+F Repair protein KO #

  DNA Repair and Recombination Proteins - Corynebacterium urogenitale

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D CUROG_04165 adaB; Methylated-DNA--protein-cysteine methyltransferase, inducible K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CUROG_02815 phrB; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E CUROG_06240 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CUROG_09720 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex E CUROG_02265 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D CUROG_06550 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CUROG_05535 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D CUROG_04165 adaB; Methylated-DNA--protein-cysteine methyltransferase, inducible K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CUROG_02815 phrB; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E CUROG_06240 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CUROG_00715 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E CUROG_02005 nei1; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E CUROG_06195 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E CUROG_02460 nei2; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] E CUROG_09720 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E CUROG_01615 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] E CUROG_08345 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RecJ D DNA ligase E CUROG_06630 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E CUROG_04195 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E CUROG_04285 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A E CUROG_05625 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A E CUROG_04260 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B E CUROG_05110 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C E CUROG_07835 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUROG_07900 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUROG_07910 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUROG_04195 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E CUROG_06630 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F CUROG_08945 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F CUROG_08940 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F CUROG_08675 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F CUROG_05175 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases E CUROG_07190 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E CUROG_07195 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E CUROG_03960 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E CUROG_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E CUROG_03105 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E CUROG_09625 dnaX1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E CUROG_04010 ligA1; DNA ligase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E CUROG_06410 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E CUROG_06590 polC3; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E CUROG_09885 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E CUROG_09920 dnaX2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E CUROG_06630 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E CUROG_07835 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUROG_07900 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUROG_07910 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E CUROG_02885 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein E CUROG_10340 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E CUROG_05735 recombinase A K03553 recA; recombination protein RecA E CUROG_05365 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E CUROG_05360 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E CUROG_05370 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E CUROG_05160 priA2; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D RecFOR pathway proteins E CUROG_05735 recombinase A K03553 recA; recombination protein RecA E CUROG_01865 hypothetical protein K04485 radA; DNA repair protein RadA/Sms E CUROG_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF E CUROG_06230 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E CUROG_03300 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E CUROG_09910 recR; Recombination protein RecR K06187 recR; recombination protein RecR E CUROG_04420 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E CUROG_05365 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E CUROG_05360 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E CUROG_05370 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F CUROG_00055 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F CUROG_00035 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F CUROG_09640 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F CUROG_03300 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F CUROG_09910 recR; Recombination protein RecR K06187 recR; recombination protein RecR F CUROG_06630 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F CUROG_04285 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A F CUROG_05625 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A F CUROG_04260 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D CUROG_03905 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] C Other SOS response factors D CUROG_05735 recombinase A K03553 recA; recombination protein RecA D CUROG_05655 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CUROG_04420 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CUROG_08485 DNA polymerase IV K14161 imuB; protein ImuB D CUROG_08450 dnaE2; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D CUROG_02885 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CUROG_10340 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CUROG_05730 recX; Regulatory protein RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D CUROG_02730 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CUROG_02455 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] C Modulation of nucleotide pools D CUROG_06550 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CUROG_06265 mutT1; Putative mutator protein MutT4 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D CUROG_04450 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D CUROG_05535 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CUROG_02680 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CUROG_02690 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024