+F Repair protein KO
#
DNA Repair and Recombination Proteins - Cupriavidus taiwanensis
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D RALTA_A0546 putative METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RALTA_B2281 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RALTA_A2399 phr; deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E RALTA_A2777 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E RALTA_A0323 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E RALTA_A1128 nth; endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on 5-formyluracil and 5-hydroxymethyluracil K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D Long Patch-BER factors
E DNA polymerase delta complex
E DNA polymerase epsilon complex
D Short Patch-BER factors
D Other BER factors
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
E Cul4-DDB2 complex
E NER4 complex
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
E Cul4-CSA complex
E Other TCR factor
D TFIIH complex
E RALTA_B1170 ATP-dependent DNA helicase, DEAD_2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RPA (replication factor A)
D Other NER factors
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D MutL homologs
D DNA polymerase delta complex
D RPA (replication factor A)
D RFC (replication factor C)
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
D BRCA complex
D RecA family proteins
D Rad52 family proteins
D Rad54 family proteins
D RecQ family DNA helicases
D Bloom's syndrome complex (BTR)
D RPA (replication factor A)
D Protein phosphatase 4
D AP-5 complex
D SMC5-SMC6 complex
D Other HR factors
C NHEJ (non-homologous end-joining)
D DNA-PK complex
D MRX complex
D DNA Ligase 4 complex
D X-family DNA polymerases
D Other NHEJ factors
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C B-family DNA polymerases
C A-family DNA polymerase
C Rad6 epistasis group
C Other TLS factors
B Check point factors
C Rad9-Hus1-Rad1 complex
C HRAD17(Rad24)-RFC complex
C Rad17-Mec3-Ddc1 complex
C FPC (fork protection complex)
C Triple T complex
C BAG6-UBL4A-GET4 complex
C Other check point factors
B Other factors with a suspected DNA repair function
C DNA polymerases
C Nucleases
C Helicases
C PSO4 complex
C Modulation of nucleotide pools
D RALTA_A2717 mutT; MUTATOR MUTT PROTEIN (7, 8-DIHYDRO-8-OXOGUANINE-TRIPHOSPHATASE) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RALTA_A2524 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D RALTA_A0546 putative METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RALTA_B2281 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RALTA_B0916 ada; O6-methylguanine-DNA methyltransferase; transcriptional regulator of DNA repair (AraC/Xyl family) (N-terminal); bifunctional K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RALTA_A2399 phr; deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RALTA_B2152 alkB; Alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
C BER (base exicision repair)
D DNA glycosylases
E RALTA_A2777 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E RALTA_A0578 putative Uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
E RALTA_A1737 putative uracil-DNA glycosylase,phage-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
E RALTA_A1200 putative DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E RALTA_B2282 Putative methylated-DNA-protein-cysteine methyltransferase, DNA binding domain K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E RALTA_A0323 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E RALTA_A3010 tag; 3-methyl-adenine DNA glycosylase I, constitutive K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E RALTA_A0321 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase/DNA lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E RALTA_A1128 nth; endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on 5-formyluracil and 5-hydroxymethyluracil K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E RALTA_A1287 xthA; EXODEOXYRIBONUCLEASE III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
E RALTA_A0167 putative EXODEOXYRIBONUCLEASE III/endonuclease/phosphatase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
E RALTA_B2077 Exodeoxyribonuclease III, AP endonuclease, family 1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
E RALTA_A1151 recJ; ssDNA exonuclease, 5'--> 3'-specific, Mg-dependent K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNA ligase
E RALTA_A1696 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DNA polymerase I
E RALTA_A2244 polA; DNA polymerase A; 5'->3' exonuclease; 3'->5' polymerase; 3'->5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E RALTA_B1379 uvrA2; Excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
E RALTA_A0344 uvrA1; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC K03701 uvrA; excinuclease ABC subunit A
E RALTA_A1133 uvrB; ATP-dependent DNA excision repair enzyme, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
E RALTA_A2048 uvrC; UvrABC system protein C (Excinuclease ABC subunit C) K03703 uvrC; excinuclease ABC subunit C
E RALTA_A0247 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
E RALTA_A2249 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
E RALTA_A2244 polA; DNA polymerase A; 5'->3' exonuclease; 3'->5' polymerase; 3'->5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
E RALTA_A1696 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F RALTA_A2958 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F RALTA_A2957 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F RALTA_A2918 rpoA; RNA polymerase, alpha subunit; RNA polymerase alpha chain family K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F RALTA_A0951 rpoZ; DNA-DIRECTED RNA POLYMERASE (OMEGA CHAIN) PROTEIN K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
F RALTA_A1369 mfd; transcription-repair ATP-dependent coupling factor, helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E RALTA_A1188 mutS; methyl-directed mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D Molecular matchmaker
E RALTA_A2544 mutL; methyl-directed mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D Strand discrimination factor
D DNA exonucleases
E RALTA_A0565 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
E RALTA_A2237 xseB; Exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DNA polymerase III holoenzyme
E RALTA_A0811 dnaE1; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E RALTA_A0002 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E RALTA_A2463 holC; DNA POLYMERASE III, CHI SUBUNIT K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E RALTA_A2613 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E RALTA_A1496 holB; DNA POLYMERASE III, DELTA' SUBUNIT K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E RALTA_A1998 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E RALTA_B0605 DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (modular protein) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E RALTA_A1962 putative membrane linked exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E RALTA_A1935 dnaX; DNA POLYMERASE III (SUBUNITS TAU AND GAMMA) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNA ligase
E RALTA_A1696 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Other MMR factors
E RALTA_A0247 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
E RALTA_A2249 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
E RALTA_A0346 ssb1; ssDNA-binding protein, controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
E pRALTA_0188 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E RALTA_A0499 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
E RALTA_A0454 ruvA; subunit A of RuvABC Holliday junction resolvasome, regulatory subunit K03550 ruvA; holliday junction DNA helicase RuvA
E RALTA_A0453 ruvB; ATP-dependent DNA helicase, subunit B of RuvABC Holliday junction resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
E RALTA_A0456 ruvC; endodeoxyribonuclease, subunit C of RuvABC Holliday junction resolvasome K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
E RALTA_A3087 priA; primosomal protein N' (factor Y), ATP-dependent DNA helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
E RALTA_A1822 conserved hypothetical protein K02686 priB; primosomal replication protein N
E RALTA_B0204 sbcC; Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
E pRALTA_0154 putative ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
E RALTA_B0203 sbcD; Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
E pRALTA_0156 putative DNA exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D RecFOR pathway proteins
E RALTA_A0499 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
E RALTA_A1733 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms
E RALTA_A2586 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
E pRALTA_0109 conserved hypothetical protein; putative DNA interacting protein (helicase/transcriptional regulator) K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
E RALTA_A1151 recJ; ssDNA exonuclease, 5'--> 3'-specific, Mg-dependent K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
E RALTA_A2054 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
E RALTA_A1933 recR; Recombination protein recR K06187 recR; recombination protein RecR
E RALTA_A1111 recN; recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
E RALTA_A2662 rdgC; Recombination associated protein K03554 rdgC; recombination associated protein RdgC
E RALTA_A0454 ruvA; subunit A of RuvABC Holliday junction resolvasome, regulatory subunit K03550 ruvA; holliday junction DNA helicase RuvA
E RALTA_A0453 ruvB; ATP-dependent DNA helicase, subunit B of RuvABC Holliday junction resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
E RALTA_A0456 ruvC; endodeoxyribonuclease, subunit C of RuvABC Holliday junction resolvasome K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AddAB pathway proteins
E RALTA_A1937 Putative helicase, uvrD subfamily K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
E RALTA_A1938 Putative helicase, C_term RecB family exonuclease K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Other HR factor
D Archaeal homologous recombinant proteins
E RALTA_B0204 sbcC; Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
E pRALTA_0154 putative ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
E RALTA_B0203 sbcD; Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
E pRALTA_0156 putative DNA exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
E RALTA_A0860 putative enzyme, nucleoside triP hydrolase domain K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
E RALTA_B0289 Putative Ku domain containing protein K10979 ku; DNA end-binding protein Ku
E RALTA_B2123 ATP-dependent DNA helicase, Ku domain K10979 ku; DNA end-binding protein Ku
E pRALTA_0093 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
E RALTA_B2120 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
E RALTA_B0290 Putative ATP dependent DNA ligase, eukaryotic type primase C-term domain K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F RALTA_A0770 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F RALTA_A0003 gyrB; DNA gyrase, subunit B (type II topoisomerase) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
F RALTA_B2106 putative Eukaryotic-like DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
E Supressor
F RALTA_A3140 hupB1; DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
F RALTA_B1140 hupB2; DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
F pRALTA_0178 hupB3; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
F RALTA_A1151 recJ; ssDNA exonuclease, 5'--> 3'-specific, Mg-dependent K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
F RALTA_A2054 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
F RALTA_A1933 recR; Recombination protein recR K06187 recR; recombination protein RecR
F RALTA_A1696 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
E Facilitator
F RALTA_A0458 putative transcriptional regulator, FIS family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
F RALTA_A1267 ihfA; integration host factor (IHF), alpha subunit K04764 ihfA; integration host factor subunit alpha
F RALTA_A0780 ihfB; Integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
E Supressor
F RALTA_A2956 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F RALTA_B1379 uvrA2; Excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
F RALTA_A0344 uvrA1; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC K03701 uvrA; excinuclease ABC subunit A
F RALTA_A1133 uvrB; ATP-dependent DNA excision repair enzyme, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
F pRALTA_0510 Histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
F RALTA_B0237 Histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
F pRALTA_0660 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
F pRALTA_0666 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
F RALTA_B1460 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
F RALTA_B2034 putative H-NS histone-like protein K03746 hns; DNA-binding protein H-NS
F pRALTA_0669 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
F pRALTA_0133 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D RALTA_A3142 dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
C Other SOS response factors
D RALTA_A0499 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D RALTA_A1825 lexA; transcriptional LExA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RALTA_A1111 recN; recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D RALTA_A1553 polB; DNA polymerase II and 3'-> 5' exonuclease, DNA polymerase type-B family K02336 polB; DNA polymerase II [EC:2.7.7.7]
D pRALTA_0101 conserved hypothetical protein; putative DNA recombinase; putative partial gene K14160 imuA; protein ImuA
D RALTA_B0872 imuA; required for the error-prone processing of DNA lesions along with dnaE2 and imuB K14160 imuA; protein ImuA
D pRALTA_0100 putative DNA polymerase, Y family K14161 imuB; protein ImuB
D RALTA_B0873 imuB; required for the error-prone processing of DNA lesions along with dnaE2 and imuA K14161 imuB; protein ImuB
D pRALTA_0099 dnaE3; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RALTA_B0874 dnaE2; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RALTA_A0346 ssb1; ssDNA-binding protein, controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D pRALTA_0188 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RALTA_A3210 dinD; DNA-damage-inducible protein, part of SOS response K14623 dinD; DNA-damage-inducible protein D
D RALTA_A0500 putative RecA REGULATORY PROTEIN RECX, COG2137 K03565 recX; regulatory protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
D RALTA_A3072 rep; DNA helicase and single-stranded DNA-dependent ATPase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D RALTA_A1345 putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RALTA_B1595 ATP-dependent DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
C Modulation of nucleotide pools
D RALTA_A2717 mutT; MUTATOR MUTT PROTEIN (7, 8-DIHYDRO-8-OXOGUANINE-TRIPHOSPHATASE) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RALTA_A2524 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RALTA_A1936 Putative ribonucleotide reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RALTA_A2686 nrdA; Ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RALTA_A2685 nrdB; ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024