA_B0407 putative HTH-type transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D RALTA_A0153 putative transcriptional regulator of dUTPase subunit (TetR/AcrR family); similar to E.coli ttk K05501 slmA; TetR/AcrR family transcriptional regulator
D RALTA_B1431 putative transcriptional regulator, tetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D RALTA_B1063 putative transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RALTA_B0998 putative transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RALTA_B1065 putative transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RALTA_A2846 putative transcriptional regulator, TetR/AcrR families K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RALTA_A0872 putative transcriptional regulator, TetR family K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator
C Lrp/AsnC family
D RALTA_A2983 putative transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RALTA_A0799 lrp1; leucine-binding transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RALTA_B1417 lrp2; transcriptional regulator, AsnC/Lrp family (Leucine-responsive regulatory protein) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RALTA_B0906 putative TRANSCRIPTIONAL REGULATOR; AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RALTA_A3133 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RALTA_A2302 putative TRANSCRIPTIONal REGULATOR, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D pRALTA_0557 putative transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RALTA_A1543 putative transcriptional regulator, AsnC/Lrp family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
C MarR family
D RALTA_A0874 putative transcriptional regulator, MarR family K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D RALTA_B0168 ohrR; Organic hydroperoxide resistance transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RALTA_B0357 Putative transcriptional Regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D RALTA_A3122 putative Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RALTA_B2083 soxR; transcriptional activator for superoxide response; Fe-S center for redox-sensing (MerR family) K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
C Fur family
D RALTA_B0107 fur2; transcriptional repressor of iron transport (Fur family) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RALTA_A0139 putative transcriptional regulator, FUR family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RALTA_A2618 fur1; transcriptional repressor of iron transport (Fur family) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RALTA_B0618 putative transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
C IclR family
D RALTA_B1588 putative transcriptional regulator, IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RALTA_B2276 Putative transcription regulator, iclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RALTA_B0177 putative TRANSCRIPTIONAL REGULATOR, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RALTA_A0671 putative transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RALTA_A2212 putative transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
C CRP/FNR family
D RALTA_A0224 putative transcriptional regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RALTA_B0701 putative transcriptional regulator, Crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RALTA_B1105 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RALTA_B1147 putative transcriptional regulator; CRP/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RALTA_B0448 Putative transcription regulator, Crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D pRALTA_0082 putative transcriptional regulator; Crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RALTA_B1922 putative cyclic nucleotide-binding regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RALTA_A1857 fnr; O2-sensitive transcriptional regulator of ccoNOQP operon K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RALTA_B1341 putative transcriptional regulator, CAP CRP domains K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D RALTA_A1138 putative transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RALTA_A2987 nsrR; putative HTH transcriptional regulator; UPF0074 K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D pRALTA_0653 putative transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RALTA_B1892 putative transcriptional regulator, ArsR domain K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RALTA_A0662 conserved hypothetical protein; putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D RALTA_A1324 putative transcriptional regulator, ATP-binding kinase, Helix-turn-helix motif, Shikimate kinase motif K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D RALTA_B1614 putative transcriptional regulator, ATP-binding kinase, Helix-turn-helix motif, Shikimate kinase motif K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D RALTA_B0637 putative transcriptional regulator, XRE family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
D RALTA_B0104 conserved hypothetical protein; putative transmembrane protein K10947 K10947; PadR family transcriptional regulator
C Other families
D RALTA_B1121 putative transcriptional regulator, RpiR family, phosphosugar-binding domain K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RALTA_A1157 putative transcriptional regulator, RpiR/GlvR family (HTH and SIS (phosphosugar-binding) domains) K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RALTA_A0077 BIOTIN-[ACETYL-COA-CARBOXYLASE] SYNTHETASE K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RALTA_A0458 putative transcriptional regulator, FIS family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RALTA_A1598 prpR; transcriptional regulator; putative sigma-54 interacting regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D RALTA_A0166 putative transcriptional regulator, HTH cro/C1-type DNA-binding domain K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RALTA_A1625 putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RALTA_A0937 putative transcriptional regulator, XRE family, bacteriophage lambda repressor C1 like K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D RALTA_B0675 putative transcriptional regulator, Sigma-54 dependent family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RALTA_B0149 acoR; Acetoin catabolism regulatory protein, sigma54 interaction domain K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RALTA_B2089 norR; transcriptional regulator of anaerobic NO reduction and detoxification (EBP family; Sigma-54 interaction domain K12266 norR; anaerobic nitric oxide reductase transcription regulator
D pRALTA_0366 nifA; NifA transcriptional activator K02584 nifA; Nif-specific regulatory protein
D RALTA_A0628 modE; transcriptional repressor for molybdate uptake K02019 modE; molybdate transport system regulatory protein
D RALTA_B0429 putative Transcriptional regulator, HTH K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D RALTA_A3086 putA; multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase; pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D RALTA_A1456 conserved hypothetical protein; stress induced morphogen BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RALTA_B0005 parB2; plasmid partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D pRALTA_0306 parB3; Plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RALTA_A3100 parB1; exonuclease involved in chromosome partitioning, PARB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RALTA_A1113 hrcA; HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR, Negative regulator of class I heat shock protein K03705 hrcA; heat-inducible transcriptional repressor
D RALTA_B1610 paaX; Phenylacetic acid degradation operon negative regulatory protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RALTA_A3060 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D RALTA_A2395 pyrR; PyrR bifunctional protein: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase (UPRTase)] K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RALTA_A0890 putative prophage regulatory protein AlpA K07733 alpA; prophage regulatory protein
D RALTA_B0827 Putative transcriptional regulator; repressor, probable FMN-binding protein K07734 paiB; transcriptional regulator
D RALTA_A2397 conserved hypothetical protein, DUF179 K07735 algH; putative transcriptional regulator
D RALTA_A0137 conserved hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D RALTA_A2323 conserved hypothetical protein; putative regulator, zinc finger domain, ATP cone domain K07738 nrdR; transcriptional repressor NrdR
D RALTA_A1631 XpsR1; transcriptional regulator XpsR K19667 xpsR; transcriptional activator of eps genes
D RALTA_A2738 conserved hypothetical protein, UPF0040 COG2001 K03925 mraZ; transcriptional regulator MraZ
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0