+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Chlamydia trachomatis RC-L2/55
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D CTRC55_01535 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C CTRC55_02180 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C CTRC55_02125 dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C CTRC55_00510 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C CTRC55_04445 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
C CTRC55_01650 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D CTRC55_01845 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CTRC55_02575 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CTRC55_01405 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CTRC55_00260 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
C 23S rRNA modification factors
D CTRC55_02110 N6-adenine-specific DNA methylase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CTRC55_03835 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CTRC55_00555 tRNA pseudouridine synthase A K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CTRC55_03485 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
B rRNA processing factors
C CTRC55_01535 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C CTRC55_04295 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
C CTRC55_00955 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C CTRC55_03720 GTP-binding protein Der K03977 engA; GTPase
C CTRC55_02180 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C CTRC55_01980 putative nucleotide-binding protein K03665 hflX; GTPase
B Other maturation factors
C CTRC55_00720 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C CTRC55_00500 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C CTRC55_04080 hypothetical protein K09710 ybeB; ribosome-associated protein
C CTRC55_02210 hypothetical protein K07042 ybeY; probable rRNA maturation factor
C CTRC55_00485 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C CTRC55_04305 hypothetical protein K07040 yceD; DUF177 domain-containing protein
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024