+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Cronobacter universalis</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
C    Subtype I-A factors
C    Subtype I-B factors
C    Subtype I-C factors
C    Subtype I-D factors
C    Subtype I-E factors
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      AFK65_18245 DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      AFK65_12585 DNA cytosine methylase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
B  Type III R-M system
B  Type IV R-M system
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
D      AFK65_17450 Hok/gef cell toxic protein	K18921 hokB; protein HokB 
D      AFK65_18990 small toxic polypeptide	K18921 hokB; protein HokB 
D      AFK65_00030 small toxic polypeptide	K18921 hokB; protein HokB 
D      AFK65_04625 protein hokB	K18921 hokB; protein HokB 
C    SymE-SymR
D      AFK65_02820 endoribonuclease	K19048 symE; toxic protein SymE 
C    Ldr-Rdl
C    TisB-IstR
D      AFK65_00130 toxic peptide TisB	K19148 tisB; small toxic protein TisB 
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
C    RelE/StbE-RelB/StbD
D      AFK65_14320 hypothetical protein	K06218 relE; mRNA interferase RelE/StbE 
C    YafQ-dinJ
C    YoeB-YefM
C    HipA-HipB
D      AFK65_20200 toxin HipA	K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] 
D      AFK65_20195 transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB 
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
D      AFK65_05220 transcriptional regulator	K05839 hha; haemolysin expression modulating protein 
D      AFK65_05225 Hha toxicity attenuator	K19162 tomB; hha toxicity modulator TomB 
C    PspC-PspB
D      AFK65_10925 transcriptional regulator	K03973 pspC; phage shock protein C 
D      AFK65_10930 pspB; phage-shock protein	K03970 pspB; phage shock protein B 
C    CcdB-CcdA
D      AFK65_18790 cytotoxin	K19163 ccdB; toxin CcdB 
D      AFK65_18795 antitoxin	K19164 ccdA; antitoxin CcdA 
C    ParE-ParD
D      AFK65_18730 addiction module antitoxin	K19092 parE1_3_4; toxin ParE1/3/4 
C    Doc-Phd
D      AFK65_18545 toxin	K07341 doc; death on curing protein 
D      AFK65_18550 antitoxin	K19165 phd; antitoxin Phd 
C    HigB-HigA
D      AFK65_20075 cytoplasmic protein	K19166 higB; mRNA interferase HigB [EC:3.1.-.-] 
D      AFK65_09870 Killer protein	K07334 higB-1; toxin HigB-1 
D      AFK65_08315 hypothetical protein	K07334 higB-1; toxin HigB-1 
D      AFK65_20070 XRE family transcriptional regulator	K18831 higA; HTH-type transcriptional regulator / antitoxin HigA 
D      AFK65_08320 XRE family transcriptional regulator	K21498 higA-1; antitoxin HigA-1 
D      AFK65_09875 XRE family transcriptional regulator	K21498 higA-1; antitoxin HigA-1 
C    MqsR-MqsA
C    VapC-VapB
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
C    BC_0920-BC_0921
C    Type II TA system related factors
D      AFK65_02550 toxin-antitoxin biofilm protein TabA	K19334 tabA; biofilm protein TabA 
D      AFK65_07550 bssS; transcriptional regulator	K12148 bssS; biofilm regulator BssS 
D      AFK65_07820 multiple stress resistance protein BhsA	K12151 bhsA; multiple stress resistance protein BhsA 
D      AFK65_03615 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ 
D      AFK65_01840 rod shape-determining protein MreB	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      AFK65_16175 DNA topoisomerase IV	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
D      AFK65_16240 DNA topoisomerase IV	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
D      AFK65_14150 gltX; glutamine--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
D      AFK65_15930 hypothetical protein	K19168 cptA; toxin CptA 
D      AFK65_15935 hypothetical protein	K09159 cptB; antitoxin CptB 
B  Type V TA system
C    GhoT-GhoS
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    AFK65_14710 cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: November 7, 2023