+D Transcription factors KO #

  Transcription Factors - Chloroherpeton thalassium

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Stork head/winged helix factors C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D Ctha_2629 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D Ctha_0780 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D Ctha_2308 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator C LysR family D Ctha_1838 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family C LacI family C GntR family C TetR/AcrR family D Ctha_1319 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Ctha_2721 transcriptional regulator, TetR family K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon C Lrp/AsnC family D Ctha_0043 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D Ctha_2502 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor C MerR family D Ctha_1414 DNA binding domain protein, excisionase family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D Ctha_1302 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Ctha_2028 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Ctha_2439 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D Ctha_1051 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Ctha_1300 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Ctha_2193 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Ctha_2427 cyclic nucleotide-binding protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family C ArsR family D Ctha_1194 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family C PadR family C Other families D Ctha_0938 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Ctha_0630 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Ctha_1655 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein D Ctha_1837 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D Ctha_1482 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D Ctha_2016 TOBE domain protein K02019 modE; molybdate transport system regulatory protein D Ctha_0846 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D Ctha_2650 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ctha_2281 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Ctha_1822 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Ctha_0667 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D Ctha_0187 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator D Ctha_0755 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 3, 2025 #
Classification taken and modified from TRANSFAC 7.0